Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 64514)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 464)	% of Background Sequences with Motif
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e0	-0.000e+00	1.0000	12277.0	19.03%	419.7	90.51%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e0	-0.000e+00	1.0000	17843.0	27.66%	424.7	91.59%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-0.000e+00	1.0000	7538.0	11.68%	415.8	89.66%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e0	-0.000e+00	1.0000	7542.0	11.69%	411.1	88.66%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	-0.000e+00	1.0000	6880.0	10.66%	454.3	97.96%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e0	-0.000e+00	1.0000	26402.0	40.93%	453.3	97.76%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e0	-0.000e+00	1.0000	9341.0	14.48%	420.8	90.75%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e0	-0.000e+00	1.0000	27405.0	42.48%	449.4	96.92%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e0	-0.000e+00	1.0000	19140.0	29.67%	448.4	96.69%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-0.000e+00	1.0000	9380.0	14.54%	409.3	88.25%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-0.000e+00	1.0000	11873.0	18.40%	418.8	90.31%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	-0.000e+00	1.0000	23965.0	37.15%	438.5	94.56%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e0	-0.000e+00	1.0000	10899.0	16.89%	457.7	98.70%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e0	-0.000e+00	1.0000	28555.0	44.26%	454.8	98.07%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e0	-0.000e+00	1.0000	25874.0	40.11%	452.4	97.55%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e0	-0.000e+00	1.0000	7844.0	12.16%	414.1	89.29%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e0	-0.000e+00	1.0000	26037.0	40.36%	442.8	95.48%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e0	-0.000e+00	1.0000	21075.0	32.67%	451.9	97.45%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e0	-0.000e+00	1.0000	22444.0	34.79%	443.3	95.59%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-0.000e+00	1.0000	13368.0	20.72%	431.8	93.12%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-0.000e+00	1.0000	7753.0	12.02%	432.7	93.31%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-0.000e+00	1.0000	10520.0	16.31%	424.9	91.63%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	-0.000e+00	1.0000	25295.0	39.21%	436.8	94.19%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-0.000e+00	1.0000	9612.0	14.90%	404.3	87.18%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	-0.000e+00	1.0000	12564.0	19.48%	426.6	91.99%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-0.000e+00	1.0000	15494.0	24.02%	458.5	98.87%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-0.000e+00	1.0000	6437.0	9.98%	422.1	91.02%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e0	-0.000e+00	1.0000	5899.0	9.14%	406.3	87.61%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-0.000e+00	1.0000	34496.0	53.47%	426.5	91.97%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-0.000e+00	1.0000	36988.0	57.33%	454.4	97.98%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e0	-0.000e+00	1.0000	26169.0	40.56%	453.6	97.83%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-0.000e+00	1.0000	32008.0	49.61%	459.4	99.07%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e0	-0.000e+00	1.0000	9777.0	15.16%	426.2	91.90%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e0	-0.000e+00	1.0000	14978.0	23.22%	429.3	92.57%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-0.000e+00	1.0000	18766.0	29.09%	431.1	92.96%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e0	-0.000e+00	1.0000	29597.0	45.88%	442.3	95.38%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	-0.000e+00	1.0000	6720.0	10.42%	405.4	87.42%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-0.000e+00	1.0000	5811.0	9.01%	417.2	89.98%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e0	-0.000e+00	1.0000	4294.0	6.66%	403.0	86.89%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-0.000e+00	1.0000	11018.0	17.08%	446.5	96.29%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-0.000e+00	1.0000	8811.0	13.66%	411.8	88.81%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-0.000e+00	1.0000	25089.0	38.89%	425.6	91.79%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-0.000e+00	1.0000	22468.0	34.83%	460.4	99.29%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e0	-0.000e+00	1.0000	28913.0	44.82%	441.1	95.12%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-0.000e+00	1.0000	14717.0	22.81%	428.9	92.50%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-0.000e+00	1.0000	4820.0	7.47%	406.6	87.69%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-0.000e+00	1.0000	13200.0	20.46%	408.2	88.04%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e0	-0.000e+00	1.0000	27189.0	42.14%	453.5	97.78%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e0	-0.000e+00	1.0000	2485.0	3.85%	397.4	85.70%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e0	-0.000e+00	1.0000	9495.0	14.72%	416.9	89.91%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e0	-0.000e+00	1.0000	9024.0	13.99%	416.9	89.89%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e0	-0.000e+00	1.0000	19988.0	30.98%	428.4	92.39%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e0	-0.000e+00	1.0000	10871.0	16.85%	415.9	89.69%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-0.000e+00	1.0000	37711.0	58.45%	447.4	96.48%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	-0.000e+00	1.0000	333.0	0.52%	328.8	70.90%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e0	-0.000e+00	1.0000	26254.0	40.70%	439.8	94.84%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-0.000e+00	1.0000	24844.0	38.51%	453.5	97.79%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-0.000e+00	1.0000	25278.0	39.18%	437.3	94.31%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-0.000e+00	1.0000	26268.0	40.72%	452.1	97.49%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e0	-0.000e+00	1.0000	21332.0	33.07%	423.0	91.21%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-0.000e+00	1.0000	9694.0	15.03%	412.4	88.94%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e0	-0.000e+00	1.0000	30162.0	46.75%	439.1	94.69%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-0.000e+00	1.0000	9369.0	14.52%	423.2	91.26%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-0.000e+00	1.0000	16306.0	25.28%	425.4	91.74%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-0.000e+00	1.0000	3431.0	5.32%	408.3	88.06%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e0	-0.000e+00	1.0000	30924.0	47.93%	444.5	95.86%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-0.000e+00	1.0000	27959.0	43.34%	439.5	94.77%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	-0.000e+00	1.0000	5699.0	8.83%	409.9	88.38%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e0	-0.000e+00	1.0000	49173.0	76.22%	462.8	99.80%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-0.000e+00	1.0000	10676.0	16.55%	449.6	96.96%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e0	-0.000e+00	1.0000	15581.0	24.15%	422.0	91.01%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e0	-0.000e+00	1.0000	39174.0	60.72%	459.2	99.02%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e0	-0.000e+00	1.0000	15574.0	24.14%	425.8	91.81%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-0.000e+00	1.0000	40851.0	63.32%	452.7	97.63%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e0	-0.000e+00	1.0000	28744.0	44.56%	453.0	97.69%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-0.000e+00	1.0000	11381.0	17.64%	448.5	96.72%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e0	-0.000e+00	1.0000	23235.0	36.02%	438.3	94.52%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e0	-0.000e+00	1.0000	23471.0	36.38%	424.5	91.54%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e0	-0.000e+00	1.0000	17237.0	26.72%	420.2	90.62%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e0	-0.000e+00	1.0000	13752.0	21.32%	419.9	90.55%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e0	-0.000e+00	1.0000	10882.0	16.87%	424.0	91.43%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e0	-0.000e+00	1.0000	18577.0	28.80%	426.9	92.06%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-0.000e+00	1.0000	22262.0	34.51%	427.3	92.15%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e0	-0.000e+00	1.0000	27100.0	42.01%	454.1	97.93%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e0	-0.000e+00	1.0000	17832.0	27.64%	418.3	90.20%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e0	-0.000e+00	1.0000	32702.0	50.69%	445.3	96.02%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-0.000e+00	1.0000	7106.0	11.01%	400.6	86.39%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	13492.0	20.91%	427.1	92.11%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-0.000e+00	1.0000	1571.0	2.44%	389.1	83.90%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-0.000e+00	1.0000	1571.0	2.44%	389.1	83.90%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e0	-0.000e+00	1.0000	20643.0	32.00%	426.5	91.97%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-0.000e+00	1.0000	38840.0	60.20%	442.3	95.37%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-0.000e+00	1.0000	39436.0	61.13%	452.9	97.67%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-0.000e+00	1.0000	11241.0	17.42%	432.0	93.15%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-0.000e+00	1.0000	14900.0	23.10%	430.8	92.89%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e0	-0.000e+00	1.0000	28829.0	44.69%	441.5	95.20%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e0	-0.000e+00	1.0000	41842.0	64.86%	462.1	99.64%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-0.000e+00	1.0000	30888.0	47.88%	454.3	97.96%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-0.000e+00	1.0000	11658.0	18.07%	428.9	92.48%
SeqBias: CG bias	SSSSSSSSSS	1e0	-0.000e+00	1.0000	44275.0	68.63%	428.6	92.42%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	-0.000e+00	1.0000	4315.0	6.69%	399.9	86.23%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	-0.000e+00	1.0000	18737.0	29.04%	462.0	99.63%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-0.000e+00	1.0000	6081.0	9.43%	403.1	86.92%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e0	-0.000e+00	1.0000	16775.0	26.00%	430.4	92.81%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-0.000e+00	1.0000	17835.0	27.65%	425.9	91.84%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e0	-0.000e+00	1.0000	7539.0	11.69%	403.5	87.02%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e0	-0.000e+00	1.0000	22614.0	35.05%	424.9	91.62%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e0	-0.000e+00	1.0000	13788.0	21.37%	447.7	96.55%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-0.000e+00	1.0000	26718.0	41.41%	447.4	96.49%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-0.000e+00	1.0000	931.0	1.44%	368.6	79.50%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	-0.000e+00	1.0000	919.0	1.42%	380.3	82.02%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e0	-0.000e+00	1.0000	25097.0	38.90%	436.0	94.02%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	-0.000e+00	1.0000	10458.0	16.21%	418.6	90.27%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e0	-0.000e+00	1.0000	46272.0	71.73%	462.1	99.66%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e0	-0.000e+00	1.0000	37483.0	58.10%	461.1	99.43%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e0	-0.000e+00	1.0000	40136.0	62.21%	450.7	97.19%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e0	-0.000e+00	1.0000	21889.0	33.93%	453.1	97.71%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e0	-0.000e+00	1.0000	9312.0	14.43%	413.8	89.22%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	-0.000e+00	1.0000	2406.0	3.73%	404.2	87.16%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e0	-0.000e+00	1.0000	3600.0	5.58%	401.1	86.50%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	-0.000e+00	1.0000	3635.0	5.63%	402.6	86.83%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-0.000e+00	1.0000	32776.0	50.81%	441.3	95.17%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-0.000e+00	