| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-156 | -3.609e+02 | 0.0000 | 315.0 | 66.74% | 5768.8 | 13.30% | motif file (matrix) |
svg |
| 2 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-146 | -3.376e+02 | 0.0000 | 285.0 | 60.38% | 4763.5 | 10.98% | motif file (matrix) |
svg |
| 3 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-143 | -3.298e+02 | 0.0000 | 326.0 | 69.07% | 7040.7 | 16.23% | motif file (matrix) |
svg |
| 4 |
| Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer | 1e-136 | -3.137e+02 | 0.0000 | 265.0 | 56.14% | 4300.6 | 9.91% | motif file (matrix) |
svg |
| 5 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-122 | -2.826e+02 | 0.0000 | 268.0 | 56.78% | 5037.6 | 11.61% | motif file (matrix) |
svg |
| 6 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-121 | -2.788e+02 | 0.0000 | 297.0 | 62.92% | 6631.9 | 15.29% | motif file (matrix) |
svg |
| 7 |
| TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer | 1e-118 | -2.725e+02 | 0.0000 | 338.0 | 71.61% | 9356.4 | 21.57% | motif file (matrix) |
svg |
| 8 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-110 | -2.549e+02 | 0.0000 | 208.0 | 44.07% | 2985.4 | 6.88% | motif file (matrix) |
svg |
| 9 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-108 | -2.494e+02 | 0.0000 | 231.0 | 48.94% | 4013.2 | 9.25% | motif file (matrix) |
svg |
| 10 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-107 | -2.477e+02 | 0.0000 | 269.0 | 56.99% | 5882.1 | 13.56% | motif file (matrix) |
svg |
| 11 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-105 | -2.437e+02 | 0.0000 | 195.0 | 41.31% | 2681.7 | 6.18% | motif file (matrix) |
svg |
| 12 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-89 | -2.066e+02 | 0.0000 | 89.0 | 18.86% | 350.8 | 0.81% | motif file (matrix) |
svg |
| 13 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-87 | -2.007e+02 | 0.0000 | 208.0 | 44.07% | 3999.4 | 9.22% | motif file (matrix) |
svg |
| 14 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-83 | -1.930e+02 | 0.0000 | 211.0 | 44.70% | 4313.7 | 9.94% | motif file (matrix) |
svg |
| 15 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-83 | -1.919e+02 | 0.0000 | 213.0 | 45.13% | 4434.4 | 10.22% | motif file (matrix) |
svg |
| 16 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-78 | -1.798e+02 | 0.0000 | 375.0 | 79.45% | 16102.1 | 37.12% | motif file (matrix) |
svg |
| 17 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-76 | -1.768e+02 | 0.0000 | 237.0 | 50.21% | 6091.1 | 14.04% | motif file (matrix) |
svg |
| 18 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-76 | -1.751e+02 | 0.0000 | 200.0 | 42.37% | 4227.5 | 9.75% | motif file (matrix) |
svg |
| 19 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-64 | -1.486e+02 | 0.0000 | 198.0 | 41.95% | 4844.2 | 11.17% | motif file (matrix) |
svg |
| 20 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-63 | -1.451e+02 | 0.0000 | 153.0 | 32.42% | 2825.9 | 6.51% | motif file (matrix) |
svg |
| 21 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-58 | -1.346e+02 | 0.0000 | 261.0 | 55.30% | 9154.7 | 21.10% | motif file (matrix) |
svg |
| 22 |
| Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer | 1e-54 | -1.244e+02 | 0.0000 | 310.0 | 65.68% | 13347.4 | 30.77% | motif file (matrix) |
svg |
| 23 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-53 | -1.232e+02 | 0.0000 | 161.0 | 34.11% | 3729.1 | 8.60% | motif file (matrix) |
svg |
| 24 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-50 | -1.159e+02 | 0.0000 | 239.0 | 50.64% | 8515.4 | 19.63% | motif file (matrix) |
svg |
| 25 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-49 | -1.140e+02 | 0.0000 | 241.0 | 51.06% | 8742.3 | 20.15% | motif file (matrix) |
svg |
| 26 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-41 | -9.473e+01 | 0.0000 | 168.0 | 35.59% | 5046.8 | 11.63% | motif file (matrix) |
svg |
| 27 |
| Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-40 | -9.281e+01 | 0.0000 | 237.0 | 50.21% | 9557.5 | 22.03% | motif file (matrix) |
svg |
| 28 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-38 | -8.788e+01 | 0.0000 | 140.0 | 29.66% | 3781.1 | 8.72% | motif file (matrix) |
svg |
| 29 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-33 | -7.778e+01 | 0.0000 | 274.0 | 58.05% | 13338.4 | 30.75% | motif file (matrix) |
