Information for 4-NCAGSMHCTG (Motif 7)

G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G C A G T A C G T T A G C A G T C C G A T A T C G C T A G
p-value:1e-4276
log p-value:-9.848e+03
Information Content per bp:1.679
Number of Target Sequences with motif38263.0
Percentage of Target Sequences with motif59.27%
Number of Background Sequences with motif79034.7
Percentage of Background Sequences with motif29.30%
Average Position of motif in Targets256.0 +/- 189.6bp
Average Position of motif in Background239.9 +/- 240.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:NCAGSMHCTG
-CAGCCAC--
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G
A C G T A G T C C G T A A C T G A G T C A G T C C G A T A G T C A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:NCAGSMHCTG----------
YCAGGCWCAGTACCAGGCTC
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

SeqBias: GCW-triplet

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-NCAGSMHCTG-
AGCAGCAGCAGC
 A C G T G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G A C G T
C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-NCAGSMHCTG
CACAGN-----
 A C G T G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ovo/MA0126.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:NCAGSMHCTG-
--AGTAACAGT
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G A C G T
A C G T A C G T G C T A A T C G C G A T C G T A C G T A A G T C G C T A A C T G G C A T

prd/MA0239.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:NCAGSMHCTG-
--AGTAACAGT
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G A C G T
A C G T A C G T G C T A A T C G C G A T C G T A C G T A A G T C G C T A A C T G G C A T

ovo/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:NCAGSMHCTG-
--AGTAACNGT
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G A C G T
A C G T A C G T G C T A A T C G C G A T C G T A C G T A A G T C G C T A A C T G G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:NCAGSMHCTG
CCAGGAACAG
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

TCF4/MA0830.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:NCAGSMHCTG----
-CGGCACCTGCCCC
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SWI5/Literature(Harbison)/Yeast

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:NCAGSMHCTG
CCAGCA----
 G A T C A T G C C G T A A C T G A T C G T G C A G T C A A G T C C G A T A C T G
A G C T A G T C C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T