1.0000	18893.0	29.29%	427.3	92.15%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	-0.000e+00	1.0000	46.0	0.07%	83.6	18.02%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e0	-0.000e+00	1.0000	13819.0	21.42%	417.6	90.06%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	-0.000e+00	1.0000	20510.0	31.79%	437.4	94.32%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e0	-0.000e+00	1.0000	12350.0	19.14%	431.1	92.97%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e0	-0.000e+00	1.0000	21058.0	32.64%	445.6	96.09%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	-0.000e+00	1.0000	15256.0	23.65%	460.1	99.23%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-0.000e+00	1.0000	11775.0	18.25%	458.5	98.87%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-0.000e+00	1.0000	9423.0	14.61%	423.8	91.39%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-0.000e+00	1.0000	22619.0	35.06%	432.0	93.15%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-0.000e+00	1.0000	8133.0	12.61%	402.3	86.76%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e0	-0.000e+00	1.0000	30579.0	47.40%	451.6	97.39%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e0	-0.000e+00	1.0000	10112.0	15.67%	406.3	87.62%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-0.000e+00	1.0000	11596.0	17.97%	402.8	86.87%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-0.000e+00	1.0000	19726.0	30.58%	428.7	92.44%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-0.000e+00	1.0000	12725.0	19.72%	424.7	91.58%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e0	-0.000e+00	1.0000	18109.0	28.07%	431.4	93.02%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-0.000e+00	1.0000	23296.0	36.11%	419.0	90.35%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e0	-0.000e+00	1.0000	11641.0	18.04%	429.0	92.51%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e0	-0.000e+00	1.0000	29540.0	45.79%	445.4	96.04%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-0.000e+00	1.0000	12406.0	19.23%	453.7	97.83%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-0.000e+00	1.0000	10168.0	15.76%	403.9	87.10%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-0.000e+00	1.0000	30602.0	47.44%	444.9	95.93%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e0	-0.000e+00	1.0000	41013.0	63.57%	463.1	99.87%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-0.000e+00	1.0000	12860.0	19.93%	429.6	92.64%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	-0.000e+00	1.0000	27540.0	42.69%	433.0	93.36%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e0	-0.000e+00	1.0000	24052.0	37.28%	457.6	98.67%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-0.000e+00	1.0000	20045.0	31.07%	415.6	89.61%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e0	-0.000e+00	1.0000	38127.0	59.10%	454.0	97.91%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e0	-0.000e+00	1.0000	13911.0	21.56%	413.7	89.22%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e0	-0.000e+00	1.0000	32609.0	50.55%	442.6	95.45%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e0	-0.000e+00	1.0000	16785.0	26.02%	445.6	96.10%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-0.000e+00	1.0000	18729.0	29.03%	432.3	93.23%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-0.000e+00	1.0000	10285.0	15.94%	417.4	90.01%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-0.000e+00	1.0000	6095.0	9.45%	401.3	86.54%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-0.000e+00	1.0000	18726.0	29.03%	428.9	92.48%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-0.000e+00	1.0000	32518.0	50.41%	454.8	98.07%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-0.000e+00	1.0000	23282.0	36.09%	431.2	92.98%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	-0.000e+00	1.0000	20159.0	31.25%	440.0	94.88%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-0.000e+00	1.0000	6928.0	10.74%	441.9	95.29%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-0.000e+00	1.0000	20329.0	31.51%	440.5	94.99%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	-0.000e+00	1.0000	14293.0	22.16%	415.9	89.68%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-0.000e+00	1.0000	14971.0	23.21%	424.3	91.49%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-0.000e+00	1.0000	6820.0	10.57%	411.7	88.78%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-0.000e+00	1.0000	8486.0	13.15%	399.7	86.20%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e0	-0.000e+00	1.0000	36799.0	57.04%	459.6	99.12%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e0	-0.000e+00	1.0000	14445.0	22.39%	418.1	90.17%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e0	-0.000e+00	1.0000	25174.0	39.02%	449.3	96.88%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e0	-0.000e+00	1.0000	39853.0	61.78%	459.3	99.05%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-0.000e+00	1.0000	16776.0	26.00%	418.9	90.34%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e0	-0.000e+00	1.0000	36408.0	56.44%	435.4	93.89%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e0	-0.000e+00	1.0000	9457.0	14.66%	404.4	87.20%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-0.000e+00	1.0000	29315.0	45.44%	427.9	92.28%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e0	-0.000e+00	1.0000	9429.0	14.62%	412.3	88.91%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-0.000e+00	1.0000	18169.0	28.16%	450.8	97.20%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-0.000e+00	1.0000	26153.0	40.54%	442.3	95.38%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-0.000e+00	1.0000	4134.0	6.41%	402.4	86.77%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	-0.000e+00	1.0000	1838.0	2.85%	403.1	86.92%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e0	-0.000e+00	1.0000	8035.0	12.45%	410.5	88.52%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	-0.000e+00	1.0000	14655.0	22.72%	418.8	90.31%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-0.000e+00	1.0000	7530.0	11.67%	407.5	87.88%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-0.000e+00	1.0000	7770.0	12.04%	417.7	90.07%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-0.000e+00	1.0000	13696.0	21.23%	424.4	91.51%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-0.000e+00	1.0000	9256.0	14.35%	403.4	86.99%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-0.000e+00	1.0000	12346.0	19.14%	414.5	89.39%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-0.000e+00	1.0000	25934.0	40.20%	432.5	93.26%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	-0.000e+00	1.0000	5681.0	8.81%	401.6	86.60%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-0.000e+00	1.0000	19812.0	30.71%	432.5	93.26%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-0.000e+00	1.0000	14268.0	22.12%	447.1	96.41%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-0.000e+00	1.0000	28324.0	43.90%	441.9	95.28%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e0	-0.000e+00	1.0000	14646.0	22.70%	411.7	88.77%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e0	-0.000e+00	1.0000	14096.0	21.85%	424.7	91.58%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e0	-0.000e+00	1.0000	19829.0	30.74%	422.6	91.13%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e0	-0.000e+00	1.0000	32573.0	50.49%	454.6	98.04%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	19026.0	29.49%	420.9	90.76%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-0.000e+00	1.0000	16423.0	25.46%	411.5	88.74%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e0	-0.000e+00	1.0000	43871.0	68.00%	463.4	99.92%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e0	-0.000e+00	1.0000	9124.0	14.14%	427.1	92.11%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-0.000e+00	1.0000	118.0	0.18%	190.1	40.99%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	-0.000e+00	1.0000	19411.0	30.09%	420.8	90.75%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e0	-0.000e+00	1.0000	54749.0	84.87%	463.7	100.00%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e0	-0.000e+00	1.0000	16782.0	26.01%	418.5	90.25%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e0	-0.000e+00	1.0000	13773.0	21.35%	432.0	93.16%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-0.000e+00	1.0000	18856.0	29.23%	435.2	93.86%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-0.000e+00	1.0000	23410.0	36.29%	434.0	93.60%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e0	-0.000e+00	1.0000	26565.0	41.18%	434.0	93.59%
SeqBias: TA-repeat	TATATATATA	1e0	-0.000e+00	1.0000	45267.0	70.17%	454.7	98.05%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-0.000e+00	1.0000	3692.0	5.72%	406.5	87.66%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e0	-0.000e+00	1.0000	3699.0	5.73%	399.4	86.13%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	-0.000e+00	1.0000	3697.0	5.73%	401.7	86.63%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e0	-0.000e+00	1.0000	28981.0	44.92%	451.2	97.30%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-0.000e+00	1.0000	10397.0	16.12%	411.3	88.70%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-0.000e+00	1.0000	5252.0	8.14%	414.7	89.42%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-0.000e+00	1.0000	3459.0	5.36%	405.5	87.44%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-0.000e+00	1.0000	10839.0	16.80%	416.4	89.79%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e0	-0.000e+00	1.0000	22929.0	35.54%	422.0	90.99%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-0.000e+00	1.0000	23373.0	36.23%	461.9	99.62%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-0.000e+00	1.0000	30735.0	47.64%	423.7	91.36%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e0	-0.000e+00	1.0000	16923.0	26.23%	419.2	90.40%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-0.000e+00	1.0000	10192.0	15.80%	402.1	86.71%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e0	-0.000e+00	1.0000	16935.0	26.25%	458.8	98.93%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-0.000e+00	1.0000	8213.0	12.73%	446.9	96.37%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-0.000e+00	1.0000	6708.0	10.40%	413.7	89.21%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	-0.000e+00	1.0000	2407.0	3.73%	404.2	87.16%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e0	-0.000e+00	1.0000	33697.0	52.23%	451.8	97.44%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-0.000e+00	1.0000	16003.0	24.81%	435.8	93.98%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-0.000e+00	1.0000	14517.0	22.50%	422.1	91.03%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-0.000e+00	1.0000	7955.0	12.33%	408.0	87.97%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-0.000e+00	1.0000	16097.0	24.95%	426.6	92.00%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-0.000e+00	1.0000	21205.0	32.87%	451.3	97.32%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e0	-0.000e+00	1.0000	866.0	1.34%	364.5	78.59%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	-0.000e+00	1.0000	18557.0	28.76%	440.8	95.06%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e0	-0.000e+00	1.0000	12336.0	19.12%	414.7	89.42%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-0.000e+00	1.0000	10187.0	15.79%	413.0	89.05%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-0.000e+00	1.0000	12051.0	18.68%	411.0	88.63%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e0	-0.000e+00	1.0000	12741.0	19.75%	413.0	89.06%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e0	-0.000e+00	1.0000	9242.0	14.33%	426.0	91.86%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e0	-0.000e+00	1.0000	29128.0	45.15%	442.4	95.40%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e0	-0.000e+00	1.0000	41271.0	63.97%	462.5	99.73%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e0	-0.000e+00	1.0000	15176.0	23.52%	424.2	91.48%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e0	-0.000e+00	1.0000	26522.0	41.11%	445.4	96.04%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	-0.000e+00	1.0000	9842.0	15.26%	433.5	93.49%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	-0.000e+00	1.0000	14815.0	22.96%	428.4	92.39%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	-0.000e+00	1.0000	11462.0	17.77%	418.0	90.14%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	-0.000e+00	1.0000	3.0	0.00%	20.0	4.31%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e0	-0.000e+00	1.0000	26210.0	40.63%	453.3	97.76%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e0	-0.000e+00	1.0000	28374.0	43.98%	453.7	97.83%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-0.000e+00	1.0000	28050.0	43.48%	452.5	97.57%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e0	-0.000e+00	1.0000	49856.0	77.28%	454.5	98.02%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e0	-0.000e+00	1.0000	17126.0	26.55%	423.7	91.37%
