Information for 8-GAGAGAGAGAGA (Motif 8)

T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
Reverse Opposite:
G A C T A G T C G A C T A T G C G A C T A T G C G A C T A T G C G A C T A T G C G A C T A T G C
p-value:1e-3968
log p-value:-9.138e+03
Information Content per bp:1.569
Number of Target Sequences with motif37964.0
Percentage of Target Sequences with motif58.81%
Number of Background Sequences with motif80647.2
Percentage of Background Sequences with motif29.90%
Average Position of motif in Targets262.5 +/- 193.9bp
Average Position of motif in Background232.4 +/- 290.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.76
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: GA-repeat

Match Rank:1
Score:0.91
Offset:2
Orientation:forward strand
Alignment:GAGAGAGAGAGA
--GAGAGAGAGA
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
A C G T A C G T C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A

RAMOSA1/MA1416.1/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--GAGAGAGAGAGA
GAGAGAGAGAGAGA
 A C G T A C G T T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
C T A G T C G A C T A G T C G A A C T G G T C A A C T G G T C A A C T G G T C A A C T G T C G A C T A G C T G A

FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GAGAGAGAGAGA-
-RGAGAGAGAAAG
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A A C G T
A C G T C T A G C T A G T C G A C T A G C G T A A T C G T C G A A C T G C T G A T C G A C T G A T A C G

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:4
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:GAGAGAGAGAGA
-RGAGAGAGAG-
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
A C G T C T G A T A C G C G T A A T C G C G T A A T C G G C T A A T C G C G T A T A C G A C G T

Trl/dmmpmm(Down)/fly

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GAGAGAGAGAGA
GAGAGAGAGAGC
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
T C A G T G C A T C A G G T C A C A T G T C G A T C A G G T C A C T A G T G C A C T A G G T A C

Trl/MA0205.2/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GAGAGAGAGAGA
GAAAGAGAGAGA
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
T C A G T C G A T C G A G C T A C A T G C G T A A T C G T G C A C T A G T G C A T C A G T C G A

BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGAGAGAGA-
TAGAGAGAGAGARAR
 A C G T A C G T T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A A C G T
C A G T G C T A A C T G C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T A G C G T A C T G A C T G A C T A G

GAGA-repeat/SacCer-Promoters/Homer

Match Rank:8
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGAGA---
GAGAGAGARAGARAG
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A A C G T A C G T A C G T
C T A G T C G A C T A G T G C A T C A G C T G A C T A G C T G A C T A G T C G A C T A G C T G A C T A G C G T A C T A G

eor-1/MA0543.1/Jaspar

Match Rank:9
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---GAGAGAGAGAGA
AGAGAGACGCAGAGA
 A C G T A C G T A C G T T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A
C T G A C T A G T C G A C T A G G C T A C T A G C T G A T A G C C T A G T A G C T G C A T C A G C T G A T A C G C T G A

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GAGAGAGAGAGA--
GAGAGAGAGAGCAA
 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A A C G T A C G T
T C A G T G C A T C A G G C T A A C T G T G C A T C A G C T G A C T A G G T C A C T A G G T A C T C G A C T G A