Information for 10-CYTCCTCCTS (Motif 10)

A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
Reverse Opposite:
T A C G C G T A C A T G T A C G C G T A C T A G C T A G C G T A C T G A C T A G
p-value:1e-3062
log p-value:-7.053e+03
Information Content per bp:1.576
Number of Target Sequences with motif42449.0
Percentage of Target Sequences with motif65.75%
Number of Background Sequences with motif107644.3
Percentage of Background Sequences with motif39.91%
Average Position of motif in Targets262.1 +/- 197.0bp
Average Position of motif in Background233.4 +/- 288.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PF10_0068(RRM)/Plasmodium_falciparum-RNCMPT00199-PBM/HughesRNA

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-TTCCTCCN-
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A G C T A C G T A G T C A G T C G C A T A G T C A G T C G C T A A C G T

NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-TTCCTCC--
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T G A C T C G A T A G T C A G T C C G A T A G T C A G T C A C G T A C G T

SF2(RRM)/Drosophila_melanogaster-RNCMPT00066-PBM/HughesRNA

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:CYTCCTCCTS
--TCCTCCN-
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A C G T A G C T A G T C A G T C C G A T A G T C A G T C G A C T A C G T

TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----CYTCCTCCTS-
NNNWCCTCCTCHHNN
 A C G T A C G T A C G T A C G T A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C A C G T
C A G T G C A T G A T C G C A T G A T C G A T C G A C T G T A C G T A C G A C T G A T C G A C T G A C T A G T C G A T C

SRSF1(RRM)/Homo_sapiens-RNCMPT00163-PBM/HughesRNA

Match Rank:5
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-CTCCTCC--
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A T G C A C G T A G T C A G T C A G C T A G T C A G T C A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-NTCCTCC--
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A C G T A G C T A G T C T G A C A C G T A G T C A G T C A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CYTCCTCCTS
NNCTTCCTGN--
 A C G T A C G T A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00106-PBM/HughesRNA

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-NTCCTCC--
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A C T G A G C T A G T C T G A C C G A T A G T C A G T C A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00108-PBM/HughesRNA

Match Rank:9
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-NTCCTCC--
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A G T C A G C T A G T C T A G C A C G T A G T C A G T C A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00109-PBM/HughesRNA

Match Rank:10
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CYTCCTCCTS
-NTCCTCC--
 A G T C G A C T G C A T A G T C G A T C G C A T A T G C G T A C G C A T A T G C
A C G T A G C T A G C T A G T C T A G C A C G T A G T C A G T C A C G T A C G T