Tal1	CATCTG	1e0	-0.000e+00	1.0000	17485.0	27.10%	419.7	90.51%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-0.000e+00	1.0000	6710.0	10.40%	405.4	87.43%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-0.000e+00	1.0000	18755.0	29.07%	454.6	98.03%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-0.000e+00	1.0000	15387.0	23.85%	454.9	98.10%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e0	-0.000e+00	1.0000	43191.0	66.95%	462.5	99.73%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-0.000e+00	1.0000	12870.0	19.95%	425.5	91.75%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-0.000e+00	1.0000	5065.0	7.85%	430.5	92.84%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-0.000e+00	1.0000	14791.0	22.93%	422.8	91.18%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	-0.000e+00	1.0000	11904.0	18.45%	425.0	91.64%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-0.000e+00	1.0000	9558.0	14.82%	417.1	89.94%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-0.000e+00	1.0000	8979.0	13.92%	403.9	87.11%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e0	-0.000e+00	1.0000	22177.0	34.38%	426.3	91.93%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e0	-0.000e+00	1.0000	16061.0	24.90%	417.1	89.95%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-0.000e+00	1.0000	12095.0	18.75%	446.5	96.28%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-0.000e+00	1.0000	32833.0	50.89%	456.4	98.42%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-0.000e+00	1.0000	27603.0	42.79%	450.8	97.22%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-0.000e+00	1.0000	4408.0	6.83%	401.7	86.62%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-0.000e+00	1.0000	19213.0	29.78%	431.4	93.02%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e0	-0.000e+00	1.0000	38199.0	59.21%	462.6	99.76%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	-0.000e+00	1.0000	654.0	1.01%	337.1	72.68%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-0.000e+00	1.0000	20050.0	31.08%	430.8	92.91%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-0.000e+00	1.0000	12497.0	19.37%	421.5	90.90%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e0	-0.000e+00	1.0000	16413.0	25.44%	453.5	97.80%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-0.000e+00	1.0000	4863.0	7.54%	411.5	88.74%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-0.000e+00	1.0000	20814.0	32.26%	450.2	97.08%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-0.000e+00	1.0000	16417.0	25.45%	428.6	92.43%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e0	-0.000e+00	1.0000	33007.0	51.16%	458.8	98.94%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e0	-0.000e+00	1.0000	13981.0	21.67%	411.8	88.81%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-0.000e+00	1.0000	12161.0	18.85%	459.7	99.13%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-0.000e+00	1.0000	20783.0	32.22%	436.3	94.09%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-0.000e+00	1.0000	10601.0	16.43%	430.4	92.81%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e0	-0.000e+00	1.0000	14862.0	23.04%	434.2	93.64%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e0	-0.000e+00	1.0000	10598.0	16.43%	414.4	89.36%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e0	-0.000e+00	1.0000	18578.0	28.80%	441.0	95.11%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-0.000e+00	1.0000	20486.0	31.75%	460.4	99.29%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	-0.000e+00	1.0000	152.0	0.24%	192.9	41.61%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e0	-0.000e+00	1.0000	16158.0	25.05%	410.4	88.51%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e0	-0.000e+00	1.0000	15165.0	23.51%	437.0	94.23%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-0.000e+00	1.0000	8534.0	13.23%	457.7	98.70%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-0.000e+00	1.0000	8534.0	13.23%	457.7	98.70%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-0.000e+00	1.0000	970.0	1.50%	386.7	83.39%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	-0.000e+00	1.0000	3857.0	5.98%	398.3	85.89%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e0	-0.000e+00	1.0000	6219.0	9.64%	408.7	88.13%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e0	-0.000e+00	1.0000	17346.0	26.89%	419.3	90.43%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-0.000e+00	1.0000	3159.0	4.90%	388.9	83.86%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e0	-0.000e+00	1.0000	11338.0	17.57%	408.0	87.98%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e0	-0.000e+00	1.0000	31166.0	48.31%	437.1	94.27%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-0.000e+00	1.0000	5752.0	8.92%	416.9	89.90%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	-0.000e+00	1.0000	2215.0	3.43%	402.6	86.81%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e0	-0.000e+00	1.0000	5117.0	7.93%	401.9	86.67%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-0.000e+00	1.0000	16935.0	26.25%	428.1	92.32%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e0	-0.000e+00	1.0000	2995.0	4.64%	404.1	87.15%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e0	-0.000e+00	1.0000	24627.0	38.17%	438.8	94.63%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e0	-0.000e+00	1.0000	33678.0	52.20%	454.6	98.03%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-0.000e+00	1.0000	31071.0	48.16%	423.0	91.21%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-0.000e+00	1.0000	16522.0	25.61%	433.5	93.48%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-0.000e+00	1.0000	13676.0	21.20%	413.9	89.25%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e0	-0.000e+00	1.0000	12951.0	20.08%	437.6	94.36%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-0.000e+00	1.0000	45376.0	70.34%	446.9	96.37%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-0.000e+00	1.0000	11068.0	17.16%	421.1	90.82%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	-0.000e+00	1.0000	21614.0	33.50%	449.1	96.84%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e0	-0.000e+00	1.0000	6703.0	10.39%	408.2	88.03%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-0.000e+00	1.0000	15829.0	24.54%	410.5	88.53%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e0	-0.000e+00	1.0000	9373.0	14.53%	423.7	91.37%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-0.000e+00	1.0000	12552.0	19.46%	418.6	90.26%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	-0.000e+00	1.0000	2015.0	3.12%	385.4	83.10%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e0	-0.000e+00	1.0000	41766.0	64.74%	463.1	99.87%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-0.000e+00	1.0000	21496.0	33.32%	436.7	94.16%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-0.000e+00	1.0000	8649.0	13.41%	406.3	87.61%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-0.000e+00	1.0000	14650.0	22.71%	450.4	97.12%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-0.000e+00	1.0000	30774.0	47.70%	448.0	96.61%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-0.000e+00	1.0000	47162.0	73.10%	453.9	97.89%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e0	-0.000e+00	1.0000	36783.0	57.02%	448.5	96.72%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-0.000e+00	1.0000	10717.0	16.61%	404.4	87.21%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e0	-0.000e+00	1.0000	10543.0	16.34%	457.5	98.65%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e0	-0.000e+00	1.0000	11735.0	18.19%	418.9	90.33%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	-0.000e+00	1.0000	2514.0	3.90%	409.3	88.26%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-0.000e+00	1.0000	15160.0	23.50%	423.4	91.31%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-0.000e+00	1.0000	8397.0	13.02%	450.5	97.16%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e0	-0.000e+00	1.0000	11044.0	17.12%	450.5	97.16%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	-0.000e+00	1.0000	4144.0	6.42%	427.1	92.10%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e0	-0.000e+00	1.0000	52233.0	80.97%	459.2	99.02%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e0	-0.000e+00	1.0000	15152.0	23.49%	426.5	91.98%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-0.000e+00	1.0000	13324.0	20.65%	419.4	90.44%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	-0.000e+00	1.0000	14977.0	23.22%	428.1	92.33%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	-0.000e+00	1.0000	7356.0	11.40%	411.2	88.68%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e0	-0.000e+00	1.0000	5270.0	8.17%	400.8	86.42%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e0	-0.000e+00	1.0000	55185.0	85.54%	463.2	99.89%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	-0.000e+00	1.0000	3509.0	5.44%	409.4	88.29%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-0.000e+00	1.0000	17657.0	27.37%	438.4	94.54%
SeqBias: CA-repeat	CACACACACA	1e0	-0.000e+00	1.0000	51575.0	79.95%	455.9	98.32%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	-0.000e+00	1.0000	3562.0	5.52%	450.6	97.16%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-0.000e+00	1.0000	1984.0	3.08%	388.6	83.79%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-0.000e+00	1.0000	5707.0	8.85%	408.7	88.13%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-0.000e+00	1.0000	6533.0	10.13%	402.0	86.69%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-0.000e+00	1.0000	41835.0	64.85%	445.2	96.02%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e0	-0.000e+00	1.0000	46847.0	72.62%	463.4	99.92%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e0	-0.000e+00	1.0000	18986.0	29.43%	461.7	99.57%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	-0.000e+00	1.0000	3414.0	5.29%	401.7	86.62%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e0	-0.000e+00	1.0000	3086.0	4.78%	403.9	87.10%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-0.000e+00	1.0000	37725.0	58.48%	449.8	97.00%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-0.000e+00	1.0000	12151.0	18.83%	409.4	88.29%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e0	-0.000e+00	1.0000	31636.0	49.04%	449.9	97.03%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-0.000e+00	1.0000	39797.0	61.69%	452.2	97.52%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-0.000e+00	1.0000	4345.0	6.74%	405.2	87.39%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-0.000e+00	1.0000	13497.0	20.92%	408.9	88.17%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e0	-0.000e+00	1.0000	41173.0	63.82%	463.4	99.92%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e0	-0.000e+00	1.0000	5904.0	9.15%	403.0	86.91%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-0.000e+00	1.0000	595.0	0.92%	363.3	78.34%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	-0.000e+00	1.0000	3949.0	6.12%	408.3	88.05%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-0.000e+00	1.0000	15423.0	23.91%	430.5	92.84%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e0	-0.000e+00	1.0000	3337.0	5.17%	397.8	85.78%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-0.000e+00	1.0000	6823.0	10.58%	418.9	90.33%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-0.000e+00	1.0000	9454.0	14.65%	405.9	87.53%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-0.000e+00	1.0000	28868.0	44.75%	439.2	94.70%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-0.000e+00	1.0000	3438.0	5.33%	397.8	85.79%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-0.000e+00	1.0000	20487.0	31.76%	432.3	93.22%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-0.000e+00	1.0000	7985.0	12.38%	397.9	85.80%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-0.000e+00	1.0000	8980.0	13.92%	398.9	86.02%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-0.000e+00	1.0000	25307.0	39.23%	421.4	