chr1	591272	591273	chunk0001_2_1	33.3864	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	590990	591452	-248364970	+	L1MA4	LINE	L1	5606	6067	-233	6
chr1	1005546	1005547	chunk0001_11_1	4.93365	AR_DHT_Control	chr1	1005446	1005607	-247950815	-	MLT1H	LTR	ERVL-MaLR	-294	255	48	1
chr1	1504929	1504930	chunk0001_37_1	18.93863	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	1504925	1504950	-247451472	+	(GT)n	Simple_repeat	Simple_repeat	1	25	0	1
chr1	1577498	1577499	chunk0001_39_1	5.0408	AR_DHT_Control	chr1	1577276	1578972	-247377450	+	MER52A	LTR	ERV1	1	1755	0	1
chr1	1847442	1847443	chunk0001_47_1	8.24382	AR_DHT_Control	chr1	1846859	1848097	-247108325	+	Tigger2	DNA	TcMar-Tigger	984	2245	-473	2
chr1	1892727	1892728	chunk0001_51_1	23.1729	AR_DHT_Control	chr1	1892469	1892852	-247063570	-	L1MC4a	LINE	L1	-970	6912	6476	2
chr1	2002004	2002005	chunk0001_55_1	11.1716	AR_DHT_Control	chr1	2001625	2002260	-246954162	+	L1MC4	LINE	L1	7291	8036	-6	2
chr1	2044077	2044078	chunk0001_56_1	29.1606	AR_DHT_Control	chr1	2043981	2044297	-246912125	+	(CA)n	Simple_repeat	Simple_repeat	1	322	0	2
chr1	2121300	2121301	chunk0001_59_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2121151	2121339	-246835083	-	MLT-int	LTR	ERVL-MaLR	-26	1709	1496	2
chr1	2410986	2410987	chunk0001_66_1	328.9341	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	2410985	2411033	-246545389	+	L2	LINE	L2	2821	2868	-551	3
chr1	2535221	2535222	chunk0001_76_1	6.03438	AR_DHT_Control	chr1	2535100	2535247	-246421175	-	MIRb	SINE	MIR	-81	187	58	3
chr1	2583995	2583996	chunk0001_78_1	7.30485	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2583978	2584292	-246372130	+	MLT1I	LTR	ERVL-MaLR	64	394	-17	3
chr1	2630771	2630772	chunk0001_81_1	15.16531	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2630261	2631097	-246325325	+	(GT)n	Simple_repeat	Simple_repeat	1	845	0	3
chr1	2795829	2795830	chunk0001_88_1	78.11095	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2795742	2795910	-246160512	-	LTR106_Mam	LTR	LTR	-172	536	366	3
chr1	2896946	2896947	chunk0001_91_1	7.99358	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	2896562	2897217	-246059205	+	(CA)n	Simple_repeat	Simple_repeat	2	645	0	3
chr1	2938115	2938116	chunk0001_92_1	11.03006	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	2937860	2938534	-246017888	+	(AC)n	Simple_repeat	Simple_repeat	1	676	0	3
chr1	3114469	3114470	chunk0001_94_1	6.83133	AR_DHT_Control	chr1	3114138	3114510	-245841912	+	(CA)n	Simple_repeat	Simple_repeat	1	368	0	3
chr1	3334097	3334098	chunk0001_98_1	146.3148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	3334079	3334155	-245622267	+	MIRc	SINE	MIR	76	152	-116	3
chr1	3444242	3444243	chunk0001_104_1	6.54253	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	3443781	3444279	-245512143	-	L1MC1	LINE	L1	-479	5854	5333	3
chr1	3767805	3767806	chunk0001_112_1	8.06501	AR_DHT_Control	chr1	3767798	3767921	-245188501	-	MIR	SINE	MIR	-15	247	124	4
chr1	4144574	4144575	chunk0001_118_1	31.16983	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr1	4144323	4144933	-244811489	+	(TCA)n	Simple_repeat	Simple_repeat	1	617	0	4
chr1	4674306	4674307	chunk0001_126_1	5.51262	AR_DHT_Control	chr1	4674277	4674319	-244282103	+	MER58A	DNA	hAT-Charlie	42	82	-142	5
chr1	4754342	4754343	chunk0001_129_1	6.37684	AR_DHT_Control	chr1	4754063	4754385	-244202037	+	MER58B	DNA	hAT-Charlie	1	341	0	5
chr1	5586933	5586934	chunk0001_134_1	36.2155	AR_DHT_Control	chr1	5586899	5587031	-243369391	+	LTR79	LTR	ERVL	29	163	-364	6
chr1	5688742	5688743	chunk0001_139_1	17.77048	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	5688739	5688834	-243267588	+	(GT)n	Simple_repeat	Simple_repeat	1	95	0	7
chr1	5949475	5949476	chunk0001_143_1	6.94497	AR_DHT_Control	chr1	5949409	5949545	-243006877	-	L2a	LINE	L2	-2	3424	3275	7
chr1	5979312	5979313	chunk0001_145_1	8.90508	AR_DHT_Control	chr1	5979183	5979511	-242976911	-	L2a	LINE	L2	0	3426	2986	7
chr1	6052785	6052786	chunk0001_148_1	10.0524	AR_DHT_Control	chr1	6052768	6052920	-242903502	-	MER53	DNA	hAT	-28	165	1	7
chr1	6295369	6295370	chunk0001_158_1	55.65199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	6295271	6295906	-242660516	+	L1MB8	LINE	L1	5452	6121	-57	7
chr1	6352915	6352916	chunk0001_161_1	8.8292	AR_DHT_Control	chr1	6352868	6353161	-242603261	-	AluSx	SINE	Alu	-2	310	1	8
chr1	6399019	6399020	chunk0001_164_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	6398769	6399550	-242556872	+	L2a	LINE	L2	2300	3420	-6	8
chr1	6811708	6811709	chunk0001_171_1	5.69226	AR_DHT_Control	chr1	6811266	6811813	-242144609	-	Tigger15a	DNA	TcMar-Tigger	-135	580	20	8
chr1	6863063	6863064	chunk0001_172_1	9.63462	AR_DHT_Control	chr1	6863008	6863340	-242093082	-	L1MA9	LINE	L1	-5	6307	5980	9
chr1	6902914	6902915	chunk0001_174_1	75.7628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	6902666	6903409	-242053013	+	L1ME2	LINE	L1	5335	6164	0	9
chr1	6928941	6928942	chunk0001_177_1	54.11072	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	6928614	6928973	-242027449	+	L2b	LINE	L2	2966	3362	-13	9
chr1	7060248	7060249	chunk0001_180_1	5.77762	AR_DHT_Control	chr1	7060142	7060546	-241895876	-	MLT1B	LTR	ERVL-MaLR	-1	389	1	9
chr1	7199061	7199062	chunk0001_181_1	95.2078	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	7198925	7199137	-241757285	+	L2a	LINE	L2	3205	3425	-1	9
chr1	7270686	7270687	chunk0001_185_1	25.93864	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	7270595	7270699	-241685723	+	L1MB7	LINE	L1	1765	1868	-4532	9
chr1	7340180	7340181	chunk0001_188_1	39.16557	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	7340026	7340244	-241616178	-	MER58A	DNA	hAT-Charlie	0	224	7	9
chr1	7418595	7418596	chunk0001_190_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	7418497	7419034	-241537388	+	L2	LINE	L2	2276	2901	-518	9
chr1	7572180	7572181	chunk0001_192_1	4.57744	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	7571343	7572660	-241383762	-	L1PREC2	LINE	L1	-12	6148	4833	1
chr1	7717983	7717984	chunk0001_198_1	88.13599	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	7717924	7718040	-241238382	-	L2b	LINE	L2	-2	3373	3259	1
chr1	7890862	7890863	chunk0001_204_1	43.8234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	7890861	7891143	-241065279	+	L1ME1	LINE	L1	5621	5899	-280	1
chr1	8244506	8244507	chunk0001_235_1	104.2961	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	8244431	8244646	-240711776	+	MER58A	DNA	hAT-Charlie	4	224	0	1
chr1	8266858	8266859	chunk0001_240_1	59.3176	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	8266626	8267197	-240689225	-	LTR24C	LTR	ERV1	-2	633	24	1
chr1	8391396	8391397	chunk0001_249_1	4.83532	AR_DHT_Control	chr1	8391393	8391753	-240564669	+	L2c	LINE	L2	2910	3295	-92	1
chr1	8487051	8487052	chunk0001_264_1	19.40012	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	8486790	8487300	-240469122	+	L1ME1	LINE	L1	3496	4017	-2129	1
chr1	8548315	8548316	chunk0001_267_1	10.12	AR_DHT_Control	chr1	8547314	8548702	-240407720	+	L1MC4a	LINE	L1	5036	6550	-1332	1
chr1	8603380	8603381	chunk0001_269_1	15.11637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	8603215	8603634	-240352788	+	Charlie29a	DNA	hAT-Charlie	182	600	-119	1
chr1	8788822	8788823	chunk0001_288_1	8.0668	AR_DHT_Control	chr1	8788727	8789052	-240167370	-	L2b	LINE	L2	-13	3362	3023	1
chr1	8890299	8890300	chunk0001_292_1	12.07685	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	8890292	8890333	-240066089	-	Alu	SINE	Alu	0	301	261	1
chr1	9002369	9002370	chunk0001_295_1	81.5387	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	9001819	9002808	-239953614	+	LTR5B	LTR	ERVK	1	1002	0	1
chr1	9027573	9027574	chunk0001_297_1	88.2689	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	9027339	9027574	-239928848	-	L1PA14	LINE	L1	0	6161	5923	1
chr1	9076483	9076484	chunk0001_302_1	18.14882	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	9076346	9076540	-239879882	+	Tigger9a	DNA	TcMar-Tigger	536	731	-1	1
chr1	9238712	9238713	chunk0001_308_1	9.33116	AR_DHT_Control	chr1	9237840	9238779	-239717643	-	L2a	LINE	L2	0	3426	2339	1
chr1	9303375	9303376	chunk0001_310_1	6.06371	AR_DHT_Control	chr1	9302648	9303809	-239652613	+	ERVL-int	LTR	ERVL	4591	5756	-1	1
chr1	9325630	9325631	chunk0001_311_1	5.73594	AR_DHT_Control	chr1	9325567	9325992	-239630430	-	L2a	LINE	L2	-3	3423	2951	1
chr1	9331837	9331838	chunk0001_312_1	19.4003	AR_DHT_Control	chr1	9331781	9331952	-239624470	-	L1M5	LINE	L1	-646	5478	5312	1
chr1	9435292	9435293	chunk0001_318_1	10.416	AR_DHT_Control	chr1	9435135	9435410	-239521012	-	CR1-3_Croc	LINE	CR1	-1267	2338	2101	1
chr1	9668341	9668342	chunk0001_340_1	43.992	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	9668192	9668437	-239287985	+	MIR	SINE	MIR	7	262	0	1
chr1	9746817	9746818	chunk0001_342_1	188.3418	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	9746727	9746897	-239209525	+	MIR	SINE	MIR	78	222	-46	1
chr1	9815313	9815314	chunk0001_346_1	45.28853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	9815247	9815409	-239141013	+	L3	LINE	CR1	3930	4083	-16	1
chr1	9826055	9826056	chunk0001_349_1	9.9328	AR_DHT_Control	chr1	9825947	9826156	-239130266	+	MIRb	SINE	MIR	12	250	-12	1
chr1	10046159	10046160	chunk0001_363_1	6.7814	AR_DHT_Control	chr1	10045892	10046261	-238910161	-	MLT1J	LTR	ERVL-MaLR	-30	482	71	1
chr1	10056441	10056442	chunk0001_364_1	17.41301	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	10056408	10056565	-238899857	-	L2a	LINE	L2	-1	3425	3268	1
chr1	10489985	10489986	chunk0001_380_1	12.98693	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	10489280	10490010	-238466412	-	L1ME2	LINE	L1	-5562	838	38	1
chr1	10523176	10523177	chunk0001_386_1	7.20445	AR_DHT_Control	chr1	10522827	10523354	-238433068	-	Tigger15a	DNA	TcMar-Tigger	-105	610	64	1
chr1	10661992	10661993	chunk0001_392_1	4.62745	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	10661368	10662760	-238293662	+	(AC)n	Simple_repeat	Simple_repeat	1	1420	0	1
chr1	10666035	10666036	chunk0001_393_1	8.94637	AR_DHT_Control	chr1	10665927	10666052	-238290370	-	MIR	SINE	MIR	-119	143	14	1
chr1	10893333	10893334	chunk0001_404_1	18.82274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	10893306	10893461	-238062961	+	L2a	LINE	L2	3198	3364	-62	1
chr1	11282113	11282114	chunk0001_426_1	10.17629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11281555	11282307	-237674115	-	L1ME2	LINE	L1	0	6164	5433	1
chr1	11422247	11422248	chunk0001_433_1	25.62511	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	11422101	11422333	-237534089	+	L2a	LINE	L2	3183	3426	0	1
chr1	11586428	11586429	chunk0001_440_1	9.01771	AR_DHT_Control	chr1	11586202	11586452	-237369970	-	MIRb	SINE	MIR	-15	253	3	1
chr1	11606415	11606416	chunk0001_441_1	11.4219	AR_DHT_Control	chr1	11606375	11606646	-237349776	-	L2b	LINE	L2	-338	3081	2802	1
chr1	11732205	11732206	chunk0001_442_1	23.04386	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11732108	11732287	-237224135	+	MIR	SINE	MIR	14	197	-65	1
chr1	11759479	11759480	chunk0001_446_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11759382	11759515	-237196907	-	MIRc	SINE	MIR	0	268	145	1
chr1	11808543	11808544	chunk0001_448_1	8.06943	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11808393	11808790	-237147632	-	L1MC5	LINE	L1	-149	9155	8731	1
chr1	11813007	11813008	chunk0001_449_1	91.0628	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	11812713	11813290	-237143132	+	LTR48B	LTR	ERV1	1	644	0	1
chr1	11890829	11890830	chunk0002_1_1	8.84892	AR_DHT_Control	chr1	11890698	11891158	-237065264	+	LTR5B	LTR	ERVK	548	1002	0	1
chr1	12049875	12049876	chunk0002_7_1	93.378	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	12049821	12049919	-236906503	+	LTR40a	LTR	ERVL	96	200	-319	1
chr1	12157947	12157948	chunk0002_8_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	12157926	12157977	-236798445	+	L1ME5	LINE	L1	6132	6182	-12	1
chr1	12189039	12189040	chunk0002_12_1	184.6974	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	12188987	12189159	-236767263	+	L2c	LINE	L2	2987	3162	-225	1
chr1	12202380	12202381	chunk0002_13_1	4.73293	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	12202224	12202619	-236753803	+	L2c	LINE	L2	2925	3348	-39	1
chr1	12376528	12376529	chunk0002_24_1	8.35991	AR_DHT_Control	chr1	12376443	12376662	-236579760	-	MIR	SINE	MIR	-4	258	23	1
chr1	12677856	12677857	chunk0002_47_1	26.23121	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	12677808	12677940	-236278482	-	MER70C	LTR	ERVL	-31	500	369	2
chr1	12722732	12722733	chunk0002_48_1	7.53305	AR_DHT_Control	chr1	12722690	12722760	-236233662	+	MER102a	DNA	hAT-Charlie	71	141	-189	2
chr1	13663267	13663268	chunk0002_55_1	30.6771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	13662928	13663328	-235293094	+	L1ME3F	LINE	L1	5709	6125	-118	2
chr1	13832385	13832386	chunk0002_62_1	8.90491	AR_DHT_Control	chr1	13832292	13832458	-235123964	-	MIR	SINE	MIR	0	268	68	2
chr1	13860125	13860126	chunk0002_63_1	20.64581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	13859937	13860749	-235095673	-	HAL1	LINE	L1	-312	2195	1352	2
chr1	13871667	13871668	chunk0002_65_1	25.90397	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	13871496	13871753	-235084669	+	MER58B	DNA	hAT-Charlie	77	341	0	2
chr1	13958114	13958115	chunk0002_68_1	37.28294	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	13958056	13958288	-234998134	-	L2b	LINE	L2	0	3426	3199	2
chr1	14159741	14159742	chunk0002_75_1	7.92341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	14158074	14160688	-234795734	-	L1MA2	LINE	L1	-4895	2670	16	2
chr1	14271964	14271965	chunk0002_79_1	6.18774	AR_DHT_Control	chr1	14271947	14272024	-234684398	+	MIRb	SINE	MIR	121	202	-66	2
chr1	14427009	14427010	chunk0002_84_1	24.11965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	14426922	14427187	-234529235	-	L2b	LINE	L2	-2	3373	3110	2
chr1	14499044	14499045	chunk0002_87_1	66.9939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	14498720	14499073	-234457349	+	LTR33	LTR	ERVL	155	515	0	2
chr1	14947597	14947598	chunk0002_95_1	46.1287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	14947594	14947804	-234008618	+	MIR	SINE	MIR	13	244	-18	2
chr1	14965543	14965544	chunk0002_99_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	14965472	14965673	-233990749	-	L1ME4a	LINE	L1	-236	5888	5724	2
chr1	15179375	15179376	chunk0002_100_1	9.21264	AR_DHT_Control	chr1	15179172	15179501	-233776921	+	L1ME2	LINE	L1	5594	5934	-230	2
chr1	15626299	15626300	chunk0002_106_1	20.90451	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	15626133	15626624	-233329798	-	L2a	LINE	L2	0	3426	2781	2
chr1	15628871	15628872	chunk0002_108_1	34.1602	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	15628703	15628974	-233327448	-	L1MB7	LINE	L1	0	6184	5890	2
chr1	15820980	15820981	chunk0002_111_1	60.1668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	15820772	15820987	-233135435	+	AluJr	SINE	Alu	85	302	-10	2
chr1	16068979	16068980	chunk0002_114_1	12.3053	AR_DHT_Control	chr1	16068941	16069201	-232887221	-	MIRb	SINE	MIR	-9	259	9	2
chr1	16121093	16121094	chunk0002_117_1	28.9107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	16121040	16121209	-232835213	+	MIR	SINE	MIR	90	260	-2	2
chr1	16559820	16559821	chunk0002_126_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	16559708	16559974	-232396448	-	AluSq2	SINE	Alu	-3	310	50	2
chr1	17012146	17012147	chunk0002_139_1	7.36432	AR_DHT_Control	chr1	17012089	17012262	-231944160	+	MIRb	SINE	MIR	25	207	-61	2
chr1	17237048	17237049	chunk0002_142_1	9.21264	AR_DHT_Control	chr1	17237022	17237134	-231719288	+	MIR	SINE	MIR	127	244	-18	2
chr1	17866885	17866886	chunk0002_149_1	6.48643	AR_DHT_Control	chr1	17866728	17866909	-231089513	+	MIR3	SINE	MIR	16	198	-10	3
chr1	18059444	18059445	chunk0002_155_1	30.70558	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	18059215	18059655	-230896767	-	MLT1C	LTR	ERVL-MaLR	-12	455	1	3
chr1	18165707	18165708	chunk0002_156_1	17.67436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	18165572	18166162	-230790260	+	LTR10C	LTR	ERV1	1	591	0	3
chr1	18166536	18166537	chunk0002_157_1	5.86499	AR_DHT_Control	chr1	18166349	18166598	-230789824	+	MIRb	SINE	MIR	4	250	-18	3
chr1	18298879	18298880	chunk0002_162_1	45.7629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	18298825	18298951	-230657471	+	L2a	LINE	L2	3287	3421	-5	3
chr1	18417435	18417436	chunk0002_163_1	29.948	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	18417435	18418010	-230538412	-	MER34C_	LTR	ERV1	-6	579	1	3
chr1	18440744	18440745	chunk0002_164_1	12.1095	AR_DHT_Control	chr1	18440744	18441113	-230515309	+	MER74A	LTR	ERVL	171	549	-9	3
chr1	18945052	18945053	chunk0002_173_1	53.11177	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	18945049	18945198	-230011224	+	L2c	LINE	L2	3032	3187	-200	3
chr1	18989175	18989176	chunk0002_175_1	191.7803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	18989115	18989272	-229967150	+	MER45A	DNA	hAT-Tip100	1	164	-14	3
chr1	19010733	19010734	chunk0002_178_1	10.1791	AR_DHT_Control	chr1	19010649	19010983	-229945439	+	LTR88a	LTR	Gypsy?	480	806	-10	3
chr1	19066482	19066483	chunk0002_179_1	107.07695	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	19066475	19066563	-229889859	+	MER53	DNA	hAT	2	86	-107	3
chr1	19097559	19097560	chunk0002_184_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	19097545	19097630	-229858792	-	MIR	SINE	MIR	0	268	188	3
chr1	19420836	19420837	chunk0002_187_1	42.33275	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	19420830	19420858	-229535564	+	(ATAA)n	Simple_repeat	Simple_repeat	1	29	0	3
chr1	19427359	19427360	chunk0002_191_1	118.4056	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	19427177	19427466	-229528956	-	MamRep434	DNA	TcMar-Tigger	-105	321	6	3
chr1	19452330	19452331	chunk0002_197_1	28.1642	AR_DHT_Control	chr1	19452330	19452441	-229503981	+	L2b	LINE	L2	3247	3359	-16	3
chr1	19548001	19548002	chunk0002_205_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	19547919	19548148	-229408274	+	L4_A_Mam	LINE	RTE-X	4665	4902	-88	3
chr1	19613528	19613529	chunk0002_208_1	107.47767	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	19613492	19613681	-229342741	+	L2b	LINE	L2	3147	3352	-23	3
chr1	19640182	19640183	chunk0002_215_1	30.9031	AR_DHT_Control	chr1	19640131	19640291	-229316131	+	L2a	LINE	L2	3269	3426	0	3
chr1	19674276	19674277	chunk0002_217_1	15.3744	AR_DHT_Control	chr1	19674167	19674399	-229282023	-	L1ME3G	LINE	L1	-174	750	512	3
chr1	19776473	19776474	chunk0002_219_1	27.8398	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	19776430	19776479	-229179943	+	L2b	LINE	L2	3313	3363	-12	3
chr1	19987857	19987858	chunk0002_225_1	17.33585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	19987484	19988110	-228968312	-	L1MC4a	LINE	L1	-1861	6021	5464	3
chr1	20032717	20032718	chunk0002_228_1	258.3118	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	20031175	20034775	-228921647	-	LTR46-int	LTR	ERV1	-1052	5933	2366	3
chr1	20321735	20321736	chunk0002_233_1	19.48105	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	20321608	20322262	-228634160	-	L2c	LINE	L2	-138	3249	2501	3
chr1	20341813	20341814	chunk0002_235_1	60.029	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	20341736	20342098	-228614324	+	L1M5	LINE	L1	4766	5145	-1001	3
chr1	20357021	20357022	chunk0002_238_1	27.7171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	20356810	20357108	-228599314	-	MamRep434	DNA	TcMar-Tigger	-57	369	50	3
chr1	20538900	20538901	chunk0002_240_1	5.95444	AR_DHT_Control	chr1	20538734	20538943	-228417479	+	MIRb	SINE	MIR	58	267	-1	3
chr1	20680314	20680315	chunk0002_243_1	42.4477	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	20680286	20680430	-228275992	+	L1MC4	LINE	L1	727	875	-5340	3
chr1	20834910	20834911	chunk0002_245_1	6.48643	AR_DHT_Control	chr1	20834463	20835657	-228120765	+	L1M1	LINE	L1	3636	4854	-2708	3
chr1	21310190	21310191	chunk0002_257_1	17.1871	AR_DHT_Control	chr1	21310162	21310574	-227645848	-	MLT1K	LTR	ERVL-MaLR	-116	479	40	3
chr1	21332382	21332383	chunk0002_260_1	142.8619	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	21332335	21332583	-227623839	-	MIR	SINE	MIR	0	262	7	3
chr1	21574299	21574300	chunk0002_265_1	9.21264	AR_DHT_Control	chr1	21574193	21574391	-227382031	+	MIRb	SINE	MIR	31	268	0	3
chr1	21625744	21625745	chunk0002_267_1	17.4385	AR_DHT_Control	chr1	21625717	21625861	-227330561	+	L2b	LINE	L2	3224	3373	-2	3
chr1	22052417	22052418	chunk0002_276_1	9.21264	AR_DHT_Control	chr1	22052128	22052433	-226903989	+	AluSx1	SINE	Alu	1	304	-8	3
chr1	22412724	22412725	chunk0002_280_1	7.36432	AR_DHT_Control	chr1	22412582	22412731	-226543691	-	MIR1_Amn	SINE	MIR	-80	150	3	4
chr1	22486148	22486149	chunk0002_283_1	27.6857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	22485523	22486713	-226469709	-	L1MC1	LINE	L1	-5065	1443	208	4
chr1	22717532	22717533	chunk0002_285_1	4.83532	AR_DHT_Control	chr1	22717514	22717669	-226238753	+	MIRb	SINE	MIR	80	237	-31	4
chr1	22813127	22813128	chunk0002_286_1	5.55081	AR_DHT_Control	chr1	22813100	22813290	-226143132	-	MIRc	SINE	MIR	-7	261	38	4
chr1	22826830	22826831	chunk0002_287_1	61.79637	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	22826806	22826923	-226129499	+	L2b	LINE	L2	3230	3356	-19	4
chr1	22853701	22853702	chunk0002_289_1	44.371	AR_DHT_Control	chr1	22853346	22853856	-226102566	-	L2c	LINE	L2	-15	3372	2826	4
chr1	22967825	22967826	chunk0002_291_1	45.8105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	22967741	22967916	-225988506	+	L2a	LINE	L2	3225	3424	-2	4
chr1	23727623	23727624	chunk0002_303_1	27.333	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	23727380	23727672	-225228750	-	MER102b	DNA	hAT-Charlie	-28	303	1	4
chr1	23830401	23830402	chunk0002_308_1	37.6171	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	23830217	23830441	-225125981	+	L1MB4	LINE	L1	5696	5923	-257	4
chr1	23997953	23997954	chunk0002_313_1	11.1716	AR_DHT_Control	chr1	23997824	23998467	-224957955	+	L1MB5	LINE	L1	5520	6174	0	4
chr1	24043651	24043652	chunk0002_315_1	30.0159	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	24043208	24043690	-224912732	+	L2a	LINE	L2	2710	3256	-170	4
chr1	24129405	24129406	chunk0002_316_1	175.1424	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	24129098	24129632	-224826790	+	L2	LINE	L2	2090	2653	-766	4
chr1	24384932	24384933	chunk0002_327_1	216.1868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	24384911	24385080	-224571342	-	MIRb	SINE	MIR	-47	221	22	4
chr1	24399209	24399210	chunk0002_331_1	32.81222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	24399101	24400544	-224555878	+	L1ME3A	LINE	L1	4824	6346	0	4
chr1	25032536	25032537	chunk0002_342_1	46.17046	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	25032385	25033152	-223923270	-	Tigger13a	DNA	TcMar-Tigger	-1	770	4	4
chr1	25141983	25141984	chunk0002_344_1	7.80475	AR_DHT_Control	chr1	25141929	25142102	-223814320	-	MIR3	SINE	MIR	-27	181	10	4
chr1	25252971	25252972	chunk0002_345_1	42.42312	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	25252834	25253092	-223703330	-	LTR66	LTR	ERVL	-339	271	1	4
chr1	25588035	25588036	chunk0002_351_1	58.47774	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	25587849	25588817	-223367605	+	LTR5_Hs	LTR	ERVK	1	968	0	4
chr1	25682037	25682038	chunk0002_353_1	26.61105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	25681840	25682396	-223274026	+	L3	LINE	CR1	2787	3350	-749	4
chr1	25872427	25872428	chunk0002_355_1	10.1791	AR_DHT_Control	chr1	25872366	25872473	-223083949	-	L2c	LINE	L2	-7	3380	3277	4
chr1	25889959	25889960	chunk0002_356_1	39.9021	AR_DHT_Control	chr1	25889423	25890137	-223066285	+	L2a	LINE	L2	2463	3422	-4	4
chr1	25932574	25932575	chunk0002_358_1	44.87602	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	25932494	25932625	-223023797	+	L2c	LINE	L2	3243	3366	-21	4
chr1	26005006	26005007	chunk0002_360_1	16.4778	AR_DHT_Control	chr1	26004826	26005021	-222951401	+	L2c	LINE	L2	2879	3065	-354	4
chr1	26080440	26080441	chunk0002_363_1	127.6	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	26079743	26080549	-222875873	+	L1ME3A	LINE	L1	5315	6124	-40	4
chr1	26235174	26235175	chunk0002_369_1	12.1095	AR_DHT_Control	chr1	26235153	26235233	-222721189	+	L2b	LINE	L2	3291	3371	-4	4
chr1	26404782	26404783	chunk0002_372_1	41.996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	26404774	26404950	-222551472	+	L2a	LINE	L2	3260	3426	0	4
chr1	26553143	26553144	chunk0002_376_1	13.2288	AR_DHT_Control	chr1	26552820	26553236	-222403186	-	L1MC5a	LINE	L1	-1905	872	416	4
chr1	26939738	26939739	chunk0002_391_1	6.13982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	26939698	26939858	-222016564	-	MER5A	DNA	hAT-Charlie	-18	171	10	5
chr1	27115838	27115839	chunk0002_394_1	8.49128	AR_DHT_Control	chr1	27115774	27115878	-221840544	+	L2c	LINE	L2	3272	3377	-10	5
chr1	27121398	27121399	chunk0002_395_1	19.1399	AR_DHT_Control	chr1	27121314	27121467	-221834955	+	MIR3	SINE	MIR	7	159	-49	5
chr1	27234624	27234625	chunk0002_397_1	12.6114	Merged_Lncap_AR_Veh	chr1	27234575	27234625	-221721797	+	(CGCAGG)n	Simple_repeat	Simple_repeat	1	50	0	5
chr1	27272746	27272747	chunk0002_398_1	6.48643	AR_DHT_Control	chr1	27272693	27272922	-221683500	+	AluJr	SINE	Alu	64	300	-12	5
chr1	27278240	27278241	chunk0002_399_1	98.417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	27278154	27278346	-221678076	+	MER58A	DNA	hAT-Charlie	42	280	-2140	5
chr1	27327947	27327948	chunk0002_400_1	8.22827	AR_DHT_Control	chr1	27327941	27328475	-221627947	-	L2a	LINE	L2	-2	3424	2790	5
chr1	27444650	27444651	chunk0002_407_1	11.1716	AR_DHT_Control	chr1	27444586	27444754	-221511668	+	LFSINE_Vert	SINE	tRNA	212	410	-49	5
chr1	27542584	27542585	chunk0002_412_1	20.40008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	27542522	27542734	-221413688	-	MIRb	SINE	MIR	-4	258	8	5
chr1	27608869	27608870	chunk0002_416_1	6.45888	AR_DHT_Control	chr1	27608841	27608883	-221347539	+	(GT)n	Simple_repeat	Simple_repeat	1	42	0	5
chr1	27756083	27756084	chunk0002_418_1	25.7763	AR_DHT_Control	chr1	27755874	27756285	-221200137	-	MamRep605	LTR?	LTR?	-207	642	183	5
chr1	27858315	27858316	chunk0002_423_1	19.45044	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	27858304	27858469	-221097953	-	MIRb	SINE	MIR	-48	220	50	5
chr1	28072572	28072573	chunk0002_431_1	26.75696	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	28072491	28073103	-220883319	+	L1ME1	LINE	L1	5441	6051	-128	5
chr1	28091205	28091206	chunk0002_434_1	146.4861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	28090743	28091319	-220865103	+	L2a	LINE	L2	2774	3421	-5	5
chr1	28172910	28172911	chunk0002_439_1	85.70879	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	28172721	28172944	-220783478	+	MIRc	SINE	MIR	15	241	-27	5
chr1	28248407	28248408	chunk0002_442_1	7.38582	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	28248317	28248471	-220707951	+	MIR3	SINE	MIR	46	201	-7	5
chr1	28512537	28512538	chunk0003_1_1	18.02402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	28512480	28512806	-220443616	-	L1MEc	LINE	L1	-2974	3345	2996	5
chr1	28733926	28733927	chunk0003_10_1	14.4295	AR_DHT_Control	chr1	28733865	28734148	-220222274	+	L2b	LINE	L2	3049	3381	-6	5
chr1	28780504	28780505	chunk0003_14_1	29.27985	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	28780281	28780576	-220175846	+	L2-3_Crp	LINE	L2	718	1047	-1049	5
chr1	28896685	28896686	chunk0003_15_1	15.1785	AR_DHT_Control	chr1	28896564	28896740	-220059682	-	L2b	LINE	L2	-278	3109	2924	5
chr1	28901982	28901983	chunk0003_16_1	11.6878	AR_DHT_Control	chr1	28901833	28902076	-220054346	+	L2a	LINE	L2	3159	3412	-14	5
chr1	28950164	28950165	chunk0003_17_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	28949901	28950218	-220006204	-	L1ME3F	LINE	L1	-377	5866	5587	5
chr1	28956402	28956403	chunk0003_18_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	28956340	28956435	-219999987	-	Penelope1_Vert	LINE	Penelope	-13	1074	977	5
chr1	29136581	29136582	chunk0003_21_1	8.66151	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	29136548	29136674	-219819748	-	L1ME4c	LINE	L1	-320	510	380	5
chr1	29271737	29271738	chunk0003_23_1	4.88663	AR_DHT_Control	chr1	29271536	29271786	-219684636	+	MER102b	DNA	hAT-Charlie	49	299	-42	5
chr1	29355269	29355270	chunk0003_25_1	39.31395	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	29354942	29355325	-219601097	+	L2c	LINE	L2	2975	3387	0	5
chr1	29453483	29453484	chunk0003_26_1	5.56779	AR_DHT_Control	chr1	29453162	29453566	-219502856	-	L2b	LINE	L2	-4	3371	3000	5
chr1	29706485	29706486	chunk0003_31_1	86.8833	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	29706326	29706617	-219249805	-	MER41C	LTR	ERV1	0	521	246	5
chr1	30110829	30110830	chunk0003_34_1	30.8703	AR_DHT_Control	chr1	30110352	30111306	-218845116	-	L1ME1	LINE	L1	-1	6178	5199	5
chr1	30216722	30216723	chunk0003_35_1	7.74912	AR_DHT_Control	chr1	30216439	30217081	-218739341	+	(AC)n	Simple_repeat	Simple_repeat	1	644	0	5
chr1	30250759	30250760	chunk0003_36_1	9.35087	AR_DHT_Control	chr1	30250722	30250849	-218705573	-	MIRb	SINE	MIR	-89	179	65	5
chr1	30502446	30502447	chunk0003_38_1	21.0778	AR_DHT_Control	chr1	30502359	30502629	-218453793	+	MLT1C	LTR	ERVL-MaLR	176	463	-4	5
chr1	30675766	30675767	chunk0003_42_1	16.47803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	30675628	30676789	-218279633	+	L1ME4b	LINE	L1	3161	4460	-1686	5
chr1	30715483	30715484	chunk0003_43_1	4.04066	AR_DHT_Control	chr1	30715456	30715637	-218240785	-	MIRb	SINE	MIR	0	268	101	5
chr1	30788736	30788737	chunk0003_49_1	148.02365	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	30788707	30788919	-218167503	-	L2c	LINE	L2	-258	3129	2910	5