svg |
| 30 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-31 | -7.292e+01 | 0.0000 | 61.0 | 12.92% | 791.1 | 1.82% | motif file (matrix) |
svg |
| 31 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-30 | -7.033e+01 | 0.0000 | 180.0 | 38.14% | 6919.6 | 15.95% | motif file (matrix) |
svg |
| 32 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-30 | -6.911e+01 | 0.0000 | 120.0 | 25.42% | 3417.6 | 7.88% | motif file (matrix) |
svg |
| 33 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-29 | -6.823e+01 | 0.0000 | 101.0 | 21.40% | 2494.2 | 5.75% | motif file (matrix) |
svg |
| 34 |
| EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer | 1e-27 | -6.260e+01 | 0.0000 | 133.0 | 28.18% | 4410.3 | 10.17% | motif file (matrix) |
svg |
| 35 |
| Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-26 | -6.188e+01 | 0.0000 | 220.0 | 46.61% | 10267.5 | 23.67% | motif file (matrix) |
svg |
| 36 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-24 | -5.667e+01 | 0.0000 | 110.0 | 23.31% | 3379.6 | 7.79% | motif file (matrix) |
svg |
| 37 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-24 | -5.582e+01 | 0.0000 | 103.0 | 21.82% | 3038.8 | 7.01% | motif file (matrix) |
svg |
| 38 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-24 | -5.564e+01 | 0.0000 | 111.0 | 23.52% | 3478.7 | 8.02% | motif file (matrix) |
svg |
| 39 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-23 | -5.405e+01 | 0.0000 | 145.0 | 30.72% | 5581.2 | 12.87% | motif file (matrix) |
svg |
| 40 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-20 | -4.761e+01 | 0.0000 | 97.0 | 20.55% | 3061.9 | 7.06% | motif file (matrix) |
svg |
| 41 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-19 | -4.512e+01 | 0.0000 | 113.0 | 23.94% | 4103.0 | 9.46% | motif file (matrix) |
svg |
| 42 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-17 | -4.135e+01 | 0.0000 | 42.0 | 8.90% | 697.2 | 1.61% | motif file (matrix) |
svg |
| 43 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-16 | -3.861e+01 | 0.0000 | 329.0 | 69.70% | 21890.7 | 50.46% | motif file (matrix) |
svg |
| 44 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-15 | -3.608e+01 | 0.0000 | 99.0 | 20.97% | 3765.1 | 8.68% | motif file (matrix) |
svg |
| 45 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.566e+01 | 0.0000 | 52.0 | 11.02% | 1247.2 | 2.88% | motif file (matrix) |
svg |
| 46 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-14 | -3.332e+01 | 0.0000 | 116.0 | 24.58% | 5025.5 | 11.58% | motif file (matrix) |
svg |
| 47 |
| Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer | 1e-13 | -3.199e+01 | 0.0000 | 186.0 | 39.41% | 10209.9 | 23.54% | motif file (matrix) |
svg |
| 48 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-13 | -3.006e+01 | 0.0000 | 150.0 | 31.78% | 7673.0 | 17.69% | motif file (matrix) |
svg |
| 49 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-11 | -2.581e+01 | 0.0000 | 121.0 | 25.64% | 5972.8 | 13.77% | motif file (matrix) |
svg |
| 50 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-10 | -2.354e+01 | 0.0000 | 198.0 | 41.95% | 12150.1 | 28.01% | motif file (matrix) |
svg |
| 51 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-9 | -2.195e+01 | 0.0000 | 245.0 | 51.91% | 16375.6 | 37.75% | motif file (matrix) |
svg |
| 52 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-8 | -2.028e+01 | 0.0000 | 115.0 | 24.36% | 6079.0 | 14.01% | motif file (matrix) |
svg |
| 53 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-8 | -1.955e+01 | 0.0000 | 122.0 | 25.85% | 6674.9 | 15.39% | motif file (matrix) |
svg |
| 54 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-8 | -1.928e+01 | 0.0000 | 20.0 | 4.24% | 354.8 | 0.82% | motif file (matrix) |
svg |
| 55 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-8 | -1.843e+01 | 0.0000 | 111.0 | 23.52% | 5985.4 | 13.80% | motif file (matrix) |
svg |
| 56 |
| Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-7 | -1.746e+01 | 0.0000 | 151.0 | 31.99% | 9170.8 | 21.14% | motif file (matrix) |
svg |
| 57 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-6 | -1.579e+01 | 0.0000 | 30.0 | 6.36% | 912.5 | 2.10% | motif file (matrix) |
svg |
| 58 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.542e+01 | 0.0000 | 50.0 | 10.59% | 2079.1 | 4.79% | motif file (matrix) |