90.87%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-0.000e+00	1.0000	9672.0	14.99%	391.5	84.43%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e0	-0.000e+00	1.0000	35276.0	54.68%	461.9	99.61%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-0.000e+00	1.0000	10007.0	15.51%	450.5	97.16%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-0.000e+00	1.0000	19525.0	30.27%	426.0	91.87%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e0	-0.000e+00	1.0000	10374.0	16.08%	416.2	89.76%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-0.000e+00	1.0000	22843.0	35.41%	437.3	94.30%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-0.000e+00	1.0000	11978.0	18.57%	412.6	88.98%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e0	-0.000e+00	1.0000	19404.0	30.08%	439.6	94.80%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e0	-0.000e+00	1.0000	26105.0	40.46%	444.2	95.80%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	-0.000e+00	1.0000	6223.0	9.65%	407.5	87.88%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	-0.000e+00	1.0000	3992.0	6.19%	402.2	86.74%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	-0.000e+00	1.0000	123.0	0.19%	209.9	45.26%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-0.000e+00	1.0000	12978.0	20.12%	433.4	93.46%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-0.000e+00	1.0000	12570.0	19.48%	427.7	92.23%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e0	-0.000e+00	1.0000	5496.0	8.52%	412.6	88.98%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-0.000e+00	1.0000	17464.0	27.07%	425.8	91.81%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e0	-0.000e+00	1.0000	19592.0	30.37%	453.8	97.85%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-0.000e+00	1.0000	8353.0	12.95%	415.0	89.49%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	-0.000e+00	1.0000	2042.0	3.17%	394.6	85.09%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e0	-0.000e+00	1.0000	32691.0	50.67%	448.4	96.69%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-0.000e+00	1.0000	4125.0	6.39%	399.4	86.13%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-0.000e+00	1.0000	15243.0	23.63%	448.9	96.80%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e0	-0.000e+00	1.0000	22615.0	35.05%	420.3	90.63%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e0	-0.000e+00	1.0000	24334.0	37.72%	434.8	93.76%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e0	-0.000e+00	1.0000	9150.0	14.18%	407.8	87.93%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-0.000e+00	1.0000	23601.0	36.58%	452.9	97.67%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	-0.000e+00	1.0000	19124.0	29.64%	431.1	92.97%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-0.000e+00	1.0000	25661.0	39.78%	419.2	90.40%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e0	-0.000e+00	1.0000	28049.0	43.48%	442.9	95.52%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-0.000e+00	1.0000	6003.0	9.31%	401.0	86.48%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	-0.000e+00	1.0000	119.0	0.18%	216.4	46.67%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-0.000e+00	1.0000	13847.0	21.46%	436.7	94.18%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e0	-0.000e+00	1.0000	12135.0	18.81%	447.8	96.56%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-0.000e+00	1.0000	10876.0	16.86%	448.8	96.78%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-0.000e+00	1.0000	13961.0	21.64%	423.2	91.26%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-0.000e+00	1.0000	45875.0	71.11%	453.4	97.77%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	-0.000e+00	1.0000	10612.0	16.45%	413.2	89.10%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-0.000e+00	1.0000	9437.0	14.63%	414.0	89.29%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e0	-0.000e+00	1.0000	4929.0	7.64%	409.7	88.34%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e0	-0.000e+00	1.0000	46108.0	71.47%	446.3	96.24%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e0	-0.000e+00	1.0000	6188.0	9.59%	414.1	89.30%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e0	-0.000e+00	1.0000	7866.0	12.19%	418.2	90.19%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e0	-0.000e+00	1.0000	16341.0	25.33%	417.7	90.08%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e0	-0.000e+00	1.0000	36682.0	56.86%	453.6	97.82%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e0	-0.000e+00	1.0000	22924.0	35.53%	449.2	96.86%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-0.000e+00	1.0000	582.0	0.90%	371.7	80.15%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-0.000e+00	1.0000	1813.0	2.81%	392.4	84.61%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e0	-0.000e+00	1.0000	12240.0	18.97%	415.1	89.51%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	-0.000e+00	1.0000	638.0	0.99%	360.3	77.70%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-0.000e+00	1.0000	10587.0	16.41%	406.5	87.65%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-0.000e+00	1.0000	11926.0	18.49%	411.3	88.70%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e0	-0.000e+00	1.0000	23129.0	35.85%	434.1	93.60%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e0	-0.000e+00	1.0000	32758.0	50.78%	451.5	97.36%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-0.000e+00	1.0000	8566.0	13.28%	413.4	89.16%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	-0.000e+00	1.0000	12875.0	19.96%	423.9	91.41%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	-0.000e+00	1.0000	28009.0	43.42%	441.7	95.26%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e0	-0.000e+00	1.0000	8209.0	12.72%	407.2	87.81%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e0	-0.000e+00	1.0000	5501.0	8.53%	400.0	86.26%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-0.000e+00	1.0000	17701.0	27.44%	418.7	90.28%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-0.000e+00	1.0000	3319.0	5.14%	405.5	87.44%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-0.000e+00	1.0000	16221.0	25.14%	438.2	94.49%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	-0.000e+00	1.0000	3776.0	5.85%	394.0	84.97%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-0.000e+00	1.0000	3474.0	5.38%	399.1	86.06%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-0.000e+00	1.0000	3877.0	6.01%	413.5	89.17%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e0	-0.000e+00	1.0000	10371.0	16.08%	409.1	88.22%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	-0.000e+00	1.0000	3984.0	6.18%	401.2	86.51%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	23289.0	36.10%	437.5	94.35%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-0.000e+00	1.0000	7284.0	11.29%	401.2	86.52%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-0.000e+00	1.0000	6008.0	9.31%	408.0	87.99%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	-0.000e+00	1.0000	12750.0	19.76%	414.4	89.37%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e0	-0.000e+00	1.0000	52826.0	81.88%	463.1	99.87%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e0	-0.000e+00	1.0000	14237.0	22.07%	417.8	90.11%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e0	-0.000e+00	1.0000	6186.0	9.59%	408.9	88.18%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e0	-0.000e+00	1.0000	25303.0	39.22%	453.3	97.76%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	-0.000e+00	1.0000	1658.0	2.57%	394.1	84.98%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e0	-0.000e+00	1.0000	16297.0	25.26%	425.7	91.80%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e0	-0.000e+00	1.0000	14107.0	21.87%	430.8	92.90%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e0	-0.000e+00	1.0000	8172.0	12.67%	425.8	91.82%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e0	-0.000e+00	1.0000	23398.0	36.27%	433.1	93.39%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	-0.000e+00	1.0000	1538.0	2.38%	383.8	82.75%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-0.000e+00	1.0000	26422.0	40.96%	455.4	98.21%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-0.000e+00	1.0000	14578.0	22.60%	411.0	88.63%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-0.000e+00	1.0000	160.0	0.25%	222.3	47.94%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e0	-0.000e+00	1.0000	7661.0	11.88%	406.5	87.66%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	-0.000e+00	1.0000	24876.0	38.56%	462.5	99.73%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e0	-0.000e+00	1.0000	15241.0	23.62%	422.0	90.99%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-0.000e+00	1.0000	837.0	1.30%	381.0	82.15%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e0	-0.000e+00	1.0000	12245.0	18.98%	420.6	90.70%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-0.000e+00	1.0000	19753.0	30.62%	460.7	99.34%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e0	-0.000e+00	1.0000	7708.0	11.95%	409.3	88.26%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	-0.000e+00	1.0000	1722.0	2.67%	403.4	86.99%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-0.000e+00	1.0000	7209.0	11.17%	397.1	85.63%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e0	-0.000e+00	1.0000	5072.0	7.86%	413.1	89.07%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-0.000e+00	1.0000	1292.0	2.00%	390.1	84.13%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-0.000e+00	1.0000	20736.0	32.14%	446.9	96.37%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e0	-0.000e+00	1.0000	13544.0	20.99%	417.2	89.96%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-0.000e+00	1.0000	11666.0	18.08%	409.9	88.40%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e0	-0.000e+00	1.0000	12157.0	18.84%	418.8	90.32%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e0	-0.000e+00	1.0000	9590.0	14.87%	399.3	86.10%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e0	-0.000e+00	1.0000	5413.0	8.39%	429.9	92.70%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-0.000e+00	1.0000	10537.0	16.33%	432.1	93.17%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e0	-0.000e+00	1.0000	6546.0	10.15%	413.5	89.17%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e0	-0.000e+00	1.0000	14887.0	23.08%	414.8	89.45%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e0	-0.000e+00	1.0000	2552.0	3.96%	394.7	85.12%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-0.000e+00	1.0000	3302.0	5.12%	398.4	85.92%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e0	-0.000e+00	1.0000	3457.0	5.36%	396.5	85.50%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	-0.000e+00	1.0000	4842.0	7.51%	442.2	95.36%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-0.000e+00	1.0000	8392.0	13.01%	442.2	95.35%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-0.000e+00	1.0000	11100.0	17.21%	432.5	93.27%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	-0.000e+00	1.0000	9240.0	14.32%	426.6	91.99%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-0.000e+00	1.0000	9948.0	15.42%	428.5	92.41%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-0.000e+00	1.0000	1055.0	1.64%	387.2	83.49%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-0.000e+00	1.0000	2458.0	3.81%	397.9	85.81%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e0	-0.000e+00	1.0000	7450.0	11.55%	406.7	87.70%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-0.000e+00	1.0000	11447.0	17.74%	411.1	88.66%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-0.000e+00	1.0000	12800.0	19.84%	418.1	90.16%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	-0.000e+00	1.0000	688.0	1.07%	374.5	80.76%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-0.000e+00	1.0000	15129.0	23.45%	424.7	91.59%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-0.000e+00	1.0000	12162.0	18.85%	410.4	88.51%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-0.000e+00	1.0000	8295.0	12.86%	392.6	84.67%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-0.000e+00	1.0000	8261.0	12.81%	426.4	91.95%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	-0.000e+00	1.0000	8258.0	12.80%	429.9	92.70%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-0.000e+00	1.0000	12330.0	19.11%	425.3	91.72%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-0.000e+00	1.0000	12293.0	19.06%	434.4	93.68%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-0.000e+00	1.0000	2843.0	