chr1	30905978	30905979	chunk0003_55_1	10.1803	AR_DHT_Control	chr1	30905960	30905989	-218050433	+	(AC)n	Simple_repeat	Simple_repeat	1	29	0	5
chr1	30923371	30923372	chunk0003_56_1	68.0306	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	30923234	30923716	-218032706	-	MER34B-int	LTR	ERV1	-2485	2871	2391	5
chr1	31187762	31187763	chunk0003_63_1	14.9518	AR_DHT_Control	chr1	31187579	31187812	-217768610	+	MIRb	SINE	MIR	5	256	-12	6
chr1	31235748	31235749	chunk0003_65_1	4.19326	AR_DHT_Control	chr1	31235701	31235871	-217720551	-	MIR1_Amn	SINE	MIR	-25	183	19	6
chr1	31277325	31277326	chunk0003_69_1	89.9394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	31277216	31277395	-217679027	+	L1ME4a	LINE	L1	5930	6109	-15	6
chr1	31295034	31295035	chunk0003_71_1	40.3953	AR_DHT_Control	chr1	31294959	31295111	-217661311	-	L2a	LINE	L2	-44	3382	3218	6
chr1	31308231	31308232	chunk0003_72_1	19.00003	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	31308216	31308320	-217648102	-	MLT1O	LTR	ERVL-MaLR	-16	526	422	6
chr1	31341009	31341010	chunk0003_74_1	9.21264	AR_DHT_Control	chr1	31340920	31341148	-217615274	-	MIRb	SINE	MIR	-17	251	2	6
chr1	31390311	31390312	chunk0003_75_1	5.77762	AR_DHT_Control	chr1	31390260	31390763	-217565659	+	MLT1O	LTR	ERVL-MaLR	27	542	0	6
chr1	31405183	31405184	chunk0003_76_1	14.3513	AR_DHT_Control	chr1	31405118	31405347	-217551075	-	L1MB3	LINE	L1	-173	6010	5781	6
chr1	31422584	31422585	chunk0003_78_1	12.2543	AR_DHT_Control	chr1	31422464	31422655	-217533767	+	L2c	LINE	L2	3119	3317	-70	6
chr1	31471829	31471830	chunk0003_79_1	4.9245	AR_DHT_Control	chr1	31471367	31471933	-217484489	-	LTR10A	LTR	ERV1	-64	545	1	6
chr1	31475487	31475488	chunk0003_80_1	5.85263	AR_DHT_Control	chr1	31474977	31478331	-217478091	-	L1PBa	LINE	L1	-3156	3706	255	6
chr1	31605427	31605428	chunk0003_82_1	11.5514	AR_DHT_Control	chr1	31605317	31605814	-217350608	-	Tigger3	DNA	TcMar-Tigger	-9	3020	2498	6
chr1	31657375	31657376	chunk0003_84_1	15.84069	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	31657293	31657401	-217299021	+	L2b	LINE	L2	3262	3370	-5	6
chr1	31704791	31704792	chunk0003_87_1	58.96938	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	31704671	31704875	-217251547	+	MIR	SINE	MIR	50	262	0	6
chr1	31768229	31768230	chunk0003_88_1	7.59394	AR_DHT_Control	chr1	31768146	31768870	-217187552	+	L2a	LINE	L2	2598	3426	0	6
chr1	31843027	31843028	chunk0003_91_1	97.6262	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	31843001	31843066	-217113356	-	L2a	LINE	L2	0	3375	3305	6
chr1	31962833	31962834	chunk0003_103_1	41.2866	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	31962658	31962845	-216993577	+	L1MC4a	LINE	L1	5628	5826	-2056	6
chr1	32369174	32369175	chunk0003_115_1	22.3353	AR_DHT_Control	chr1	32368998	32369252	-216587170	+	L1ME4a	LINE	L1	5635	5900	-224	6
chr1	32406732	32406733	chunk0003_117_1	81.3557	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	32406197	32407035	-216549387	-	ERVL-E-int	LTR	ERVL	-945	4722	3828	6
chr1	32475208	32475209	chunk0003_121_1	62.87281	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	32475180	32475299	-216481123	-	L2c	LINE	L2	0	3387	3258	6
chr1	32502079	32502080	chunk0003_125_1	482.541	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	32501981	32502280	-216454142	-	L1MC4	LINE	L1	-1033	7009	6714	6
chr1	32570612	32570613	chunk0003_126_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	32569920	32570876	-216385546	-	L1ME2	LINE	L1	-1036	5608	4662	6
chr1	32574764	32574765	chunk0003_127_1	7.36432	AR_DHT_Control	chr1	32574615	32574772	-216381650	-	L1ME2	LINE	L1	-3389	3255	3107	6
chr1	32677075	32677076	chunk0003_129_1	8.13469	AR_DHT_Control	chr1	32677035	32677147	-216279275	+	MER21C	LTR	ERVL	7	211	-727	6
chr1	32763500	32763501	chunk0003_136_1	80.25892	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	32763311	32763558	-216192864	+	L2a	LINE	L2	2879	3142	-284	6
chr1	32767375	32767376	chunk0003_137_1	42.472	AR_DHT_Control	chr1	32767367	32767427	-216188995	+	(TG)n	Simple_repeat	Simple_repeat	1	62	0	6
chr1	32981675	32981676	chunk0003_142_1	19.0111	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	32981626	32981743	-215974679	-	MIR	SINE	MIR	0	262	152	6
chr1	33048540	33048541	chunk0003_150_1	13.2288	AR_DHT_Control	chr1	33048531	33048845	-215907577	+	MLT1I	LTR	ERVL-MaLR	1	329	-82	6
chr1	33055697	33055698	chunk0003_152_1	24.9681	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	33055693	33055834	-215900588	-	LTR78B	LTR	ERV1	-823	473	322	6
chr1	33240610	33240611	chunk0003_157_1	63.8596	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	33240256	33240833	-215715589	+	MER97c	DNA	hAT-Tip100	2	585	-544	6
chr1	33377135	33377136	chunk0003_162_1	14.61107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	33377072	33377287	-215579135	+	MIRb	SINE	MIR	26	262	-6	6
chr1	33482597	33482598	chunk0003_170_1	147.25057	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	33481866	33483555	-215472867	-	L1MC1	LINE	L1	0	6508	4824	6
chr1	33563836	33563837	chunk0003_173_1	21.84374	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	33563720	33563886	-215392536	-	L2b	LINE	L2	-1929	1490	1323	6
chr1	33640461	33640462	chunk0003_176_1	18.32624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	33640415	33640618	-215315804	+	MER58A	DNA	hAT-Charlie	1	224	0	6
chr1	33688119	33688120	chunk0003_183_1	5.89231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	33687910	33688314	-215268108	+	L1ME3G	LINE	L1	495	636	-288	6
chr1	33758877	33758878	chunk0003_188_1	81.09473	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	33758710	33759061	-215197361	+	MLT1I	LTR	ERVL-MaLR	72	448	0	6
chr1	34052683	34052684	chunk0003_192_1	43.82874	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	34052622	34052794	-214903628	+	L2a	LINE	L2	3264	3426	0	6
chr1	34113697	34113698	chunk0003_193_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	34113632	34114040	-214842382	+	L1MB2	LINE	L1	675	1068	-5497	6
chr1	34799213	34799214	chunk0003_199_1	13.1652	AR_DHT_Control	chr1	34799202	34799374	-214157048	-	L3	LINE	CR1	-252	3847	3635	6
chr1	34851145	34851146	chunk0003_203_1	5.43586	AR_DHT_Control	chr1	34851132	34851195	-214105227	+	MIRb	SINE	MIR	158	232	-36	6
chr1	35307063	35307064	chunk0003_211_1	28.42731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	35307050	35307188	-213649234	+	MIR3	SINE	MIR	69	193	-15	6
chr1	35326468	35326469	chunk0003_214_1	174.7511	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	35326078	35326857	-213629565	-	MER6	DNA	TcMar-Tigger	-1	864	70	6
chr1	35514351	35514352	chunk0003_223_1	9.13774	AR_DHT_Control	chr1	35514342	35515030	-213441392	+	L1PA14	LINE	L1	2286	2961	-3370	6
chr1	35688214	35688215	chunk0003_230_1	30.73825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	35687916	35688216	-213268206	+	AluSz	SINE	Alu	1	299	-13	6
chr1	35719262	35719263	chunk0003_232_1	11.1005	AR_DHT_Control	chr1	35719185	35719446	-213236976	+	L2a	LINE	L2	2949	3266	-160	6
chr1	35929857	35929858	chunk0003_238_1	16.97882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	35929828	35929951	-213026471	-	MIRb	SINE	MIR	-54	214	84	6
chr1	36200176	36200177	chunk0003_248_1	311.7694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	36199920	36200407	-212756015	+	L2b	LINE	L2	2766	3348	-27	7
chr1	36232552	36232553	chunk0003_255_1	113.42356	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	36232397	36232631	-212723791	+	L2a	LINE	L2	3129	3410	-16	7
chr1	36328852	36328853	chunk0003_269_1	20.0247	AR_DHT_Control	chr1	36328805	36329025	-212627397	-	MIRb	SINE	MIR	0	268	18	7
chr1	36641934	36641935	chunk0003_275_1	5.08049	AR_DHT_Control	chr1	36641899	36641990	-212314432	+	L2b	LINE	L2	3276	3371	-4	7
chr1	37070758	37070759	chunk0003_279_1	6.29634	AR_DHT_Control	chr1	37070743	37070764	-211885658	+	(GT)n	Simple_repeat	Simple_repeat	1	21	0	7
chr1	37461904	37461905	chunk0003_284_1	30.06492	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	37461529	37461960	-211494462	+	MLT1C	LTR	ERVL-MaLR	1	465	-2	7
chr1	37464314	37464315	chunk0003_286_1	4.73293	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	37464145	37464588	-211491834	+	Charlie21a	DNA	hAT-Charlie	780	1211	-2	7
chr1	38194897	38194898	chunk0003_318_1	119.4461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	38194761	38195260	-210761162	-	LTR106_Mam	LTR	LTR	-151	557	63	7
chr1	38272533	38272534	chunk0003_321_1	4.19197	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	38272370	38272537	-210683885	-	LTR16A2	LTR	ERVL	-69	426	262	7
chr1	38314821	38314822	chunk0003_324_1	13.7636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	38313952	38315008	-210641414	-	L1MC3	LINE	L1	-1639	6564	5535	7
chr1	38413393	38413394	chunk0003_325_1	34.6752	AR_DHT_Control	chr1	38413166	38413594	-210542828	-	MLT1C	LTR	ERVL-MaLR	-2	465	3	7
chr1	38441141	38441142	chunk0003_326_1	11.0973	AR_DHT_Control	chr1	38439792	38441345	-210515077	-	L1MEc	LINE	L1	-4688	1712	38	7
chr1	38725395	38725396	chunk0003_330_1	20.19736	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	38725271	38725865	-210230557	+	LTR10C	LTR	ERV1	1	591	0	7
chr1	38951222	38951223	chunk0003_336_1	9.78588	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	38951074	38951285	-210005137	-	MER103C	DNA	hAT-Charlie	-12	285	81	7
chr1	38986759	38986760	chunk0003_337_1	5.6425	AR_DHT_Control	chr1	38986188	38986774	-209969648	+	L2c	LINE	L2	2709	3362	-13	7
chr1	39076592	39076593	chunk0003_348_1	40.15539	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	39076505	39076641	-209879781	+	L2c	LINE	L2	3260	3382	-5	7
chr1	39098507	39098508	chunk0003_349_1	7.29426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	39098447	39098511	-209857911	-	MIRc	SINE	MIR	-5	263	200	7
chr1	39171229	39171230	chunk0003_357_1	13.62502	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	39171203	39171240	-209785182	+	(TG)n	Simple_repeat	Simple_repeat	1	37	0	7
chr1	39366639	39366640	chunk0003_361_1	20.63115	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	39366496	39366696	-209589726	-	L1MC5a	LINE	L1	-1682	4464	4229	7
chr1	39544545	39544546	chunk0003_371_1	235.0318	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	39544440	39545087	-209411335	+	L1MC4	LINE	L1	7327	7989	-53	7
chr1	39701271	39701272	chunk0003_379_1	21.50161	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	39700984	39701400	-209255022	-	LTR46	LTR	ERV1	0	460	1	7
chr1	39751056	39751057	chunk0003_380_1	28.6666	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	39750788	39751348	-209205074	-	MER20B	DNA	hAT-Charlie	-3	780	195	7
chr1	39893407	39893408	chunk0003_395_1	10.3813	AR_DHT_Control	chr1	39893378	39893566	-209062856	+	MIRb	SINE	MIR	9	229	-39	7
chr1	39944800	39944801	chunk0003_398_1	17.8225	AR_DHT_Control	chr1	39944347	39944861	-209011561	-	MER21-int	LTR	ERVL	-525	3666	3072	7
chr1	40024916	40024917	chunk0003_400_1	11.2507	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	40024460	40024927	-208931495	-	L1M5	LINE	L1	-3039	3107	2626	7
chr1	40030845	40030846	chunk0003_401_1	50.4628	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	40030249	40030959	-208925463	+	L2b	LINE	L2	2647	3361	-14	7
chr1	40046668	40046669	chunk0003_405_1	99.8811	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	40046557	40046773	-208909649	-	Tigger3a	DNA	TcMar-Tigger	0	348	115	7
chr1	40176277	40176278	chunk0003_408_1	10.5201	AR_DHT_Control	chr1	40175802	40176458	-208779964	-	L1ME1	LINE	L1	-62	6117	5408	7
chr1	40282065	40282066	chunk0003_411_1	33.263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	40282024	40282274	-208674148	-	L2c	LINE	L2	-1	3386	3141	7
chr1	40339064	40339065	chunk0003_414_1	6.48643	AR_DHT_Control	chr1	40339015	40339174	-208617248	+	MIRb	SINE	MIR	3	164	-104	7
chr1	40868499	40868500	chunk0003_424_1	44.96301	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	40868259	40868538	-208087884	+	Tigger3b	DNA	TcMar-Tigger	964	1229	-2	7
chr1	40911522	40911523	chunk0003_425_1	8.27376	AR_DHT_Control	chr1	40911155	40911665	-208044757	+	MER41C	LTR	ERV1	1	521	0	7
chr1	41003914	41003915	chunk0003_427_1	11.7067	AR_DHT_Control	chr1	41003736	41004160	-207952262	-	MLT1H2	LTR	ERVL-MaLR	-6	483	1	8
chr1	41129278	41129279	chunk0003_433_1	8.27376	AR_DHT_Control	chr1	41129186	41129785	-207826637	-	L1MB3	LINE	L1	-1	6182	5606	8
chr1	41175219	41175220	chunk0003_436_1	7.3092	AR_DHT_Control	chr1	41175038	41175563	-207780859	+	MLT2B1	LTR	ERVL	1	512	-8	8
chr1	41208807	41208808	chunk0003_437_1	11.1716	AR_DHT_Control	chr1	41208441	41210813	-207745609	+	L1PA6	LINE	L1	2702	5094	-1052	8
chr1	41215883	41215884	chunk0003_438_1	41.0586	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	41215210	41215887	-207740535	+	L2c	LINE	L2	2714	3383	-4	8
chr1	41360296	41360297	chunk0003_446_1	5.21623	AR_DHT_Control	chr1	41360167	41360300	-207596122	-	L2b	LINE	L2	-215	3160	3035	8
chr1	41369507	41369508	chunk0003_447_1	14.041	AR_DHT_Control	chr1	41369426	41369528	-207586894	+	MER5B	DNA	hAT-Charlie	2	102	-76	8
chr1	41432467	41432468	chunk0003_448_1	15.4138	AR_DHT_Control	chr1	41432330	41432520	-207523902	+	MLT1B	LTR	ERVL-MaLR	1	194	-171	8
chr1	41462451	41462452	chunk0003_450_1	7.84489	AR_DHT_Control	chr1	41462400	41462859	-207493563	-	MLT1K	LTR	ERVL-MaLR	0	595	110	8
chr1	41474520	41474521	chunk0003_451_1	19.28291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	41474305	41474574	-207481848	+	MIR	SINE	MIR	2	260	-2	8
chr1	41689117	41689118	chunk0003_458_1	9.30377	AR_DHT_Control	chr1	41688727	41689188	-207267234	+	L2c	LINE	L2	2916	3384	-3	8
chr1	41773283	41773284	chunk0003_459_1	7.62365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	41773099	41773336	-207183086	-	MIRb	SINE	MIR	-15	253	3	8
chr1	41790445	41790446	chunk0003_462_1	36.39079	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	41790104	41790492	-207165930	+	MSTB1	LTR	ERVL-MaLR	1	432	0	8
chr1	41823479	41823480	chunk0003_463_1	11.4584	AR_DHT_Control	chr1	41823320	41823496	-207132926	-	MIRb	SINE	MIR	-64	204	21	8
chr1	41875757	41875758	chunk0004_4_1	11.2514	AR_DHT_Control	chr1	41875310	41875970	-207080452	+	L2b	LINE	L2	2638	3303	-72	8
chr1	42081693	42081694	chunk0004_12_1	16.49768	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	42080974	42082626	-206873796	-	L1MA4A	LINE	L1	-5498	1351	5	8
chr1	42198469	42198470	chunk0004_20_1	42.7962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	42198378	42198503	-206757919	-	L1M6	LINE	L1	-5597	899	777	8
chr1	42259354	42259355	chunk0004_21_1	5.25527	AR_DHT_Control	chr1	42259007	42259373	-206697049	+	L1ME1	LINE	L1	5745	6148	-31	8
chr1	42606165	42606166	chunk0004_34_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	42605878	42606276	-206350146	+	Tigger2	DNA	TcMar-Tigger	1	432	-2286	8
chr1	42844870	42844871	chunk0004_41_1	6.10159	AR_DHT_Control	chr1	42844426	42844922	-206111500	-	MLT2B4	LTR	ERVL	0	556	1	8
chr1	42931845	42931846	chunk0004_42_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	42931543	42931852	-206024570	+	AluSz	SINE	Alu	1	307	-5	8
chr1	42937986	42937987	chunk0004_44_1	7.44058	AR_DHT_Control	chr1	42937860	42938031	-206018391	+	MIR3	SINE	MIR	24	201	-7	8
chr1	42946635	42946636	chunk0004_49_1	25.75321	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	42946407	42946753	-206009669	-	L2b	LINE	L2	-89	3298	2953	8
chr1	43125221	43125222	chunk0004_57_1	10.179	AR_DHT_Control	chr1	43125115	43125422	-205831000	-	L1MEd	LINE	L1	-1890	4256	3903	8
chr1	43153164	43153165	chunk0004_58_1	16.5928	AR_DHT_Control	chr1	43152983	43153199	-205803223	+	MIR	SINE	MIR	13	245	-23	8
chr1	43265507	43265508	chunk0004_63_1	84.2366	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43265023	43266050	-205690372	-	LOR1-int	LTR	ERV1	-6822	1298	206	8
chr1	43395937	43395938	chunk0004_70_1	30.974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43395854	43396088	-205560334	+	L3	LINE	CR1	3179	3440	-659	8
chr1	43492812	43492813	chunk0004_71_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43492693	43493121	-205463301	-	LTR3B	LTR	ERVK	-4	433	1	8
chr1	43537755	43537756	chunk0004_72_1	12.7964	AR_DHT_Control	chr1	43537442	43537857	-205418565	-	L2b	LINE	L2	0	3375	2946	8
chr1	43550350	43550351	chunk0004_75_1	6.05516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43550347	43550386	-205406036	+	(GCCCC)n	Simple_repeat	Simple_repeat	1	39	0	8
chr1	43643233	43643234	chunk0004_79_1	25.55204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	43642690	43643699	-205312723	+	L1MB7	LINE	L1	5102	6131	-53	8
chr1	43671398	43671399	chunk0004_80_1	103.0753	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43671214	43671446	-205284976	-	MIRb	SINE	MIR	-3	265	3	8
chr1	43716291	43716292	chunk0004_83_1	18.5967	AR_DHT_Control	chr1	43716014	43716464	-205239958	-	Charlie7	DNA	hAT-Charlie	-694	1918	1465	8
chr1	43732214	43732215	chunk0004_84_1	6.58746	AR_DHT_Control	chr1	43732163	43732654	-205223768	+	LTR33	LTR	ERVL	10	512	-3	8
chr1	43757918	43757919	chunk0004_88_1	134.8356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	43757204	43758153	-205198269	+	L1MB7	LINE	L1	4569	5468	-775	8
chr1	43793370	43793371	chunk0004_92_1	13.3182	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43793230	43793468	-205162954	-	L1MA3	LINE	L1	0	6305	6068	8
chr1	43831046	43831047	chunk0004_93_1	9.35087	AR_DHT_Control	chr1	43830975	43831186	-205125236	-	MIRc	SINE	MIR	-14	254	19	8
chr1	43842013	43842014	chunk0004_96_1	10.4905	AR_DHT_Control	chr1	43840806	43842332	-205114090	-	MSTA-int	LTR	ERVL-MaLR	-107	1544	2	8
chr1	43847902	43847903	chunk0004_97_1	18.32205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	43847809	43848289	-205108133	-	L1MEc	LINE	L1	-4481	1919	1413	8
chr1	43872628	43872629	chunk0004_99_1	9.98154	AR_DHT_Control	chr1	43872619	43873502	-205082920	-	L2a	LINE	L2	-3	3423	2390	8
chr1	43913343	43913344	chunk0004_100_1	9.34168	AR_DHT_Control	chr1	43913262	43913481	-205042941	-	MIRb	SINE	MIR	-1	267	36	8
chr1	44004749	44004750	chunk0004_102_1	10.1061	AR_DHT_Control	chr1	44004645	44004751	-204951671	+	Tigger16a	DNA	TcMar-Tigger	764	874	-83	8
chr1	44196706	44196707	chunk0004_104_1	7.36432	AR_DHT_Control	chr1	44196603	44197004	-204759418	-	L1MC4	LINE	L1	-3760	2455	2014	8
chr1	44481352	44481353	chunk0004_113_1	4.36845	AR_DHT_Control	chr1	44481140	44481403	-204475019	+	AluJo	SINE	Alu	1	260	-52	8
chr1	44537768	44537769	chunk0004_115_1	21.7559	AR_DHT_Control	chr1	44537525	44538288	-204418134	-	L3	LINE	CR1	-199	3900	3002	8
chr1	44606867	44606868	chunk0004_116_1	6.65967	AR_DHT_Control	chr1	44606500	44607482	-204348940	+	L2b	LINE	L2	2037	3046	-373	8
chr1	44668967	44668968	chunk0004_125_1	7.62365	AR_DHT_Control	chr1	44668885	44669119	-204287303	+	MIR	SINE	MIR	2	262	0	8
chr1	44708752	44708753	chunk0004_129_1	6.3126	AR_DHT_Control	chr1	44708742	44708969	-204247453	+	L2	LINE	L2	1546	1808	-1611	8
chr1	44730811	44730812	chunk0004_130_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	44730708	44730899	-204225523	+	AluSx4	SINE	Alu	7	221	-89	8
chr1	44798967	44798968	chunk0004_136_1	12.26915	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	44798848	44799071	-204157351	+	L2a	LINE	L2	3152	3419	-7	8
chr1	44899233	44899234	chunk0004_139_1	22.421	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	44899157	44899338	-204057084	-	L1ME1	LINE	L1	-8	6171	5995	8
chr1	45141524	45141525	chunk0004_145_1	10.3842	AR_DHT_Control	chr1	45140736	45141623	-203814799	+	L1MD2	LINE	L1	38	1051	-5496	8
chr1	45314675	45314676	chunk0004_151_1	55.676	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	45314627	45314803	-203641619	-	MER4-int	LTR	ERV1	-4109	2489	2327	8
chr1	45336129	45336130	chunk0004_152_1	8.49128	AR_DHT_Control	chr1	45335832	45336202	-203620220	+	LTR29	LTR	ERV1	13	418	-204	8
chr1	45375438	45375439	chunk0004_155_1	6.86162	AR_DHT_Control	chr1	45374732	45375616	-203580806	+	L2a	LINE	L2	2406	3319	-107	8
chr1	45502314	45502315	chunk0004_160_1	6.84874	AR_DHT_Control	chr1	45502260	45502541	-203453881	-	AluJr	SINE	Alu	-3	309	1	8
chr1	45551241	45551242	chunk0004_162_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	45551236	45551450	-203404972	+	MIRb	SINE	MIR	13	256	-6	8
chr1	45670008	45670009	chunk0004_167_1	8.7059	AR_DHT_Control	chr1	45669935	45670015	-203286407	+	L2a	LINE	L2	3334	3426	0	8
chr1	45822811	45822812	chunk0004_170_1	10.4222	AR_DHT_Control	chr1	45822365	45822939	-203133483	-	LTR78B	LTR	ERV1	-252	1044	439	8
chr1	45827327	45827328	chunk0004_171_1	75.8204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	45827216	45827617	-203128805	-	HAL1ME	LINE	L1	-1394	1071	640	8
chr1	45972935	45972936	chunk0004_177_1	18.88416	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	45972549	45973447	-202982975	+	L2	LINE	L2	137	1058	-2361	8
chr1	45979215	45979216	chunk0004_179_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	45979046	45979229	-202977193	+	L1ME3B	LINE	L1	5950	6166	-76	8
chr1	46182056	46182057	chunk0004_188_1	6.29634	AR_DHT_Control	chr1	46181953	46182103	-202774319	-	L2b	LINE	L2	-723	2696	2538	8
chr1	46396638	46396639	chunk0004_194_1	63.0308	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	46395863	46396842	-202559580	-	LTR5B	LTR	ERVK	0	1002	1	8
chr1	46522747	46522748	chunk0004_198_1	6.9031	AR_DHT_Control	chr1	46522732	46522773	-202433649	+	(TG)n	Simple_repeat	Simple_repeat	1	41	0	9
chr1	46602513	46602514	chunk0004_200_1	10.1601	AR_DHT_Control	chr1	46602427	46602522	-202353900	-	L2b	LINE	L2	-378	2997	2912	9
chr1	46666561	46666562	chunk0004_205_1	9.94658	AR_DHT_Control	chr1	46666458	46666583	-202289839	-	L2b	LINE	L2	-40	3347	3215	9
chr1	46789386	46789387	chunk0004_216_1	21.6689	AR_DHT_Control	chr1	46788568	46789408	-202167014	+	LTR5_Hs	LTR	ERVK	1	863	-105	9
chr1	46846959	46846960	chunk0004_220_1	104.5498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	46846137	46850891	-202105531	+	L1PA5	LINE	L1	4	4710	-1436	9
chr1	46903683	46903684	chunk0004_223_1	12.72033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	46901767	46904716	-202051706	+	HERVK11-int	LTR	ERVK	5	2964	-4989	9
chr1	46908285	46908286	chunk0004_225_1	42.1211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	46908214	46908647	-202047775	-	L1MC1	LINE	L1	-8	6325	5881	9
chr1	47013383	47013384	chunk0004_228_1	12.1886	AR_DHT_Control	chr1	47013331	47013477	-201942945	+	MIRb	SINE	MIR	84	262	0	9
chr1	47249947	47249948	chunk0004_237_1	15.25095	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	47249876	47250107	-201706315	+	L1MD2	LINE	L1	6125	6303	-56	9
chr1	47267206	47267207	chunk0004_240_1	80.11088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	47266655	47267386	-201689036	+	L2a	LINE	L2	2626	3418	-8	9
chr1	47329217	47329218	chunk0004_243_1	4.77556	AR_DHT_Control	chr1	47329041	47329295	-201627127	+	MLT1G1	LTR	ERVL-MaLR	1	294	-285	9
chr1	47354765	47354766	chunk0004_245_1	29.74565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	47354550	47355000	-201601422	-	L1ME3G	LINE	L1	-240	684	200	9
chr1	47592173	47592174	chunk0004_250_1	4.56189	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	47591313	47592203	-201364219	+	(GT)n	Simple_repeat	Simple_repeat	1	915	0	9
chr1	47733875	47733876	chunk0004_253_1	119.98692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	47733548	47734193	-201222229	-	L1ME4b	LINE	L1	-222	670	3	9
chr1	47809861	47809862	chunk0004_256_1	6.58135	AR_DHT_Control	chr1	47809788	47809910	-201146512	+	MIR3	SINE	MIR	21	146	-84	9
chr1	48251321	48251322	chunk0004_265_1	75.0751	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	48251321	48251444	-200704978	+	LTR81AB	LTR	Gypsy	4	120	-158	9
chr1	48309831	48309832	chunk0004_270_1	31.36786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	48309681	48310503	-200645919	-	L1M4	LINE	L1	-6528	1092	143	9
chr1	48396335	48396336	chunk0004_272_1	26.16638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	48395819	48396950	-200559472	+	L1MB3	LINE	L1	5087	6183	0	9
chr1	48405585	48405586	chunk0004_274_1	102.1296	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	48405295	48405833	-200550589	-	MLT1F1	LTR	ERVL-MaLR	-4	565	3	9
chr1	48469966	48469967	chunk0004_282_1	14.5898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	48469908	48470040	-200486382	+	MIR3	SINE	MIR	67	199	-9	9
chr1	48552517	48552518	chunk0004_283_1	14.9872	AR_DHT_Control	chr1	48552517	48552710	-200403712	-	MER20	DNA	hAT-Charlie	-17	202	1	9
chr1	48836855	48836856	chunk0004_287_1	12.54713	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	48836829	48837301	-200119121	-	L2b	LINE	L2	0	3426	2970	9
chr1	48878687	48878688	chunk0004_291_1	42.43931	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	48878574	48878742	-200077680	+	L2b	LINE	L2	3194	3367	-8	9
chr1	48915504	48915505	chunk0004_292_1	7.00991	AR_DHT_Control	chr1	48915140	48915578	-200040844	+	L2c	LINE	L2	2927	3410	-16	9
chr1	48918267	48918268	chunk0004_294_1	25.17742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	48918266	48918314	-200038108	+	(TTGT)n	Simple_repeat	Simple_repeat	1	48	0	9
chr1	48938289	48938290	chunk0004_295_1	15.80553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	48938237	48938594	-200017828	-	L2a	LINE	L2	-2	3424	3033	9
chr1	48973907	48973908	chunk0004_299_1	59.2444	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	48973342	48973977	-199982445	+	L1M6	LINE	L1	35	674	-5822	9
chr1	48991383	48991384	chunk0004_301_1	8.8907	AR_DHT_Control	chr1	48990633	48994083	-199962339	-	L1MA3	LINE	L1	-4045	3520	10	9
chr1	49021657	49021658	chunk0004_302_1	11.193	AR_DHT_Control	chr1	49021340	49021707	-199934715	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	9
chr1	49063636	49063637	chunk0004_306_1	10.1096	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	49063524	49063831	-199892591	-	L2a	LINE	L2	-1	3425	3045	9
chr1	49173860	49173861	chunk0004_307_1	5.89231	AR_DHT_Control	chr1	49173486	49174448	-199781974	-	L2a	LINE	L2	-17	3409	1486	9
chr1	49248464	49248465	chunk0004_308_1	5.82105	AR_DHT_Control	chr1	49248378	49248542	-199707880	-	MIR	SINE	MIR	-61	201	31	9
chr1	49333139	49333140	chunk0004_310_1	149.4695	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	49333135	49333184	-199623238	+	L1PA7	LINE	L1	6098	6146	-8	9
chr1	49340774	49340775	chunk0004_313_1	28.56714	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	49340671	49341245	-199615177	+	MER41C	LTR	ERV1	1	521	0	9
chr1	49347004	49347005	chunk0004_314_1	80.1562	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	49346810	49347240	-199609182	+	MER41C	LTR	ERV1	1	398	-123	9
chr1	49584821	49584822	chunk0004_316_1	12.3561	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	49584805	49584932	-199371490	-	MIR	SINE	MIR	-63	205	61	9
chr1	49639477	49639478	chunk0004_318_1	36.06185	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	49639463	49639573	-199316849	-	MIR	SINE	MIR	-105	157	36	9
chr1	50209947	50209948	chunk0004_330_1	10.1214	AR_DHT_Control	chr1	50209901	50210174	-198746248	-	L2a	LINE	L2	-198	3177	2856	9
chr1	50369658	50369659	chunk0004_331_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	50369597	50369727	-198586695	-	MIRb	SINE	MIR	-116	152	2	9
chr1	50463121	50463122	chunk0004_332_1	22.2714	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	50462928	50463465	-198492957	+	MER68	LTR	ERVL	5	563	0	9
chr1	50821729	50821730	chunk0004_343_1	5.55081	AR_DHT_Control	chr1	50821543	50821761	-198134661	+	MIR	SINE	MIR	20	248	-14	9
chr1	51119559	51119560	chunk0004_349_1	44.54957	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	51119509	51119806	-197836616	+	AluJr4	SINE	Alu	1	291	-21	9
chr1	51255837	51255838	chunk0004_351_1	14.62974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51255645	51256036	-197700386	-	L1ME3A	LINE	L1	-1162	4984	4579	9
chr1	51283527	51283528	chunk0004_352_1	8.41723	AR_DHT_Control	chr1	51283335	51283572	-197672850	+	MIR	SINE	MIR	1	262	0	9
chr1	51467197	51467198	chunk0004_354_1	48.7794	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51466875	51467579	-197488843	+	L1ME4b	LINE	L1	9	651	-241	9
chr1	51581519	51581520	chunk0004_369_1	44.4035	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	51581223	51581664	-197374758	-	L1MC3	LINE	L1	-370	7415	6961	9
chr1	51639199	51639200	chunk0004_370_1	4.83532	AR_DHT_Control	chr1	51639057	51639276	-197317146	-	L1ME2	LINE	L1	-2	6162	5938	9
chr1	51654227	51654228	chunk0004_371_1	9.68843	AR_DHT_Control	chr1	51654030	51654476	-197301946	-	L1MC5	LINE	L1	-79	2912	2559	9
chr1	51679753	51679754	chunk0004_375_1	17.22251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51679502	51680009	-197276413	+	MER44B	DNA	TcMar-Tigger	1	549	-1	9
chr1	51762745	51762746	chunk0004_378_1	20.05111	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51762727	51762819	-197193603	-	L1ME3G	LINE	L1	-284	640	549	9
chr1	51890155	51890156	chunk0004_387_1	69.8256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	51889871	51891047	-197065375	+	L1MC4	LINE	L1	6664	7983	-12	9
chr1	51917006	51917007	chunk0004_388_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	51917003	51917225	-197039197	+	MIR	SINE	MIR	14	238	-24	9
chr1	51948855	51948856	chunk0004_389_1	373.4111	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	51948637	51948946	-197007476	+	L2a	LINE	L2	3084	3426	0	9
chr1	51956550	51956551	chunk0004_391_1	5.95209	AR_DHT_Control	chr1	51956497	51956720	-196999702	+	L2b	LINE	L2	2918	3138	-237	9
chr1	51977395	51977396	chunk0004_392_1	8.90544	AR_DHT_Control	chr1	51977318	51977588	-196978834	-	L2b	LINE	L2	0	3375	3120	9
chr1	52037574	52037575	chunk0004_393_1	6.22495	AR_DHT_Control	chr1	52037510	52037919	-196918503	-	Tigger2	DNA	TcMar-Tigger	-1135	1583	1240	1
chr1	52098266	52098267	chunk0004_396_1	9.56998	AR_DHT_Control	chr1	52097918	52098447	-196857975	-	MER1A	DNA	hAT-Charlie	-1	528	1	1
chr1	52126062	52126063	chunk0004_397_1	8.15319	AR_DHT_Control	chr1	52125768	52126368	-196830054	-	Tigger6a	DNA	TcMar-Tigger	-441	642	1	1
