Information for 17-AGAYGGAGTYTC (Motif 18)

C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
Reverse Opposite:
T C A G T C G A T C A G T C G A G A T C G A C T A T G C G A T C T C A G A G C T A G T C A G C T
p-value:1e-950
log p-value:-2.189e+03
Information Content per bp:1.795
Number of Target Sequences with motif1918.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif406.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets272.6 +/- 235.3bp
Average Position of motif in Background233.8 +/- 222.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAYGGAGTYTC
-GATGGAGT---
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T

RBM5(RRM)/Homo_sapiens-RNCMPT00154-PBM/HughesRNA

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGAYGGAGTYTC
-GAAGGAG----
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A T C G C G T A T C G A A T C G A T C G C T G A C T A G A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGAYGGAGTYTC---
NTNNNAGGAGTCTCNTN
 A C G T A C G T C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

ARG80(MacIsaac)/Yeast

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGAYGGAGTYTC
-----GCGTCT-
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C T G A C G T A G T C C G A T A C G T

ARG80/MA0271.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGAYGGAGTYTC
-----GCGTCT-
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C T G A C G T A G T C C G A T A C G T

ADR1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAYGGAGTYTC
---NGGAGG---
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C G T A C G T A C G T

ADR1(MacIsaac)/Yeast

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAYGGAGTYTC
---NGGAGG---
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C G T A C G T A C G T

YLR278C/MA0430.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGAYGGAGTYTC
--CCGGAGTT--
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
A C G T A C G T A G T C A G T C A C T G A C T G C T G A T A C G C G A T C G A T A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAYGGAGTYTC
GGAACAGATGGCA----
 A C G T A C G T A C G T A C G T A C G T C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGAYGGAGTYTC-
---GGGAATTTCC
 C T G A T C A G T C G A A G T C C T A G A T C G C T G A C T A G A G C T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C