Information for 11-KTKTKTKTKTTT (Motif 12)

C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
Reverse Opposite:
T G C A T G C A T C G A T G A C T G C A T G C A T G C A G T C A T G C A T G C A T G C A G T C A
p-value:1e-2847
log p-value:-6.556e+03
Information Content per bp:1.583
Number of Target Sequences with motif18769.0
Percentage of Target Sequences with motif29.07%
Number of Background Sequences with motif27795.7
Percentage of Background Sequences with motif10.31%
Average Position of motif in Targets261.8 +/- 192.6bp
Average Position of motif in Background225.0 +/- 256.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:KTKTKTKTKTTT
-TTTTTTTTTT-
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SeqBias: polyA-repeat

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:KTKTKTKTKTTT
-TTTTTTTTTT-
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SeqBias: CA-repeat

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:KTKTKTKTKTTT
-TGTGTGTGTG-
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA

Match Rank:4
Score:0.76
Offset:3
Orientation:forward strand
Alignment:KTKTKTKTKTTT
---TGTGTGTT-
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00270-PBM/HughesRNA

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:KTKTKTKTKTTT
---TGTGTGT--
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T C T A G A C G T A C T G A C G T A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00003-PBM/HughesRNA

Match Rank:6
Score:0.75
Offset:3
Orientation:forward strand
Alignment:KTKTKTKTKTTT
---TGTGTGT--
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:7
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:KTKTKTKTKTTT
---TGTGTGT--
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G A T C T A G A C G T C A T G A C G T A C G T A C G T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:8
Score:0.74
Offset:3
Orientation:forward strand
Alignment:KTKTKTKTKTTT
---TGTGTGT--
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---KTKTKTKTKTTT--
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Lm_0255(RRM)/Leishmania_major-RNCMPT00255-PBM/HughesRNA

Match Rank:10
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:KTKTKTKTKTTT
-----TTTTTTT
 C A G T A C G T A C G T A C G T C A G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G C T A C G T A C G T A C G T A C G T