chr1	52152870	52152871	chunk0004_398_1	25.2708	AR_DHT_Control	chr1	52152822	52153215	-196803207	-	ERV3-16A3_LTR	LTR	ERVL	0	422	23	1
chr1	52158360	52158361	chunk0004_399_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52157705	52158790	-196797632	-	ERV3-16A3_I-int	LTR	ERVL	-3711	1515	248	1
chr1	52192200	52192201	chunk0004_400_1	73.67501	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52191757	52192213	-196764209	+	MamRTE1	LINE	RTE-BovB	3269	3766	-46	1
chr1	52209808	52209809	chunk0004_401_1	6.48643	AR_DHT_Control	chr1	52209669	52210170	-196746252	-	L2c	LINE	L2	-351	3036	2534	1
chr1	52258117	52258118	chunk0004_404_1	52.9354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	52258076	52258264	-196698158	-	L2a	LINE	L2	-12	3414	3211	1
chr1	52259915	52259916	chunk0004_405_1	6.36834	AR_DHT_Control	chr1	52259862	52260322	-196696100	-	L1ME3G	LINE	L1	-328	596	88	1
chr1	52303058	52303059	chunk0004_406_1	9.01503	AR_DHT_Control	chr1	52302827	52303125	-196653297	+	AluSx	SINE	Alu	1	298	-14	1
chr1	52307083	52307084	chunk0004_408_1	13.71612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52305489	52307095	-196649327	+	MER52A	LTR	ERV1	1	1755	0	1
chr1	52308838	52308839	chunk0004_409_1	34.40247	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52308523	52308928	-196647494	+	L2b	LINE	L2	2956	3370	-5	1
chr1	52523611	52523612	chunk0004_421_1	7.69414	AR_DHT_Control	chr1	52523323	52523626	-196432796	+	AluSz	SINE	Alu	1	311	-1	1
chr1	52574770	52574771	chunk0004_422_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	52574592	52574972	-196381450	+	L2c	LINE	L2	2990	3387	0	1
chr1	52766600	52766601	chunk0004_428_1	8.95381	AR_DHT_Control	chr1	52766385	52766708	-196189714	-	L1MDa	LINE	L1	-5369	1264	935	1
chr1	52913383	52913384	chunk0004_432_1	6.49378	AR_DHT_Control	chr1	52913325	52913568	-196042854	+	L2	LINE	L2	1872	2126	-1293	1
chr1	52928230	52928231	chunk0004_433_1	6.58498	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	52927976	52928373	-196028049	+	L2c	LINE	L2	2957	3381	-6	1
chr1	52940513	52940514	chunk0004_434_1	25.5446	AR_DHT_Control	chr1	52940492	52940704	-196015718	+	MIR	SINE	MIR	34	261	-1	1
chr1	52967765	52967766	chunk0004_436_1	8.57499	AR_DHT_Control	chr1	52967599	52968014	-195988408	-	LTR3B	LTR	ERVK	-5	432	9	1
chr1	53107780	53107781	chunk0004_439_1	23.7205	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	53107707	53107841	-195848581	+	L2a	LINE	L2	3290	3426	0	1
chr1	53448327	53448328	chunk0004_452_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	53448029	53448912	-195507510	-	MER21C	LTR	ERVL	-40	898	1	1
chr1	53796421	53796422	chunk0004_462_1	10.6691	AR_DHT_Control	chr1	53796355	53796490	-195159932	+	L2a	LINE	L2	3277	3421	-5	1
chr1	53919224	53919225	chunk0005_1_1	13.2288	AR_DHT_Control	chr1	53919152	53919277	-195037145	+	MLT1H	LTR	ERVL-MaLR	43	167	-322	1
chr1	53942758	53942759	chunk0005_2_1	8.67324	AR_DHT_Control	chr1	53942696	53942866	-195013556	-	L2c	LINE	L2	-7	3380	3225	1
chr1	54077649	54077650	chunk0005_10_1	17.84262	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	54077583	54077757	-194878665	+	L2c	LINE	L2	3229	3425	-1	1
chr1	54094421	54094422	chunk0005_14_1	28.15188	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	54094357	54094461	-194861961	-	L1ME3A	LINE	L1	-2	6171	6056	1
chr1	54266406	54266407	chunk0005_15_1	32.6351	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	54266403	54266539	-194689883	+	MER58A	DNA	hAT-Charlie	54	224	0	1
chr1	54370785	54370786	chunk0005_23_1	8.4957	AR_DHT_Control	chr1	54370741	54370805	-194585617	+	Tigger14a	DNA	TcMar-Tigger	91	154	-170	1
chr1	54601088	54601089	chunk0005_30_1	4.83532	AR_DHT_Control	chr1	54601066	54601204	-194355218	+	(GT)n	Simple_repeat	Simple_repeat	1	138	0	1
chr1	54725043	54725044	chunk0005_32_1	4.63316	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	54724772	54725624	-194230798	+	L1M4	LINE	L1	1	846	-6671	1
chr1	54834235	54834236	chunk0005_33_1	31.9155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54834148	54834246	-194122176	+	L2b	LINE	L2	3061	3166	-209	1
chr1	54834946	54834947	chunk0005_34_1	12.90298	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54834896	54835043	-194121379	-	L1ME2z	LINE	L1	-95	6349	6199	1
chr1	54869277	54869278	chunk0005_35_1	15.20692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	54869120	54869612	-194086810	+	L1ME3G	LINE	L1	129	515	-409	1
chr1	54881217	54881218	chunk0005_37_1	43.6852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54881169	54882144	-194074278	+	L1PA13	LINE	L1	5162	6163	0	1
chr1	54882614	54882615	chunk0005_41_1	108.0989	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	54882156	54882948	-194073474	+	L1ME1	LINE	L1	5463	6250	-102	1
chr1	54888527	54888528	chunk0005_43_1	50.5775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	54888143	54888563	-194067859	+	L2b	LINE	L2	2932	3374	-1	1
chr1	54978054	54978055	chunk0005_48_1	7.64898	AR_DHT_Control	chr1	54977957	54978080	-193978342	-	L2c	LINE	L2	-185	3202	3078	1
chr1	55149690	55149691	chunk0005_53_1	11.0099	AR_DHT_Control	chr1	55149589	55149896	-193806526	+	Kanga11a	DNA	TcMar-Tc2	1	311	-659	1
chr1	55781161	55781162	chunk0005_69_1	21.02921	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	55779895	55783183	-193173239	-	ERVL-int	LTR	ERVL	0	5757	2244	1
chr1	55823904	55823905	chunk0005_70_1	6.58746	AR_DHT_Control	chr1	55823672	55823930	-193132492	-	L2c	LINE	L2	-5	3382	3073	1
chr1	56007759	56007760	chunk0005_79_1	5.0408	AR_DHT_Control	chr1	56007485	56008333	-192948089	+	LTR82A	LTR	ERVL	20	865	-7	1
chr1	56101931	56101932	chunk0005_83_1	7.91724	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	56101840	56102151	-192854271	-	MLT1B-int	LTR	ERVL-MaLR	-148	1239	918	1
chr1	56102611	56102612	chunk0005_84_1	12.0793	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	56102603	56103911	-192852511	-	L1MA5A	LINE	L1	0	6297	4960	1
chr1	56146800	56146801	chunk0005_85_1	14.5626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	56146361	56146807	-192809615	-	L3	LINE	CR1	-293	3806	3333	1
chr1	56240101	56240102	chunk0005_88_1	17.07294	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	56239893	56240690	-192715732	+	L1MC5	LINE	L1	8506	9289	-15	1
chr1	56311851	56311852	chunk0005_89_1	4.19326	AR_DHT_Control	chr1	56311787	56312011	-192644411	+	L2c	LINE	L2	3064	3304	-83	1
chr1	56340222	56340223	chunk0005_90_1	5.36932	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	56339826	56340459	-192615963	+	L1M2c	LINE	L1	8	657	-6132	1
chr1	56372728	56372729	chunk0005_92_1	17.70372	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	56372054	56372753	-192583669	-	L1ME3Cz	LINE	L1	-310	687	2	1
chr1	56473744	56473745	chunk0005_97_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	56473656	56473780	-192482642	+	L2a	LINE	L2	3299	3426	0	1
chr1	56567783	56567784	chunk0005_103_1	46.74054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	56567713	56568342	-192388080	+	L1MB8	LINE	L1	5550	6172	-6	1
chr1	56610903	56610904	chunk0005_106_1	70.92649	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	56610383	56614148	-192342274	+	L1PA6	LINE	L1	2327	6145	-9	1
chr1	56627709	56627710	chunk0005_109_1	25.95085	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	56627700	56627988	-192328434	-	MLT1I	LTR	ERVL-MaLR	0	411	93	1
chr1	56634702	56634703	chunk0005_113_1	8.60056	AR_DHT_Control	chr1	56634599	56635057	-192321365	-	L2c	LINE	L2	0	3387	2870	1
chr1	56733735	56733736	chunk0005_115_1	25.7211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	56733205	56734388	-192222034	-	L1P1	LINE	L1	-2768	3378	2175	1
chr1	56765128	56765129	chunk0005_116_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	56765072	56765923	-192190499	-	L1MDa	LINE	L1	-5731	902	18	1
chr1	56765810	56765811	chunk0005_117_1	6.54035	AR_DHT_Control	chr1	56765072	56765923	-192190499	-	L1MDa	LINE	L1	-5731	902	18	1
chr1	56780512	56780513	chunk0005_118_1	4.11961	AR_DHT_Control	chr1	56780486	56780586	-192175836	+	MIR	SINE	MIR	15	117	-145	1
chr1	56813009	56813010	chunk0005_125_1	32.71121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	56812879	56813202	-192143220	-	MLT1B	LTR	ERVL-MaLR	-2	388	106	1
chr1	57006363	57006364	chunk0005_127_1	6.35432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	57006216	57006595	-191949827	+	L2	LINE	L2	2341	2738	-681	1
chr1	57011803	57011804	chunk0005_128_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	57011708	57011876	-191944546	-	MIRb	SINE	MIR	-17	251	54	1
chr1	57639561	57639562	chunk0005_143_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	57639463	57639597	-191316825	-	L2b	LINE	L2	-558	2861	2723	1
chr1	57933621	57933622	chunk0005_148_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	57933426	57933901	-191022521	-	L1ME2z	LINE	L1	-477	5967	5485	1
chr1	58118995	58118996	chunk0005_150_1	11.9693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	58118962	58119035	-190837387	+	MER33	DNA	hAT-Charlie	8	90	-2534	1
chr1	58183379	58183380	chunk0005_154_1	64.921	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	58180594	58183590	-190772832	-	L1MB7	LINE	L1	-3110	3036	339	1
chr1	58295061	58295062	chunk0005_159_1	18.94994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	58295049	58295271	-190661151	+	L2b	LINE	L2	3137	3375	0	1
chr1	58404110	58404111	chunk0005_161_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	58404001	58404172	-190552250	+	L3	LINE	CR1	3777	3983	-116	1
chr1	58483523	58483524	chunk0005_163_1	5.59693	AR_DHT_Control	chr1	58483509	58483621	-190472801	+	L2c	LINE	L2	3288	3383	-4	1
chr1	58578035	58578036	chunk0005_170_1	6.26854	AR_DHT_Control	chr1	58578031	58578065	-190378357	+	(CA)n	Simple_repeat	Simple_repeat	1	34	0	1
chr1	58598015	58598016	chunk0005_172_1	9.01771	AR_DHT_Control	chr1	58597971	58598533	-190357889	+	LTR67B	LTR	ERVL	5	612	-8	1
chr1	58620405	58620406	chunk0005_173_1	7.26927	AR_DHT_Control	chr1	58620387	58620465	-190335957	+	MIRb	SINE	MIR	119	196	-72	1
chr1	58988974	58988975	chunk0005_198_1	37.8409	AR_DHT_Control	chr1	58988908	58989216	-189967206	+	L2c	LINE	L2	3018	3353	-22	1
chr1	59062253	59062254	chunk0005_201_1	11.401	AR_DHT_Control	chr1	59061923	59062315	-189894107	+	MLT1J2	LTR	ERVL-MaLR	17	448	0	1
chr1	59071523	59071524	chunk0005_203_1	361.8651	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59071374	59072018	-189884404	+	LTR50	LTR	ERVL	55	792	-3	1
chr1	59098373	59098374	chunk0005_206_1	52.8785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59098082	59098397	-189858025	-	MLT1J	LTR	ERVL-MaLR	-152	360	56	1
chr1	59099280	59099281	chunk0005_207_1	16.3237	AR_DHT_Control	chr1	59099209	59099298	-189857124	+	L2b	LINE	L2	3262	3349	-38	1
chr1	59144725	59144726	chunk0005_211_1	14.8435	AR_DHT_Control	chr1	59144725	59144873	-189811549	-	MIRb	SINE	MIR	-1	267	109	1
chr1	59225719	59225720	chunk0005_216_1	21.38295	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	59225483	59225721	-189730701	+	MIR	SINE	MIR	16	260	-2	1
chr1	59286677	59286678	chunk0005_222_1	33.48324	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59286126	59287577	-189668845	+	L1M2	LINE	L1	4617	6075	-1130	1
chr1	59355000	59355001	chunk0005_223_1	6.79294	AR_DHT_Control	chr1	59354640	59355188	-189601234	-	L2a	LINE	L2	-5	3421	2772	1
chr1	59451853	59451854	chunk0005_233_1	34.4138	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59451594	59452226	-189504196	-	L1MEj	LINE	L1	-704	1456	823	1
chr1	59460792	59460793	chunk0005_234_1	22.9912	AR_DHT_Control	chr1	59460097	59461770	-189494652	+	L1PA6	LINE	L1	175	1856	-4328	1
chr1	59464043	59464044	chunk0005_236_1	25.43576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	59463205	59467507	-189488915	+	L1PA6	LINE	L1	1848	6151	-3	1
chr1	59488143	59488144	chunk0005_238_1	14.0067	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59488030	59488242	-189468180	-	L1ME4a	LINE	L1	-190	5934	5714	1
chr1	59667185	59667186	chunk0005_249_1	178.4495	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	59667042	59667224	-189289198	+	MIRb	SINE	MIR	4	254	-14	1
chr1	59751451	59751452	chunk0005_257_1	30.27481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59751361	59751488	-189204934	-	Charlie7a	DNA	hAT-Charlie	-15	257	131	1
chr1	59775583	59775584	chunk0005_263_1	39.06418	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59775395	59775589	-189180833	-	MIRb	SINE	MIR	-72	196	8	1
chr1	59789237	59789238	chunk0005_265_1	29.2738	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59789086	59789371	-189167051	-	L2c	LINE	L2	-15	3372	3124	1
chr1	59831674	59831675	chunk0005_268_1	7.67158	AR_DHT_Control	chr1	59831162	59831882	-189124540	-	L1ME1	LINE	L1	-5626	774	63	1
chr1	59902177	59902178	chunk0005_272_1	17.52301	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	59901627	59902222	-189054200	+	L2c	LINE	L2	2525	3176	-211	1
chr1	59917450	59917451	chunk0005_273_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	59917352	59917516	-189038906	-	MIR	SINE	MIR	-37	225	40	1
chr1	59941363	59941364	chunk0005_275_1	98.9349	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	59941210	59941935	-189014487	+	Tigger3b	DNA	TcMar-Tigger	1	768	-463	1
chr1	59973091	59973092	chunk0005_279_1	80.93729	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	59972865	59973253	-188983169	+	L2b	LINE	L2	2887	3283	-92	1
chr1	60094882	60094883	chunk0005_284_1	110.9566	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	60094529	60097285	-188859137	-	L1ME3A	LINE	L1	-151	6022	3096	1
chr1	60126956	60126957	chunk0005_292_1	6.6833	AR_DHT_Control	chr1	60126786	60127946	-188828476	+	ERVL-E-int	LTR	ERVL	4051	5245	-422	1
chr1	60274878	60274879	chunk0005_296_1	211.8202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	60274700	60274928	-188681494	-	MIRb	SINE	MIR	-1	267	25	1
chr1	60350723	60350724	chunk0005_299_1	72.4822	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	60350692	60350742	-188605680	-	L2a	LINE	L2	0	3426	3377	1
chr1	60388134	60388135	chunk0005_302_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	60388047	60388453	-188567969	-	LTR16A1	LTR	ERVL	-7	449	8	1
chr1	60504442	60504443	chunk0005_305_1	5.12066	AR_DHT_Control	chr1	60504364	60504536	-188451886	+	MIRb	SINE	MIR	66	261	-7	1
chr1	60548320	60548321	chunk0005_306_1	17.1871	AR_DHT_Control	chr1	60548289	60548388	-188408034	-	L2c	LINE	L2	-270	3117	3017	1
chr1	60582957	60582958	chunk0005_311_1	9.02033	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	60582809	60583383	-188373039	-	L1MEd	LINE	L1	-3925	2475	1825	1
chr1	60716256	60716257	chunk0005_317_1	27.0049	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	60715583	60716449	-188239973	-	L1MC1	LINE	L1	-2	6331	5447	1
chr1	60765199	60765200	chunk0005_319_1	15.00521	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	60765129	60765270	-188191152	+	MER58A	DNA	hAT-Charlie	65	224	0	1
chr1	60898991	60898992	chunk0005_321_1	11.142	AR_DHT_Control	chr1	60898896	60899180	-188057242	-	L2c	LINE	L2	0	3387	3108	1
chr1	60931359	60931360	chunk0005_322_1	5.6425	AR_DHT_Control	chr1	60931335	60931362	-188025060	+	(AC)n	Simple_repeat	Simple_repeat	1	27	0	1
chr1	60940788	60940789	chunk0005_323_1	11.3067	AR_DHT_Control	chr1	60940584	60940989	-188015433	-	MER51B	LTR	ERV1	0	377	1	1
chr1	61003931	61003932	chunk0005_324_1	7.09019	AR_DHT_Control	chr1	61003882	61004030	-187952392	+	L2c	LINE	L2	3138	3272	-115	1
chr1	61133473	61133474	chunk0005_335_1	106.8424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	61133434	61133554	-187822868	+	L2a	LINE	L2	3301	3425	-1	1
chr1	61143237	61143238	chunk0005_337_1	15.94705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	61143193	61143241	-187813181	+	L2b	LINE	L2	3322	3367	-8	1
chr1	61143923	61143924	chunk0005_338_1	19.85371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	61143872	61144028	-187812394	+	Tigger15a	DNA	TcMar-Tigger	86	251	-464	1
chr1	61152872	61152873	chunk0005_340_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	61152837	61152977	-187803445	+	L2c	LINE	L2	3243	3385	-2	1
chr1	61526206	61526207	chunk0005_364_1	22.22969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	61526130	61526368	-187430054	-	MIR	SINE	MIR	-21	241	1	1
chr1	61542798	61542799	chunk0005_366_1	7.03383	AR_DHT_Control	chr1	61541780	61543701	-187412721	-	L1PB1	LINE	L1	-28	6991	5116	1
chr1	61601821	61601822	chunk0005_369_1	8.27376	AR_DHT_Control	chr1	61601744	61601851	-187354571	-	L2c	LINE	L2	0	3387	3282	1
chr1	61700613	61700614	chunk0005_376_1	42.1484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	61700610	61700658	-187255764	-	L2b	LINE	L2	-3	3372	3325	1
chr1	61976237	61976238	chunk0005_384_1	83.3221	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	61976237	61976394	-186980028	+	MIRb	SINE	MIR	23	186	-82	1
chr1	62144446	62144447	chunk0005_389_1	8.35541	AR_DHT_Control	chr1	62144314	62144506	-186811916	-	L3	LINE	CR1	-488	3611	3373	1
chr1	62342017	62342018	chunk0005_396_1	37.8612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	62341933	62342065	-186614357	-	MIR	SINE	MIR	-71	191	50	1
chr1	62367221	62367222	chunk0005_399_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	62366909	62367293	-186589129	+	MSTD	LTR	ERVL-MaLR	1	386	-10	1
chr1	62500934	62500935	chunk0005_402_1	18.19171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	62500883	62501036	-186455386	+	AluJr	SINE	Alu	130	282	-30	1
chr1	62558261	62558262	chunk0005_406_1	27.2636	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	62557839	62558323	-186398099	+	L2c	LINE	L2	2645	3159	-228	1
chr1	62659801	62659802	chunk0005_414_1	25.17201	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	62658974	62660392	-186296030	+	L1MDa	LINE	L1	1935	3361	-3176	1
chr1	62707529	62707530	chunk0005_419_1	28.90336	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	62707122	62707791	-186248631	-	L2c	LINE	L2	-15	3372	2711	1
chr1	62742865	62742866	chunk0005_422_1	21.4704	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	62739588	62743573	-186212849	+	L1PB1	LINE	L1	2478	6506	-361	1
chr1	62749811	62749812	chunk0005_424_1	26.3119	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	62749679	62750069	-186206353	-	MLT1F2	LTR	ERVL-MaLR	-40	614	165	1
chr1	63245364	63245365	chunk0005_434_1	26.09449	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63245158	63245576	-185710846	-	MLT1A1	LTR	ERVL-MaLR	-1	407	2	1
chr1	63298993	63298994	chunk0005_438_1	13.2288	AR_DHT_Control	chr1	63298934	63299090	-185657332	+	L2c	LINE	L2	3231	3386	-1	1
chr1	63421065	63421066	chunk0005_443_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63420932	63421153	-185535269	-	L2a	LINE	L2	-5	3421	3181	1
chr1	63487763	63487764	chunk0005_450_1	40.6556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	63487433	63487766	-185468656	-	Tigger3a	DNA	TcMar-Tigger	-1	347	2	1
chr1	63498367	63498368	chunk0005_452_1	34.222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	63497999	63499156	-185457266	+	L1M4	LINE	L1	2429	3554	-2592	1
chr1	63547799	63547800	chunk0005_454_1	37.4067	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	63547557	63548048	-185408374	-	MLT1H	LTR	ERVL-MaLR	0	549	16	1
chr1	63701479	63701480	chunk0005_459_1	18.11058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63701451	63701553	-185254869	+	MIR3	SINE	MIR	17	121	-87	1
chr1	63881001	63881002	chunk0006_9_1	24.1589	AR_DHT_Control	chr1	63880804	63881676	-185074746	-	L4_C_Mam	LINE	RTE-X	-2506	2632	1720	1
chr1	63901839	63901840	chunk0006_11_1	137.9182	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	63901809	63901887	-185054535	-	L2c	LINE	L2	-38	3349	3256	1
chr1	63948119	63948120	chunk0006_18_1	69.424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63947942	63948160	-185008262	-	MIR	SINE	MIR	-19	243	24	1
chr1	63981192	63981193	chunk0006_20_1	11.8523	AR_DHT_Control	chr1	63981127	63981317	-184975105	-	MIRb	SINE	MIR	-10	258	23	1
chr1	63983942	63983943	chunk0006_21_1	36.4565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	63983737	63983965	-184972457	+	MIRb	SINE	MIR	13	261	-7	1
chr1	64023702	64023703	chunk0006_25_1	5.03921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	64023652	64023815	-184932607	-	L1ME4a	LINE	L1	-148	5976	5805	1
chr1	64137756	64137757	chunk0006_30_1	8.5314	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64137717	64137843	-184818579	-	L2b	LINE	L2	0	3375	3255	1
chr1	64321669	64321670	chunk0006_35_1	7.63982	AR_DHT_Control	chr1	64321545	64321886	-184634536	+	L2c	LINE	L2	2980	3349	-38	1
chr1	64349307	64349308	chunk0006_38_1	5.46037	AR_DHT_Control	chr1	64349002	64349715	-184606707	+	(GT)n	Simple_repeat	Simple_repeat	1	758	0	1
chr1	64370260	64370261	chunk0006_41_1	35.02109	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64370122	64370635	-184585787	-	L2a	LINE	L2	-173	3253	2657	1
chr1	64474881	64474882	chunk0006_43_1	7.38866	AR_DHT_Control	chr1	64474710	64475002	-184481420	+	MamRTE1	LINE	RTE-BovB	3210	3496	-316	1
chr1	64484949	64484950	chunk0006_45_1	28.9513	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	64484517	64485185	-184471237	-	L1MB3	LINE	L1	-57	6126	5450	1
chr1	64514734	64514735	chunk0006_50_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	64514724	64515016	-184441406	-	L3	LINE	CR1	-1088	3011	2666	1
chr1	64536424	64536425	chunk0006_52_1	35.8668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64536363	64536478	-184419944	+	UCON37	Unknown	Unknown	3	130	-13	1
chr1	64564499	64564500	chunk0006_58_1	13.52479	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64564004	64564610	-184391812	+	MER34C2	LTR	ERV1	3	555	0	1
chr1	64727574	64727575	chunk0006_63_1	23.6354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64727479	64727575	-184228847	+	L3b	LINE	CR1	4964	5067	-165	1
chr1	64760948	64760949	chunk0006_66_1	82.48562	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	64760919	64761136	-184195286	+	MIRb	SINE	MIR	36	267	-1	1
chr1	64822726	64822727	chunk0006_67_1	80.13167	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	64822519	64823116	-184133306	+	L1MB7	LINE	L1	5976	6580	-102	1
chr1	64872591	64872592	chunk0006_72_1	31.5634	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	64872359	64872686	-184083736	+	L2a	LINE	L2	3102	3426	0	1
chr1	64932693	64932694	chunk0006_74_1	4.88212	AR_DHT_Control	chr1	64932608	64932718	-184023704	-	L1MD3	LINE	L1	0	8042	7887	1
chr1	64944521	64944522	chunk0006_76_1	17.8267	AR_DHT_Control	chr1	64944243	64944570	-184011852	+	L1M4	LINE	L1	5393	5754	-370	1
chr1	64989537	64989538	chunk0006_85_1	18.4345	AR_DHT_Control	chr1	64989380	64990025	-183966397	+	L1MB4	LINE	L1	177	979	-6641	1
chr1	65031285	65031286	chunk0006_86_1	34.777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65031183	65031857	-183924565	+	L1MC4	LINE	L1	7320	7987	-55	1
chr1	65153846	65153847	chunk0006_94_1	138.0909	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65153712	65154333	-183802089	-	L2b	LINE	L2	-194	3181	2518	1
chr1	65157351	65157352	chunk0006_97_1	21.70849	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	65157271	65157375	-183799047	-	L1ME4b	LINE	L1	-380	512	408	1
chr1	65277043	65277044	chunk0006_101_1	8.27376	AR_DHT_Control	chr1	65276662	65277123	-183679299	-	L1MEg	LINE	L1	-5768	467	10	1
chr1	65378107	65378108	chunk0006_102_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	65377887	65378287	-183578135	+	L2c	LINE	L2	2481	2842	-577	1
chr1	65428151	65428152	chunk0006_103_1	15.3768	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65427943	65428164	-183528258	+	MER58A	DNA	hAT-Charlie	3	224	0	1
chr1	65504094	65504095	chunk0006_109_1	17.3131	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65503833	65504918	-183451504	+	L1MC3	LINE	L1	6648	7774	-11	1
chr1	65565891	65565892	chunk0006_115_1	11.1716	AR_DHT_Control	chr1	65565845	65565906	-183390516	+	(CA)n	Simple_repeat	Simple_repeat	1	61	0	1
chr1	65584741	65584742	chunk0006_116_1	27.91063	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65584168	65584877	-183371545	-	L1MC4a	LINE	L1	-1002	6880	6166	1
chr1	65677790	65677791	chunk0006_118_1	7.72121	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65676963	65677969	-183278453	+	L1ME1	LINE	L1	614	1765	-5338	1
chr1	65719514	65719515	chunk0006_119_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	65717010	65719916	-183236506	-	L1M1	LINE	L1	-4630	2935	23	1
chr1	65758440	65758441	chunk0006_122_1	32.7938	AR_DHT_Control	chr1	65758037	65758778	-183197644	+	MER49	LTR	ERV1	180	923	0	1
chr1	65764211	65764212	chunk0006_123_1	36.7997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	65764089	65764604	-183191818	+	LTR37-int	LTR	ERV1	3430	3965	-95	1
chr1	65921650	65921651	chunk0006_128_1	108.5056	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	65921540	65921746	-183034676	-	MER58A	DNA	hAT-Charlie	-9	215	6	1
chr1	65946977	65946978	chunk0006_131_1	7.52656	AR_DHT_Control	chr1	65946471	65947469	-183008953	-	ERV3-16A3_I-int	LTR	ERVL	-821	3291	2122	1
chr1	65948989	65948990	chunk0006_132_1	9.83377	AR_DHT_Control	chr1	65948705	65950433	-183005989	-	ERV3-16A3_I-int	LTR	ERVL	-3370	1856	3	1
chr1	66279816	66279817	chunk0006_145_1	9.1087	AR_DHT_Control	chr1	66279646	66280017	-182676405	-	MLT2C1	LTR	ERVL	0	397	3	1
chr1	66508005	66508006	chunk0006_166_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	66507555	66508009	-182448413	+	LTR56	LTR	ERV1	1	437	0	1
chr1	66538670	66538671	chunk0006_168_1	36.4272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	66538596	66538812	-182417610	-	Tigger16a	DNA	TcMar-Tigger	0	957	722	1
chr1	66719748	66719749	chunk0006_172_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	66719678	66719762	-182236660	-	MLT1L	LTR	ERVL-MaLR	-15	595	508	1
chr1	66867879	66867880	chunk0006_173_1	102.2373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	66867722	66868047	-182088375	-	L1MEd	LINE	L1	-1912	4234	3905	1
chr1	67190547	67190548	chunk0006_179_1	31.1231	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	67190525	67190597	-181765825	+	L2a	LINE	L2	3315	3421	-5	1
chr1	67382590	67382591	chunk0006_183_1	14.2141	AR_DHT_Control	chr1	67382511	67382705	-181573717	+	L2c	LINE	L2	2925	3121	-266	1
chr1	67434715	67434716	chunk0006_188_1	49.5668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	67434136	67435107	-181521315	-	L1MB7	LINE	L1	-11	6173	5188	1
chr1	67478187	67478188	chunk0006_190_1	7.2534	AR_DHT_Control	chr1	67478040	67478202	-181478220	+	AluSz	SINE	Alu	134	295	-17	1
chr1	67578787	67578788	chunk0006_196_1	7.8637	AR_DHT_Control	chr1	67578647	67578821	-181377601	-	MIRb	SINE	MIR	-48	220	18	1
chr1	67579877	67579878	chunk0006_197_1	8.02414	AR_DHT_Control	chr1	67579661	67579913	-181376509	+	L2c	LINE	L2	3120	3379	-8	1
chr1	67588541	67588542	chunk0006_199_1	46.413	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	67588523	67588978	-181367444	-	HAL1	LINE	L1	-8	2499	2024	1
chr1	67715761	67715762	chunk0006_205_1	13.40405	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	67715639	67715813	-181240609	+	LTR67B	LTR	ERVL	446	620	0	1
chr1	67760791	67760792	chunk0006_206_1	179.7768	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	67760710	67760863	-181195559	-	L2b	LINE	L2	-1	3374	3214	1
chr1	67814270	67814271	chunk0006_208_1	6.02617	AR_DHT_Control	chr1	67814168	67814286	-181142136	-	MamRep1879	DNA	hAT-Tip100?	-83	133	10	1
chr1	67880257	67880258	chunk0006_212_1	17.55529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	67880221	67880294	-181076128	+	L2b	LINE	L2	3294	3364	-11	1
chr1	68078526	68078527	chunk0006_214_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	68078313	68079151	-180877271	-	L1PA14	LINE	L1	-5797	892	4	1
chr1	68215136	68215137	chunk0006_215_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	68215040	68215200	-180741222	-	MLT1K	LTR	ERVL-MaLR	-419	176	19	1
chr1	68398208	68398209	chunk0006_220_1	82.91632	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	68398004	68398581	-180557841	-	L2b	LINE	L2	-5	3370	2793	1
chr1	68414130	68414131	chunk0006_222_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	68413375	68414391	-180542031	-	L1MC5a	LINE	L1	-2438	339	11	1
chr1	68495596	68495597	chunk0006_224_1	12.811	AR_DHT_Control	chr1	68495532	68495633	-180460789	-	L2b	LINE	L2	-22	3404	3258	1
chr1	68576179	68576180	chunk0006_228_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	68575781	68577787	-180378635	+	L1PA17	LINE	L1	343	2572	-4347	1
chr1	68690819	68690820	chunk0006_230_1	14.96256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	68690744	68690886	-180265536	-	L2b	LINE	L2	-5	3382	3238	1
chr1	68851907	68851908	chunk0006_235_1	13.8979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	68851137	68852192	-180104230	-	L1PB3	LINE	L1	-363	5791	4705	1
chr1	68931690	68931691	chunk0006_237_1	15.1861	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	68931665	68931883	-180024539	-	L2c	LINE	L2	-182	3205	2974	1
chr1	69088679	69088680	chunk0006_242_1	250.9831	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	69088508	69088825	-179867597	+	MER34B-int	LTR	ERV1	124	362	-4994	1
chr1	69122907	69122908	chunk0006_245_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	69122638	69123098	-179833324	-	LTR16C	LTR	ERVL	0	489	27	1
chr1	69418919	69418920	chunk0006_253_1	14.1125	AR_DHT_Control	chr1	69417534	69419427	-179536995	+	L1PA7	LINE	L1	2055	3939	-2207	1
chr1	69510141	69510142	chunk0006_256_1	5.41601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	69509997	69510333	-179446089	-	L2c	LINE	L2	-7	3380	3021	1
chr1	69530640	69530641	chunk0006_258_1	17.78799	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	69528638	69530904	-179425518	-	MER101-int	LTR	ERV1	-1237	5094	2751	1
chr1	69631849	69631850	chunk0006_261_1	30.9862	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	69631847	69632378	-179324044	+	L2a	LINE	L2	2770	3418	-8	1
