Information for 17-AWATAWATAW (Motif 20)

T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
Reverse Opposite:
G C T A A G C T C G T A A C G T G C A T A G C T T C G A A C G T G C A T A G C T
p-value:1e-602
log p-value:-1.387e+03
Information Content per bp:1.664
Number of Target Sequences with motif4473.0
Percentage of Target Sequences with motif6.93%
Number of Background Sequences with motif6516.9
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets281.3 +/- 213.7bp
Average Position of motif in Background256.7 +/- 205.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: TA-repeat

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AWATAWATAW
TATATATATA-
 A C G T T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T

SPT15/MA0386.1/Jaspar

Match Rank:2
Score:0.81
Offset:-6
Orientation:forward strand
Alignment:------AWATAWATAW-----
GACTAGATATATATATTCGAT
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A G A T C G A C T C G T A T C A G C T G A G C A T C G T A C A G T C G T A C G A T C G T A G C A T C G T A C G A T C G A T T A G C T C A G G C T A C A G T

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---AWATAWATAW---
TCTTTATATATAAATA
 A C G T A C G T A C G T T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

TBP(- other)/several species/AthaMap

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AWATAWATAW-
ACTATAAATACC
 A C G T T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T A C G T
G C A T G A T C G C A T C G T A A G C T C G T A C G T A C T G A G C A T C T G A A T G C T G A C

bin/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AWATAWATAW
--ATAAATA-
 T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A C G T C G T A A C G T

Cf2/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AWATAWATAW
GTATATATA-
 T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
T C A G A G C T C T G A A G C T T C G A G A C T C T G A A G C T T C G A A C G T

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:7
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AWATAWATAW
--ATATATA-
 T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T G T C A A C G T

Cf2/MA0015.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AWATAWATAW
GTATATATAC
 T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
T C A G A G C T T C G A A G C T G T C A A G C T T C G A G A C T C T G A A G T C

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AWATAWATAW
-TATATAN--
 T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
A C G T G A C T C G T A A C G T C G T A C G A T C G T A A T C G A C G T A C G T

abd-A/dmmpmm(Down)/fly

Match Rank:10
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AWATAWATAW
--ATAAAT--
 T C G A C G T A T G C A A G C T C T G A C G T A G T C A G C A T T C G A C G A T
A C G T A C G T C G T A G C A T G T C A G C T A G C T A G C A T A C G T A C G T