svg |
| 59 |
| TATA-Box(TBP)/Promoter/Homer | 1e-6 | -1.438e+01 | 0.0000 | 97.0 | 20.55% | 5418.2 | 12.49% | motif file (matrix) |
svg |
| 60 |
| PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.419e+01 | 0.0000 | 120.0 | 25.42% | 7190.4 | 16.58% | motif file (matrix) |
svg |
| 61 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-5 | -1.277e+01 | 0.0000 | 47.0 | 9.96% | 2088.0 | 4.81% | motif file (matrix) |
svg |
| 62 |
| Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer | 1e-5 | -1.269e+01 | 0.0000 | 44.0 | 9.32% | 1903.2 | 4.39% | motif file (matrix) |
svg |
| 63 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-5 | -1.258e+01 | 0.0000 | 17.0 | 3.60% | 405.2 | 0.93% | motif file (matrix) |
svg |
| 64 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-5 | -1.235e+01 | 0.0000 | 49.0 | 10.38% | 2252.9 | 5.19% | motif file (matrix) |
svg |
| 65 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-5 | -1.227e+01 | 0.0000 | 105.0 | 22.25% | 6301.4 | 14.53% | motif file (matrix) |
svg |
| 66 |
| Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer | 1e-5 | -1.207e+01 | 0.0000 | 89.0 | 18.86% | 5112.4 | 11.79% | motif file (matrix) |
svg |
| 67 |
| Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer | 1e-5 | -1.184e+01 | 0.0000 | 85.0 | 18.01% | 4843.8 | 11.17% | motif file (matrix) |
svg |
| 68 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.124e+01 | 0.0001 | 59.0 | 12.50% | 3034.3 | 6.99% | motif file (matrix) |
svg |
| 69 |
| Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-4 | -1.108e+01 | 0.0001 | 13.0 | 2.75% | 277.4 | 0.64% | motif file (matrix) |
svg |
| 70 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -1.083e+01 | 0.0001 | 25.0 | 5.30% | 884.6 | 2.04% | motif file (matrix) |
svg |
| 71 |
| SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer | 1e-4 | -1.077e+01 | 0.0001 | 33.0 | 6.99% | 1358.0 | 3.13% | motif file (matrix) |
svg |
| 72 |
| LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer | 1e-4 | -1.048e+01 | 0.0002 | 110.0 | 23.31% | 6965.6 | 16.06% | motif file (matrix) |
svg |
| 73 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-4 | -9.510e+00 | 0.0004 | 21.0 | 4.45% | 732.5 | 1.69% | motif file (matrix) |
svg |
| 74 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-3 | -9.087e+00 | 0.0007 | 81.0 | 17.16% | 4924.3 | 11.35% | motif file (matrix) |
svg |
| 75 |
| Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer | 1e-3 | -8.243e+00 | 0.0015 | 82.0 | 17.37% | 5134.6 | 11.84% | motif file (matrix) |
svg |
| 76 |
| Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer | 1e-3 | -7.631e+00 | 0.0028 | 18.0 | 3.81% | 667.6 | 1.54% | motif file (matrix) |
svg |
| 77 |
| RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-3 | -7.229e+00 | 0.0041 | 15.0 | 3.18% | 520.1 | 1.20% | motif file (matrix) |
svg |
| 78 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -6.931e+00 | 0.0055 | 30.0 | 6.36% | 1477.7 | 3.41% | motif file (matrix) |
svg |
| 79 |
| DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer | 1e-2 | -6.401e+00 | 0.0092 | 6.0 | 1.27% | 113.1 | 0.26% | motif file (matrix) |
svg |
| 80 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -6.348e+00 | 0.0096 | 24.0 | 5.08% | 1131.9 | 2.61% | motif file (matrix) |
svg |
| 81 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -6.029e+00 | 0.0131 | 34.0 | 7.20% | 1851.2 | 4.27% | motif file (matrix) |
svg |
| 82 |
| Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer | 1e-2 | -5.646e+00 | 0.0190 | 71.0 | 15.04% | 4732.5 | 10.91% | motif file (matrix) |
svg |
| 83 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.381e+00 | 0.0244 | 98.0 | 20.76% | 6992.9 | 16.12% | motif file (matrix) |
svg |
| 84 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.268e+00 | 0.0270 | 139.0 | 29.45% | 10494.4 | 24.19% | motif file (matrix) |
svg |
| 85 |
| ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer | 1e-2 | -5.244e+00 | 0.0273 | 79.0 | 16.74% | 5461.6 | 12.59% | motif file (matrix) |
svg |
| 86 |
| CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer | 1e-2 | -5.112e+00 | 0.0308 | 37.0 | 7.84% | 2189.2 | 5.05% | motif file (matrix) |
svg |
| 87 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -4.973e+00 | 0.0350 | 31.0 | 6.57% | 1766.9 | 4.07% | motif file (matrix) |
svg |