chr1	69970568	69970569	chunk0006_262_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	69969117	69972925	-178983497	+	L1PB1	LINE	L1	2649	6511	-356	1
chr1	70355139	70355140	chunk0006_275_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	70355067	70355173	-178601249	-	L2b	LINE	L2	-4	3383	3274	1
chr1	70549763	70549764	chunk0006_281_1	16.32739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	70549416	70550212	-178406210	+	L1MCa	LINE	L1	512	1371	-5380	1
chr1	70601553	70601554	chunk0006_283_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	70601468	70601637	-178354785	+	MIRb	SINE	MIR	70	244	-24	1
chr1	70773516	70773517	chunk0006_288_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	70772146	70775263	-178181159	-	L1PA14	LINE	L1	-4141	4014	1	1
chr1	70840317	70840318	chunk0006_289_1	10.0392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	70840297	70840362	-178116060	-	MLT1J2	LTR	ERVL-MaLR	0	448	389	1
chr1	71088884	71088885	chunk0006_296_1	129.1457	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	71088826	71088961	-177867461	-	L2c	LINE	L2	-42	3345	3212	1
chr1	71303911	71303912	chunk0006_300_1	35.5144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	71303874	71304242	-177652180	-	MSTA	LTR	ERVL-MaLR	0	428	3	1
chr1	71321413	71321414	chunk0006_303_1	54.8882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	71321024	71322729	-177633693	+	L1PA7	LINE	L1	2768	4479	-1667	1
chr1	71463066	71463067	chunk0006_315_1	9.54045	AR_DHT_Control	chr1	71463006	71463282	-177493140	-	L2a	LINE	L2	0	3426	3163	1
chr1	71473511	71473512	chunk0006_318_1	6.35715	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	71473463	71474063	-177482359	+	LTR80B	LTR	ERVL	1	579	-5	1
chr1	71648405	71648406	chunk0006_323_1	18.46549	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	71648399	71648472	-177307950	-	MIR3	SINE	MIR	-46	162	90	1
chr1	71761343	71761344	chunk0006_326_1	27.45322	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	71761172	71761390	-177195032	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr1	71782422	71782423	chunk0006_327_1	101.3211	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	71782415	71782646	-177173776	+	L2a	LINE	L2	3186	3411	-15	1
chr1	71821383	71821384	chunk0006_328_1	91.1206	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	71819749	71821797	-177134625	+	ERV3-16A3_I-int	LTR	ERVL	1080	3284	-2383	1
chr1	71875617	71875618	chunk0006_329_1	6.48643	AR_DHT_Control	chr1	71875555	71875685	-177080737	-	MER91A	DNA	hAT-Tip100	-66	130	1	1
chr1	71947831	71947832	chunk0006_333_1	19.8252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	71947599	71947882	-177008540	-	Charlie2a	DNA	hAT-Charlie	-2538	323	15	1
chr1	72042488	72042489	chunk0006_335_1	34.31005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	72042464	72042720	-176913702	+	LTR78	LTR	ERV1	756	1019	-285	1
chr1	72449938	72449939	chunk0006_342_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	72449022	72450392	-176506030	+	L1MA4	LINE	L1	718	1620	-5946	1
chr1	72471557	72471558	chunk0006_343_1	19.76856	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	72471458	72471642	-176484780	-	MER58A	DNA	hAT-Charlie	0	224	5	1
chr1	72589371	72589372	chunk0006_349_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	72589163	72589614	-176366808	+	Tigger13a	DNA	TcMar-Tigger	235	724	-47	1
chr1	72635841	72635842	chunk0006_350_1	10.7282	AR_DHT_Control	chr1	72635805	72636016	-176320406	-	MER20	DNA	hAT-Charlie	0	219	1	1
chr1	72754861	72754862	chunk0006_354_1	23.664	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	72754645	72755503	-176200919	+	L1MD1	LINE	L1	5386	6240	-2	1
chr1	72766637	72766638	chunk0006_355_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	72766491	72766688	-176189734	-	MER58A	DNA	hAT-Charlie	-6	218	4	1
chr1	73107031	73107032	chunk0006_365_1	50.6049	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	73106554	73107272	-175849150	+	L1PA17	LINE	L1	5717	6447	-867	1
chr1	73203523	73203524	chunk0006_369_1	30.3634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	73203440	73203742	-175752680	+	L1M4c	LINE	L1	3529	3875	-2851	1
chr1	73321600	73321601	chunk0006_371_1	113.9726	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	73321177	73321680	-175634742	-	L1PA17	LINE	L1	-7	7327	6836	1
chr1	73765755	73765756	chunk0006_374_1	8.46955	AR_DHT_Control	chr1	73765645	73765818	-175190604	+	L2c	LINE	L2	3182	3359	-28	1
chr1	74071399	74071400	chunk0006_375_1	9.62049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	74071331	74071671	-174884751	+	LTR80A	LTR	ERVL	211	568	-15	1
chr1	74698139	74698140	chunk0006_385_1	20.3005	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	74698034	74698453	-174257969	-	L2c	LINE	L2	-836	2583	2109	1
chr1	74739361	74739362	chunk0006_388_1	6.48643	AR_DHT_Control	chr1	74739230	74740016	-174216406	-	L2a	LINE	L2	-11	3376	2504	1
chr1	75003439	75003440	chunk0006_389_1	164.526	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	75003336	75003524	-173952898	-	MIRb	SINE	MIR	0	268	86	1
chr1	75068023	75068024	chunk0006_391_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	75067467	75068316	-173888106	-	L1PA17	LINE	L1	-5595	1554	695	1
chr1	75315541	75315542	chunk0006_393_1	9.57048	AR_DHT_Control	chr1	75315472	75316150	-173640272	+	L2c	LINE	L2	2088	2900	-519	1
chr1	75368467	75368468	chunk0006_395_1	6.04605	AR_DHT_Control	chr1	75368416	75368480	-173587942	-	MER2B	DNA	TcMar-Tigger	-272	64	1	1
chr1	75386581	75386582	chunk0006_396_1	10.1791	AR_DHT_Control	chr1	75383477	75388208	-173568214	+	L1PA2	LINE	L1	1409	6139	-16	1
chr1	75450736	75450737	chunk0006_399_1	9.21264	AR_DHT_Control	chr1	75450010	75451659	-173504763	+	L1PA16	LINE	L1	60	1812	-5041	1
chr1	75588938	75588939	chunk0006_402_1	31.2768	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	75588768	75588952	-173367470	-	L2c	LINE	L2	0	3375	3192	1
chr1	75591007	75591008	chunk0006_404_1	15.4138	AR_DHT_Control	chr1	75589486	75591231	-173365191	+	L1MA1	LINE	L1	13	1918	-5647	1
chr1	75969696	75969697	chunk0006_412_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	75969358	75969907	-172986515	-	L2c	LINE	L2	0	3375	2815	1
chr1	76069133	76069134	chunk0006_415_1	110.2078	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	76068861	76069177	-172887245	+	MER58B	DNA	hAT-Charlie	1	336	-5	1
chr1	76143992	76143993	chunk0006_422_1	10.8679	AR_DHT_Control	chr1	76143866	76144083	-172812339	+	MIR	SINE	MIR	22	250	-12	1
chr1	76515928	76515929	chunk0006_434_1	6.0927	AR_DHT_Control	chr1	76514802	76516100	-172440322	-	L1MA6	LINE	L1	-2282	3861	2454	1
chr1	76562589	76562590	chunk0006_435_1	24.9859	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	76562533	76562702	-172393720	-	L3	LINE	CR1	-89	4010	3834	1
chr1	76603310	76603311	chunk0006_440_1	7.37742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	76602813	76603637	-172352785	+	L1ME3E	LINE	L1	5210	6072	-170	1
chr1	76697670	76697671	chunk0006_441_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	76697643	76697971	-172258451	+	L1ME3D	LINE	L1	4943	5267	-879	1
chr1	76752114	76752115	chunk0006_443_1	9.28589	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	76752073	76752244	-172204178	+	Tigger19a	DNA	TcMar-Tigger	136	322	-1	1
chr1	76753184	76753185	chunk0006_444_1	6.58498	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	76753135	76753234	-172203188	+	U6	snRNA	snRNA	2	101	-6	1
chr1	76981506	76981507	chunk0006_451_1	8.27376	AR_DHT_Control	chr1	76981021	76987179	-171969243	+	L1PA6	LINE	L1	178	6326	-1	1
chr1	77051537	77051538	chunk0006_455_1	13.5782	AR_DHT_Control	chr1	77051407	77051641	-171904781	+	MIR	SINE	MIR	16	240	-22	1
chr1	77072068	77072069	chunk0006_456_1	98.9435	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77071557	77072658	-171883764	-	L1ME3F	LINE	L1	-2300	3846	2677	1
chr1	77179753	77179754	chunk0007_6_1	54.0207	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77179746	77179762	-171776660	+	MER57A-int	LTR	ERV1	5796	5809	-378	1
chr1	77196833	77196834	chunk0007_8_1	21.19391	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77195829	77196996	-171759426	-	L1PA16	LINE	L1	-7	6159	4973	1
chr1	77293511	77293512	chunk0007_12_1	27.92189	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	77293449	77293659	-171662763	+	MER58A	DNA	hAT-Charlie	1	223	-1	1
chr1	77333669	77333670	chunk0007_14_1	13.2699	AR_DHT_Control	chr1	77333606	77333801	-171622621	+	MER58A	DNA	hAT-Charlie	1	223	-1	1
chr1	77380481	77380482	chunk0007_17_1	13.8522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	77380475	77380554	-171575868	-	L2a	LINE	L2	-2	3424	3345	1
chr1	77433681	77433682	chunk0007_20_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	77432779	77434107	-171522315	-	MER65-int	LTR	ERV1	-2023	4616	3169	1
chr1	77539184	77539185	chunk0007_24_1	47.18868	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	77538949	77539265	-171417157	-	LTR54	LTR	ERV1	-56	355	3	1
chr1	77611665	77611666	chunk0007_31_1	23.60422	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77607936	77613060	-171343362	+	L1MA9	LINE	L1	2430	7693	-38	1
chr1	77655500	77655501	chunk0007_33_1	6.48643	AR_DHT_Control	chr1	77655427	77655613	-171300809	+	MLT1A0	LTR	ERVL-MaLR	169	365	0	1
chr1	77667455	77667456	chunk0007_34_1	15.26856	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77667263	77667575	-171288847	-	L3	LINE	CR1	-1495	2604	2240	1
chr1	77674398	77674399	chunk0007_36_1	8.1827	AR_DHT_Control	chr1	77674297	77674606	-171281816	+	L1ME3A	LINE	L1	5837	6156	-17	1
chr1	77742374	77742375	chunk0007_40_1	10.3736	AR_DHT_Control	chr1	77742268	77742490	-171213932	-	MER20	DNA	hAT-Charlie	0	219	5	1
chr1	77745533	77745534	chunk0007_41_1	30.9497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77744859	77745606	-171210816	-	L1P1	LINE	L1	-3428	2718	1982	1
chr1	77796809	77796810	chunk0007_49_1	183.3853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	77796586	77797234	-171159188	-	L1MC4a	LINE	L1	-1580	6415	5714	1
chr1	77832511	77832512	chunk0007_50_1	5.37183	AR_DHT_Control	chr1	77832303	77832832	-171123590	-	L2c	LINE	L2	-4	3383	2801	1
chr1	77935043	77935044	chunk0007_55_1	49.62129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	77934965	77935064	-171021358	-	MIR1_Amn	SINE	MIR	-85	145	31	1
chr1	77984119	77984120	chunk0007_57_1	24.1672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	77983998	77984292	-170972130	+	MER57E1	LTR	ERV1	1	314	-58	1
chr1	77998226	77998227	chunk0007_59_1	90.1454	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	77998073	77998255	-170958167	+	L2a	LINE	L2	3206	3425	-1	1
chr1	78194887	78194888	chunk0007_62_1	43.1707	AR_DHT_Control	chr1	78194434	78195063	-170761359	-	L1ME1	LINE	L1	-145	6034	5400	1
chr1	78223583	78223584	chunk0007_64_1	8.40735	AR_DHT_Control	chr1	78223537	78223690	-170732732	-	L2b	LINE	L2	-2	3385	3219	1
chr1	78237782	78237783	chunk0007_67_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	78237724	78237813	-170718609	-	MamTip2	DNA	hAT-Tip100	-48	257	173	1
chr1	78325735	78325736	chunk0007_69_1	12.38802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	78324798	78325862	-170630560	-	ERVL-E-int	LTR	ERVL	-717	4950	3814	1
chr1	78473251	78473252	chunk0007_82_1	25.74236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	78473085	78473339	-170483083	-	MER45B	DNA	hAT-Tip100	-60	980	711	1
chr1	78549650	78549651	chunk0007_89_1	140.28838	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr1	78548415	78549851	-170406571	+	L1PA16	LINE	L1	4125	5531	-635	1
chr1	78591395	78591396	chunk0007_91_1	55.8548	AR_DHT_Control	chr1	78591337	78591437	-170364985	-	L1MC4	LINE	L1	-1481	6561	6460	1
chr1	78627476	78627477	chunk0007_93_1	66.8922	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	78627454	78627638	-170328784	+	MER58A	DNA	hAT-Charlie	39	223	-1	1
chr1	78633425	78633426	chunk0007_94_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	78632964	78634985	-170321437	+	L1M1	LINE	L1	466	3438	-4127	1
chr1	78687667	78687668	chunk0007_95_1	5.32898	AR_DHT_Control	chr1	78687458	78687788	-170268634	-	MER58B	DNA	hAT-Charlie	0	341	1	1
chr1	78867110	78867111	chunk0007_104_1	103.17992	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	78867046	78867628	-170088794	-	MER77B	LTR	ERVL	-57	643	5	1
chr1	78878568	78878569	chunk0007_106_1	14.2024	AR_DHT_Control	chr1	78872619	78880488	-170075934	+	HERVH-int	LTR	ERV1	1	7713	0	1
chr1	78976097	78976098	chunk0007_115_1	15.88154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	78975846	78976386	-169980036	+	L1MEc	LINE	L1	64	628	-5772	1
chr1	78984002	78984003	chunk0007_116_1	86.9155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	78983965	78984077	-169972345	+	L1MEd	LINE	L1	1614	1732	-5354	1
chr1	79018914	79018915	chunk0007_123_1	21.54827	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	79018556	79018983	-169937439	+	LTR105_Mam	LTR	ERVL	1	491	-109	1
chr1	79115892	79115893	chunk0007_124_1	37.27676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79115810	79116192	-169840230	+	L1ME3F	LINE	L1	5683	6071	-172	1
chr1	79133262	79133263	chunk0007_126_1	63.8592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79132742	79133472	-169822950	+	HAL1	LINE	L1	1113	1958	-549	1
chr1	79149651	79149652	chunk0007_128_1	61.7203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79149617	79149773	-169806649	+	UCON2	DNA?	DNA?	373	548	-37	1
chr1	79190773	79190774	chunk0007_132_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	79190612	79191087	-169765335	+	LTR1F	LTR	ERV1	296	772	0	1
chr1	79346861	79346862	chunk0007_142_1	6.73207	AR_DHT_Control	chr1	79346533	79347325	-169609097	-	Tigger3b	DNA	TcMar-Tigger	-389	842	1	1
chr1	79474218	79474219	chunk0007_146_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79474198	79474226	-169482196	+	(AC)n	Simple_repeat	Simple_repeat	1	28	0	1
chr1	79580523	79580524	chunk0007_148_1	6.48643	AR_DHT_Control	chr1	79579944	79582321	-169374101	-	L1MA7	LINE	L1	-12	7698	5306	1
chr1	79637639	79637640	chunk0007_150_1	38.6663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	79637480	79637953	-169318469	-	LTR37B	LTR	ERV1	0	468	1	1
chr1	79716654	79716655	chunk0007_153_1	6.41766	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	79716613	79716677	-169239745	+	L4_C_Mam	LINE	RTE-X	4894	4957	-181	1
chr1	79720779	79720780	chunk0007_155_1	12.72728	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	79720546	79722742	-169233680	+	L1MD1	LINE	L1	2324	4627	-1519	1
chr1	79859731	79859732	chunk0007_158_1	48.2128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	79859468	79859967	-169096455	+	L1MC5	LINE	L1	2541	2987	-4	1
chr1	79875680	79875681	chunk0007_160_1	5.03761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	79875004	79881652	-169074770	+	L1PA15	LINE	L1	8	7490	-670	1
chr1	79893920	79893921	chunk0007_161_1	13.2288	AR_DHT_Control	chr1	79888611	79894731	-169061691	-	L1PA3	LINE	L1	0	6155	4	1
chr1	80251084	80251085	chunk0007_170_1	4.06817	AR_DHT_Control	chr1	80250858	80251202	-168705220	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr1	80594233	80594234	chunk0007_178_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	80593630	80594679	-168361743	+	L1PB1	LINE	L1	2	1058	-5805	1
chr1	80651409	80651410	chunk0007_181_1	44.9864	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	80651093	80651732	-168304690	+	L1MDa	LINE	L1	33	683	-5950	1
chr1	80730341	80730342	chunk0007_184_1	23.8143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	80730189	80730853	-168225569	-	ERVL-E-int	LTR	ERVL	-2513	3154	2472	1
chr1	80731410	80731411	chunk0007_186_1	5.9729	AR_DHT_Control	chr1	80730865	80731477	-168224945	+	L1MA3	LINE	L1	20	631	-6934	1
chr1	80977221	80977222	chunk0007_189_1	63.6822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	80977057	80977223	-167979199	-	L2a	LINE	L2	-2	3424	3266	1
chr1	80988021	80988022	chunk0007_191_1	19.0062	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	80987822	80988026	-167968396	+	MIRc	SINE	MIR	41	261	-7	1
chr1	81005061	81005062	chunk0007_192_1	9.02033	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	81004937	81005385	-167951037	+	LTR16B	LTR	ERVL	2	461	-2	1
chr1	81401156	81401157	chunk0007_203_1	4.51651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	81399313	81401631	-167554791	-	L1MA5	LINE	L1	-4633	3509	987	1
chr1	81414545	81414546	chunk0007_205_1	18.7015	AR_DHT_Control	chr1	81414478	81414686	-167541736	+	AmnSINE1	SINE	5S-Deu-L2	10	221	-354	1
chr1	81523322	81523323	chunk0007_213_1	48.8997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	81523025	81523412	-167433010	+	L1M5	LINE	L1	4388	4780	-1366	1
chr1	81660332	81660333	chunk0007_218_1	20.55168	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	81660311	81660487	-167295935	-	MamSINE1	SINE	tRNA-RTE	-69	221	12	1
chr1	81772732	81772733	chunk0007_226_1	50.786	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	81772446	81772735	-167183687	+	AluSx1	SINE	Alu	1	289	-23	1
chr1	81789689	81789690	chunk0007_229_1	7.19831	AR_DHT_Control	chr1	81789446	81789725	-167166697	+	AluSc	SINE	Alu	2	303	-6	1
chr1	82064907	82064908	chunk0007_233_1	22.33327	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	82064856	82065030	-166891392	+	L2b	LINE	L2	3205	3385	-2	1
chr1	82521255	82521256	chunk0007_243_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	82521255	82521284	-166435138	+	(TTTTC)n	Simple_repeat	Simple_repeat	1	29	0	1
chr1	82685746	82685747	chunk0007_250_1	8.73763	AR_DHT_Control	chr1	82685335	82686528	-166269894	+	Tigger2	DNA	TcMar-Tigger	1	1252	-1466	1
chr1	82687075	82687076	chunk0007_251_1	11.55	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	82686843	82688214	-166268208	+	Tigger2	DNA	TcMar-Tigger	1253	2617	-101	1
chr1	82784996	82784997	chunk0007_253_1	4.36845	AR_DHT_Control	chr1	82784847	82785073	-166171349	+	MIR	SINE	MIR	21	258	-4	1
chr1	82850439	82850440	chunk0007_256_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	82850306	82850496	-166105926	-	LTR33	LTR	ERVL	-316	199	5	1
chr1	82997598	82997599	chunk0007_259_1	154.53407	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	82997258	82997756	-165958666	+	MLT1H	LTR	ERVL-MaLR	29	542	-37	1
chr1	83086451	83086452	chunk0007_265_1	89.87371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	83086360	83086499	-165869923	+	LTR40a	LTR	ERVL	4	150	-369	1
chr1	83154628	83154629	chunk0007_267_1	12.1886	AR_DHT_Control	chr1	83154545	83154883	-165801539	-	OldhAT1	DNA	hAT-Ac	-882	1966	1577	1
chr1	83715263	83715264	chunk0007_277_1	11.5247	AR_DHT_Control	chr1	83715097	83715326	-165241096	+	MIRb	SINE	MIR	22	256	-12	1
chr1	83891669	83891670	chunk0007_285_1	78.9584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	83890776	83891834	-165064588	+	L1ME3F	LINE	L1	4798	5919	-324	1
chr1	84020436	84020437	chunk0007_293_1	7.27655	AR_DHT_Control	chr1	84020235	84020681	-164935741	+	MER101B	LTR	ERV1	4	503	-67	1
chr1	84132504	84132505	chunk0007_294_1	10.9705	AR_DHT_Control	chr1	84131532	84133511	-164822911	+	L1MC3	LINE	L1	1	2209	-4451	1
chr1	84150650	84150651	chunk0007_298_1	7.33982	AR_DHT_Control	chr1	84150432	84150835	-164805587	+	MSTB	LTR	ERVL-MaLR	14	421	-5	1
chr1	84187929	84187930	chunk0007_302_1	12.02733	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	84187207	84189558	-164766864	-	MER101-int	LTR	ERV1	-1057	4889	2755	1
chr1	84225648	84225649	chunk0007_303_1	7.3267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	84223668	84225982	-164730440	-	L1MA4A	LINE	L1	-4939	2627	378	1
chr1	84247477	84247478	chunk0007_304_1	9.96971	AR_DHT_Control	chr1	84247327	84247953	-164708469	+	MLT1G	LTR	ERVL-MaLR	1	591	0	1
chr1	84332526	84332527	chunk0007_311_1	16.5172	AR_DHT_Control	chr1	84331735	84336296	-164620126	-	L1PA15	LINE	L1	-7	6778	2025	1
chr1	84493062	84493063	chunk0007_321_1	18.701	AR_DHT_Control	chr1	84492939	84493080	-164463342	+	MIRb	SINE	MIR	97	240	-28	1
chr1	84510929	84510930	chunk0007_322_1	18.34354	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	84510182	84511302	-164445120	+	L1MA3	LINE	L1	5165	6305	0	1
chr1	84541754	84541755	chunk0007_324_1	42.8694	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	84540965	84541950	-164414472	-	L1MC4	LINE	L1	-4578	1637	628	1
chr1	84573959	84573960	chunk0007_326_1	9.28589	AR_DHT_Control	chr1	84573947	84574100	-164382322	+	MIRb	SINE	MIR	1	154	-114	1
chr1	84611926	84611927	chunk0007_327_1	16.9335	AR_DHT_Control	chr1	84611678	84612228	-164344194	+	LTR19C	LTR	ERV1	1	554	-225	1
chr1	84709914	84709915	chunk0007_332_1	140.46835	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	84708591	84710131	-164246291	+	FordPrefect	DNA	hAT-Tip100	80	1652	-31	1
chr1	84779271	84779272	chunk0007_337_1	7.09275	AR_DHT_Control	chr1	84779149	84779388	-164177034	-	L2a	LINE	L2	-124	3302	3044	1
chr1	84805567	84805568	chunk0007_338_1	11.10966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	84805515	84805713	-164150709	-	L1ME4c	LINE	L1	-281	549	350	1
chr1	84835300	84835301	chunk0007_345_1	35.9721	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	84834745	84835956	-164120466	-	L3	LINE	CR1	0	4099	2879	1
chr1	84839767	84839768	chunk0007_346_1	69.2693	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	84839721	84839915	-164116507	+	MIR	SINE	MIR	2	232	-30	1
chr1	84844048	84844049	chunk0007_347_1	71.34711	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	84843787	84844172	-164112250	+	L2a	LINE	L2	3000	3426	0	1
chr1	84858787	84858788	chunk0007_350_1	55.80371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	84858726	84859083	-164097339	-	L2c	LINE	L2	-33	3354	2947	1
chr1	84936966	84936967	chunk0007_359_1	55.14683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	84936899	84937009	-164019413	+	MIRb	SINE	MIR	145	268	0	1
chr1	84947666	84947667	chunk0007_364_1	7.78444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	84947239	84947983	-164008439	+	L1M2	LINE	L1	393	1412	-6154	1
chr1	85355803	85355804	chunk0007_386_1	14.28006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	85355618	85356223	-163600199	+	L1ME3D	LINE	L1	5611	6242	0	1
chr1	85423851	85423852	chunk0007_391_1	33.8098	AR_DHT_Control	chr1	85423042	85424366	-163532056	-	L1MC3	LINE	L1	-1266	4880	3492	1
chr1	85504461	85504462	chunk0007_400_1	15.94008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	85504360	85504518	-163451904	-	MamGypsy2-LTR	LTR	Gypsy	-5	178	22	1
chr1	85544001	85544002	chunk0007_404_1	15.39675	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	85543645	85544110	-163412312	+	Tigger8	DNA	TcMar-Tigger	172	667	0	1
chr1	85551577	85551578	chunk0007_406_1	14.20179	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	85551537	85551929	-163404493	-	L2b	LINE	L2	-1	3386	2979	1
chr1	85808279	85808280	chunk0007_409_1	13.1346	AR_DHT_Control	chr1	85807114	85808723	-163147699	+	ERVL-E-int	LTR	ERVL	1032	2790	-2877	1
chr1	85934707	85934708	chunk0007_412_1	66.5239	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	85934655	85934849	-163021573	+	MER58A	DNA	hAT-Charlie	1	208	-16	1
chr1	86105199	86105200	chunk0007_414_1	94.7612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	86101245	86106065	-162850357	-	L1PA13	LINE	L1	-1854	4912	3	1
chr1	86281578	86281579	chunk0007_421_1	6.6833	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	86280522	86282644	-162673778	+	ERVL-B4-int	LTR	ERVL	3541	5714	0	1
chr1	86537291	86537292	chunk0007_425_1	6.6468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	86535132	86537604	-162418818	-	L1MC1	LINE	L1	-3818	2503	2	1
chr1	86596356	86596357	chunk0007_428_1	12.2633	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	86596306	86596764	-162359658	+	MER4C	LTR	ERV1	14	464	-1	1
chr1	86865587	86865588	chunk0007_439_1	19.05625	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	86865252	86865912	-162090510	+	L1MB2	LINE	L1	5100	5793	-378	1
chr1	86869176	86869177	chunk0007_440_1	7.71764	AR_DHT_Control	chr1	86868902	86869260	-162087162	+	L1M5	LINE	L1	5255	5665	-459	1
chr1	86960864	86960865	chunk0007_448_1	45.2811	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	86959671	86961124	-161995298	+	L1MC2	LINE	L1	4289	5849	-495	1
chr1	86971117	86971118	chunk0007_449_1	26.82614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	86971084	86971175	-161985247	-	L2c	LINE	L2	-1	3386	3301	1
chr1	87018143	87018144	chunk0008_2_1	43.1464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	87018132	87018180	-161938242	+	(CA)n	Simple_repeat	Simple_repeat	1	48	0	1
chr1	87106968	87106969	chunk0008_5_1	29.63461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	87106909	87107114	-161849308	-	MER58A	DNA	hAT-Charlie	0	224	20	1
chr1	87372833	87372834	chunk0008_12_1	7.67158	AR_DHT_Control	chr1	87372761	87372855	-161583567	+	MLT1O	LTR	ERVL-MaLR	104	190	-352	1
chr1	87399817	87399818	chunk0008_15_1	7.42871	AR_DHT_Control	chr1	87399686	87399825	-161556597	-	L2c	LINE	L2	0	3387	3253	1
chr1	87844401	87844402	chunk0008_24_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	87844127	87844460	-161111962	-	MSTD	LTR	ERVL-MaLR	0	396	42	1
chr1	87866512	87866513	chunk0008_25_1	6.44773	AR_DHT_Control	chr1	87866070	87866540	-161089882	-	MLT2B2	LTR	ERVL	-48	467	1	1
chr1	88678648	88678649	chunk0008_32_1	18.2864	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	88678632	88678657	-160277765	+	(AC)n	Simple_repeat	Simple_repeat	1	25	0	1
chr1	88683912	88683913	chunk0008_33_1	5.95444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	88683884	88683929	-160272493	+	A-rich	Low_complexity	Low_complexity	1	45	0	1
chr1	88737089	88737090	chunk0008_34_1	8.35541	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	88736999	88738046	-160218376	-	L1M1	LINE	L1	-6228	1337	468	1
chr1	88947570	88947571	chunk0008_41_1	8.27376	AR_DHT_Control	chr1	88946915	88947724	-160008698	+	MER54A	LTR	ERVL	1	901	0	1
chr1	88980106	88980107	chunk0008_42_1	72.93794	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	88979422	88980324	-159976098	+	L1ME2	LINE	L1	5207	6332	-2	1
chr1	88994182	88994183	chunk0008_44_1	5.07296	AR_DHT_Control	chr1	88993941	88994245	-159962177	-	MER90	LTR	ERV1	-269	306	1	1
chr1	89166914	89166915	chunk0008_46_1	14.84969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	89166902	89167120	-159789302	+	MER65A	LTR	ERV1	261	473	0	1
chr1	89169449	89169450	chunk0008_48_1	13.5469	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	89169329	89170059	-159786363	+	MER65-int	LTR	ERV1	3452	4173	-698	1
chr1	89222976	89222977	chunk0008_49_1	7.74912	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	89222131	89224114	-159732308	+	L1PA14	LINE	L1	2177	4183	-2490	1
chr1	89249085	89249086	chunk0008_50_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	89248278	89253817	-159702605	+	L1MA2	LINE	L1	547	6216	-1349	1
chr1	89255123	89255124	chunk0008_52_1	23.885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	89254134	89255646	-159700776	+	L1MA2	LINE	L1	6217	7723	0	1
chr1	89308585	89308586	chunk0008_53_1	21.75922	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	89308576	89308927	-159647495	-	L1ME3A	LINE	L1	-27	6146	5785	1
chr1	89446900	89446901	chunk0008_57_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	89444441	89447937	-159508485	-	L1M1	LINE	L1	-3938	3627	5	1
chr1	89458675	89458676	chunk0008_58_1	24.3709	AR_DHT_Control	chr1	89458606	89458834	-159497588	+	L1MA10	LINE	L1	6102	6333	-1	1
chr1	89484973	89484974	chunk0008_59_1	5.83706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	89484571	89485071	-159471351	+	MLT1F2	LTR	ERVL-MaLR	1	555	0	1
chr1	89489481	89489482	chunk0008_60_1	4.71246	AR_DHT_Control	chr1	89488618	89490445	-159465977	+	L1M1	LINE	L1	17	1846	-5719	1
chr1	89545490	89545491	chunk0008_61_1	6.84874	AR_DHT_Control	chr1	89545294	89545507	-159410915	-	MIRc	SINE	MIR	-28	240	2	1
chr1	89624199	89624200	chunk0008_66_1	72.4082	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	89623873	89624364	-159332058	-	LTR40a	LTR	ERVL	0	519	1	1
chr1	89727427	89727428	chunk0008_69_1	16.07688	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	89727341	89727488	-159228934	-	L2b	LINE	L2	-5	3370	3219	1
chr1	89852581	89852582	chunk0008_72_1	7.3092	AR_DHT_Control	chr1	89852481	89852879	-159103543	-	L2b	LINE	L2	-29	3346	2959	1
chr1	89929716	89929717	chunk0008_78_1	13.7286	AR_DHT_Control	chr1	89929614	89929804	-159026618	-	Tigger3d	DNA	TcMar-Tigger	0	321	136	1
chr1	89992151	89992152	chunk0008_82_1	5.56714	AR_DHT_Control	chr1	89991882	89992269	-158964153	+	MER47B	DNA	TcMar-Tigger	2	418	0	1
chr1	90883422	90883423	chunk0008_90_1	21.60175	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	90882032	90883440	-158072982	+	MLT1G1-int	LTR	ERVL-MaLR	7	1470	-19	1
chr1	91005415	91005416	chunk0008_96_1	18.36057	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	91003685	91006258	-157950164	+	L1M4	LINE	L1	1069	4025	-2619	1
chr1	91016378	91016379	chunk0008_99_1	70.0405	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	91016274	91016624	-157939798	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr1	91253603	91253604	chunk0008_102_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	91252942	91255672	-157700750	+	L1PREC2	LINE	L1	2	4183	-3972	1
chr1	91268396	91268397	chunk0008_104_1	45.1988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	91268395	91268553	-157687869	+	MIR	SINE	MIR	17	190	-72	1
chr1	91338570	91338571	chunk0008_105_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	91337868	91340017	-157616405	+	L1PA14	LINE	L1	193	2362	-4327	1
chr1	91430040	91430041	chunk0008_107_1	5.59693	AR_DHT_Control	chr1	91429849	91430292	-157526130	+	MLT1D	LTR	ERVL-MaLR	5	504	-1	1
chr1	91431889	91431890	chunk0008_108_1	12.4153	AR_DHT_Control	chr1	91431554	91431994	-157524428	+	L2c	LINE	L2	2950	3383	-4	1
chr1	91537887	91537888	chunk0008_112_1	7.36432	AR_DHT_Control	chr1	91537843	91538004	-157418418	-	OldhAT1	DNA	hAT-Ac	-1247	1601	1401	1
