Information for 19-CAACAACAACAA (Motif 25)

A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C T G C G A T A C G T A C T G A C G T A C G T A C T G
p-value:1e-140
log p-value:-3.243e+02
Information Content per bp:1.955
Number of Target Sequences with motif308.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif84.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets268.3 +/- 203.7bp
Average Position of motif in Background239.8 +/- 281.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CAACAACAACAA--
CAAACAACAACACCT
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Aef1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CAACAACAACAA
CAACAACA----
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Aef1/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.71
Offset:6
Orientation:forward strand
Alignment:CAACAACAACAA
------CAACAA
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAACAACAACAA
-AACAACN----
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
A C G T C T G A C T G A A T G C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAACAACAACAA
CAACAGAAAWWA
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
G T A C T G C A C T G A T G A C T C G A C A T G C G T A C T G A C G T A G C A T G C A T G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAACAACAACAA
ATGTCACAACAACAC
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAACAACAACAA
AACAAACAACAAGAG
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

YBX1(CSD)/Homo_sapiens-RNCMPT00083-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAACAACAACAA
-AACATCA----
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
A C G T C G T A G T C A A G T C C G T A G A C T A G T C C G T A A C G T A C G T A C G T A C G T

fkh-9/MA1440.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAACAACAACAA
-AAAAACAA---
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
A C G T T C G A G C T A G C T A G T C A C G T A G A T C C G T A C G T A A C G T A C G T A C G T

UNC-75(RRM)/Caenorhabditis_elegans-RNCMPT00081-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAACAACAACAA
-CACAACA----
 A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A C G T A G T A C C G T A C G T A
A C G T G A T C G T C A G T A C G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T