4.41%	397.4	85.70%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	-0.000e+00	1.0000	1789.0	2.77%	383.9	82.78%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-0.000e+00	1.0000	21543.0	33.39%	430.8	92.91%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	-0.000e+00	1.0000	3367.0	5.22%	397.8	85.78%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	-0.000e+00	1.0000	14259.0	22.10%	431.9	93.14%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-0.000e+00	1.0000	3574.0	5.54%	384.2	82.84%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-0.000e+00	1.0000	2842.0	4.41%	395.2	85.22%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	-0.000e+00	1.0000	25.0	0.04%	105.8	22.82%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-0.000e+00	1.0000	3282.0	5.09%	412.6	88.98%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e0	-0.000e+00	1.0000	3318.0	5.14%	376.7	81.24%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-0.000e+00	1.0000	3551.0	5.50%	400.1	86.27%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	-0.000e+00	1.0000	17350.0	26.89%	419.6	90.48%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	-0.000e+00	1.0000	8527.0	13.22%	405.7	87.48%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e0	-0.000e+00	1.0000	15424.0	23.91%	416.3	89.76%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-0.000e+00	1.0000	7891.0	12.23%	414.7	89.42%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	-0.000e+00	1.0000	10153.0	15.74%	429.4	92.60%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e0	-0.000e+00	1.0000	9605.0	14.89%	418.6	90.26%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e0	-0.000e+00	1.0000	11674.0	18.10%	418.7	90.29%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-0.000e+00	1.0000	2588.0	4.01%	398.8	86.00%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-0.000e+00	1.0000	4566.0	7.08%	429.9	92.71%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-0.000e+00	1.0000	3657.0	5.67%	403.4	87.00%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-0.000e+00	1.0000	157.0	0.24%	246.7	53.20%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-0.000e+00	1.0000	3628.0	5.62%	407.5	87.88%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e0	-0.000e+00	1.0000	29383.0	45.55%	462.0	99.62%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e0	-0.000e+00	1.0000	17965.0	27.85%	426.1	91.88%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	-0.000e+00	1.0000	4329.0	6.71%	403.5	87.02%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e0	-0.000e+00	1.0000	2638.0	4.09%	385.7	83.17%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	-0.000e+00	1.0000	6514.0	10.10%	418.7	90.29%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-0.000e+00	1.0000	4787.0	7.42%	402.7	86.84%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-0.000e+00	1.0000	29616.0	45.91%	460.1	99.22%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e0	-0.000e+00	1.0000	25785.0	39.97%	460.8	99.38%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-0.000e+00	1.0000	14075.0	21.82%	438.2	94.50%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	-0.000e+00	1.0000	4293.0	6.65%	412.9	89.03%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	-0.000e+00	1.0000	2058.0	3.19%	400.1	86.28%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-0.000e+00	1.0000	18215.0	28.23%	411.9	88.81%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e0	-0.000e+00	1.0000	4522.0	7.01%	403.5	87.00%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-0.000e+00	1.0000	2420.0	3.75%	394.7	85.10%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e0	-0.000e+00	1.0000	2418.0	3.75%	396.9	85.60%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-0.000e+00	1.0000	2414.0	3.74%	400.2	86.30%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e0	-0.000e+00	1.0000	10233.0	15.86%	406.4	87.64%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	-0.000e+00	1.0000	3880.0	6.01%	407.8	87.93%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-0.000e+00	1.0000	5681.0	8.81%	397.3	85.67%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-0.000e+00	1.0000	6365.0	9.87%	421.4	90.88%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-0.000e+00	1.0000	15457.0	23.96%	441.5	95.21%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-0.000e+00	1.0000	18574.0	28.79%	415.2	89.53%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-0.000e+00	1.0000	3304.0	5.12%	402.3	86.76%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	-0.000e+00	1.0000	6303.0	9.77%	426.4	91.96%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-0.000e+00	1.0000	1282.0	1.99%	364.7	78.66%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	-0.000e+00	1.0000	5631.0	8.73%	410.9	88.62%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-0.000e+00	1.0000	1120.0	1.74%	385.6	83.15%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-0.000e+00	1.0000	5594.0	8.67%	406.2	87.59%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-0.000e+00	1.0000	2792.0	4.33%	399.0	86.03%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e0	-0.000e+00	1.0000	2080.0	3.22%	382.4	82.47%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	-0.000e+00	1.0000	3455.0	5.36%	406.3	87.62%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	-0.000e+00	1.0000	2075.0	3.22%	385.0	83.03%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-0.000e+00	1.0000	5598.0	8.68%	404.3	87.19%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-0.000e+00	1.0000	5739.0	8.90%	397.9	85.80%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-0.000e+00	1.0000	5656.0	8.77%	409.1	88.23%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	-0.000e+00	1.0000	2367.0	3.67%	390.3	84.16%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	-0.000e+00	1.0000	11288.0	17.50%	428.8	92.48%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	-0.000e+00	1.0000	4525.0	7.01%	401.0	86.48%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	-0.000e+00	1.0000	1089.0	1.69%	370.1	79.81%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e0	-0.000e+00	1.0000	3455.0	5.36%	439.1	94.68%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-0.000e+00	1.0000	8221.0	12.74%	411.7	88.79%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e0	-0.000e+00	1.0000	7544.0	11.69%	407.7	87.91%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-0.000e+00	1.0000	10950.0	16.97%	402.0	86.69%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-0.000e+00	1.0000	34174.0	52.97%	444.8	95.93%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	-0.000e+00	1.0000	2199.0	3.41%	404.3	87.18%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e0	-0.000e+00	1.0000	440.0	0.68%	321.9	69.41%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-0.000e+00	1.0000	27894.0	43.24%	457.6	98.69%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-0.000e+00	1.0000	17426.0	27.01%	415.3	89.55%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-0.000e+00	1.0000	9084.0	14.08%	421.6	90.93%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	-0.000e+00	1.0000	10817.0	16.77%	450.2	97.09%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-0.000e+00	1.0000	10215.0	15.83%	448.1	96.63%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e0	-0.000e+00	1.0000	9522.0	14.76%	422.1	91.03%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-0.000e+00	1.0000	38411.0	59.54%	443.9	95.72%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e0	-0.000e+00	1.0000	38405.0	59.53%	449.2	96.88%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	-0.000e+00	1.0000	1819.0	2.82%	411.4	88.72%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e0	-0.000e+00	1.0000	3520.0	5.46%	407.9	87.97%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-0.000e+00	1.0000	10280.0	15.93%	419.1	90.37%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e0	-0.000e+00	1.0000	5367.0	8.32%	411.5	88.73%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	-0.000e+00	1.0000	52.0	0.08%	119.1	25.69%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	-0.000e+00	1.0000	1326.0	2.06%	380.5	82.05%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-0.000e+00	1.0000	8218.0	12.74%	428.3	92.37%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-0.000e+00	1.0000	1350.0	2.09%	362.1	78.09%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	-0.000e+00	1.0000	1324.0	2.05%	388.4	83.76%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-0.000e+00	1.0000	27042.0	41.92%	433.3	93.45%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-0.000e+00	1.0000	2378.0	3.69%	395.0	85.18%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e0	-0.000e+00	1.0000	4772.0	7.40%	410.0	88.41%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-0.000e+00	1.0000	161.0	0.25%	236.7	51.05%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	-0.000e+00	1.0000	516.0	0.80%	328.6	70.86%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	-0.000e+00	1.0000	1024.0	1.59%	358.3	77.27%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e0	-0.000e+00	1.0000	15434.0	23.92%	409.8	88.36%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	-0.000e+00	1.0000	280.0	0.43%	273.9	59.05%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e0	-0.000e+00	1.0000	9509.0	14.74%	426.2	91.90%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e0	-0.000e+00	1.0000	7501.0	11.63%	411.7	88.78%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e0	-0.000e+00	1.0000	14311.0	22.18%	428.6	92.42%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-0.000e+00	1.0000	6817.0	10.57%	422.9	91.20%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-0.000e+00	1.0000	1070.0	1.66%	386.0	83.23%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-0.000e+00	1.0000	740.0	1.15%	358.0	77.20%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	-0.000e+00	1.0000	762.0	1.18%	335.7	72.39%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e0	-0.000e+00	1.0000	9272.0	14.37%	406.8	87.72%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-0.000e+00	1.0000	926.0	1.44%	376.7	81.24%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	-0.000e+00	1.0000	62.0	0.10%	102.8	22.17%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	-0.000e+00	1.0000	4974.0	7.71%	403.5	87.01%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e0	-0.000e+00	1.0000	1892.0	2.93%	394.5	85.08%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	-0.000e+00	1.0000	5657.0	8.77%	415.2	89.53%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-0.000e+00	1.0000	2517.0	3.90%	402.6	86.81%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	-0.000e+00	1.0000	180.0	0.28%	250.0	53.91%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-0.000e+00	1.0000	732.0	1.13%	352.0	75.91%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e0	-0.000e+00	1.0000	10049.0	15.58%	427.1	92.10%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e0	-0.000e+00	1.0000	13591.0	21.07%	430.0	92.73%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-0.000e+00	1.0000	88.0	0.14%	143.7	30.98%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-0.000e+00	1.0000	5087.0	7.89%	421.2	90.83%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e0	-0.000e+00	1.0000	10853.0	16.82%	419.1	90.38%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-0.000e+00	1.0000	5447.0	8.44%	446.9	96.37%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	-0.000e+00	1.0000	857.0	1.33%	370.1	79.82%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-0.000e+00	1.0000	7569.0	11.73%	405.4	87.43%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-0.000e+00	1.0000	17398.0	26.97%	412.3	88.91%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-0.000e+00	1.0000	5075.0	7.87%	421.1	90.81%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	-0.000e+00	1.0000	1280.0	1.98%	389.9	84.09%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	-0.000e+00	1.0000	1542.0	2.39%	377.5	81.40%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e0	-0.000e+00	1.0000	10746.0	16.66%	447.7	96.55%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-0.000e+00	1.0000	15205.0	23.57%	418.7	90.28%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-0.000e+00	1.0000	521.0	0.81%	325.1	70.10%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e0	-0.000e+00	1.0000	537.0	0.83%	363.0	78.27%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-0.000e+00	