chr1	92006082	92006083	chunk0008_137_1	4.40478	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92005974	92006251	-156950171	-	L1MEc	LINE	L1	-3238	3081	2785	1
chr1	92120649	92120650	chunk0008_143_1	8.46955	AR_DHT_Control	chr1	92120191	92120766	-156835656	-	Tigger3b	DNA	TcMar-Tigger	-636	595	4	1
chr1	92289479	92289480	chunk0008_146_1	22.87134	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92289428	92289502	-156666920	+	MIRc	SINE	MIR	179	266	-2	1
chr1	92315666	92315667	chunk0008_148_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92315645	92315730	-156640692	+	X7A_LINE	LINE	CR1	121	221	-46	1
chr1	92324953	92324954	chunk0008_149_1	5.37222	AR_DHT_Control	chr1	92324862	92325091	-156631331	+	MIRb	SINE	MIR	20	264	-4	1
chr1	92363324	92363325	chunk0008_150_1	18.2513	AR_DHT_Control	chr1	92363149	92363577	-156592845	-	L2b	LINE	L2	-1498	1921	1434	1
chr1	92494743	92494744	chunk0008_156_1	6.48643	AR_DHT_Control	chr1	92494717	92494800	-156461622	-	L2c	LINE	L2	-10	3377	3299	1
chr1	92608854	92608855	chunk0008_158_1	18.7412	AR_DHT_Control	chr1	92608812	92609027	-156347395	+	MIRb	SINE	MIR	29	268	0	1
chr1	92653740	92653741	chunk0008_159_1	7.74912	AR_DHT_Control	chr1	92652715	92655559	-156300863	+	L1PB4	LINE	L1	284	2768	-4085	1
chr1	92718382	92718383	chunk0008_160_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92715488	92721678	-156234744	+	L1PA6	LINE	L1	3	6143	-11	1
chr1	92849050	92849051	chunk0008_169_1	40.6705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	92848981	92849104	-156107318	-	L1M	LINE	L1	-2453	5429	5304	1
chr1	92915795	92915796	chunk0008_175_1	32.29494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92915647	92916272	-156040150	+	L1MB7	LINE	L1	5521	6175	-9	1
chr1	92985097	92985098	chunk0008_178_1	10.7069	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	92984693	92985673	-155970749	-	L1ME1	LINE	L1	-1	6351	5313	1
chr1	93098042	93098043	chunk0008_182_1	9.87004	AR_DHT_Control	chr1	93097964	93098064	-155858358	-	L2c	LINE	L2	-1	3425	3312	1
chr1	93171827	93171828	chunk0008_186_1	49.561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	93171415	93172526	-155783896	+	L1MEd	LINE	L1	3521	4626	-1695	1
chr1	93250553	93250554	chunk0008_191_1	53.9153	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	93250411	93251994	-155704428	-	L1M1	LINE	L1	-3451	4111	2423	1
chr1	93324737	93324738	chunk0008_194_1	28.7433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	93324562	93324774	-155631648	+	L2a	LINE	L2	3186	3425	-1	1
chr1	93715078	93715079	chunk0008_214_1	10.0392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	93715051	93715099	-155241323	-	L2a	LINE	L2	-3	3423	3375	1
chr1	93804803	93804804	chunk0008_217_1	76.2011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	93804777	93804983	-155151439	-	L1M5	LINE	L1	-400	5779	5583	1
chr1	93899551	93899552	chunk0008_220_1	66.4523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	93899388	93899822	-155056600	-	L1ME4c	LINE	L1	-261	569	122	1
chr1	93908497	93908498	chunk0008_221_1	10.5437	AR_DHT_Control	chr1	93908475	93908555	-155047867	-	L1MA4A	LINE	L1	-59	6241	6172	1
chr1	93916069	93916070	chunk0008_222_1	16.4778	AR_DHT_Control	chr1	93910736	93916776	-155039646	-	L1PA6	LINE	L1	-3	6151	9	1
chr1	93945049	93945050	chunk0008_223_1	10.1791	AR_DHT_Control	chr1	93944471	93945169	-155011253	-	L1MA6	LINE	L1	-3	6297	5608	1
chr1	93983985	93983986	chunk0008_225_1	26.27788	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	93983794	93984321	-154972101	+	MER68B	LTR	ERVL	3	537	-27	1
chr1	94004425	94004426	chunk0008_226_1	20.37101	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94003937	94005227	-154951195	-	L1MC4a	LINE	L1	-979	6903	5583	1
chr1	94022623	94022624	chunk0008_228_1	18.539	AR_DHT_Control	chr1	94022521	94022680	-154933742	+	L2	LINE	L2	2726	2888	-531	1
chr1	94035016	94035017	chunk0008_230_1	36.68274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	94034848	94035103	-154921319	-	MIR	SINE	MIR	-5	263	1	1
chr1	94176591	94176592	chunk0008_235_1	45.6384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94176412	94176610	-154779812	+	MIRb	SINE	MIR	50	265	-3	1
chr1	94222027	94222028	chunk0008_237_1	36.54683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	94221671	94222881	-154733541	+	L1MC3	LINE	L1	6609	7784	-1	1
chr1	94237012	94237013	chunk0008_240_1	8.65676	AR_DHT_Control	chr1	94236909	94237116	-154719306	+	MIR	SINE	MIR	10	241	-21	1
chr1	94321919	94321920	chunk0008_243_1	37.8863	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94321773	94321925	-154634497	+	L2b	LINE	L2	3207	3375	0	1
chr1	94408203	94408204	chunk0008_248_1	13.4656	AR_DHT_Control	chr1	94408072	94408248	-154548174	-	L2c	LINE	L2	-80	3307	3110	1
chr1	94415544	94415545	chunk0008_249_1	16.8533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94415491	94415967	-154540455	+	LTR65	LTR	ERV1	167	663	-6	1
chr1	94423051	94423052	chunk0008_250_1	5.67327	AR_DHT_Control	chr1	94422974	94423231	-154533191	+	L2b	LINE	L2	2910	3164	-211	1
chr1	94426000	94426001	chunk0008_251_1	7.29426	AR_DHT_Control	chr1	94425831	94426053	-154530369	+	MIRb	SINE	MIR	5	262	-6	1
chr1	94487395	94487396	chunk0008_253_1	12.72711	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	94487333	94487434	-154468988	-	L2a	LINE	L2	-9	3417	3320	1
chr1	94490651	94490652	chunk0008_254_1	17.0078	AR_DHT_Control	chr1	94490098	94491149	-154465273	-	L1MA9	LINE	L1	-16	6296	5263	1
chr1	94543573	94543574	chunk0008_259_1	13.10465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94543487	94543683	-154412739	+	MamRTE1	LINE	RTE-BovB	2071	2282	-1530	1
chr1	94595974	94595975	chunk0008_266_1	56.435	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	94595937	94596169	-154360253	-	LTR78	LTR	ERV1	-5	1299	1074	1
chr1	94639351	94639352	chunk0008_267_1	16.84799	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94638768	94639464	-154316958	+	L1ME3A	LINE	L1	5416	6160	-13	1
chr1	94646610	94646611	chunk0008_269_1	5.98896	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	94646461	94646617	-154309805	-	L2c	LINE	L2	0	3375	3246	1
chr1	94663944	94663945	chunk0008_270_1	8.27423	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94663666	94664766	-154291656	-	MER4-int	LTR	ERV1	-1538	5060	3942	1
chr1	94676957	94676958	chunk0008_271_1	18.2172	AR_DHT_Control	chr1	94676939	94677044	-154279378	-	MER91A	DNA	hAT-Tip100	-31	165	53	1
chr1	94707349	94707350	chunk0008_272_1	30.5885	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94706956	94707429	-154248993	+	Charlie15b	DNA	hAT-Charlie	544	1026	-35	1
chr1	94738717	94738718	chunk0008_274_1	6.7814	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	94737944	94738786	-154217636	-	L1PA16	LINE	L1	-1	6165	5294	1
chr1	94779089	94779090	chunk0008_281_1	22.31901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	94779078	94779167	-154177255	+	L2b	LINE	L2	3287	3375	0	1
chr1	95042317	95042318	chunk0008_304_1	51.36086	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	95042305	95042336	-153914086	+	(AC)n	Simple_repeat	Simple_repeat	1	31	0	1
chr1	95053941	95053942	chunk0008_305_1	18.0107	AR_DHT_Control	chr1	95053724	95053966	-153902456	+	L1MEd	LINE	L1	2550	2803	-3343	1
chr1	95133828	95133829	chunk0008_310_1	19.5138	AR_DHT_Control	chr1	95133395	95134610	-153821812	-	L2b	LINE	L2	-1671	1748	336	1
chr1	95138585	95138586	chunk0008_311_1	10.6202	AR_DHT_Control	chr1	95138433	95138905	-153817517	-	Tigger3b	DNA	TcMar-Tigger	0	1231	946	1
chr1	95172164	95172165	chunk0008_312_1	19.42472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	95171780	95172216	-153784206	+	MLT1C	LTR	ERVL-MaLR	1	467	0	1
chr1	95179408	95179409	chunk0008_314_1	4.83532	AR_DHT_Control	chr1	95179330	95179547	-153776875	+	MER58A	DNA	hAT-Charlie	5	224	0	1
chr1	95189594	95189595	chunk0008_315_1	5.6425	AR_DHT_Control	chr1	95188441	95190092	-153766330	-	L1MC3	LINE	L1	-625	7160	5428	1
chr1	95204748	95204749	chunk0008_316_1	8.14633	AR_DHT_Control	chr1	95204434	95204979	-153751443	-	L2a	LINE	L2	-15	3411	2813	1
chr1	95406304	95406305	chunk0008_330_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	95405859	95406559	-153549863	-	MER50	LTR	ERV1	-23	711	1	1
chr1	95541068	95541069	chunk0008_332_1	20.0638	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	95540632	95541334	-153415088	+	L1MA9	LINE	L1	5621	6312	0	1
chr1	95575487	95575488	chunk0008_335_1	76.8063	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	95575056	95575531	-153380891	-	LTR33B	LTR	ERVL	-307	488	1	1
chr1	96001001	96001002	chunk0008_345_1	10.6722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	96000000	96001545	-152954877	+	L1MC	LINE	L1	4090	5629	-715	1
chr1	96029045	96029046	chunk0008_347_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	96028017	96029468	-152926954	-	MER52A	LTR	ERV1	0	1755	1	1
chr1	96263791	96263792	chunk0008_353_1	28.70902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	96263720	96263864	-152692558	+	L1M5	LINE	L1	4602	4747	-1399	1
chr1	96298729	96298730	chunk0008_354_1	8.2753	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	96298586	96298771	-152657651	+	L1M4	LINE	L1	5204	5403	-743	1
chr1	96628515	96628516	chunk0008_360_1	8.35541	AR_DHT_Control	chr1	96628213	96628601	-152327821	-	MLT2B1	LTR	ERVL	-64	456	1	1
chr1	96677186	96677187	chunk0008_362_1	7.36432	AR_DHT_Control	chr1	96675405	96677698	-152278724	-	L1MC1	LINE	L1	-4147	2361	1	1
chr1	96684173	96684174	chunk0008_363_1	6.48643	AR_DHT_Control	chr1	96684094	96684558	-152271864	-	L1MD3	LINE	L1	-17	7978	7528	1
chr1	96703603	96703604	chunk0008_365_1	25.07742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	96703524	96703636	-152252786	+	MamSINE1	SINE	tRNA-RTE	160	290	0	1
chr1	96772717	96772718	chunk0008_369_1	70.3472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	96772463	96772718	-152183704	-	L1MA7	LINE	L1	-186	6105	5860	1
chr1	96827264	96827265	chunk0008_373_1	9.19836	AR_DHT_Control	chr1	96827245	96827818	-152128604	+	L2	LINE	L2	264	887	-2532	1
chr1	96863675	96863676	chunk0008_375_1	23.0092	AR_DHT_Control	chr1	96859363	96863817	-152092605	-	L1MA4A	LINE	L1	-2934	4628	358	1
chr1	96931253	96931254	chunk0008_378_1	20.60425	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	96931177	96931272	-152025150	-	MER67C	LTR	ERV1	-614	97	3	1
chr1	97048870	97048871	chunk0008_383_1	4.36845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97048524	97048981	-151907441	+	L2b	LINE	L2	2959	3415	-11	1
chr1	97145763	97145764	chunk0008_384_1	8.41215	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97145743	97145785	-151810637	+	(T)n	Simple_repeat	Simple_repeat	1	42	0	1
chr1	97184789	97184790	chunk0008_390_1	21.70524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97184581	97185108	-151771314	-	L1M5	LINE	L1	-1687	4459	3905	1
chr1	97239934	97239935	chunk0008_392_1	9.90105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97239724	97239935	-151716487	+	MIR	SINE	MIR	33	261	-1	1
chr1	97356357	97356358	chunk0008_396_1	12.2728	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97355253	97357501	-151598921	-	L1MA7	LINE	L1	0	6291	4125	1
chr1	97474146	97474147	chunk0008_399_1	12.6499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	97474042	97474147	-151482275	+	L1M2	LINE	L1	5583	5667	-645	1
chr1	98344638	98344639	chunk0008_413_1	188.03571	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	98344517	98344712	-150611710	-	MER127	DNA	TcMar-Tigger	-79	285	79	1
chr1	98427974	98427975	chunk0008_417_1	5.44741	AR_DHT_Control	chr1	98427617	98428097	-150528325	-	MLT1I-int	LTR	ERVL-MaLR	-866	543	42	1
chr1	98875022	98875023	chunk0008_424_1	13.1572	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	98875000	98875164	-150081258	-	L1MC3	LINE	L1	-961	6824	6670	1
chr1	99122379	99122380	chunk0008_425_1	7.74912	AR_DHT_Control	chr1	99122165	99122578	-149833844	+	LTR23	LTR	ERV1	1	437	0	1
chr1	99345711	99345712	chunk0008_428_1	5.03921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	99345674	99345904	-149610518	-	MIRb	SINE	MIR	-17	251	11	1
chr1	99424268	99424269	chunk0008_431_1	68.54438	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	99424246	99424481	-149531941	-	MIRc	SINE	MIR	-16	252	3	1
chr1	99447072	99447073	chunk0008_433_1	8.27376	AR_DHT_Control	chr1	99446891	99447503	-149508919	+	L1ME1	LINE	L1	5530	6124	-55	1
chr1	99685711	99685712	chunk0008_449_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	99685615	99685784	-149270638	+	MamRTE1	LINE	RTE-BovB	2159	2359	-1453	1
chr1	99745291	99745292	chunk0008_453_1	40.89269	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	99745008	99745402	-149211020	+	Tigger2	DNA	TcMar-Tigger	1134	1522	-1196	1
chr1	99754883	99754884	chunk0008_455_1	8.79298	AR_DHT_Control	chr1	99754818	99754887	-149201535	+	L1M6	LINE	L1	679	747	-5749	1
chr1	99807083	99807084	chunk0009_2_1	145.8467	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	99806876	99807290	-149149132	-	MER47B	DNA	TcMar-Tigger	0	418	1	1
chr1	99821760	99821761	chunk0009_4_1	5.59431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	99821620	99821826	-149134596	-	L1M5	LINE	L1	-3518	2628	2404	1
chr1	99836137	99836138	chunk0009_5_1	11.5684	AR_DHT_Control	chr1	99835833	99836768	-149119654	-	LTR5_Hs	LTR	ERVK	0	968	1	1
chr1	100000759	100000760	chunk0009_14_1	45.9597	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	100000743	100002612	-148953810	-	L1M2	LINE	L1	-1049	6513	4557	1
chr1	100006484	100006485	chunk0009_16_1	4.83532	AR_DHT_Control	chr1	100005056	100006760	-148949662	-	L1M2	LINE	L1	-4330	3236	1502	1
chr1	100109577	100109578	chunk0009_21_1	7.14391	AR_DHT_Control	chr1	100109486	100109607	-148846815	+	L1PA10	LINE	L1	6045	6168	0	1
chr1	100202935	100202936	chunk0009_24_1	27.1435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	100199602	100206088	-148750334	+	L1PA7	LINE	L1	8	6469	0	1
chr1	100239254	100239255	chunk0009_26_1	27.4185	AR_DHT_Control	chr1	100239169	100239286	-148717136	-	MIR	SINE	MIR	-77	185	39	1
chr1	100252895	100252896	chunk0009_31_1	39.511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	100252663	100253026	-148703396	-	L1ME3F	LINE	L1	-116	6126	5654	1
chr1	100449657	100449658	chunk0009_41_1	12.5172	AR_DHT_Control	chr1	100449614	100449791	-148506631	+	L2c	LINE	L2	3218	3386	-1	1
chr1	100474549	100474550	chunk0009_46_1	11.6759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	100473687	100474856	-148481566	-	L1MDa	LINE	L1	-1825	4712	3491	1
chr1	100493391	100493392	chunk0009_50_1	21.43606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	100493153	100493473	-148462949	-	LTR86B2	LTR	ERVL	-130	357	1	1
chr1	100570742	100570743	chunk0009_54_1	12.1095	AR_DHT_Control	chr1	100570172	100571289	-148385133	+	L1PREC2	LINE	L1	2827	3931	-2215	1
chr1	100603661	100603662	chunk0009_55_1	21.6566	AR_DHT_Control	chr1	100598238	100604384	-148352038	-	L1PA5	LINE	L1	0	6154	6	1
chr1	100629647	100629648	chunk0009_56_1	13.28775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	100629627	100629784	-148326638	-	MLT1I	LTR	ERVL-MaLR	-16	395	231	1
chr1	100727140	100727141	chunk0009_60_1	14.6324	AR_DHT_Control	chr1	100727079	100727150	-148229272	+	L2c	LINE	L2	3312	3387	0	1
chr1	100769787	100769788	chunk0009_61_1	6.58746	AR_DHT_Control	chr1	100769562	100769910	-148186512	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr1	100804627	100804628	chunk0009_62_1	12.7844	AR_DHT_Control	chr1	100804581	100804639	-148151783	+	GA-rich	Low_complexity	Low_complexity	1	56	0	1
chr1	100916819	100916820	chunk0009_72_1	160.55757	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	100916484	100916877	-148039545	-	L1MA1	LINE	L1	-21	6281	5892	1
chr1	100947174	100947175	chunk0009_74_1	87.5334	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	100944683	100950115	-148006307	-	L1PA6	LINE	L1	-375	5952	210	1
chr1	101156322	101156323	chunk0009_84_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	101156305	101156442	-147799980	-	MLT1J2	LTR	ERVL-MaLR	-301	147	1	1
chr1	101157259	101157260	chunk0009_85_1	4.39832	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	101157166	101157447	-147798975	+	L1ME4a	LINE	L1	5115	5395	-751	1
chr1	101220588	101220589	chunk0009_87_1	8.85743	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	101220484	101220752	-147735670	+	L2a	LINE	L2	3130	3426	0	1
chr1	101224025	101224026	chunk0009_88_1	22.17166	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	101223817	101224249	-147732173	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	1
chr1	102238822	102238823	chunk0009_102_1	35.82079	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	102238613	102238892	-146717530	+	L1ME3A	LINE	L1	5850	6146	-27	1
chr1	102556688	102556689	chunk0009_105_1	15.3744	AR_DHT_Control	chr1	102556525	102556780	-146399642	-	L2a	LINE	L2	-1635	1784	1520	1
chr1	102588675	102588676	chunk0009_107_1	14.1296	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	102588529	102588839	-146367583	-	MLT1B	LTR	ERVL-MaLR	0	390	100	1
chr1	102614186	102614187	chunk0009_110_1	8.24382	AR_DHT_Control	chr1	102614059	102614906	-146341516	+	L1P4a	LINE	L1	213	1059	-5444	1
chr1	102724963	102724964	chunk0009_111_1	143.6297	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	102724932	102724967	-146231455	+	(A)n	Simple_repeat	Simple_repeat	1	35	0	1
chr1	102743525	102743526	chunk0009_113_1	33.7789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	102743131	102743856	-146212566	+	L1ME1	LINE	L1	5223	6002	-177	1
chr1	102840297	102840298	chunk0009_118_1	20.36039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	102837115	102840789	-146115633	+	HERVK3-int	LTR	ERVK	3495	7200	-2	1
chr1	103300442	103300443	chunk0009_124_1	9.44294	AR_DHT_Control	chr1	103300339	103300574	-145655848	-	Tigger3a	DNA	TcMar-Tigger	-8	340	113	1
chr1	103445939	103445940	chunk0009_127_1	26.1717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	103445350	103446739	-145509683	+	L1PA11	LINE	L1	4777	6166	-8	1
chr1	103953895	103953896	chunk0009_129_1	9.83377	AR_DHT_Control	chr1	103953400	103957369	-144999053	-	L1MC1	LINE	L1	-16	6317	2240	1
chr1	104472673	104472674	chunk0009_133_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	104470861	104473858	-144482564	+	ERVL-B4-int	LTR	ERVL	2434	5468	-186	1
chr1	104541727	104541728	chunk0009_135_1	73.1269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	104541676	104541815	-144414607	+	L2a	LINE	L2	1334	1482	-1937	1
chr1	104677635	104677636	chunk0009_141_1	26.6562	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	104677561	104677791	-144278631	+	MIRb	SINE	MIR	18	261	-1	1
chr1	104807669	104807670	chunk0009_143_1	52.8255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	104807576	104807988	-144148434	+	L1M4a2	LINE	L1	458	875	-1781	1
chr1	104911454	104911455	chunk0009_147_1	9.21264	AR_DHT_Control	chr1	104911167	104911677	-144044745	-	LTR10A	LTR	ERV1	-99	510	1	1
chr1	104933389	104933390	chunk0009_149_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	104932929	104934204	-144022218	+	LTR2752	LTR	ERV1	5	1263	0	1
chr1	104934023	104934024	chunk0009_150_1	16.6943	AR_DHT_Control	chr1	104932929	104934204	-144022218	+	LTR2752	LTR	ERV1	5	1263	0	1
chr1	104947302	104947303	chunk0009_151_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	104947026	104947665	-144008757	+	THE1D-int	LTR	ERVL-MaLR	538	1200	-431	1
chr1	104991757	104991758	chunk0009_155_1	60.1883	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	104991438	104992790	-143963632	+	Tigger2	DNA	TcMar-Tigger	38	1416	-1302	1
chr1	105005428	105005429	chunk0009_156_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	105004492	105006236	-143950186	-	MER52A	LTR	ERV1	0	1755	1	1
chr1	105018815	105018816	chunk0009_157_1	8.27376	AR_DHT_Control	chr1	105018761	105019838	-143936584	-	L1P3	LINE	L1	-684	5490	4382	1
chr1	105025845	105025846	chunk0009_159_1	21.29941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	105024711	105026386	-143930036	+	L1MEc	LINE	L1	44	1842	-4558	1
chr1	105138235	105138236	chunk0009_160_1	4.44156	AR_DHT_Control	chr1	105137819	105138492	-143817930	-	HERVL18-int	LTR	ERVL	-5371	676	3	1
chr1	105260254	105260255	chunk0009_161_1	7.86105	AR_DHT_Control	chr1	105259604	105260666	-143695756	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	1	1
chr1	105263990	105263991	chunk0009_162_1	14.7397	AR_DHT_Control	chr1	105263796	105265313	-143691109	-	L1PA7	LINE	L1	-3018	3443	1922	1
chr1	105340933	105340934	chunk0009_166_1	55.3359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	105340751	105341147	-143615275	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	1
chr1	105395163	105395164	chunk0009_167_1	28.14542	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	105392252	105395278	-143561144	-	L1MA2	LINE	L1	-1403	6162	2890	1
chr1	105396219	105396220	chunk0009_170_1	66.53463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	105395304	105396364	-143560058	-	L1MA2	LINE	L1	-4619	2946	1784	1
chr1	105479333	105479334	chunk0009_173_1	5.6425	AR_DHT_Control	chr1	105479104	105479803	-143476619	+	L1MEg	LINE	L1	135	941	-5511	1
chr1	105533497	105533498	chunk0009_175_1	66.6919	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	105532799	105533518	-143422904	-	L1PB2	LINE	L1	-297	5854	5120	1
chr1	105621610	105621611	chunk0009_178_1	14.07255	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	105620946	105623326	-143333096	-	L1M3c	LINE	L1	-3981	3584	1542	1
chr1	105669603	105669604	chunk0009_180_1	31.90346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	105669447	105669711	-143286711	-	L2c	LINE	L2	-326	3061	2783	1
chr1	105695150	105695151	chunk0009_181_1	6.38514	AR_DHT_Control	chr1	105694712	105695415	-143261007	-	L1MEc	LINE	L1	-5420	980	231	1
chr1	105785304	105785305	chunk0009_186_1	6.48643	AR_DHT_Control	chr1	105784959	105785392	-143171030	+	MLT1D	LTR	ERVL-MaLR	1	423	-82	1
chr1	105818306	105818307	chunk0009_187_1	12.1886	AR_DHT_Control	chr1	105818261	105818338	-143138084	-	LTR16E1	LTR	ERVL	-450	88	12	1
chr1	105855513	105855514	chunk0009_189_1	17.32112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	105855051	105855633	-143100789	-	L1MC4	LINE	L1	-868	7174	6659	1
chr1	105911208	105911209	chunk0009_190_1	23.14702	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	105909976	105912681	-143043741	+	HUERS-P2-int	LTR	ERV1	169	2671	-417	1
chr1	105941703	105941704	chunk0009_194_1	30.4773	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	105939895	105943301	-143013121	-	L1PB1	LINE	L1	-360	5791	2362	1
chr1	105956546	105956547	chunk0009_198_1	108.4994	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	105956478	105956938	-142999484	+	MER70A	LTR	ERVL	1	470	-2	1
chr1	106007541	106007542	chunk0009_199_1	63.3594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106006736	106008110	-142948312	+	L1MC1	LINE	L1	4942	6332	-1	1
chr1	106044843	106044844	chunk0009_202_1	26.50203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106044649	106045354	-142911068	+	L1MC1	LINE	L1	5447	6128	-205	1
chr1	106127461	106127462	chunk0009_207_1	46.0644	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	106127275	106127665	-142828757	-	MER97b	DNA	hAT-Tip100	-290	759	346	1
chr1	106134615	106134616	chunk0009_208_1	8.18895	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106134552	106134794	-142821628	-	L2	LINE	L2	-1024	2395	2134	1
chr1	106154445	106154446	chunk0009_209_1	30.41829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106154409	106154499	-142801923	-	L2a	LINE	L2	-13	3413	3321	1
chr1	106276574	106276575	chunk0009_214_1	268.0251	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	106276098	106276622	-142679800	-	MLT2B4	LTR	ERVL	-11	545	6	1
chr1	106317155	106317156	chunk0009_215_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106316984	106317393	-142639029	+	MLT1E2	LTR	ERVL-MaLR	223	627	0	1
chr1	106480835	106480836	chunk0009_217_1	14.7022	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	106480612	106482729	-142473693	+	L1PB2	LINE	L1	4777	6917	-3	1
chr1	106644399	106644400	chunk0009_225_1	96.0241	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	106644340	106644546	-142311876	-	MIR	SINE	MIR	0	262	29	1
chr1	106673715	106673716	chunk0009_227_1	64.312	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	106673609	106674045	-142282377	+	L1ME3A	LINE	L1	5652	6155	-18	1
chr1	106690103	106690104	chunk0009_230_1	5.47663	AR_DHT_Control	chr1	106690072	106690275	-142266147	+	CR1_Mam	LINE	CR1	798	993	-1211	1
chr1	106704097	106704098	chunk0009_232_1	38.94238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	106703636	106705209	-142251213	-	L1MC1	LINE	L1	-18	6315	4640	1
chr1	106879615	106879616	chunk0009_237_1	6.3126	AR_DHT_Control	chr1	106879179	106881787	-142074635	+	L1M1	LINE	L1	16	2757	-4808	1
chr1	106978738	106978739	chunk0009_241_1	17.91988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	106978409	106978790	-141977632	+	MER99	DNA	hAT?	213	577	-254	1
chr1	106986733	106986734	chunk0009_242_1	7.36432	AR_DHT_Control	chr1	106986506	106986919	-141969503	-	LTR53	LTR	ERVL	0	519	96	1
chr1	106998614	106998615	chunk0009_244_1	108.41107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	106998401	106998833	-141957589	-	MER70A	LTR	ERVL	-27	445	4	1
chr1	107094656	107094657	chunk0009_254_1	6.58746	AR_DHT_Control	chr1	107094554	107094720	-141861702	+	L2c	LINE	L2	3125	3278	-109	1
chr1	107100205	107100206	chunk0009_255_1	73.2449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	107100159	107100336	-141856086	-	MIR	SINE	MIR	0	262	28	1
chr1	107414723	107414724	chunk0009_259_1	17.52724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	107414715	107414914	-141541508	-	MIR	SINE	MIR	-6	256	9	1
chr1	107501292	107501293	chunk0009_275_1	9.68651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	107501201	107501415	-141455007	-	MER58A	DNA	hAT-Charlie	-6	218	1	1
chr1	107790385	107790386	chunk0009_296_1	15.36106	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	107790320	107790592	-141165830	-	L2a	LINE	L2	-23	3403	3102	1
chr1	108342431	108342432	chunk0009_311_1	42.35865	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	108342360	108342559	-140613863	-	L1PA14	LINE	L1	-4098	2591	2391	1
chr1	108526756	108526757	chunk0009_312_1	8.64577	AR_DHT_Control	chr1	108526582	108526888	-140429534	+	MLT1J2	LTR	ERVL-MaLR	65	405	-43	1
chr1	108571120	108571121	chunk0009_313_1	11.2868	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	108570354	108571624	-140384798	-	L2	LINE	L2	-1783	1636	190	1
chr1	108704815	108704816	chunk0009_320_1	45.1777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	108704720	108704841	-140251581	-	MamRep1879	DNA	hAT-Tip100?	-37	179	56	1
chr1	108953614	108953615	chunk0009_327_1	7.74912	AR_DHT_Control	chr1	108953572	108953655	-140002767	+	L2b	LINE	L2	3287	3365	-10	1
chr1	109058452	109058453	chunk0009_329_1	11.1716	AR_DHT_Control	chr1	109058263	109058595	-139897827	+	MLT1D	LTR	ERVL-MaLR	30	402	-103	1
chr1	109168402	109168403	chunk0009_340_1	45.8829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	109167908	109168451	-139787971	+	L2b	LINE	L2	2802	3361	-14	1
chr1	109370753	109370754	chunk0009_344_1	8.08101	AR_DHT_Control	chr1	109370733	109370834	-139585588	+	L2c	LINE	L2	3291	3385	-2	1
chr1	109724464	109724465	chunk0009_358_1	20.1999	AR_DHT_Control	chr1	109724332	109724554	-139231868	-	MER4A1	LTR	ERV1	0	472	247	1
chr1	109725693	109725694	chunk0009_361_1	48.63662	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	109725516	109725947	-139230475	+	LTR3	LTR	ERVK	1	432	0	1
chr1	109741939	109741940	chunk0009_362_1	7.17788	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	109741876	109742014	-139214408	-	L2a	LINE	L2	-1101	2318	2178	1
chr1	109781928	109781929	chunk0009_363_1	5.28628	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	109781620	109782415	-139174007	-	L1ME4b	LINE	L1	-56	836	4	1
chr1	109876798	109876799	chunk0009_371_1	102.8243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	109876634	109876820	-139079602	-	L1ME4a	LINE	L1	-262	5862	5676	1
chr1	109970874	109970875	chunk0009_381_1	8.27376	AR_DHT_Control	chr1	109970835	109971566	-138984856	+	L1MC1	LINE	L1	5767	6507	-1	1
chr1	110158065	110158066	chunk0009_393_1	24.01575	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	110157602	110158207	-138798215	+	L2a	LINE	L2	2803	3421	-5	1
chr1	110214689	110214690	chunk0009_394_1	12.94415	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	110214477	110214711	-138741711	-	MIRb	SINE	MIR	0	268	13	1
chr1	110292684	110292685	chunk0009_401_1	81.9456	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	110292654	110292759	-138663663	+	MIR3	SINE	MIR	16	127	-81	1
chr1	110414756	110414757	chunk0009_407_1	9.23066	AR_DHT_Control	chr1	110414504	110414897	-138541525	+	MLT1B	LTR	ERVL-MaLR	1	383	-7	1
chr1	110578323	110578324	chunk0009_412_1	151.2646	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	110577897	110578845	-138377577	-	L1ME1	LINE	L1	-1	6178	5223	1
chr1	110612398	110612399	chunk0009_413_1	10.7058	AR_DHT_Control	chr1	110612193	110612407	-138344015	-	Tigger3c	DNA	TcMar-Tigger	0	602	385	1
chr1	110828640	110828641	chunk0009_420_1	16.1689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	110827815	110828854	-138127568	+	L1MEd	LINE	L1	2130	3161	-2985	1
chr1	110991959	110991960	chunk0009_423_1	16.1385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	110991458	110992493	-137963929	-	L1PB1	LINE	L1	-566	5585	4485	1
chr1	111045581	111045582	chunk0009_424_1	5.56779	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	111045552	111045816	-137910606	+	LTR87	LTR	ERVL?	65	318	-306	1
chr1	111056519	111056520	chunk0009_425_1	44.5038	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	111054282	111057600	-137898822	-	L1PBa	LINE	L1	-529	6338	3030	1
