Homer de novo Motif Results (analysis_output//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 64509
Total background sequences = 464
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * G C A T C G A T G C A T G C A T C G A T C G A T G C A T G C A T G C A T C G A T 1e0-0.000e+0017.21%88.20%201.9bp (3864241.0bp)VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer(0.960)
More Information | Similar Motifs Found		motif file (matrix)
2 * A C T G A G C T C G T A C G T A C G T A A G T C C G T A T A C G C T G A T G C A 1e0-0.000e+000.60%43.49%158.4bp (3999376.3bp)Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer(0.962)
More Information | Similar Motifs Found		motif file (matrix)
3 * G C A T G C T A G C T A C G T A G C A T C G T A C G A T C G A T 1e0-0.000e+0011.51%85.26%174.7bp (4482196.4bp)br-Z4/dmmpmm(SeSiMCMC)/fly(0.845)
More Information | Similar Motifs Found		motif file (matrix)
4 * C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T 1e0-0.000e+007.81%87.55%188.1bp (4232642.8bp)Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA(0.895)
More Information | Similar Motifs Found		motif file (matrix)