1.0000	424.0	0.66%	326.6	70.43%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	-0.000e+00	1.0000	2981.0	4.62%	412.7	88.99%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-0.000e+00	1.0000	4320.0	6.70%	410.1	88.44%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	-0.000e+00	1.0000	3435.0	5.32%	407.9	87.97%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e0	-0.000e+00	1.0000	35.0	0.05%	90.1	19.43%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-0.000e+00	1.0000	2822.0	4.37%	400.5	86.36%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	-0.000e+00	1.0000	4245.0	6.58%	401.7	86.62%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-0.000e+00	1.0000	1563.0	2.42%	378.2	81.55%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e0	-0.000e+00	1.0000	4561.0	7.07%	398.1	85.85%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e0	-0.000e+00	1.0000	1884.0	2.92%	391.8	84.49%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-0.000e+00	1.0000	5899.0	9.14%	404.0	87.13%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-0.000e+00	1.0000	10135.0	15.71%	418.7	90.29%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-0.000e+00	1.0000	7265.0	11.26%	394.6	85.09%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	-0.000e+00	1.0000	2557.0	3.96%	398.2	85.88%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-0.000e+00	1.0000	10056.0	15.59%	410.4	88.49%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-0.000e+00	1.0000	1319.0	2.04%	374.6	80.79%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-0.000e+00	1.0000	1319.0	2.04%	374.6	80.79%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	-0.000e+00	1.0000	1334.0	2.07%	359.9	77.62%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	-0.000e+00	1.0000	10054.0	15.58%	417.0	89.92%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-0.000e+00	1.0000	596.0	0.92%	321.9	69.42%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-0.000e+00	1.0000	6295.0	9.76%	407.6	87.90%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e0	-0.000e+00	1.0000	5985.0	9.28%	409.8	88.37%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-0.000e+00	1.0000	11693.0	18.13%	429.2	92.55%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-0.000e+00	1.0000	4819.0	7.47%	391.3	84.39%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	-0.000e+00	1.0000	1202.0	1.86%	397.2	85.65%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-0.000e+00	1.0000	10420.0	16.15%	459.7	99.13%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	-0.000e+00	1.0000	8439.0	13.08%	434.9	93.78%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-0.000e+00	1.0000	12181.0	18.88%	422.4	91.09%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e0	-0.000e+00	1.0000	13720.0	21.27%	416.9	89.89%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e0	-0.000e+00	1.0000	5234.0	8.11%	401.9	86.66%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e0	-0.000e+00	1.0000	13534.0	20.98%	419.6	90.49%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e0	-0.000e+00	1.0000	2675.0	4.15%	402.9	86.89%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e0	-0.000e+00	1.0000	9055.0	14.04%	418.2	90.19%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-0.000e+00	1.0000	10577.0	16.40%	425.0	91.65%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e0	-0.000e+00	1.0000	15123.0	23.44%	418.3	90.19%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-0.000e+00	1.0000	5851.0	9.07%	402.6	86.82%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	-0.000e+00	1.0000	6307.0	9.78%	411.8	88.80%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e0	-0.000e+00	1.0000	4642.0	7.20%	401.2	86.52%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e0	-0.000e+00	1.0000	1930.0	2.99%	389.8	84.06%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	-0.000e+00	1.0000	3002.0	4.65%	408.8	88.16%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-0.000e+00	1.0000	1451.0	2.25%	386.7	83.38%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-0.000e+00	1.0000	7746.0	12.01%	401.3	86.54%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e0	-0.000e+00	1.0000	1358.0	2.11%	392.1	84.56%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e0	-0.000e+00	1.0000	1020.0	1.58%	337.9	72.87%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-0.000e+00	1.0000	2326.0	3.61%	394.0	84.96%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	-0.000e+00	1.0000	64354.0	99.75%	463.7	100.00%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	-0.000e+00	1.0000	7095.0	11.00%	420.9	90.76%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-0.000e+00	1.0000	3585.0	5.56%	400.2	86.30%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	-0.000e+00	1.0000	7927.0	12.29%	415.7	89.64%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-0.000e+00	1.0000	2004.0	3.11%	403.6	87.04%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e0	-0.000e+00	1.0000	3688.0	5.72%	405.3	87.39%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e0	-0.000e+00	1.0000	3691.0	5.72%	403.0	86.90%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	-0.000e+00	1.0000	6426.0	9.96%	428.2	92.33%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e0	-0.000e+00	1.0000	9434.0	14.62%	413.5	89.17%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e0	-0.000e+00	1.0000	4961.0	7.69%	407.6	87.90%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-0.000e+00	1.0000	2173.0	3.37%	391.2	84.36%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-0.000e+00	1.0000	2852.0	4.42%	410.9	88.62%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e0	-0.000e+00	1.0000	14032.0	21.75%	438.0	94.46%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-0.000e+00	1.0000	3880.0	6.01%	420.4	90.66%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e0	-0.000e+00	1.0000	1130.0	1.75%	358.9	77.39%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-0.000e+00	1.0000	3847.0	5.96%	416.6	89.84%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	-0.000e+00	1.0000	1502.0	2.33%	395.2	85.21%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	-0.000e+00	1.0000	1575.0	2.44%	391.1	84.34%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	-0.000e+00	1.0000	11162.0	17.30%	439.7	94.82%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	-0.000e+00	1.0000	3028.0	4.69%	415.6	89.62%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	-0.000e+00	1.0000	66.0	0.10%	147.3	31.77%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e0	-0.000e+00	1.0000	13256.0	20.55%	413.7	89.20%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-0.000e+00	1.0000	9230.0	14.31%	406.2	87.59%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e0	-0.000e+00	1.0000	14195.0	22.00%	432.2	93.20%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e0	-0.000e+00	1.0000	5623.0	8.72%	404.5	87.22%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-0.000e+00	1.0000	1187.0	1.84%	334.2	72.08%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	-0.000e+00	1.0000	4097.0	6.35%	391.1	84.33%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-0.000e+00	1.0000	1434.0	2.22%	395.3	85.25%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e0	-0.000e+00	1.0000	10045.0	15.57%	418.5	90.26%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e0	-0.000e+00	1.0000	10051.0	15.58%	412.7	89.00%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e0	-0.000e+00	1.0000	14686.0	22.76%	406.8	87.73%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e0	-0.000e+00	1.0000	9928.0	15.39%	425.5	91.75%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-0.000e+00	1.0000	2420.0	3.75%	398.1	85.86%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e0	-0.000e+00	1.0000	434.0	0.67%	286.3	61.73%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e0	-0.000e+00	1.0000	1728.0	2.68%	395.2	85.21%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-0.000e+00	1.0000	189.0	0.29%	257.3	55.48%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-0.000e+00	1.0000	3614.0	5.60%	403.2	86.94%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	-0.000e+00	1.0000	9102.0	14.11%	417.6	90.06%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-0.000e+00	1.0000	5200.0	8.06%	412.8	89.01%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	-0.000e+00	1.0000	2948.0	4.57%	393.5	84.86%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-0.000e+00	1.0000	598.0	0.93%	348.2	75.09%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-0.000e+00	1.0000	589.0	0.91%	357.3	77.06%
SeqBias: GA-repeat	GAGAGAGAGA	1e0	-0.000e+00	1.0000	54337.0	84.23%	455.0	98.11%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-0.000e+00	1.0000	508.0	0.79%	348.4	75.12%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-0.000e+00	1.0000	554.0	0.86%	302.7	65.27%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-0.000e+00	1.0000	1303.0	2.02%	377.9	81.50%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	-0.000e+00	1.0000	1218.0	1.89%	378.7	81.67%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-0.000e+00	1.0000	8420.0	13.05%	407.2	87.82%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	-0.000e+00	1.0000	3297.0	5.11%	389.8	84.06%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e0	-0.000e+00	1.0000	13512.0	20.94%	448.9	96.80%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e0	-0.000e+00	1.0000	4569.0	7.08%	409.1	88.22%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-0.000e+00	1.0000	10388.0	16.10%	407.6	87.89%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-0.000e+00	1.0000	1131.0	1.75%	384.8	82.98%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e0	-0.000e+00	1.0000	2805.0	4.35%	398.5	85.93%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-0.000e+00	1.0000	2674.0	4.14%	392.7	84.68%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-0.000e+00	1.0000	2964.0	4.59%	400.6	86.39%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	-0.000e+00	1.0000	562.0	0.87%	366.0	78.94%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	-0.000e+00	1.0000	17.0	0.03%	46.1	9.95%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	-0.000e+00	1.0000	1642.0	2.55%	383.0	82.59%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	-0.000e+00	1.0000	5244.0	8.13%	425.1	91.68%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	-0.000e+00	1.0000	152.0	0.24%	235.1	50.70%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e0	-0.000e+00	1.0000	2383.0	3.69%	397.1	85.62%
SeqBias: G/A bias	RRRRRRRRRR	1e0	-0.000e+00	1.0000	64375.0	99.79%	463.7	100.00%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e0	-0.000e+00	1.0000	12307.0	19.08%	422.6	91.14%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-0.000e+00	1.0000	221.0	0.34%	224.4	48.38%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e0	-0.000e+00	1.0000	12494.0	19.37%	411.3	88.70%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-0.000e+00	1.0000	7769.0	12.04%	415.1	89.52%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-0.000e+00	1.0000	587.0	0.91%	367.2	79.18%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-0.000e+00	1.0000	4605.0	7.14%	399.0	86.04%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-0.000e+00	1.0000	2744.0	4.25%	399.6	86.16%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-0.000e+00	1.0000	4959.0	7.69%	428.6	92.42%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-0.000e+00	1.0000	4073.0	6.31%	405.7	87.48%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	-0.000e+00	1.0000	1216.0	1.88%	388.4	83.76%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e0	-0.000e+00	1.0000	1222.0	1.89%	382.9	82.58%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	-0.000e+00	1.0000	3552.0	5.51%	415.7	89.65%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-0.000e+00	1.0000	4484.0	6.95%	412.3	88.91%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-0.000e+00	1.0000	10564.0	16.37%	424.0	91.44%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-0.000e+00	1.0000	6365.0	9.87%	411.9	88.83%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	-0.000e+00	1.0000	1384.0	2.15%	359.4	77.51%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-0.000e+00	1.0000	315.0	0.49%	353.6	76.25%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	-0.000e+00	1.0000	32.0	0.05%	95.4	20.56%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e0	-0.000e+00	1.0000	11209.0	