chr1	111099421	111099422	chunk0009_427_1	7.09019	AR_DHT_Control	chr1	111099220	111099612	-137856810	+	LTR22A	LTR	ERVK	16	420	-38	1
chr1	111110396	111110397	chunk0009_428_1	6.58498	AR_DHT_Control	chr1	111107422	111111020	-137845402	-	L1MA4	LINE	L1	-3050	4512	17	1
chr1	111133728	111133729	chunk0009_429_1	5.16131	AR_DHT_Control	chr1	111133651	111133754	-137822668	-	MIR	SINE	MIR	-150	112	2	1
chr1	111142822	111142823	chunk0009_430_1	17.504	AR_DHT_Control	chr1	111142671	111142867	-137813555	-	L2b	LINE	L2	-15	3372	3188	1
chr1	111151035	111151036	chunk0009_431_1	156.0617	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	111150980	111151114	-137805308	-	MER4E1	LTR	ERV1	-2	779	652	1
chr1	111156355	111156356	chunk0009_433_1	5.40815	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	111155837	111156476	-137799946	-	L1MA5	LINE	L1	-2974	3166	2585	1
chr1	111360457	111360458	chunk0009_437_1	18.8686	AR_DHT_Control	chr1	111359723	111360685	-137595737	-	LTR5_Hs	LTR	ERVK	-3	965	1	1
chr1	111406449	111406450	chunk0009_443_1	53.7145	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	111406268	111406504	-137549918	+	LTR41	LTR	ERVL	9	247	-521	1
chr1	111420535	111420536	chunk0009_445_1	5.37017	AR_DHT_Control	chr1	111420508	111420633	-137535789	+	L2a	LINE	L2	3040	3164	-262	1
chr1	111565994	111565995	chunk0009_447_1	15.2076	AR_DHT_Control	chr1	111565923	111566401	-137390021	-	L2c	LINE	L2	-341	3078	2554	1
chr1	111590927	111590928	chunk0009_450_1	29.9131	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	111590720	111591561	-137364861	-	L1M5	LINE	L1	-2310	3836	2876	1
chr1	111643239	111643240	chunk0009_461_1	186.796	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	111643070	111643324	-137313098	-	MER58B	DNA	hAT-Charlie	-9	332	1	1
chr1	111783762	111783763	chunk0010_3_1	18.73665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	111783650	111784102	-137172320	+	L1MD2	LINE	L1	5628	6106	-253	1
chr1	111822926	111822927	chunk0010_4_1	7.20445	AR_DHT_Control	chr1	111822878	111823030	-137133392	-	MIRb	SINE	MIR	-40	228	55	1
chr1	111841393	111841394	chunk0010_5_1	207.428	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	111840972	111841510	-137114912	-	L3	LINE	CR1	-2237	1862	1177	1
chr1	111885209	111885210	chunk0010_8_1	17.9962	AR_DHT_Control	chr1	111885078	111885433	-137070989	+	L3	LINE	CR1	2913	3294	-805	1
chr1	111976554	111976555	chunk0010_11_1	30.5007	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	111976513	111976777	-136979645	-	L2c	LINE	L2	-12	3375	3067	1
chr1	112054739	112054740	chunk0010_13_1	55.3814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	112054569	112055264	-136901158	+	L1MC4	LINE	L1	7392	8040	-2	1
chr1	112474531	112474532	chunk0010_30_1	19.5679	AR_DHT_Control	chr1	112474447	112474664	-136481758	+	L1MEc	LINE	L1	1460	1723	-4677	1
chr1	112594151	112594152	chunk0010_35_1	4.73937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	112593991	112594622	-136361800	+	Charlie2b	DNA	hAT-Charlie	15	671	-2111	1
chr1	112642104	112642105	chunk0010_36_1	198.7987	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	112642099	112642202	-136314220	+	L2c	LINE	L2	3041	3161	-226	1
chr1	112688174	112688175	chunk0010_39_1	6.89429	AR_DHT_Control	chr1	112687941	112688256	-136268166	+	L2b	LINE	L2	3057	3374	-1	1
chr1	112841453	112841454	chunk0010_44_1	23.99414	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	112841179	112841501	-136114921	+	L2a	LINE	L2	2871	3244	-182	1
chr1	112880582	112880583	chunk0010_46_1	10.3813	AR_DHT_Control	chr1	112880260	112880695	-136075727	-	LTR54	LTR	ERV1	0	498	1	1
chr1	112891265	112891266	chunk0010_48_1	51.6703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	112890993	112891292	-136065130	-	AluSx1	SINE	Alu	-15	297	1	1
chr1	112896300	112896301	chunk0010_49_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	112896147	112896458	-136059964	-	LTR17	LTR	ERV1	0	780	448	1
chr1	112905980	112905981	chunk0010_50_1	9.09887	AR_DHT_Control	chr1	112905949	112906133	-136050289	+	Tigger19a	DNA	TcMar-Tigger	54	236	-87	1
chr1	112953940	112953941	chunk0010_56_1	9.46495	AR_DHT_Control	chr1	112953568	112954054	-136002368	+	L2b	LINE	L2	2887	3386	-40	1
chr1	113021862	113021863	chunk0010_60_1	19.0252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	113021565	113022010	-135934412	+	L2b	LINE	L2	2953	3374	-1	1
chr1	113027241	113027242	chunk0010_61_1	5.99997	AR_DHT_Control	chr1	113027162	113027362	-135929060	+	MIRb	SINE	MIR	9	222	-46	1
chr1	113050465	113050466	chunk0010_64_1	86.77765	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	113050358	113050740	-135905682	+	L1ME1	LINE	L1	5668	6046	-133	1
chr1	113155362	113155363	chunk0010_72_1	81.5285	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	113154758	113155505	-135800917	-	L1MC1	LINE	L1	-18	6490	5758	1
chr1	113242609	113242610	chunk0010_75_1	11.4715	AR_DHT_Control	chr1	113242363	113242855	-135713567	-	MLT1G3	LTR	ERVL-MaLR	-61	534	1	1
chr1	113420017	113420018	chunk0010_82_1	4.5547	AR_DHT_Control	chr1	113420016	113420273	-135536149	+	L3	LINE	CR1	3829	4096	-3	1
chr1	113422558	113422559	chunk0010_83_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	113422317	113423272	-135533150	-	LTR2752	LTR	ERV1	0	1755	258	1
chr1	113434755	113434756	chunk0010_85_1	57.7447	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	113434735	113434840	-135521582	-	L2a	LINE	L2	-9	3417	3252	1
chr1	113488735	113488736	chunk0010_87_1	8.27376	AR_DHT_Control	chr1	113488204	113494515	-135461907	+	L1PA13	LINE	L1	334	6772	-11	1
chr1	113515525	113515526	chunk0010_89_1	27.12839	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	113515484	113515715	-135440707	-	MIRb	SINE	MIR	-15	253	26	1
chr1	113739783	113739784	chunk0010_92_1	19.87735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	113739452	113740746	-135215676	-	L1MA5	LINE	L1	-3	6297	4959	1
chr1	113904357	113904358	chunk0010_96_1	5.91555	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	113904219	113904450	-135051972	-	L2c	LINE	L2	-921	2498	2254	1
chr1	114034200	114034201	chunk0010_101_1	93.649	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	114034030	114034597	-134921825	+	MER41C	LTR	ERV1	1	521	0	1
chr1	114174497	114174498	chunk0010_107_1	18.7525	AR_DHT_Control	chr1	114174402	114174546	-134781876	-	L2a	LINE	L2	-52	3374	3214	1
chr1	114457559	114457560	chunk0010_118_1	36.7567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	114457297	114457827	-134498595	+	MER21-int	LTR	ERVL	1943	2462	-1729	1
chr1	114530365	114530366	chunk0010_127_1	60.03677	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	114530297	114530542	-134425880	+	L1MC4	LINE	L1	6811	7072	-970	1
chr1	114539223	114539224	chunk0010_129_1	16.11841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	114539070	114539485	-134416937	-	HAL1	LINE	L1	-1744	763	288	1
chr1	114866171	114866172	chunk0010_143_1	38.2074	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	114865612	114868119	-134088303	-	L1MC1	LINE	L1	-88	6245	3782	1
chr1	115143431	115143432	chunk0010_147_1	25.75419	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	115143370	115143528	-133812894	-	MIRb	SINE	MIR	-10	258	96	1
chr1	115377079	115377080	chunk0010_154_1	5.73759	AR_DHT_Control	chr1	115377066	115377223	-133579199	+	MamRTE1	LINE	RTE-BovB	3618	3808	-4	1
chr1	115644536	115644537	chunk0010_167_1	7.38769	AR_DHT_Control	chr1	115644518	115644566	-133311856	+	(GTTTGAA)n	Simple_repeat	Simple_repeat	1	50	0	1
chr1	115775965	115775966	chunk0010_175_1	9.74833	AR_DHT_Control	chr1	115775180	115776305	-133180117	-	L1ME1	LINE	L1	-1295	5024	3868	1
chr1	115811277	115811278	chunk0010_177_1	65.5299	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	115810896	115811500	-133144922	-	MER77	LTR	ERVL	0	604	6	1
chr1	115933836	115933837	chunk0010_185_1	12.09027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	115933795	115933928	-133022494	-	MLT1H2	LTR	ERVL-MaLR	-306	183	46	1
chr1	115954762	115954763	chunk0010_191_1	106.7479	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	115954697	115954800	-133001622	+	OldhAT1	DNA	hAT-Ac	1476	1575	-1273	1
chr1	116001322	116001323	chunk0010_193_1	24.0644	AR_DHT_Control	chr1	116000931	116003826	-132952596	-	L1M1	LINE	L1	-4523	3042	109	1
chr1	116008783	116008784	chunk0010_194_1	6.79294	AR_DHT_Control	chr1	116008741	116008797	-132947625	-	MIRc	SINE	MIR	-135	133	78	1
chr1	116068625	116068626	chunk0010_199_1	23.30971	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	116068501	116068669	-132887753	+	L2a	LINE	L2	3219	3414	-12	1
chr1	116189656	116189657	chunk0010_215_1	107.9656	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	116189625	116190028	-132766394	+	L1ME3G	LINE	L1	268	641	-283	1
chr1	116207354	116207355	chunk0010_218_1	119.43522	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	116207204	116207789	-132748633	+	L1ME3	LINE	L1	5520	6162	0	1
chr1	116289374	116289375	chunk0010_221_1	12.3036	AR_DHT_Control	chr1	116289304	116289509	-132666913	+	MER58A	DNA	hAT-Charlie	26	224	0	1
chr1	116453716	116453717	chunk0010_241_1	8.1121	AR_DHT_Control	chr1	116453641	116453812	-132502610	-	MIRb	SINE	MIR	-7	261	70	1
chr1	116456483	116456484	chunk0010_244_1	37.39304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	116456394	116456577	-132499845	+	L3	LINE	CR1	3641	3851	-248	1
chr1	116476515	116476516	chunk0010_248_1	228.6985	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	116476505	116476593	-132479829	+	L2c	LINE	L2	3273	3363	-24	1
chr1	116556815	116556816	chunk0010_251_1	9.63374	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	116556784	116557001	-132399421	-	MER102a	DNA	hAT-Charlie	-56	275	72	1
chr1	116622715	116622716	chunk0010_256_1	7.87682	AR_DHT_Control	chr1	116622669	116622806	-132333616	-	MIRb	SINE	MIR	-38	230	88	1
chr1	116674986	116674987	chunk0010_261_1	18.49911	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	116674870	116675030	-132281392	+	L2a	LINE	L2	3259	3422	-4	2
chr1	116717565	116717566	chunk0010_262_1	31.6952	AR_DHT_Control	chr1	116717470	116717626	-132238796	+	L2	LINE	L2	2884	3047	-372	2
chr1	116885531	116885532	chunk0010_263_1	31.9043	AR_DHT_Control	chr1	116885398	116885799	-132070623	+	L2a	LINE	L2	2966	3422	-4	2
chr1	117225289	117225290	chunk0010_272_1	8.13469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	117225233	117225577	-131730845	+	MLT1I	LTR	ERVL-MaLR	60	407	-4	2
chr1	117318199	117318200	chunk0010_274_1	18.16816	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	117317765	117318297	-131638125	-	L1MB5	LINE	L1	-36	6138	5570	2
chr1	117336666	117336667	chunk0010_277_1	7.09019	AR_DHT_Control	chr1	117335499	117336856	-131619566	+	MamGyp-int	LTR	Gypsy	397	1716	-3387	2
chr1	117405082	117405083	chunk0010_279_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	117405071	117405155	-131551267	+	MER58A	DNA	hAT-Charlie	70	147	-77	2
chr1	117466858	117466859	chunk0010_280_1	6.83133	AR_DHT_Control	chr1	117466830	117466969	-131489453	-	L2b	LINE	L2	-1	3374	3233	2
chr1	117478815	117478816	chunk0010_281_1	19.5553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	117478108	117478904	-131477518	-	L1ME1	LINE	L1	-704	5648	4828	2
chr1	117753685	117753686	chunk0010_300_1	17.2924	AR_DHT_Control	chr1	117753337	117753788	-131202634	-	L2c	LINE	L2	-8	3379	2926	2
chr1	117997745	117997746	chunk0010_308_1	31.81816	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	117997614	117997923	-130958499	-	MER58B	DNA	hAT-Charlie	-4	337	1	2
chr1	118047829	118047830	chunk0010_310_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	118047374	118048430	-130907992	+	L1MA8	LINE	L1	635	1762	-5268	2
chr1	118052831	118052832	chunk0010_311_1	6.41766	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	118052707	118052861	-130903561	+	L1MEd	LINE	L1	3634	3797	-2349	2
chr1	118059559	118059560	chunk0010_314_1	90.8969	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118059530	118059971	-130896451	-	L1M1	LINE	L1	-3599	3960	3508	2
chr1	118069888	118069889	chunk0010_316_1	22.49905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118069358	118070014	-130886408	-	L2a	LINE	L2	-739	2680	1953	2
chr1	118101161	118101162	chunk0010_318_1	19.01356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118101133	118101428	-130854994	+	AluJr	SINE	Alu	2	290	-22	2
chr1	118111004	118111005	chunk0010_320_1	30.38278	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	118110852	118111117	-130845305	+	MIRb	SINE	MIR	3	268	0	2
chr1	118142677	118142678	chunk0010_324_1	7.97574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	118142587	118142840	-130813582	-	MIR	SINE	MIR	0	262	2	2
chr1	118196731	118196732	chunk0010_326_1	22.03114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	118195923	118197106	-130759316	-	L1MC3	LINE	L1	-1	7784	6500	2
chr1	118321611	118321612	chunk0010_330_1	6.94032	AR_DHT_Control	chr1	118321526	118321783	-130634639	+	LTR37B	LTR	ERV1	193	468	0	2
chr1	118479529	118479530	chunk0010_337_1	22.79006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118479453	118479629	-130476793	+	MLT1H	LTR	ERVL-MaLR	392	591	0	2
chr1	118517143	118517144	chunk0010_343_1	46.3793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118511786	118517922	-130438500	-	L1PA6	LINE	L1	0	6327	176	2
chr1	118588957	118588958	chunk0010_344_1	11.6866	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	118588853	118588970	-130367452	+	L1MA7	LINE	L1	6173	6285	-6	2
chr1	118602565	118602566	chunk0010_348_1	248.6176	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	118602563	118602798	-130353624	+	MER90a	LTR	ERV1	72	290	-324	2
chr1	118618181	118618182	chunk0010_350_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	118615872	118619673	-130336749	-	L1MA2	LINE	L1	-3692	3873	22	2
chr1	118699914	118699915	chunk0010_353_1	6.48643	AR_DHT_Control	chr1	118697736	118700263	-130256159	+	Tigger2	DNA	TcMar-Tigger	160	2714	-4	2
chr1	118798166	118798167	chunk0010_356_1	47.1262	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	118798053	118799893	-130156529	-	L1MA7	LINE	L1	-1891	4252	2434	2
chr1	118826031	118826032	chunk0010_360_1	48.25123	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	118825986	118826214	-130130208	-	MLT1I	LTR	ERVL-MaLR	-127	284	71	2
chr1	119015730	119015731	chunk0010_367_1	17.8382	AR_DHT_Control	chr1	119015604	119015813	-129940609	+	L2a	LINE	L2	3186	3419	-7	2
chr1	119052901	119052902	chunk0010_370_1	63.6097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	119052697	119053038	-129903384	-	MLT1I	LTR	ERVL-MaLR	0	411	74	2
chr1	119185653	119185654	chunk0010_374_1	141.94221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	119185384	119186269	-129770153	-	L1M2	LINE	L1	-898	5393	4154	2
chr1	119187614	119187615	chunk0010_377_1	38.81825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	119187557	119187702	-129768720	-	L1M2	LINE	L1	-1942	4204	4074	2
chr1	119216479	119216480	chunk0010_378_1	9.21264	AR_DHT_Control	chr1	119216375	119216594	-129739828	-	L1ME3	LINE	L1	0	6162	5908	2
chr1	119238545	119238546	chunk0010_379_1	4.73472	AR_DHT_Control	chr1	119238530	119238714	-129717708	+	MER5A	DNA	hAT-Charlie	4	189	0	2
chr1	119279302	119279303	chunk0010_382_1	6.73937	AR_DHT_Control	chr1	119279277	119279379	-129677043	+	L2c	LINE	L2	3277	3377	-10	2
chr1	119346693	119346694	chunk0010_384_1	26.2616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	119346584	119346821	-129609601	+	LTR8	LTR	ERV1	1	257	-434	2
chr1	119347274	119347275	chunk0010_385_1	4.73472	AR_DHT_Control	chr1	119346821	119347458	-129608964	-	MER4-int	LTR	ERV1	-4103	2495	1820	2
chr1	119379335	119379336	chunk0010_387_1	80.72007	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	119378945	119379469	-129576953	-	MER68	LTR	ERVL	0	563	4	2
chr1	119403468	119403469	chunk0010_390_1	9.21264	AR_DHT_Control	chr1	119399357	119403472	-129552950	-	L1PA4	LINE	L1	-18	6137	2008	2
chr1	119428186	119428187	chunk0010_392_1	63.1651	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	119423839	119428766	-129527656	-	PRIMA4-int	LTR	ERV1	0	8270	3271	2
chr1	119472405	119472406	chunk0010_395_1	28.56568	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	119472359	119472820	-129483602	-	HUERS-P2-int	LTR	ERV1	-254	2834	2324	2
chr1	119576871	119576872	chunk0010_406_1	34.2933	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	119573878	119577081	-129379341	+	L1PA6	LINE	L1	5	3184	-2962	2
chr1	119675086	119675087	chunk0010_419_1	4.71246	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	119674919	119675108	-129281314	+	MER20	DNA	hAT-Charlie	41	219	0	2
chr1	119747134	119747135	chunk0010_423_1	5.47663	AR_DHT_Control	chr1	119747077	119747145	-129209277	-	MamRep38	DNA	hAT	-220	75	3	2
chr1	119776644	119776645	chunk0010_428_1	52.6209	AR_DHT_Control	chr1	119776541	119776941	-129179481	+	L1MEh	LINE	L1	1298	1732	-503	2
chr1	119780060	119780061	chunk0010_430_1	45.41734	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	119779703	119780085	-129176337	+	HAL1M8	LINE	L1	5	417	-2574	2
chr1	119791026	119791027	chunk0010_433_1	8.18895	AR_DHT_Control	chr1	119790879	119791083	-129165339	-	MIRb	SINE	MIR	-11	257	7	2
chr1	119974754	119974755	chunk0010_439_1	8.60744	AR_DHT_Control	chr1	119974577	119974929	-128981493	+	L2b	LINE	L2	2949	3315	-60	2
chr1	120921868	120921869	chunk0010_445_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	120921585	120921875	-128034547	-	AluSq	SINE	Alu	-8	305	1	2
chr1	125166671	125166672	chunk0011_2_1	24.1334	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	125164017	125167986	-123788436	+	(GATTC)n	Simple_repeat	Simple_repeat	5	4104	0	2
chr1	143924264	143924265	chunk0011_69_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	143923717	143924456	-105031966	+	MamRep1527	LTR	LTR	244	919	-50	2
chr1	144103696	144103697	chunk0011_71_1	51.6783	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	144101292	144106919	-104849503	+	(TGGCTGGCT)n	Simple_repeat	Simple_repeat	1	5911	0	2
chr1	144104517	144104518	chunk0011_74_1	86.7242	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	144101292	144106919	-104849503	+	(TGGCTGGCT)n	Simple_repeat	Simple_repeat	1	5911	0	2
chr1	144412682	144412683	chunk0011_75_1	19.87137	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	144412575	144412741	-104543681	+	U1	snRNA	snRNA	1	165	0	2
chr1	145256344	145256345	chunk0011_84_1	15.7965	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	145256305	145256394	-103700028	-	L1MA6	LINE	L1	0	6300	6210	2
chr1	145747799	145747800	chunk0011_90_1	7.17788	AR_DHT_Control	chr1	145747650	145747848	-103208574	-	MER58A	DNA	hAT-Charlie	-25	199	1	2
chr1	145807071	145807072	chunk0011_93_1	10.6105	AR_DHT_Control	chr1	145807040	145807103	-103149319	+	L2a	LINE	L2	3360	3425	-1	2
chr1	145987146	145987147	chunk0011_104_1	12.7204	AR_DHT_Control	chr1	145987041	145987263	-102969159	-	MIR	SINE	MIR	-30	232	1	2
chr1	146012917	146012918	chunk0011_112_1	19.25961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	146012827	146013138	-102943284	-	HAL1	LINE	L1	-296	2211	1906	2
chr1	146037123	146037124	chunk0011_113_1	6.45888	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	146037060	146037132	-102919290	+	tRNA-Gly-GGA	tRNA	tRNA	1	72	-3	2
chr1	146943709	146943710	chunk0011_118_1	47.0902	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	146943584	146943717	-102012705	+	L2a	LINE	L2	3313	3425	-1	2
chr1	147106241	147106242	chunk0011_125_1	9.37328	AR_DHT_Control	chr1	147106116	147107077	-101849345	-	LTR5_Hs	LTR	ERVK	0	968	1	2
chr1	147163263	147163264	chunk0011_130_1	14.2056	AR_DHT_Control	chr1	147163102	147163859	-101792563	+	L1MB7	LINE	L1	5407	6168	-16	2
chr1	147177846	147177847	chunk0011_133_1	6.13915	AR_DHT_Control	chr1	147176876	147177857	-101778565	+	L1MC3	LINE	L1	6527	7583	-202	2
chr1	147219739	147219740	chunk0011_134_1	50.79696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	147219426	147219840	-101736582	+	L1MC	LINE	L1	3934	4328	-1818	2
chr1	147231244	147231245	chunk0011_135_1	34.765	AR_DHT_Control	chr1	147228009	147231695	-101724727	-	L1PA4	LINE	L1	-1	6154	2462	2
chr1	147242375	147242376	chunk0011_139_1	29.24348	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	147242301	147242400	-101714022	+	L2b	LINE	L2	3271	3374	-1	2
chr1	147389043	147389044	chunk0011_144_1	5.16131	AR_DHT_Control	chr1	147388613	147390776	-101565646	+	L1P4d	LINE	L1	1	2210	-4725	2
chr1	147437275	147437276	chunk0011_145_1	13.2796	AR_DHT_Control	chr1	147436985	147437602	-101518820	-	LTR51	LTR	ERV1	0	671	1	2
chr1	147452413	147452414	chunk0011_146_1	65.6763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	147452347	147452423	-101503999	+	L3	LINE	CR1	3925	3999	-100	2
chr1	147638233	147638234	chunk0011_163_1	7.8637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	147638206	147638440	-101317982	-	MIR	SINE	MIR	0	262	1	2
chr1	147642255	147642256	chunk0011_164_1	17.38226	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	147642250	147642338	-101314084	-	L2b	LINE	L2	0	3375	3286	2
chr1	147680502	147680503	chunk0011_169_1	28.9709	AR_DHT_Control	chr1	147679843	147681332	-101275090	-	LTR12C	LTR	ERV1	0	1579	2	2
chr1	147681822	147681823	chunk0011_170_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	147681332	147685476	-101270946	+	L1MA8	LINE	L1	835	5028	-2534	2
chr1	147694619	147694620	chunk0011_171_1	7.87199	AR_DHT_Control	chr1	147694572	147695010	-101261412	-	MLT1K	LTR	ERVL-MaLR	0	595	153	2
chr1	147717149	147717150	chunk0011_172_1	6.58135	AR_DHT_Control	chr1	147717142	147717703	-101238719	+	LTR18B	LTR	ERVL	1	614	0	2
chr1	148263583	148263584	chunk0011_176_1	13.12022	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	148263476	148263632	-100692790	+	U1	snRNA	snRNA	2	164	-1	2
chr1	148332455	148332456	chunk0011_177_1	25.97681	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	148331960	148332697	-100623725	+	LTR8	LTR	ERV1	16	820	0	2
chr1	148334726	148334727	chunk0011_179_1	9.06829	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	148334611	148334766	-100621656	-	U1	snRNA	snRNA	-1	164	2	2
chr1	148451313	148451314	chunk0011_182_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	148451176	148451465	-100504957	+	AluSq	SINE	Alu	1	305	-8	2
chr1	148522720	148522721	chunk0011_184_1	36.49187	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	148522600	148522766	-100433656	+	U1	snRNA	snRNA	1	165	0	2
chr1	149919240	149919241	chunk0011_193_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	149919021	149919567	-99036855	-	MamRep605	LTR?	LTR?	-50	799	204	2
chr1	149932525	149932526	chunk0011_194_1	13.69549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	149932450	149932572	-99023850	+	L1MB7	LINE	L1	6055	6174	-10	2
chr1	149972707	149972708	chunk0011_195_1	6.37684	AR_DHT_Control	chr1	149972331	149972756	-98983666	+	L2a	LINE	L2	2962	3426	0	2
chr1	150014804	150014805	chunk0011_206_1	246.6249	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	150014433	150014928	-98941494	+	L1ME3A	LINE	L1	5594	6167	-277	2
chr1	150079687	150079688	chunk0011_210_1	9.07871	AR_DHT_Control	chr1	150079422	150079710	-98876712	-	AluSz6	SINE	Alu	-24	288	2	2
chr1	150206283	150206284	chunk0011_220_1	54.3525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	150205968	150206288	-98750134	+	LTR7B	LTR	ERV1	196	682	-25	2
chr1	150207651	150207652	chunk0011_221_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	150207382	150207902	-98748520	+	MER89	LTR	ERV1	1	541	-18	2
chr1	150234054	150234055	chunk0011_223_1	54.0919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	150233952	150234105	-98722317	+	MIRc	SINE	MIR	94	266	-2	2
chr1	150253315	150253316	chunk0011_224_1	7.53305	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	150253013	150253317	-98703105	+	AluJb	SINE	Alu	1	307	-5	2
chr1	150362977	150362978	chunk0011_227_1	7.34658	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	150362870	150363244	-98593178	+	L2a	LINE	L2	3034	3426	0	2
chr1	150389683	150389684	chunk0011_230_1	9.38051	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	150389345	150389726	-98566696	-	L1MC3	LINE	L1	-308	7477	7077	2
chr1	150407914	150407915	chunk0011_232_1	19.25885	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	150407910	150408092	-98548330	-	AluJb	SINE	Alu	-14	298	117	2
chr1	150529213	150529214	chunk0011_235_1	19.82543	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	150529162	150529357	-98427065	-	L2	LINE	L2	-1985	1434	1234	2
chr1	150597207	150597208	chunk0011_247_1	17.19574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	150597201	150597434	-98358988	+	L3	LINE	CR1	3066	3322	-777	2
chr1	150745953	150745954	chunk0011_252_1	17.4683	AR_DHT_Control	chr1	150745847	150746142	-98210280	-	L1MA9	LINE	L1	-22	6290	5889	2
chr1	150922556	150922557	chunk0011_259_1	6.88185	AR_DHT_Control	chr1	150922548	150922572	-98033850	+	L1ME3G	LINE	L1	5422	5445	-679	2
chr1	150936504	150936505	chunk0011_260_1	15.8634	AR_DHT_Control	chr1	150936448	150936693	-98019729	-	L1ME3E	LINE	L1	-396	5846	5586	2
chr1	150937236	150937237	chunk0011_261_1	10.231	AR_DHT_Control	chr1	150937147	150937471	-98018951	+	L1MB2	LINE	L1	5776	6125	-46	2
chr1	150955463	150955464	chunk0011_262_1	41.633	AR_DHT_Control	chr1	150955408	150955806	-98000616	+	L2c	LINE	L2	2978	3362	-25	2
chr1	151187455	151187456	chunk0011_272_1	17.19648	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	151187340	151187933	-97768489	+	L4_C_Mam	LINE	RTE-X	4399	5137	-1	2
chr1	151428197	151428198	chunk0011_283_1	5.66005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	151428196	151428260	-97528162	+	G-rich	Low_complexity	Low_complexity	1	64	0	2
chr1	151498693	151498694	chunk0011_291_1	5.98896	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	151498454	151498827	-97457595	-	ERV3-16A3_LTR	LTR	ERVL	-8	414	5	2
chr1	151514589	151514590	chunk0011_293_1	75.52692	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	151514553	151514843	-97441579	-	L2a	LINE	L2	-9	3417	3129	2
chr1	151553723	151553724	chunk0011_297_1	34.5879	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	151553649	151554014	-97402408	-	L1ME3A	LINE	L1	-510	5663	5300	2
chr1	151563590	151563591	chunk0011_299_1	6.9031	AR_DHT_Control	chr1	151563325	151563647	-97392775	+	Tigger3a	DNA	TcMar-Tigger	14	348	0	2
chr1	151596711	151596712	chunk0011_300_1	83.1207	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	151596441	151596824	-97359598	+	L2c	LINE	L2	3002	3382	-5	2
chr1	151733374	151733375	chunk0011_303_1	5.24685	AR_DHT_Control	chr1	151733226	151733473	-97222949	-	MLT1L	LTR	ERVL-MaLR	-4	606	242	2
chr1	151739958	151739959	chunk0011_304_1	6.18182	AR_DHT_Control	chr1	151739651	151740094	-97216328	+	LTR16	LTR	ERVL	1	438	0	2
chr1	151748938	151748939	chunk0011_306_1	25.38219	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	151748771	151749872	-97206550	-	L1MDa	LINE	L1	-4982	1651	510	2
chr1	151829924	151829925	chunk0011_308_1	17.9854	AR_DHT_Control	chr1	151829588	151830013	-97126409	+	L2c	LINE	L2	2945	3370	-17	2
chr1	151930346	151930347	chunk0011_315_1	7.18179	AR_DHT_Control	chr1	151930233	151930535	-97025887	-	MER57B1	LTR	ERV1	-90	311	1	2
chr1	151932162	151932163	chunk0011_316_1	9.94658	AR_DHT_Control	chr1	151931773	151932263	-97024159	-	HAL1M8	LINE	L1	-2380	611	84	2
chr1	152019615	152019616	chunk0011_324_1	20.74108	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	152019518	152019665	-96936757	+	MIR	SINE	MIR	96	241	-21	2
chr1	152193273	152193274	chunk0011_340_1	59.64497	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	152193258	152193287	-96763135	+	(TCCTC)n	Simple_repeat	Simple_repeat	1	30	0	2
chr1	152199053	152199054	chunk0011_341_1	9.45492	AR_DHT_Control	chr1	152198623	152199064	-96757358	-	L1ME3Cz	LINE	L1	-70	927	422	2
chr1	152209055	152209056	chunk0011_343_1	18.21	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	152209008	152209368	-96747054	-	L1ME3C	LINE	L1	-41	6082	5709	2
chr1	152316991	152316992	chunk0011_346_1	25.6356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	152316889	152318025	-96638397	+	L2	LINE	L2	1445	2671	-748	2
chr1	152372865	152372866	chunk0011_348_1	14.7788	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	152371278	152373306	-96583116	+	L1MD3	LINE	L1	4253	6337	-15	2
chr1	152470249	152470250	chunk0011_351_1	30.33089	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	152470169	152470312	-96486110	-	L2c	LINE	L2	-1	3386	3230	2
chr1	152507342	152507343	chunk0011_352_1	8.9624	AR_DHT_Control	chr1	152507187	152507496	-96448926	+	MamRep605	LTR?	LTR?	446	796	-53	2
chr1	152996955	152996956	chunk0011_359_1	6.28117	AR_DHT_Control	chr1	152996922	152997061	-95959361	+	AluJr	SINE	Alu	147	285	-27	2
chr1	153049610	153049611	chunk0011_360_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	153048825	153051603	-95904819	+	L1PA11	LINE	L1	6	2758	-4027	2
chr1	153049945	153049946	chunk0011_361_1	5.41601	AR_DHT_Control	chr1	153048825	153051603	-95904819	+	L1PA11	LINE	L1	6	2758	-4027	2
chr1	153084478	153084479	chunk0011_362_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	153083463	153087090	-95869332	+	L1PA13	LINE	L1	10	3635	-3131	2
chr1	153123167	153123168	chunk0011_363_1	16.1957	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	153122741	153123450	-95832972	+	L1PBa	LINE	L1	327	1067	-5796	2
chr1	153271133	153271134	chunk0011_365_1	9.34168	AR_DHT_Control	chr1	153270872	153273208	-95683214	-	L1MA8	LINE	L1	-4521	2975	725	2
chr1	153726134	153726135	chunk0011_376_1	8.08101	AR_DHT_Control	chr1	153726120	153726216	-95230206	-	MIRc	SINE	MIR	-19	249	139	2
chr1	153849101	153849102	chunk0011_383_1	45.227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	153849032	153849150	-95107272	-	FLAM_A	SINE	Alu	-13	129	1	2
chr1	154380665	154380666	chunk0011_413_1	6.7814	AR_DHT_Control	chr1	154380630	154380897	-94575525	+	L1ME3	LINE	L1	4899	5170	-976	2
chr1	154451078	154451079	chunk0011_420_1	6.5005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	154450927	154451203	-94505219	-	L2c	LINE	L2	-26	3400	3101	2
chr1	154644108	154644109	chunk0012_1_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	154644072	154644300	-94312122	-	L1MC1	LINE	L1	-821	5325	5101	2
chr1	154714261	154714262	chunk0012_3_1	7.82433	AR_DHT_Control	chr1	154713960	154714648	-94241774	+	(GT)n	Simple_repeat	Simple_repeat	1	744	0	2
chr1	154885463	154885464	chunk0012_17_1	33.99176	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	154885281	154885537	-94070885	+	L2c	LINE	L2	3075	3423	-3	2
chr1	155038837	155038838	chunk0012_30_1	107.3049	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	155038607	155038856	-93917566	+	L2c	LINE	L2	3044	3302	-85	2
chr1	155106047	155106048	chunk0012_35_1	5.73469	AR_DHT_Control	chr1	155106044	155106269	-93850153	+	AluJr4	SINE	Alu	55	282	-30	2
chr1	155125833	155125834	chunk0012_36_1	20.55711	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	155125808	155125928	-93830494	-	L2a	LINE	L2	-1	3425	3304	2
chr1	155475821	155475822	chunk0012_53_1	34.773	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	155475750	155476046	-93480376	+	L2b	LINE	L2	3081	3374	-1	2
chr1	155495604	155495605	chunk0012_55_1	22.9162	AR_DHT_Control	chr1	155495233	155495714	-93460708	-	Tigger3b	DNA	TcMar-Tigger	-6	1225	752	2
chr1	155509307	155509308	chunk0012_57_1	7.12934	AR_DHT_Control	chr1	155509198	155509380	-93447042	+	AluJr4	SINE	Alu	137	302	-10	2
chr1	155522089	155522090	chunk0012_59_1	37.2298	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	155522038	155522139	-93434283	+	L1MA3	LINE	L1	6197	6300	-5	2
chr1	155678243	155678244	chunk0012_66_1	21.7689	AR_DHT_Control	chr1	155678038	155678317	-93278105	+	Tigger3a	DNA	TcMar-Tigger	1	322	-26	2
chr1	155690735	155690736	chunk0012_71_1	26.04035	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	155690553	155690737	-93265685	+	L1MD3	LINE	L1	7776	7962	-33	2
chr1	155695341	155695342	chunk0012_72_1	8.3168	AR_DHT_Control	chr1	155693984	155697375	-93259047	-	HERVKC4-int	LTR	ERVK	-1313	3949	525	2
chr1	155801117	155801118	chunk0012_76_1	15.17143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	155801113	155801138	-93155284	+	(A)n	Simple_repeat	Simple_repeat	1	25	0	2
chr1	156218195	156218196	chunk0012_86_1	25.59331	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	156217748	156218262	-92738160	-	L1ME5	LINE	L1	-350	5844	5267	2
chr1	156290120	156290121	chunk0012_92_1	144.034	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	156290066	156290238	-92666184	+	L1ME4b	LINE	L1	536	720	-172	2
chr1	156301916	156301917	chunk0012_94_1	7.53305	AR_DHT_Control	chr1	156301545	156302024	-92654398	+	LTR27C	LTR	ERV1	255	766	-1	2
chr1	156302959	156302960	chunk0012_95_1	5.73469	AR_DHT_Control	chr1	156302818	156302985	-92653437	-	L1ME4b	LINE	L1	-255	637	436	2
chr1	156471773	156471774	chunk0012_99_1	41.0962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	156471728	156471860	-92484562	+	MER124	DNA?	DNA?	1	129	-268	2
chr1	156501052	156501053	chunk0012_101_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	156501040	156501087	-92455335	+	G-rich	Low_complexity	Low_complexity	1	47	0	2
chr1	156559948	156559949	chunk0012_104_1	75.20028	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	156559874	156559981	-92396441	-	L2	LINE	L2	-570	2849	2730	2
chr1	156970520	156970521	chunk0012_120_1	8.58061	AR_DHT_Control	chr1	156970480	156970675	-91985747	-	MIRc	SINE	MIR	-25	243	29	2
chr1	156979739	156979740	chunk0012_121_1	8.1827	AR_DHT_Control	chr1	156979738	156979838	-91976584	+	L2c	LINE	L2	3233	3330	-57	2
chr1	157011249	157011250	chunk0012_122_1	41.86782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	157010697	157012501	-91943921	+	L1MB8	LINE	L1	4323	6171	-7	2
chr1	157076028	157076029	chunk0012_126_1	23.9706	AR_DHT_Control	chr1	157075944	157076186	-91880236	-	MLT1J1	LTR	ERVL-MaLR	0	444	204	2
chr1	157169433	157169434	chunk0012_131_1	18.9107	AR_DHT_Control	chr1	157168501	157169524	-91786898	-	L1MC3	LINE	L1	-6	7779	6702	2
chr1	157221888	157221889	chunk0012_133_1	27.58841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	157221879	157224043	-91732379	-	L1MA8	LINE	L1	-511	5780	3576	2
chr1	157247736	157247737	chunk0012_136_1	18.76676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	157247705	157248851	-91707571	+	L1PB1	LINE	L1	5012	6151	0	2
chr1	157315641	157315642	chunk0012_141_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	157315264	157319281	-91637141	+	L1PA6	LINE	L1	5	3983	-2163	2
chr1	157683371	157683372	chunk0012_146_1	4.9245	AR_DHT_Control	chr1	157683342	157683455	-91272967	-	MIR3	SINE	MIR	-21	187	84	2
chr1	157701940	157701941	chunk0012_148_1	89.8354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	157701693	157701971	-91254451	+	L2b	LINE	L2	3120	3385	-2	2
chr1	157736447	157736448	chunk0012_149_1	43.33408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	157736202	157737504	-91218918	-	L1PA7	LINE	L1	-674	5489	4193	2
chr1	157910939	157910940	chunk0012_152_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	157909694	157911341	-91045081	+	MSTB2-int	LTR	ERVL-MaLR	1	1650	-1	2
chr1	158161663	158161664	chunk0012_156_1	15.4446	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	158161527	158161703	-90794719	+	CR1_Mam	LINE	CR1	1701	1875	-329	2
chr1	158197429	158197430	chunk0012_162_1	117.9058	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	158197411	158198490	-90757932	-	L1MA4	LINE	L1	-1226	4917	3829	2
chr1	158201430	158201431	chunk0012_165_1	62.4151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	158201119	158203041	-90753381	+	L1MEf	LINE	L1	2387	4236	-1910	2
chr1	158262702	158262703	chunk0012_166_1	7.09019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	158262196	158262986	-90693436	+	LOR1-int	LTR	ERV1	585	1408	-6712	2
chr1	158507120	158507121	chunk0012_168_1	4.56426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	158505036	158507710	-90448712	-	L1M1	LINE	L1	-4080	3485	22	2
chr1	158847075	158847076	chunk0012_175_1	37.3462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	158847040	158847310	-90109112	+	L1PB3	LINE	L1	5877	6147	-7	2
chr1	159247253	159247254	chunk0012_178_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	159246459	159247681	-89708741	-	L1MA7	LINE	L1	-5004	2482	1218	2
chr1	159294537	159294538	chunk0012_180_1	32.0181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	159294368	159294700	-89661722	+	L2a	LINE	L2	3055	3426	0	2
chr1	159380239	159380240	chunk0012_182_1	9.93187	AR_DHT_Control	chr1	159380142	159383126	-89573296	+	L1MB2	LINE	L1	2194	5242	-1134	2
chr1	159422147	159422148	chunk0012_183_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	159419601	159423076	-89533346	-	L1MA4A	LINE	L1	-3264	4298	718	2
chr1	159641427	159641428	chunk0012_188_1	36.65707	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	159641001	159641481	-89314941	-	L1ME4b	LINE	L1	-5440	871	345	2
chr1	159712295	159712296	chunk0012_190_1	13.7895	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	159712259	159712603	-89243819	-	MLT1K	LTR	ERVL-MaLR	-25	570	218	2
chr1	159779785	159779786	chunk0012_192_1	24.7868	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	159779703	159779853	-89176569	+	MIR	SINE	MIR	84	259	-3	2
chr1	159868183	159868184	chunk0012_196_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	159868172	159868466	-89087956	+	L3	LINE	CR1	3776	4094	-5	2
chr1	159949344	159949345	chunk0012_199_1	32.2996	AR_DHT_Control	chr1	159949089	159949446	-89006976	+	L2b	LINE	L2	2921	3343	-32	2
chr1	159958164	159958165	chunk0012_200_1	5.62266	AR_DHT_Control	chr1	159957877	159958260	-88998162	-	ERV3-16A3_LTR	LTR	ERVL	-7	415	25	2
chr1	160080917	160080918	chunk0012_208_1	11.7522	AR_DHT_Control	chr1	160080891	160081053	-88875369	-	MIRc	SINE	MIR	-67	201	35	2
chr1	160132207	160132208	chunk0012_213_1	398.1879	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	160132131	160132943	-88823479	-	L2	LINE	L2	-372	3047	2173	2
chr1	160148297	160148298	chunk0012_215_1	8.62581	AR_DHT_Control	chr1	160148197	160148509	-88807913	-	L2a	LINE	L2	-3	3423	3104	2
chr1	160157437	160157438	chunk0012_217_1	179.9372	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	160157178	160157492	-88798930	-	L1PA15	LINE	L1	-1	6164	5850	2
chr1	160194249	160194250	chunk0012_220_1	5.51891	AR_DHT_Control	chr1	160193931	160194901	-88761521	+	(CA)n	Simple_repeat	Simple_repeat	1	1021	0	2
chr1	160202145	160202146	chunk0012_222_1	131.0309	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	160202056	160202193	-88754229	-	L2b	LINE	L2	-10	3365	3224	2
chr1	160315558	160315559	chunk0012_228_1	24.76814	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	160314961	160315619	-88640803	+	L1MA4	LINE	L1	1241	1940	-4625	2
chr1	160320165	160320166	chunk0012_229_1	7.20445	AR_DHT_Control	chr1	160318497	160320327	-88636095	+	L1MA4	LINE	L1	3007	4853	-2709	2
chr1	160527138	160527139	chunk0012_232_1	10.7367	AR_DHT_Control	chr1	160526324	160530345	-88426077	-	L1PA7	LINE	L1	-2355	4106	8	2
chr1	160531037	160531038	chunk0012_233_1	11.0952	AR_DHT_Control	chr1	160530473	160531382	-88425040	-	L1MB4	LINE	L1	-20	6761	5835	2
chr1	160631084	160631085	chunk0012_235_1	4.84918	AR_DHT_Control	chr1	160630838	160631132	-88325290	+	L2c	LINE	L2	3043	3372	-15	2
chr1	160639113	160639114	chunk0012_236_1	15.8412	AR_DHT_Control	chr1	160638907	160639228	-88317194	+	L2a	LINE	L2	2205	2603	-816	2
chr1	160843257	160843258	chunk0012_241_1	18.83051	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	160843235	160843324	-88113098	+	L2c	LINE	L2	3247	3335	-52	2
chr1	160941261	160941262	chunk0012_244_1	52.679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	160936959	160942037	-88014385	-	L1P2	LINE	L1	-1128	5018	4	2
chr1	160951780	160951781	chunk0012_245_1	8.34329	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	160951707	160952210	-88004212	+	LTR75	LTR	ERVL	1	529	-33	2
chr1	161612751	161612752	chunk0012_261_1	10.83245	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	161612717	161612787	-87343635	+	tRNA-Gly-GGA	tRNA	tRNA	1	70	-5	2
chr1	161703240	161703241	chunk0012_262_1	5.58563	AR_DHT_Control	chr1	161703136	161703806	-87252616	+	L1ME1	LINE	L1	5567	6178	-1	2
chr1	161788216	161788217	chunk0012_271_1	13.57511	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	161788011	161788456	-87167966	-	L1M5	LINE	L1	-484	5710	5254	2
chr1	161824801	161824802	chunk0012_274_1	144.5783	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	161824777	161824889	-87131533	-	L2c	LINE	L2	-7	3380	3258	2
chr1	161884649	161884650	chunk0012_278_1	164.02011	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	161884591	161884801	-87071621	-	L2a	LINE	L2	-2	3424	3197	2
chr1	162140999	162141000	chunk0012_295_1	7.77075	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	162140352	162141131	-86815291	-	L1PA16	LINE	L1	-216	5950	5152	2
chr1	162179259	162179260	chunk0012_300_1	16.19088	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	162179162	162179417	-86777005	-	MIR	SINE	MIR	-5	257	3	2
chr1	162189589	162189590	chunk0012_301_1	109.5876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	162189512	162190024	-86766398	-	L2a	LINE	L2	0	3426	2913	2
chr1	162206476	162206477	chunk0012_304_1	8.40735	AR_DHT_Control	chr1	162206366	162206570	-86749852	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr1	162207471	162207472	chunk0012_305_1	19.05224	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	162207399	162207636	-86748786	+	MIRb	SINE	MIR	4	261	-7	2
chr1	162258127	162258128	chunk0012_309_1	51.0443	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	162258023	162258305	-86698117	+	L2c	LINE	L2	2939	3326	-61	2
chr1	162274019	162274020	chunk0012_311_1	8.97818	AR_DHT_Control	chr1	162273900	162274221	-86682201	-	L1ME1	LINE	L1	-357	5822	5492	2
chr1	162303127	162303128	chunk0012_315_1	136.48148	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	162302647	162303444	-86652978	-	L1ME1	LINE	L1	-1	6178	5390	2
chr1	162318893	162318894	chunk0012_317_1	19.38629	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	162318176	162318953	-86637469	+	L2	LINE	L2	1758	2594	-825	2
chr1	162475737	162475738	chunk0012_326_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	162475109	162476295	-86480127	+	L1MA3	LINE	L1	303	2177	-5388	2
chr1	162614547	162614548	chunk0012_345_1	12.5159	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	162614478	162614808	-86341614	-	L1ME4c	LINE	L1	-206	624	289	2
chr1	162660827	162660828	chunk0012_347_1	49.4674	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	162660737	162660959	-86295463	+	MER58A	DNA	hAT-Charlie	1	221	-3	2
chr1	162678568	162678569	chunk0012_348_1	7.34658	AR_DHT_Control	chr1	162678492	162678573	-86277849	-	MIR3	SINE	MIR	-15	193	112	2
chr1	162693443	162693444	chunk0012_349_1	13.42443	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	162693440	162693841	-86262581	-	L2a	LINE	L2	-1	3425	3016	2
chr1	162930728	162930729	chunk0012_367_1	62.59537	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	162930684	162930800	-86025622	-	MIR3	SINE	MIR	-46	162	48	2
chr1	162993224	162993225	chunk0012_369_1	5.30168	AR_DHT_Control	chr1	162993156	162993567	-85962855	-	L2c	LINE	L2	-42	3345	2937	2
chr1	163290335	163290336	chunk0012_375_1	22.78274	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	163289759	163290380	-85666042	+	LTR9D	LTR	ERV1	1	645	0	2
chr1	163336360	163336361	chunk0012_380_1	13.2796	AR_DHT_Control	chr1	163336180	163336548	-85619874	-	L1MEc	LINE	L1	-5975	425	44	2
chr1	163365893	163365894	chunk0012_381_1	8.46955	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	163365468	163366116	-85590306	-	L1ME3C	LINE	L1	-253	5870	5188	2
chr1	163381959	163381960	chunk0012_383_1	10.15594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	163381663	163382103	-85574319	+	L2c	LINE	L2	2948	3386	-1	2
chr1	163382993	163382994	chunk0012_384_1	6.9834	AR_DHT_Control	chr1	163382255	163383256	-85573166	-	L2a	LINE	L2	0	3426	2220	2
chr1	163537997	163537998	chunk0012_385_1	7.40938	AR_DHT_Control	chr1	163537984	163538180	-85418242	+	MIR	SINE	MIR	22	219	-11	2
chr1	163617128	163617129	chunk0012_394_1	123.45681	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	163617008	163617897	-85338525	-	L2a	LINE	L2	0	3426	2299	2
chr1	163635675	163635676	chunk0012_395_1	71.896	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	163635456	163635849	-85320573	-	L1MB3	LINE	L1	-2	6181	5779	2
chr1	163648536	163648537	chunk0012_396_1	41.9036	AR_DHT_Control	chr1	163648433	163648576	-85307846	-	L2a	LINE	L2	-6	3420	3275	2
chr1	163744332	163744333	chunk0012_399_1	13.197	AR_DHT_Control	chr1	163739449	163746076	-85210346	-	L1MA2	LINE	L1	-667	7056	179	2
chr1	163917250	163917251	chunk0012_402_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	163917092	163917624	-85038798	-	L1M2c	LINE	L1	-6206	1360	464	2
chr1	163959528	163959529	chunk0012_403_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	163959199	163960045	-84996377	-	L1M3b	LINE	L1	-5522	1257	499	2
chr1	164016317	164016318	chunk0012_405_1	217.704	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	164016163	164017106	-84939316	+	L1MC3	LINE	L1	6738	7783	-2	2
chr1	164061504	164061505	chunk0012_406_1	7.42871	AR_DHT_Control	chr1	164060953	164061960	-84894462	+	L1PA13	LINE	L1	14	970	-5815	2
chr1	164075749	164075750	chunk0012_407_1	21.26869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	164075257	164077779	-84878643	-	L1MC4	LINE	L1	-873	5341	2721	2
chr1	164101952	164101953	chunk0012_409_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	164100975	164102241	-84854181	-	L1MA9	LINE	L1	-4459	3107	1074	2
chr1	164128441	164128442	chunk0012_410_1	22.526	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	164128075	164128767	-84827655	-	L1M7	LINE	L1	-781	1640	870	2
chr1	164166594	164166595	chunk0012_412_1	48.5358	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	164166560	164172086	-84784336	+	L1PA6	LINE	L1	616	6153	-1	2
chr1	164191111	164191112	chunk0012_413_1	7.72121	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	164191035	164191366	-84765056	+	L1M1	LINE	L1	2518	2857	-4708	2
chr1	164281393	164281394	chunk0012_414_1	7.36432	AR_DHT_Control	chr1	164280991	164281541	-84674881	+	L1MCa	LINE	L1	1	839	-5912	2
chr1	164465932	164465933	chunk0012_416_1	7.36432	AR_DHT_Control	chr1	164465892	164466334	-84490088	-	ERV3-16A3_I-int	LTR	ERVL	-144	5082	4625	2
chr1	164479871	164479872	chunk0012_417_1	10.2531	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	164479852	164480804	-84475618	+	Tigger3b	DNA	TcMar-Tigger	261	1231	0	2
chr1	164831253	164831254	chunk0012_432_1	61.4204	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	164831032	164831371	-84125051	-	L1ME2z	LINE	L1	-2	6442	6110	2
chr1	164943744	164943745	chunk0012_438_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	164941693	164943841	-84012581	-	L1PB3	LINE	L1	-12	6142	4009	2
chr1	164975018	164975019	chunk0012_439_1	19.1542	AR_DHT_Control	chr1	164974617	164975106	-83981316	-	MLT1H2	LTR	ERVL-MaLR	-12	536	10	2
chr1	165001255	165001256	chunk0012_440_1	22.53094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	165001108	165001585	-83954837	-	L2b	LINE	L2	-3	3423	2931	2
chr1	165055123	165055124	chunk0012_443_1	70.1525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	165054749	165055239	-83901183	+	Charlie29a	DNA	hAT-Charlie	185	719	0	2
chr1	165069942	165069943	chunk0012_448_1	190.17212	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	165069854	165070055	-83886367	-	MER58A	DNA	hAT-Charlie	0	224	2	2
chr1	165092663	165092664	chunk0012_449_1	6.04605	AR_DHT_Control	chr1	165092582	165093558	-83862864	+	LTR5B	LTR	ERVK	1	1002	0	2
chr1	165093386	165093387	chunk0012_450_1	12.9588	AR_DHT_Control	chr1	165092582	165093558	-83862864	+	LTR5B	LTR	ERVK	1	1002	0	2
chr1	165106503	165106504	chunk0012_451_1	9.21264	AR_DHT_Control	chr1	165103239	165108433	-83847989	-	L1PA6	LINE	L1	-14	6140	981	2
chr1	165173628	165173629	chunk0012_452_1	12.3317	AR_DHT_Control	chr1	165173192	165173799	-83782623	+	MLT1E3	LTR	ERVL-MaLR	57	674	-6	2
chr1	165281628	165281629	chunk0012_459_1	223.4664	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	165281568	165281726	-83674696	+	MamRTE1	LINE	RTE-BovB	3585	3765	-47	2
chr1	165495062	165495063	chunk0012_462_1	4.06191	AR_DHT_Control	chr1	165494897	165495277	-83461145	-	L2b	LINE	L2	-945	2474	2028	2
chr1	165617598	165617599	chunk0012_467_1	8.13752	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	165617576	165617669	-83338753	-	MER20	DNA	hAT-Charlie	0	219	127	2
chr1	165643251	165643252	chunk0013_1_1	20.1377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	165643103	165643436	-83312986	-	L1ME4a	LINE	L1	-184	5940	5593	2
chr1	165689401	165689402	chunk0013_5_1	19.6337	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	165689200	165689611	-83266811	+	LTR40A1	LTR	ERVL	2	404	-180	2
chr1	165838074	165838075	chunk0013_15_1	9.18939	AR_DHT_Control	chr1	165838071	165838341	-83118081	+	L2a	LINE	L2	2598	2878	-541	2
chr1	165878798	165878799	chunk0013_17_1	37.79536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	165878642	165879308	-83077114	-	L1MC1	LINE	L1	-510	5823	5165	2
chr1	166235490	166235491	chunk0013_24_1	6.58746	AR_DHT_Control	chr1	166234694	166236061	-82720361	-	L1PA14	LINE	L1	-4838	1851	1	2
chr1	166458649	166458650	chunk0013_25_1	5.20246	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	166458571	166459162	-82497260	+	MLT1G1	LTR	ERVL-MaLR	1	576	-3	2
chr1	166554396	166554397	chunk0013_26_1	19.7687	AR_DHT_Control	chr1	166553457	166554888	-82401534	+	MER51-int	LTR	ERV1	77	1713	-6103	2
chr1	166609927	166609928	chunk0013_28_1	84.66964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	166606444	166609934	-82346488	-	HERVK-int	LTR	ERVK	-89	7447	3882	2
chr1	166698557	166698558	chunk0013_33_1	7.27655	AR_DHT_Control	chr1	166698291	166698607	-82257815	+	L1ME4b	LINE	L1	438	763	-129	2
chr1	166807460	166807461	chunk0013_34_1	8.84892	AR_DHT_Control	chr1	166807329	166807718	-82148704	-	MLT1A1	LTR	ERVL-MaLR	0	408	4	2
chr1	166825717	166825718	chunk0013_35_1	23.47342	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	166825699	166826795	-82129627	-	L2a	LINE	L2	-1	3425	2091	2
chr1	166978596	166978597	chunk0013_43_1	15.6094	AR_DHT_Control	chr1	166978505	166978677	-81977745	+	MER5A	DNA	hAT-Charlie	14	186	-3	2
chr1	167191580	167191581	chunk0013_55_1	64.5721	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	167191548	167191834	-81764588	+	L1ME4b	LINE	L1	593	885	-7	2
chr1	167211535	167211536	chunk0013_59_1	20.13443	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	167211476	167211727	-81744695	+	L1MC4a	LINE	L1	5674	5928	-1954	2
chr1	167360534	167360535	chunk0013_63_1	18.0693	AR_DHT_Control	chr1	167359205	167361871	-81594551	-	L1PA17	LINE	L1	-14	6152	3448	2
chr1	167544716	167544717	chunk0013_74_1	289.6415	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	167544588	167544870	-81411552	+	MIR	SINE	MIR	3	262	0	2
chr1	167594980	167594981	chunk0013_76_1	25.5243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	167594883	167595285	-81361137	-	MER57B1	LTR	ERV1	0	401	2	2
chr1	167671992	167671993	chunk0013_86_1	66.48892	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	167671930	167672308	-81284114	+	L2a	LINE	L2	2961	3412	-14	2
chr1	167679056	167679057	chunk0013_88_1	12.6738	AR_DHT_Control	chr1	167678135	167679110	-81277312	+	L2a	LINE	L2	2233	3378	-48	2
chr1	167737462	167737463	chunk0013_98_1	7.34658	AR_DHT_Control	chr1	167737461	167737694	-81218728	-	MamRep605	LTR?	LTR?	-237	612	367	2
chr1	167748786	167748787	chunk0013_99_1	5.04058	AR_DHT_Control	chr1	167747736	167748801	-81207621	-	L1MB7	LINE	L1	0	6184	4968	2
chr1	167750003	167750004	chunk0013_100_1	52.3345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	167749787	167750064	-81206358	+	Tigger15a	DNA	TcMar-Tigger	230	529	-186	2
chr1	167793924	167793925	chunk0013_103_1	15.1066	AR_DHT_Control	chr1	167793816	167794017	-81162405	+	L4_A_Mam	LINE	RTE-X	4673	4871	-119	2
chr1	167876734	167876735	chunk0013_110_1	23.5114	AR_DHT_Control	chr1	167876699	167876963	-81079459	+	MLT1H2	LTR	ERVL-MaLR	3	327	-222	2
chr1	167911489	167911490	chunk0013_112_1	49.9488	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	167911208	167911779	-81044643	+	LTR10C	LTR	ERV1	1	591	0	2
chr1	167926841	167926842	chunk0013_113_1	88.4187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	167926761	167927052	-81029370	+	L2c	LINE	L2	3007	3329	-58	2
chr1	167932919	167932920	chunk0013_117_1	14.7139	AR_DHT_Control	chr1	167932837	167933040	-81023382	-	L4_A_Mam	LINE	RTE-X	-663	4327	4127	2
chr1	167943723	167943724	chunk0013_119_1	7.3267	AR_DHT_Control	chr1	167943631	167943846	-81012576	-	L1MA4A	LINE	L1	-260	6745	6533	2
chr1	167959513	167959514	chunk0013_122_1	17.1928	AR_DHT_Control	chr1	167958724	167960293	-80996129	-	L1MC1	LINE	L1	-17	6491	4926	2
chr1	167966165	167966166	chunk0013_123_1	22.4329	AR_DHT_Control	chr1	167965934	167966251	-80990171	-	L1MC1	LINE	L1	-6191	317	3	2
chr1	168027093	168027094	chunk0013_124_1	7.80475	AR_DHT_Control	chr1	168026342	168027221	-80929201	-	L2	LINE	L2	-567	2852	1909	2
chr1	168107902	168107903	chunk0013_127_1	7.0729	AR_DHT_Control	chr1	168107678	168107953	-80848469	+	L1MC4a	LINE	L1	5329	5609	-2273	2
chr1	168159560	168159561	chunk0013_131_1	5.69781	AR_DHT_Control	chr1	168159211	168161932	-80794490	-	L1MA5A	LINE	L1	-3222	4340	906	2
chr1	168279326	168279327	chunk0013_136_1	8.80746	AR_DHT_Control	chr1	168278843	168279735	-80676687	+	L2b	LINE	L2	2436	3359	-67	2
chr1	168297368	168297369	chunk0013_138_1	4.20062	AR_DHT_Control	chr1	168297270	168297376	-80659046	+	L2a	LINE	L2	3316	3426	0	2
chr1	168405994	168405995	chunk0013_143_1	14.11683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	168405930	168406047	-80550375	-	MLT1J	LTR	ERVL-MaLR	-7	505	391	2
chr1	168492097	168492098	chunk0013_145_1	87.2993	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	168491968	168492244	-80464178	-	CR1_Mam	LINE	CR1	-587	1617	1344	2
chr1	168560533	168560534	chunk0013_147_1	130.51161	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	168559710	168561212	-80395210	+	L1MC3	LINE	L1	4751	6333	0	2
chr1	168606434	168606435	chunk0013_149_1	15.20543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	168606016	168606731	-80349691	+	L1MB4	LINE	L1	5451	6180	0	2
chr1	168693344	168693345	chunk0013_159_1	164.72182	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	168693299	168693425	-80262997	+	L2c	LINE	L2	3229	3377	-10	2
chr1	168759347	168759348	chunk0013_168_1	33.9725	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	168759165	168759362	-80197060	-	MIRb	SINE	MIR	-27	241	54	2
chr1	168861893	168861894	chunk0013_174_1	55.9606	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	168861848	168861959	-80094463	+	Tigger15a	DNA	TcMar-Tigger	126	248	-467	2
chr1	168926480	168926481	chunk0013_179_1	9.07871	AR_DHT_Control	chr1	168926375	168926755	-80029667	+	MER119	DNA	hAT-Charlie	31	422	-161	2
chr1	168960492	168960493	chunk0013_180_1	12.44567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	168960366	168960508	-79995914	+	MIRb	SINE	MIR	129	257	-11	2
chr1	169059373	169059374	chunk0013_184_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169059362	169059387	-79897035	+	(T)n	Simple_repeat	Simple_repeat	1	25	0	2
chr1	169161352	169161353	chunk0013_191_1	20.0638	AR_DHT_Control	chr1	169161319	169161417	-79795005	+	MamRep564	Unknown	Unknown	194	288	-69	2
chr1	169185777	169185778	chunk0013_192_1	81.0389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169185523	169185813	-79770609	+	L2b	LINE	L2	3047	3411	-15	2
chr1	169224850	169224851	chunk0013_196_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169224722	169225009	-79731413	-	L2c	LINE	L2	0	3426	3136	2
chr1	169238629	169238630	chunk0013_197_1	9.23066	AR_DHT_Control	chr1	169238516	169239067	-79717355	+	Charlie29a	DNA	hAT-Charlie	117	687	-32	2
chr1	169250995	169250996	chunk0013_201_1	26.27302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	169247488	169251572	-79704850	-	L1PB3	LINE	L1	0	6870	2772	2
chr1	169358254	169358255	chunk0013_203_1	6.35715	AR_DHT_Control	chr1	169358219	169358410	-79598012	-	MIRc	SINE	MIR	-1	267	57	2
chr1	169383612	169383613	chunk0013_204_1	11.4842	AR_DHT_Control	chr1	169383154	169383737	-79572685	+	L2a	LINE	L2	1471	2192	-1227	2
chr1	169493382	169493383	chunk0013_216_1	26.5192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	169492738	169493457	-79462965	+	L2a	LINE	L2	2660	3425	-1	2
chr1	169555712	169555713	chunk0013_228_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169555666	169555770	-79400652	+	MIR	SINE	MIR	107	213	-49	2
chr1	169674108	169674109	chunk0013_243_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169673867	169674128	-79282294	-	MIRb	SINE	MIR	0	268	7	2
chr1	169685793	169685794	chunk0013_245_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	169683479	169686281	-79270141	+	HERVH-int	LTR	ERV1	1	2983	-4730	2
chr1	169741388	169741389	chunk0013_247_1	6.42872	AR_DHT_Control	chr1	169741201	169741427	-79214995	-	MIRb	SINE	MIR	-11	257	11	2
chr1	169765111	169765112	chunk0013_248_1	49.4395	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	169764781	169765571	-79190851	+	L1MD2	LINE	L1	5537	6340	-19	2
chr1	169872529	169872530	chunk0013_254_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	169871518	169873077	-79083345	+	THE1B-int	LTR	ERVL-MaLR	1	1580	0	2
chr1	169901255	169901256	chunk0013_255_1	5.69781	AR_DHT_Control	chr1	169901250	169901529	-79054893	-	AluJr4	SINE	Alu	-13	299	18	2
chr1	170011509	170011510	chunk0013_258_1	15.79048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	170011468	170011561	-78944861	+	(ATATAAT)n	Simple_repeat	Simple_repeat	1	99	0	2
chr1	170088711	170088712	chunk0013_261_1	9.21264	AR_DHT_Control	chr1	170088470	170088802	-78867620	-	HAL1M8	LINE	L1	0	2991	2659	2
chr1	170113928	170113929	chunk0013_266_1	71.26796	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	170113787	170113965	-78842457	+	L2c	LINE	L2	3196	3377	-10	2
chr1	170221894	170221895	chunk0013_268_1	6.40902	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	170221881	170222071	-78734351	-	MamGypsy2-LTR	LTR	Gypsy	0	183	3	2
chr1	170477658	170477659	chunk0013_276_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	170476924	170478016	-78478406	+	L1ME1	LINE	L1	5298	6352	0	2
chr1	170531951	170531952	chunk0013_277_1	6.22495	AR_DHT_Control	chr1	170531951	170531984	-78424438	+	GA-rich	Low_complexity	Low_complexity	1	33	0	2
chr1	170597578	170597579	chunk0013_278_1	5.3309	AR_DHT_Control	chr1	170596818	170598490	-78357932	-	L1M4a1	LINE	L1	-804	1775	6	2
chr1	170775336	170775337	chunk0013_280_1	20.72994	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	170775255	170775380	-78181042	+	MIRc	SINE	MIR	94	230	-38	2
chr1	170894794	170894795	chunk0013_281_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	170894767	170894853	-78061569	+	L2c	LINE	L2	3300	3379	-8	2
chr1	170934684	170934685	chunk0013_282_1	59.5116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	170934617	170934888	-78021534	+	L1MB7	LINE	L1	6389	6674	-8	2
chr1	170941348	170941349	chunk0013_286_1	14.10158	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	170937822	170942366	-78014056	-	ERVL-B4-int	LTR	ERVL	-412	5302	745	2
chr1	171017785	171017786	chunk0013_288_1	7.57442	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	171017138	171018900	-77937522	+	L1PA8	LINE	L1	3	1796	-4687	2
chr1	171119432	171119433	chunk0013_291_1	5.20246	AR_DHT_Control	chr1	171119369	171119466	-77836956	-	MER20B	DNA	hAT-Charlie	0	783	689	2