17.37%	428.7	92.45%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-0.000e+00	1.0000	4504.0	6.98%	414.1	89.29%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-0.000e+00	1.0000	673.0	1.04%	350.0	75.47%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-0.000e+00	1.0000	2544.0	3.94%	404.5	87.23%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-0.000e+00	1.0000	14036.0	21.76%	424.2	91.48%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e0	-0.000e+00	1.0000	54415.0	84.35%	463.7	100.00%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-0.000e+00	1.0000	4600.0	7.13%	410.7	88.56%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	-0.000e+00	1.0000	5261.0	8.15%	423.1	91.25%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e0	-0.000e+00	1.0000	1822.0	2.82%	404.0	87.11%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	-0.000e+00	1.0000	2182.0	3.38%	398.6	85.96%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-0.000e+00	1.0000	15737.0	24.39%	452.5	97.58%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e0	-0.000e+00	1.0000	5751.0	8.91%	405.4	87.41%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	-0.000e+00	1.0000	637.0	0.99%	350.0	75.47%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	-0.000e+00	1.0000	2594.0	4.02%	415.9	89.69%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e0	-0.000e+00	1.0000	11081.0	17.18%	412.3	88.91%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e0	-0.000e+00	1.0000	567.0	0.88%	368.4	79.45%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e0	-0.000e+00	1.0000	8606.0	13.34%	414.6	89.40%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	-0.000e+00	1.0000	2898.0	4.49%	393.6	84.88%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	-0.000e+00	1.0000	797.0	1.24%	271.0	58.43%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	-0.000e+00	1.0000	261.0	0.40%	241.0	51.98%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-0.000e+00	1.0000	3687.0	5.72%	405.9	87.53%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-0.000e+00	1.0000	3531.0	5.47%	390.5	84.22%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-0.000e+00	1.0000	1814.0	2.81%	390.4	84.19%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-0.000e+00	1.0000	1798.0	2.79%	406.7	87.69%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-0.000e+00	1.0000	2849.0	4.42%	395.7	85.33%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e0	-0.000e+00	1.0000	9048.0	14.03%	414.0	89.28%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-0.000e+00	1.0000	2242.0	3.48%	393.3	84.81%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-0.000e+00	1.0000	11347.0	17.59%	447.5	96.51%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e0	-0.000e+00	1.0000	10263.0	15.91%	427.3	92.15%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e0	-0.000e+00	1.0000	1233.0	1.91%	400.9	86.45%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e0	-0.000e+00	1.0000	1971.0	3.06%	394.5	85.08%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-0.000e+00	1.0000	2703.0	4.19%	401.4	86.55%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	-0.000e+00	1.0000	7603.0	11.79%	410.2	88.45%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-0.000e+00	1.0000	175.0	0.27%	171.6	37.01%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e0	-0.000e+00	1.0000	169.0	0.26%	278.2	59.99%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e0	-0.000e+00	1.0000	3802.0	5.89%	401.9	86.67%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-0.000e+00	1.0000	513.0	0.80%	349.3	75.32%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-0.000e+00	1.0000	1654.0	2.56%	399.4	86.12%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	-0.000e+00	1.0000	874.0	1.35%	377.5	81.40%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-0.000e+00	1.0000	895.0	1.39%	374.7	80.80%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-0.000e+00	1.0000	3869.0	6.00%	398.1	85.84%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	-0.000e+00	1.0000	758.0	1.17%	367.4	79.23%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-0.000e+00	1.0000	948.0	1.47%	305.7	65.91%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-0.000e+00	1.0000	2046.0	3.17%	395.1	85.19%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e0	-0.000e+00	1.0000	3394.0	5.26%	403.5	87.01%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	-0.000e+00	1.0000	1144.0	1.77%	386.7	83.39%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-0.000e+00	1.0000	8232.0	12.76%	434.7	93.75%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e0	-0.000e+00	1.0000	1740.0	2.70%	401.7	86.63%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-0.000e+00	1.0000	2588.0	4.01%	395.9	85.37%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-0.000e+00	1.0000	2461.0	3.81%	399.0	86.05%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-0.000e+00	1.0000	7552.0	11.71%	410.5	88.52%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-0.000e+00	1.0000	4689.0	7.27%	416.5	89.81%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-0.000e+00	1.0000	2055.0	3.19%	378.0	81.52%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e0	-0.000e+00	1.0000	2693.0	4.17%	400.1	86.28%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	-0.000e+00	1.0000	406.0	0.63%	335.6	72.36%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-0.000e+00	1.0000	3673.0	5.69%	403.3	86.96%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-0.000e+00	1.0000	938.0	1.45%	389.6	84.01%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e0	-0.000e+00	1.0000	8800.0	13.64%	411.5	88.73%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	-0.000e+00	1.0000	11724.0	18.17%	437.3	94.29%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-0.000e+00	1.0000	5338.0	8.27%	397.0	85.62%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	-0.000e+00	1.0000	2141.0	3.32%	405.8	87.51%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-0.000e+00	1.0000	970.0	1.50%	379.6	81.85%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-0.000e+00	1.0000	582.0	0.90%	311.8	67.24%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e0	-0.000e+00	1.0000	64506.0	99.99%	463.7	100.00%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e0	-0.000e+00	1.0000	4765.0	7.39%	405.0	87.33%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	-0.000e+00	1.0000	2275.0	3.53%	403.6	87.02%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e0	-0.000e+00	1.0000	15914.0	24.67%	420.6	90.70%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-0.000e+00	1.0000	74.0	0.11%	188.8	40.71%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	-0.000e+00	1.0000	1991.0	3.09%	410.9	88.60%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-0.000e+00	1.0000	270.0	0.42%	292.1	62.99%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e0	-0.000e+00	1.0000	6023.0	9.34%	401.3	86.55%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e0	-0.000e+00	1.0000	1937.0	3.00%	393.0	84.75%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e0	-0.000e+00	1.0000	3471.0	5.38%	401.9	86.68%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	-0.000e+00	1.0000	1619.0	2.51%	383.1	82.60%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-0.000e+00	1.0000	1547.0	2.40%	384.5	82.91%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-0.000e+00	1.0000	2234.0	3.46%	398.0	85.82%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	-0.000e+00	1.0000	3.0	0.00%	20.3	4.38%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e0	-0.000e+00	1.0000	7721.0	11.97%	400.1	86.29%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e0	-0.000e+00	1.0000	6446.0	9.99%	412.4	88.92%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	-0.000e+00	1.0000	794.0	1.23%	354.7	76.48%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	-0.000e+00	1.0000	290.0	0.45%	326.1	70.33%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-0.000e+00	1.0000	3875.0	6.01%	409.0	88.21%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-0.000e+00	1.0000	7950.0	12.32%	410.4	88.50%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	-0.000e+00	1.0000	965.0	1.50%	366.7	79.08%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	-0.000e+00	1.0000	2385.0	3.70%	405.9	87.54%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-0.000e+00	1.0000	7514.0	11.65%	411.8	88.80%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	-0.000e+00	1.0000	835.0	1.29%	373.9	80.64%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-0.000e+00	1.0000	354.0	0.55%	322.7	69.60%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-0.000e+00	1.0000	2322.0	3.60%	386.1	83.26%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e0	-0.000e+00	1.0000	828.0	1.28%	373.3	80.49%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-0.000e+00	1.0000	3652.0	5.66%	398.1	85.84%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-0.000e+00	1.0000	275.0	0.43%	248.0	53.48%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-0.000e+00	1.0000	855.0	1.33%	381.1	82.17%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	-0.000e+00	1.0000	753.0	1.17%	375.7	81.02%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	-0.000e+00	1.0000	6704.0	10.39%	404.5	87.23%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-0.000e+00	1.0000	3805.0	5.90%	403.7	87.06%
SeqBias: A/T bias	WWWWWWWWWW	1e0	-0.000e+00	1.0000	61782.0	95.77%	463.4	99.92%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e0	-0.000e+00	1.0000	7104.0	11.01%	413.1	89.07%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-0.000e+00	1.0000	3569.0	5.53%	403.8	87.07%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-0.000e+00	1.0000	3221.0	4.99%	401.3	86.54%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e0	-0.000e+00	1.0000	4046.0	6.27%	395.4	85.26%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	-0.000e+00	1.0000	6675.0	10.35%	418.6	90.27%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-0.000e+00	1.0000	4843.0	7.51%	409.0	88.20%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-0.000e+00	1.0000	4838.0	7.50%	413.3	89.12%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	-0.000e+00	1.0000	932.0	1.44%	371.7	80.15%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e0	-0.000e+00	1.0000	1828.0	2.83%	396.8	85.56%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-0.000e+00	1.0000	4261.0	6.60%	405.6	87.46%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-0.000e+00	1.0000	2107.0	3.27%	383.3	82.67%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	-0.000e+00	1.0000	175.0	0.27%	166.5	35.90%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-0.000e+00	1.0000	2007.0	3.11%	389.8	84.06%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-0.000e+00	1.0000	1648.0	2.55%	394.9	85.16%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-0.000e+00	1.0000	73.0	0.11%	131.6	28.38%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	-0.000e+00	1.0000	48.0	0.07%	156.9	33.83%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-0.000e+00	1.0000	9724.0	15.07%	418.9	90.32%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e0	-0.000e+00	1.0000	8705.0	13.49%	403.5	87.02%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-0.000e+00	1.0000	3932.0	6.09%	396.9	85.59%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-0.000e+00	1.0000	8919.0	13.83%	429.7	92.67%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-0.000e+00	1.0000	3273.0	5.07%	406.6	87.69%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-0.000e+00	1.0000	178.0	0.28%	249.6	53.83%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	-0.000e+00	1.0000	799.0	1.24%	352.7	76.06%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-0.000e+00	1.0000	5237.0	8.12%	401.3	86.54%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	-0.000e+00	1.0000	2989.0	4.63%	422.1	91.03%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-0.000e+00	1.0000	3113.0	4.83%	391.1	84.35%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-0.000e+00	1.0000	2309.0	3.58%	397.8	85.78%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-0.000e+00	1.0000	4782.0	7.41%	408.7	88.14%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	-0.000e+00	1.0000	1380.0	2.14%	404.5	87.22%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-0.000e+00	1.0000	2477.0	3.84%	394.7	85.12%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e0	-0.000e+00	1.0000	4636.0	7.19%	402.5	86.79%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-0.000e+00	1.0000	1194.0	1.85%	400.3	86.32%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e0	-0.000e+00	1.0000	6917.0	10.72%	416.8	89.88%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e0	-0.000e+00	1.0000	1921.0	2.98%	388.8	83.84%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	-0.000e+00	1.0000	2018.0	3.13%	371.2	80.04%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-0.000e+00	1.0000	297.0	0.46%	308.1	66.45%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-0.000e+00	1.0000	7837.0	12.15%	409.5	88.31%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-0.000e+00	1.0000	593.0	0.92%	358.4	77.29%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	-0.000e+00	1.0000	4400.0	6.82%	404.4	87.20%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	-0.000e+00	1.0000	1397.0	2.17%	390.5	84.21%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-0.000e+00	1.0000	911.0	1.41%	373.0	80.43%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-0.000e+00	1.0000	897.0	1.39%	382.9	82.56%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-0.000e+00	1.0000	942.0	1.46%	337.1	72.69%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	-0.000e+00	1.0000	239.0	0.37%	296.7	63.98%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e0	-0.000e+00	1.0000	6300.0	9.77%	413.0	89.07%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-0.000e+00	1.0000	2911.0	4.51%	410.0	88.41%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	-0.000e+00	1.0000	23.0	0.04%	69.2	14.91%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	-0.000e+00	1.0000	948.0	1.47%	372.2	80.27%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-0.000e+00	1.0000	5548.0	8.60%	397.8	85.78%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-0.000e+00	1.0000	11737.0	18.19%	406.5	87.65%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	-0.000e+00	1.0000	160.0	0.25%	179.0	38.60%
SeqBias: polyC-repeat	CCCCCCCCCC	1e0	-0.000e+00	1.0000	63732.0	98.79%	463.4	99.93%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e0	-0.000e+00	1.0000	6373.0	9.88%	409.3	88.27%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-0.000e+00	1.0000	7386.0	11.45%	401.0	86.48%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-0.000e+00	1.0000	5254.0	8.14%	395.4	85.27%
 Ik-1	NHTTGGGAATRCC	1e0	0.000e+00	1.0000	64513.0	100.00%	463.7	100.00%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	0.000e+00	1.0000	430.0	0.67%	355.5	76.67%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	0.000e+00	1.0000	1417.0	2.20%	386.8	83.42%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	0.000e+00	1.0000	1408.0	2.18%	395.9	85.37%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	0.000e+00	1.0000	315.0	0.49%	322.2	69.48%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	2272.0	3.52%	390.4	84.19%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	0.000e+00	1.0000	2957.0	4.58%	408.2	88.02%
SeqBias: C/A-bias	MMMMMMMMMM	1e0	0.000e+00	1.0000	64495.0	99.97%	463.7	100.00%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e0	0.000e+00	1.0000	1524.0	2.36%	390.1	84.12%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	0.000e+00	1.0000	6289.0	9.75%	400.4	86.34%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	0.000e+00	1.0000	1988.0	3.08%	405.3	87.40%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	0.000e+00	1.0000	7091.0	10.99%	414.0	89.27%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e0	0.000e+00	1.0000	11148.0	17.28%	425.7	91.81%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e0	0.000e+00	1.0000	6817.0	10.57%	417.3	90.00%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	0.000e+00	1.0000	9342.0	14.48%	432.9	93.34%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e0	0.000e+00	1.0000	2485.0	3.85%	408.5	88.10%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	0.000e+00	1.0000	703.0	1.09%	349.3	75.34%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	0.000e+00	1.0000	1384.0	2.15%	422.3	91.06%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e0	0.000e+00	1.0000	2392.0	3.71%	399.7	86.19%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	0.000e+00	1.0000	1800.0	2.79%	387.8	83.63%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	0.000e+00	1.0000	2872.0	4.45%	398.4	85.90%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	0.000e+00	1.0000	399.0	0.62%	268.7	57.93%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e0	0.000e+00	1.0000	7687.0	11.92%	410.4	88.50%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e0	0.000e+00	1.0000	1287.0	1.99%	387.6	83.59%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e0	0.000e+00	1.0000	1884.0	2.92%	408.2	88.02%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	2973.0	4.61%	389.0	83.88%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	0.000e+00	1.0000	5548.0	8.60%	423.2	91.25%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	0.000e+00	1.0000	1472.0	2.28%	379.8	81.89%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	0.000e+00	1.0000	2125.0	3.29%	397.1	85.63%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	839.0	1.30%	375.7	81.02%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	0.000e+00	1.0000	2813.0	4.36%	391.3	84.38%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	0.000e+00	1.0000	1281.0	1.99%	366.8	79.09%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	0.000e+00	1.0000	848.0	1.31%	344.0	74.19%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e0	0.000e+00	1.0000	2282.0	3.54%	397.5	85.71%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	0.000e+00	1.0000	891.0	1.38%	352.7	76.05%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e0	0.000e+00	1.0000	1368.0	2.12%	389.9	84.08%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	0.000e+00	1.0000	3237.0	5.02%	401.7	86.63%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	0.000e+00	1.0000	3083.0	4.78%	399.8	86.22%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	3115.0	4.83%	367.2	79.18%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	0.000e+00	1.0000	808.0	1.25%	363.4	78.36%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	0.000e+00	1.0000	3900.0	6.05%	402.3	86.76%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	0.000e+00	1.0000	1032.0	1.60%	375.8	81.03%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	0.000e+00	1.0000	1543.0	2.39%	400.6	86.38%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	0.000e+00	1.0000	1553.0	2.41%	390.9	84.29%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	0.000e+00	1.0000	1288.0	2.00%	385.2	83.06%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	0.000e+00	1.0000	1833.0	2.84%	369.6	79.69%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	1104.0	1.71%	393.6	84.87%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	599.0	0.93%	346.6	74.73%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	0.000e+00	1.0000	2060.0	3.19%	406.3	87.61%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	1013.0	1.57%	332.7	71.74%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	0.000e+00	1.0000	9359.0	14.51%	407.3	87.82%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e0	0.000e+00	1.0000	4932.0	7.64%	407.9	87.96%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	0.000e+00	1.0000	155.0	0.24%	208.2	44.89%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	0.000e+00	1.0000	3368.0	5.22%	403.4	86.99%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	0.000e+00	1.0000	1495.0	2.32%	377.8	81.47%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	891.0	1.38%	328.3	70.79%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	0.000e+00	1.0000	2254.0	3.49%	396.1	85.42%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	1536.0	2.38%	401.9	86.66%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	0.000e+00	1.0000	960.0	1.49%	359.3	77.47%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	0.000e+00	1.0000	511.0	0.79%	334.5	72.12%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e0	0.000e+00	1.0000	6175.0	9.57%	408.6	88.11%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	0.000e+00	1.0000	432.0	0.67%	349.0	75.26%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	762.0	1.18%	327.5	70.63%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	0.000e+00	1.0000	3677.0	5.70%	396.3	85.47%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e0	0.000e+00	1.0000	4208.0	6.52%	415.7	89.65%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e0	0.000e+00	1.0000	2432.0	3.77%	402.3	86.76%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	0.000e+00	1.0000	2434.0	3.77%	400.9	86.46%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	0.000e+00	1.0000	2794.0	4.33%	402.6	86.82%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e0	0.000e+00	1.0000	2796.0	4.33%	400.1	86.28%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	0.000e+00	1.0000	786.0	1.22%	366.6	79.05%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e0	0.000e+00	1.0000	7745.0	12.01%	415.6	89.63%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	0.000e+00	1.0000	2711.0	4.20%	411.8	88.79%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	0.000e+00	1.0000	4420.0	6.85%	415.9	89.69%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	0.000e+00	1.0000	508.0	0.79%	366.0	78.92%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	0.000e+00	1.0000	1810.0	2.81%	398.0	85.82%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	0.000e+00	1.0000	160.0	0.25%	238.1	51.34%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	0.000e+00	1.0000	4976.0	7.71%	423.6	91.34%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	0.000e+00	1.0000	1810.0	2.81%	393.9	84.93%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	0.000e+00	1.0000	3584.0	5.56%	405.4	87.42%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	0.000e+00	1.0000	3597.0	5.58%	392.1	84.56%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e0	0.000e+00	1.0000	1229.0	1.91%	388.8	83.83%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	0.000e+00	1.0000	4723.0	7.32%	418.8	90.30%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e0	0.000e+00	1.0000	4163.0	6.45%	406.7	87.71%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e0	0.000e+00	1.0000	762.0	1.18%	378.0	81.51%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	0.000e+00	1.0000	822.0	1.27%	312.7	67.43%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	0.000e+00	1.0000	823.0	1.28%	358.0	77.20%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	0.000e+00	1.0000	2256.0	3.50%	391.1	84.34%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	492.0	0.76%	206.0	44.42%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	0.000e+00	1.0000	1338.0	2.07%	397.9	85.81%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	0.000e+00	1.0000	2368.0	3.67%	401.0	86.47%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e0	0.000e+00	1.0000	1667.0	2.58%	393.8	84.92%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	0.000e+00	1.0000	3614.0	5.60%	396.8	85.56%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	0.000e+00	1.0000	1691.0	2.62%	389.7	84.05%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	0.000e+00	1.0000	2650.0	4.11%	398.5	85.93%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	0.000e+00	1.0000	1177.0	1.82%	372.5	80.32%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	100.0	0.16%	117.5	25.34%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	0.000e+00	1.0000	2234.0	3.46%	410.9	88.61%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	0.000e+00	1.0000	1389.0	2.15%	396.4	85.47%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	1182.0	1.83%	390.8	84.28%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e0	0.000e+00	1.0000	1699.0	2.63%	391.2	84.36%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	0.000e+00	1.0000	1728.0	2.68%	356.4	76.86%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	0.000e+00	1.0000	816.0	1.26%	337.4	72.75%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	0.000e+00	1.0000	2473.0	3.83%	400.3	86.32%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	432.0	0.67%	362.0	78.07%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	0.000e+00	1.0000	417.0	0.65%	377.9	81.50%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	0.000e+00	1.0000	479.0	0.74%	315.8	68.09%