chr1	171142728	171142729	chunk0013_294_1	6.29759	AR_DHT_Control	chr1	171142574	171142762	-77813660	+	MER5A	DNA	hAT-Charlie	1	189	0	2
chr1	171153447	171153448	chunk0013_296_1	172.8457	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	171153323	171153456	-77802966	-	L2a	LINE	L2	0	3426	3284	2
chr1	171219447	171219448	chunk0013_299_1	33.1063	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	171219224	171219815	-77736607	+	LTR10C	LTR	ERV1	1	591	0	2
chr1	171224414	171224415	chunk0013_300_1	22.7661	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	171224222	171224819	-77731603	+	LTR10C	LTR	ERV1	1	589	-2	2
chr1	171251135	171251136	chunk0013_303_1	27.61299	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	171250907	171251403	-77705019	+	LTR22B	LTR	ERVK	5	489	-3	2
chr1	171353695	171353696	chunk0013_313_1	73.1717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	171353333	171353761	-77602661	+	L2a	LINE	L2	2817	3352	-74	2
chr1	171418736	171418737	chunk0013_317_1	89.9061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	171418648	171418750	-77537672	-	U6	snRNA	snRNA	-5	102	1	2
chr1	171465811	171465812	chunk0013_320_1	35.76296	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	171465278	171465980	-77490442	-	MER50	LTR	ERV1	-12	722	1	2
chr1	171477993	171477994	chunk0013_321_1	8.64947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	171477922	171478196	-77478226	+	LTR26B	LTR	ERV1	193	604	0	2
chr1	171555883	171555884	chunk0013_325_1	30.7462	AR_DHT_Control	chr1	171550468	171556557	-77399865	-	L1PA6	LINE	L1	0	6154	5	2
chr1	171583709	171583710	chunk0013_328_1	5.60066	AR_DHT_Control	chr1	171583272	171583864	-77372558	-	Tigger3b	DNA	TcMar-Tigger	-604	627	1	2
chr1	171641079	171641080	chunk0013_329_1	4.15945	AR_DHT_Control	chr1	171640855	171641230	-77315192	+	L1MC1	LINE	L1	5939	6332	-1	2
chr1	171671776	171671777	chunk0013_332_1	6.17841	AR_DHT_Control	chr1	171671717	171672274	-77284148	-	L1ME1	LINE	L1	-467	5712	5172	2
chr1	171721391	171721392	chunk0013_333_1	9.38217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	171720406	171722925	-77233497	+	L1PA5	LINE	L1	3159	5662	-492	2
chr1	171913676	171913677	chunk0013_337_1	20.54691	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	171913672	171913678	-77042744	+	(TCTT)n	Simple_repeat	Simple_repeat	1	26	-40	2
chr1	171963089	171963090	chunk0013_340_1	60.5474	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	171962845	171963686	-76992736	+	L1MC1	LINE	L1	5452	6315	-18	2
chr1	172069711	172069712	chunk0013_342_1	41.1731	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	172069676	172069712	-76886710	+	MIRc	SINE	MIR	5	39	-229	2
chr1	172158180	172158181	chunk0013_345_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172157910	172158283	-76798139	-	L2a	LINE	L2	-1	3425	2925	2
chr1	172164245	172164246	chunk0013_346_1	6.01382	AR_DHT_Control	chr1	172164186	172164247	-76792175	+	(TTTTCT)n	Simple_repeat	Simple_repeat	1	63	0	2
chr1	172178081	172178082	chunk0013_348_1	76.7482	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	172177914	172178258	-76778164	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr1	172201588	172201589	chunk0013_350_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172195907	172201965	-76754457	-	L1PA14	LINE	L1	-5	8151	2039	2
chr1	172226027	172226028	chunk0013_351_1	44.52297	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172225782	172226180	-76730242	-	L1ME3G	LINE	L1	-254	670	340	2
chr1	172261635	172261636	chunk0013_354_1	5.20246	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172261112	172262754	-76693668	-	L1MA4A	LINE	L1	-5104	2462	718	2
chr1	172341956	172341957	chunk0013_356_1	30.2826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	172341869	172342732	-76613690	+	L1PREC2	LINE	L1	5261	6152	-8	2
chr1	172356809	172356810	chunk0013_359_1	58.7892	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	172356789	172357809	-76598613	+	L1MC4a	LINE	L1	6758	7873	-9	2
chr1	172432245	172432246	chunk0013_365_1	54.80044	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	172431615	172437728	-76518694	+	L1PA6	LINE	L1	1	6136	-18	2
chr1	172490135	172490136	chunk0013_374_1	14.20667	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	172490034	172490370	-76466052	-	MER49	LTR	ERV1	-616	307	1	2
chr1	172544718	172544719	chunk0013_379_1	107.151	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	172544360	172545749	-76410673	-	L2c	LINE	L2	-78	3309	1841	2
chr1	172547120	172547121	chunk0013_382_1	10.011	AR_DHT_Control	chr1	172546917	172547419	-76409003	-	L1ME2	LINE	L1	-19	6145	5626	2
chr1	172680945	172680946	chunk0013_386_1	4.81216	AR_DHT_Control	chr1	172680830	172681027	-76275395	+	LTR33A_	LTR	ERVL	143	351	-180	2
chr1	172727715	172727716	chunk0013_387_1	4.36616	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	172726723	172728737	-76227685	+	L1PA15-16	LINE	L1	4	1950	-4985	2
chr1	172847967	172847968	chunk0013_392_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	172847552	172849787	-76106635	-	LTR19-int	LTR	ERV1	-1121	4465	1738	2
chr1	172879584	172879585	chunk0013_395_1	12.5882	AR_DHT_Control	chr1	172879469	172881589	-76074833	-	L1PA16	LINE	L1	-840	5306	3175	2
chr1	172886287	172886288	chunk0013_396_1	30.5783	AR_DHT_Control	chr1	172886261	172886553	-76069869	-	L1M4b	LINE	L1	-6545	322	44	2
chr1	172905637	172905638	chunk0013_397_1	4.84918	AR_DHT_Control	chr1	172905443	172905822	-76050600	-	LTR16A2	LTR	ERVL	-89	406	3	2
chr1	173035094	173035095	chunk0013_405_1	11.4884	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173033116	173035889	-75920533	+	L1PA7	LINE	L1	3435	6203	-124	2
chr1	173054063	173054064	chunk0013_406_1	23.8513	AR_DHT_Control	chr1	173053991	173054196	-75902226	-	MIRb	SINE	MIR	-27	241	9	2
chr1	173077162	173077163	chunk0013_408_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	173076960	173077500	-75878922	+	L1P4e	LINE	L1	500	1043	-5742	2
chr1	173079423	173079424	chunk0013_409_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	173079108	173079611	-75876811	+	L1PA15	LINE	L1	339	822	-5963	2
chr1	173190828	173190829	chunk0013_415_1	90.47835	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	173190784	173190960	-75765462	+	MIR3	SINE	MIR	9	199	-9	2
chr1	173258057	173258058	chunk0013_417_1	5.98896	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	173257352	173258102	-75698320	-	MER77B	LTR	ERVL	-115	823	39	2
chr1	173288137	173288138	chunk0013_418_1	13.35637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173288057	173288162	-75668260	+	L1ME1	LINE	L1	2467	2572	-3574	2
chr1	173300832	173300833	chunk0013_420_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173300798	173300946	-75655476	+	MIRb	SINE	MIR	26	194	-74	2
chr1	173340011	173340012	chunk0013_421_1	11.6458	AR_DHT_Control	chr1	173339877	173340323	-75616099	+	MLT2B4	LTR	ERVL	1	511	-45	2
chr1	173385111	173385112	chunk0013_423_1	85.7054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	173384688	173385512	-75570910	+	Charlie25	DNA	hAT-Charlie	145	1004	-1520	2
chr1	173427824	173427825	chunk0013_424_1	13.7529	AR_DHT_Control	chr1	173427638	173427953	-75528469	-	Tigger3a	DNA	TcMar-Tigger	-1	347	77	2
chr1	173446013	173446014	chunk0013_425_1	60.8527	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173445612	173446274	-75510148	+	L1MEf	LINE	L1	408	1087	-5328	2
chr1	173452053	173452054	chunk0013_428_1	47.2222	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	173451879	173452056	-75504366	+	ERVL-E-int	LTR	ERVL	647	816	-4851	2
chr1	173459436	173459437	chunk0013_431_1	8.51012	AR_DHT_Control	chr1	173458697	173459468	-75496954	+	L1M5	LINE	L1	2794	3578	-2568	2
chr1	173474216	173474217	chunk0013_432_1	19.7146	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173474080	173474237	-75482185	-	Charlie8	DNA	hAT-Charlie	-1934	494	328	2
chr1	173475245	173475246	chunk0013_435_1	47.64534	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173474424	173475408	-75481014	+	LTR5B	LTR	ERVK	1	1002	0	2
chr1	173482389	173482390	chunk0013_437_1	8.38351	AR_DHT_Control	chr1	173482200	173482497	-75473925	+	L2a	LINE	L2	3066	3425	-1	2
chr1	173590705	173590706	chunk0013_442_1	13.3531	AR_DHT_Control	chr1	173590414	173590894	-75365528	-	MER44B	DNA	TcMar-Tigger	-1	549	68	2
chr1	173744797	173744798	chunk0013_444_1	253.2194	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173743688	173745159	-75211263	-	L1MC4a	LINE	L1	-1875	6075	4509	2
chr1	173805989	173805990	chunk0013_445_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	173805952	173806173	-75150249	-	MER58A	DNA	hAT-Charlie	0	224	4	2
chr1	173876947	173876948	chunk0013_449_1	7.30485	AR_DHT_Control	chr1	173876825	173877181	-75079241	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	2
chr1	173918450	173918451	chunk0013_450_1	8.60744	AR_DHT_Control	chr1	173918422	173918527	-75037895	-	L2a	LINE	L2	-9	3417	3304	2
chr1	174022272	174022273	chunk0013_454_1	6.19807	AR_DHT_Control	chr1	174022261	174022289	-74934133	+	(CTG)n	Simple_repeat	Simple_repeat	1	28	0	2
chr1	174218377	174218378	chunk0014_7_1	62.225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	174218125	174218422	-74738000	+	L2a	LINE	L2	3111	3425	-1	2
chr1	174239531	174239532	chunk0014_9_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	174239321	174239762	-74716660	+	L2a	LINE	L2	2938	3426	0	2
chr1	174290288	174290289	chunk0014_10_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	174289340	174290610	-74665812	-	L1MA9	LINE	L1	-4850	1463	33	2
chr1	174365633	174365634	chunk0014_11_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	174365331	174365931	-74590491	-	L1M1	LINE	L1	-6958	607	19	2
chr1	174376888	174376889	chunk0014_12_1	15.1861	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	174376264	174377546	-74578876	+	L1MD	LINE	L1	3562	4841	-1305	2
chr1	174438297	174438298	chunk0014_15_1	28.0312	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	174438173	174438436	-74517986	-	L1ME2	LINE	L1	-1381	4765	4514	2
chr1	174530418	174530419	chunk0014_21_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	174527505	174530767	-74425655	-	L1MA4A	LINE	L1	-3368	4197	755	2
chr1	174604288	174604289	chunk0014_27_1	9.66837	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	174603476	174604621	-74351801	-	L1M1	LINE	L1	-6366	1199	27	2
chr1	174711800	174711801	chunk0014_28_1	14.6312	AR_DHT_Control	chr1	174711393	174712640	-74243782	+	LTR12C	LTR	ERV1	182	1579	0	2
chr1	174717420	174717421	chunk0014_31_1	9.34288	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	174717127	174717422	-74239000	+	AluJo	SINE	Alu	1	295	-17	2
chr1	174911877	174911878	chunk0014_34_1	24.6973	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	174911835	174912001	-74044421	+	MamSINE1	SINE	tRNA-RTE	60	241	-49	2
chr1	174936215	174936216	chunk0014_36_1	25.79651	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	174936183	174936321	-74020101	+	AluJo	SINE	Alu	2	136	-176	2
chr1	175341972	175341973	chunk0014_54_1	5.48872	AR_DHT_Control	chr1	175341871	175341980	-73614442	-	MamSINE1	SINE	tRNA-RTE	-121	169	67	2
chr1	175798975	175798976	chunk0014_61_1	8.64577	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	175798798	175800076	-73156346	+	L1MA9	LINE	L1	4881	6105	-207	2
chr1	175903965	175903966	chunk0014_62_1	6.18774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	175903612	175904170	-73052252	-	MER67C	LTR	ERV1	-78	633	1	2
chr1	175906654	175906655	chunk0014_63_1	4.76708	AR_DHT_Control	chr1	175906358	175906791	-73049631	-	MER57B2	LTR	ERV1	-1	402	1	2
chr1	175918532	175918533	chunk0014_64_1	11.7067	AR_DHT_Control	chr1	175918347	175918945	-73037477	-	MER67C	LTR	ERV1	-81	630	10	2
chr1	176000365	176000366	chunk0014_65_1	10.1791	AR_DHT_Control	chr1	176000000	176000411	-72956011	-	L1M1	LINE	L1	-884	5262	4841	2
chr1	176051537	176051538	chunk0014_68_1	4.96282	AR_DHT_Control	chr1	176051335	176052371	-72904051	+	Tigger3b	DNA	TcMar-Tigger	56	1231	0	2
chr1	176065523	176065524	chunk0014_70_1	142.1395	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	176065509	176065704	-72890718	+	MER34A	LTR	ERV1	1	185	-386	2
chr1	176194291	176194292	chunk0014_74_1	71.3722	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176194020	176194357	-72762065	+	L1ME1	LINE	L1	2024	2360	-4040	2
chr1	176230197	176230198	chunk0014_75_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	176229151	176230785	-72725637	+	L1PA13	LINE	L1	15	1843	-4942	2
chr1	176379774	176379775	chunk0014_76_1	25.987	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	176379634	176380086	-72576336	-	MLT1C	LTR	ERVL-MaLR	0	467	1	2
chr1	176510312	176510313	chunk0014_80_1	17.81292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176510067	176510804	-72445618	+	L1ME1	LINE	L1	1362	2132	-4268	2
chr1	176567572	176567573	chunk0014_88_1	111.38045	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	176567539	176567792	-72388630	-	L2c	LINE	L2	0	3387	3139	2
chr1	176587075	176587076	chunk0014_89_1	5.9324	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176586344	176587801	-72368621	-	L1PA6	LINE	L1	-28	6103	4647	2
chr1	176595746	176595747	chunk0014_93_1	6.79294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	176595702	176595941	-72360481	-	L2b	LINE	L2	0	3375	3135	2
chr1	176652791	176652792	chunk0014_94_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	176650671	176653033	-72303389	-	L1M3f	LINE	L1	-3962	3603	1253	2
chr1	176717316	176717317	chunk0014_99_1	4.88663	AR_DHT_Control	chr1	176717152	176717678	-72238744	+	MER66C	LTR	ERV1	1	541	-14	2
chr1	176744268	176744269	chunk0014_103_1	7.8637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176744040	176744333	-72212089	-	L1M5	LINE	L1	-3584	2562	2254	2
chr1	176813631	176813632	chunk0014_109_1	28.17951	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	176812771	176815071	-72141351	-	L1PA11	LINE	L1	0	6174	3865	2
chr1	176858727	176858728	chunk0014_111_1	15.65288	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176858703	176858765	-72097657	-	MamSINE1	SINE	tRNA-RTE	-53	237	175	2
chr1	176911830	176911831	chunk0014_113_1	11.2223	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176911033	176912059	-72044363	-	Tigger3b	DNA	TcMar-Tigger	-135	1096	4	2
chr1	176912326	176912327	chunk0014_114_1	7.72091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	176912200	176912525	-72043897	-	MER58B	DNA	hAT-Charlie	-2	339	1	2
chr1	177420143	177420144	chunk0014_119_1	21.17148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	177420026	177420174	-71536248	+	L2b	LINE	L2	3258	3421	-5	2
chr1	177451225	177451226	chunk0014_122_1	14.25713	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	177451201	177451281	-71505141	-	LTR16A	LTR	ERVL	0	451	372	2
chr1	177611343	177611344	chunk0014_128_1	5.73594	AR_DHT_Control	chr1	177611284	177611515	-71344907	+	MIRb	SINE	MIR	23	262	-6	2
chr1	177613408	177613409	chunk0014_129_1	9.38051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	177613353	177614367	-71342055	+	L1MA6	LINE	L1	1793	3249	-4338	2
chr1	177701731	177701732	chunk0014_137_1	96.5639	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	177701412	177702116	-71254306	-	L2a	LINE	L2	0	3426	2639	2
chr1	177956749	177956750	chunk0014_144_1	18.2424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	177956702	177957024	-70999398	+	MER47A	DNA	TcMar-Tigger	31	365	-1	2
chr1	178126112	178126113	chunk0014_148_1	5.08049	AR_DHT_Control	chr1	178125987	178126209	-70830213	-	MIR	SINE	MIR	-1	261	19	2
chr1	178163637	178163638	chunk0014_153_1	17.25246	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	178163260	178164020	-70792402	-	L1MB7	LINE	L1	-942	5204	4387	2
chr1	178198766	178198767	chunk0014_156_1	6.89429	AR_DHT_Control	chr1	178198365	178199441	-70756981	-	L1P2	LINE	L1	-5092	1092	1	2
chr1	178231134	178231135	chunk0014_159_1	4.40478	AR_DHT_Control	chr1	178230550	178231290	-70725132	-	MER50	LTR	ERV1	0	734	1	2
chr1	178288191	178288192	chunk0014_162_1	8.75876	AR_DHT_Control	chr1	178288164	178288258	-70668164	-	MER5C	DNA	hAT-Charlie	-215	98	3	2
chr1	178290216	178290217	chunk0014_164_1	14.83973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	178289791	178290256	-70666166	+	L2a	LINE	L2	2959	3423	-3	2
chr1	178304662	178304663	chunk0014_165_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	178304543	178304699	-70651723	-	L2	LINE	L2	-1386	2033	1878	2
chr1	178331054	178331055	chunk0014_167_1	18.97991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	178330923	178331124	-70625298	-	MIR	SINE	MIR	-32	230	1	2
chr1	178572054	178572055	chunk0014_178_1	6.58746	AR_DHT_Control	chr1	178571799	178572122	-70384300	-	L1M4	LINE	L1	-6449	1068	727	2
chr1	178745577	178745578	chunk0014_187_1	30.5856	AR_DHT_Control	chr1	178744847	178745816	-70210606	+	L1MEc	LINE	L1	4338	5353	-966	2
chr1	178753081	178753082	chunk0014_189_1	47.69969	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	178753068	178753196	-70203226	+	MIRc	SINE	MIR	27	151	-117	2
chr1	178775733	178775734	chunk0014_190_1	7.97574	AR_DHT_Control	chr1	178775628	178775828	-70180594	+	MIRc	SINE	MIR	13	249	-19	2
chr1	178904249	178904250	chunk0014_192_1	6.44773	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	178903355	178905187	-70051235	-	L1PB1	LINE	L1	-2	6149	4323	2
chr1	178951771	178951772	chunk0014_193_1	5.8511	AR_DHT_Control	chr1	178951768	178951968	-70004454	-	L1MC4a	LINE	L1	-940	6942	6739	2
chr1	179012304	179012305	chunk0014_196_1	21.56853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	179011931	179012740	-69943682	+	L1ME3	LINE	L1	5325	6334	0	2
chr1	179128750	179128751	chunk0014_205_1	48.78237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	179128688	179128983	-69827439	-	AluJr4	SINE	Alu	-15	297	2	2
chr1	179205820	179205821	chunk0014_206_1	8.11543	AR_DHT_Control	chr1	179205778	179205887	-69750535	+	L1M5	LINE	L1	4630	4739	-1407	2
chr1	179330055	179330056	chunk0014_214_1	7.77075	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	179330001	179330737	-69625685	-	LTR8B	LTR	ERV1	0	820	1	2
chr1	179399580	179399581	chunk0014_217_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	179399184	179400579	-69555843	+	L1PB1	LINE	L1	4748	6150	-1	2
chr1	179416687	179416688	chunk0014_218_1	8.27376	AR_DHT_Control	chr1	179416545	179416967	-69539455	+	LTR47B2	LTR	ERVL	2	434	0	2
chr1	179484964	179484965	chunk0014_219_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	179483896	179485837	-69470585	+	L1PA13	LINE	L1	11	1917	-4868	2
chr1	179586131	179586132	chunk0014_220_1	35.3053	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	179586107	179586166	-69370256	-	HAL1ME	LINE	L1	-2285	180	122	2
chr1	179658168	179658169	chunk0014_222_1	39.2571	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	179657728	179658254	-69298168	-	L1MA8	LINE	L1	-3	6288	5735	2
chr1	179707840	179707841	chunk0014_224_1	9.19836	AR_DHT_Control	chr1	179707829	179707970	-69248452	-	MIR	SINE	MIR	-14	248	110	2
chr1	179738016	179738017	chunk0014_226_1	7.86105	AR_DHT_Control	chr1	179737977	179738396	-69218026	+	L1MA5	LINE	L1	5845	6298	-2	2
chr1	179953967	179953968	chunk0014_239_1	5.44099	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	179953875	179954160	-69002262	-	L2b	LINE	L2	-2	3373	3073	2
chr1	179954778	179954779	chunk0014_241_1	6.13915	AR_DHT_Control	chr1	179954760	179954795	-69001627	+	(CGCAGC)n	Simple_repeat	Simple_repeat	1	36	0	2
chr1	179978500	179978501	chunk0014_243_1	161.212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	179978261	179978764	-68977658	-	L1MA5A	LINE	L1	-6	6291	5769	2
chr1	180073975	180073976	chunk0014_250_1	102.8165	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180073953	180074004	-68882418	+	(TT)n	Simple_repeat	Simple_repeat	1	51	0	2
chr1	180126903	180126904	chunk0014_256_1	18.57009	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180126769	180126986	-68829436	-	MIR	SINE	MIR	-1	261	32	2
chr1	180137981	180137982	chunk0014_260_1	15.3742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	180137821	180137996	-68818426	-	MER58A	DNA	hAT-Charlie	0	224	34	2
chr1	180301781	180301782	chunk0014_268_1	45.24483	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180301248	180302041	-68654381	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	245	2
chr1	180311979	180311980	chunk0014_270_1	36.6936	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180311967	180312744	-68643678	-	L1ME3A	LINE	L1	-1378	4768	3943	2
chr1	180381296	180381297	chunk0014_273_1	9.8425	AR_DHT_Control	chr1	180380278	180381827	-68574595	+	L1MA4A	LINE	L1	2969	4514	-3048	2
chr1	180550985	180550986	chunk0014_282_1	4.21023	AR_DHT_Control	chr1	180550948	180551310	-68405112	-	MER97d	DNA	hAT-Tip100	-18	1187	803	2
chr1	180589523	180589524	chunk0014_285_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180589519	180589551	-68366871	+	A-rich	Low_complexity	Low_complexity	1	33	0	2
chr1	180631100	180631101	chunk0014_289_1	10.9706	AR_DHT_Control	chr1	180630815	180631109	-68325313	+	AluJo	SINE	Alu	1	293	-19	2
chr1	180664117	180664118	chunk0014_291_1	9.44294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	180661900	180664745	-68291677	-	L1MA3	LINE	L1	-4227	3338	510	2
chr1	180666280	180666281	chunk0014_292_1	6.35715	AR_DHT_Control	chr1	180665963	180666918	-68289504	-	L1M4c	LINE	L1	-1151	5487	4549	2
chr1	180839139	180839140	chunk0014_299_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	180839024	180839562	-68116860	-	Charlie2a	DNA	hAT-Charlie	-712	2149	1583	2
chr1	180987162	180987163	chunk0014_300_1	6.26417	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	180986956	180987545	-67968877	+	L2a	LINE	L2	2727	3426	0	2
chr1	181251195	181251196	chunk0014_313_1	15.49761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	181249801	181254226	-67702196	+	HERVK11-int	LTR	ERVK	3546	7952	-1	2
chr1	181259253	181259254	chunk0014_315_1	32.6746	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	181259186	181259501	-67696921	+	MER127	DNA	TcMar-Tigger	28	350	-14	2
chr1	181359220	181359221	chunk0014_319_1	389.7027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	181359117	181359528	-67596894	-	L2c	LINE	L2	-2	3385	2919	2
chr1	181421924	181421925	chunk0014_322_1	6.57411	AR_DHT_Control	chr1	181421368	181422336	-67534086	+	L2a	LINE	L2	2214	3422	-4	2
chr1	181876551	181876552	chunk0014_324_1	7.77075	AR_DHT_Control	chr1	181871890	181878436	-67077986	+	L1PB1	LINE	L1	255	6866	-1	2
chr1	181881731	181881732	chunk0014_326_1	23.61365	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	181881615	181882223	-67074199	+	L1MD	LINE	L1	2582	3166	-2980	2
chr1	182029480	182029481	chunk0014_327_1	10.0039	AR_DHT_Control	chr1	182028925	182029560	-66926862	+	L2b	LINE	L2	2539	3298	-77	2
chr1	182066612	182066613	chunk0014_329_1	6.9063	AR_DHT_Control	chr1	182066598	182066827	-66889595	+	MIRb	SINE	MIR	27	268	0	2
chr1	182139393	182139394	chunk0014_332_1	13.3198	AR_DHT_Control	chr1	182139366	182139461	-66816961	-	L2c	LINE	L2	-308	3079	2976	2
chr1	182203411	182203412	chunk0014_338_1	61.8773	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182202964	182203587	-66752835	+	MER20B	DNA	hAT-Charlie	37	751	-32	2
chr1	182228431	182228432	chunk0014_342_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182228052	182228626	-66727796	+	L3	LINE	CR1	665	1270	-2829	2
chr1	182270927	182270928	chunk0014_346_1	70.0295	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182270736	182271793	-66684629	+	L1MC3	LINE	L1	6748	7784	-1	2
chr1	182278381	182278382	chunk0014_348_1	12.5439	AR_DHT_Control	chr1	182278293	182279405	-66677017	-	L2a	LINE	L2	-1	3425	2128	2
chr1	182347284	182347285	chunk0014_354_1	11.4187	AR_DHT_Control	chr1	182346787	182347624	-66608798	-	HAL1M8	LINE	L1	-2088	903	80	2
chr1	182363776	182363777	chunk0014_355_1	13.0642	AR_DHT_Control	chr1	182363470	182363997	-66592425	-	L1ME4b	LINE	L1	-74	818	246	2
chr1	182410678	182410679	chunk0014_361_1	74.0038	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	182410249	182410817	-66545605	+	ERVL-E-int	LTR	ERVL	589	1150	-4517	2
chr1	182447668	182447669	chunk0014_363_1	5.81334	AR_DHT_Control	chr1	182447611	182447728	-66508694	+	ERVL-B4-int	LTR	ERVL	1440	1559	-4108	2
chr1	182484959	182484960	chunk0014_364_1	5.40372	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	182483731	182485450	-66470972	-	L1M2a	LINE	L1	-5651	1517	3	2
chr1	182485881	182485882	chunk0014_365_1	15.7243	AR_DHT_Control	chr1	182485720	182486039	-66470383	+	MER58B	DNA	hAT-Charlie	5	340	-1	2
chr1	182578275	182578276	chunk0014_366_1	6.6351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182577522	182578500	-66377922	+	L1PB4	LINE	L1	4531	5520	-636	2
chr1	182579119	182579120	chunk0014_367_1	10.08909	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182578753	182579224	-66377198	+	L1PB4	LINE	L1	5659	6144	-12	2
chr1	182681049	182681050	chunk0014_377_1	50.1365	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	182680873	182681064	-66275358	+	MIRb	SINE	MIR	4	210	-58	2
chr1	182703870	182703871	chunk0014_379_1	32.3305	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182703622	182703881	-66252541	-	Tigger19a	DNA	TcMar-Tigger	-9	314	38	2
chr1	182732417	182732418	chunk0014_384_1	17.45325	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	182732352	182732427	-66223995	+	L2a	LINE	L2	3351	3426	0	2
chr1	182743857	182743858	chunk0014_386_1	13.01709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	182743788	182743883	-66212539	+	(AC)n	Simple_repeat	Simple_repeat	1	98	0	2
chr1	182780631	182780632	chunk0014_392_1	67.8432	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	182779621	182780798	-66175624	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	2
chr1	182893565	182893566	chunk0014_398_1	7.47918	AR_DHT_Control	chr1	182893525	182893773	-66062649	-	MER50	LTR	ERV1	-500	234	1	2
chr1	182911535	182911536	chunk0014_399_1	10.3593	AR_DHT_Control	chr1	182911189	182911930	-66044492	+	L1MB5	LINE	L1	835	1580	-5937	2
chr1	182969485	182969486	chunk0014_401_1	254.3553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	182969476	182969695	-65986727	-	MIR	SINE	MIR	-1	267	12	2
chr1	182991287	182991288	chunk0014_404_1	43.2105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	182991261	182991431	-65964991	+	UCON4	Unknown	Unknown	127	280	-23	2
chr1	183030236	183030237	chunk0014_407_1	8.35991	AR_DHT_Control	chr1	183029954	183030293	-65926129	+	MER58B	DNA	hAT-Charlie	3	341	0	2
chr1	183060634	183060635	chunk0014_410_1	65.39279	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	183060448	183060752	-65895670	+	L2c	LINE	L2	3108	3387	0	2
chr1	183069981	183069982	chunk0014_412_1	18.73676	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	183069879	183069997	-65886425	-	L2c	LINE	L2	-280	3107	2982	2
chr1	183155859	183155860	chunk0014_418_1	64.40576	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	183155670	183156476	-65799946	+	Tigger2b_Pri	DNA	TcMar-Tigger	259	1066	-2	2
chr1	183480629	183480630	chunk0014_429_1	9.19836	AR_DHT_Control	chr1	183480557	183480730	-65475692	-	L2c	LINE	L2	0	3387	3196	2
chr1	183629915	183629916	chunk0014_434_1	67.6238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	183629719	183630168	-65326254	-	L1MB4	LINE	L1	-9	6171	5713	2
chr1	183685021	183685022	chunk0014_438_1	19.11181	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	183684427	183685043	-65271379	-	L1PA7	LINE	L1	-5833	628	11	2
chr1	183753576	183753577	chunk0014_442_1	15.4338	AR_DHT_Control	chr1	183753387	183753812	-65202610	-	LTR40c	LTR	ERVL	0	462	1	2
chr1	183789809	183789810	chunk0014_443_1	8.35541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	183789690	183789826	-65166596	-	MLT1J	LTR	ERVL-MaLR	0	512	374	2
chr1	183866341	183866342	chunk0014_448_1	12.25286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	183866224	183867752	-65088670	-	L2a	LINE	L2	0	3426	1683	2
chr1	184073853	184073854	chunk0015_1_1	24.68747	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	184073715	184073884	-64882538	-	MER58A	DNA	hAT-Charlie	-4	220	52	2
chr1	184085409	184085410	chunk0015_10_1	24.9807	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	184085354	184085454	-64870968	+	L2a	LINE	L2	3298	3421	-5	2
chr1	184171943	184171944	chunk0015_11_1	8.80746	AR_DHT_Control	chr1	184171858	184171947	-64784475	-	HAL1ME	LINE	L1	-1160	1305	1203	2
chr1	184180542	184180543	chunk0015_12_1	9.45492	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	184180394	184180548	-64775874	+	MER2	DNA	TcMar-Tigger	207	345	0	2
chr1	184276659	184276660	chunk0015_15_1	51.5321	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	184274504	184276866	-64679556	+	L1MA3	LINE	L1	4500	6305	0	2
chr1	184368323	184368324	chunk0015_25_1	24.7188	AR_DHT_Control	chr1	184367899	184368374	-64588048	+	MLT1C	LTR	ERVL-MaLR	1	467	0	2
chr1	184402833	184402834	chunk0015_27_1	19.91507	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	184402793	184402961	-64553461	+	L1M5	LINE	L1	5422	5598	-644	2
chr1	184423032	184423033	chunk0015_32_1	368.1065	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	184422940	184423170	-64533252	+	MIRb	SINE	MIR	13	268	0	2
chr1	184459621	184459622	chunk0015_38_1	7.34658	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	184459621	184459862	-64496560	-	L2c	LINE	L2	-23	3364	3088	2
chr1	184494266	184494267	chunk0015_41_1	82.7159	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	184493918	184494563	-64461859	-	L2a	LINE	L2	-2	3424	2640	2
chr1	184527648	184527649	chunk0015_44_1	19.19975	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	184527648	184527893	-64428529	+	MIRb	SINE	MIR	5	259	-9	2
chr1	184675459	184675460	chunk0015_64_1	4.96282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	184674925	184675601	-64280821	+	L1MA5A	LINE	L1	4605	5297	-1000	2
chr1	184705524	184705525	chunk0015_67_1	70.4897	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	184705340	184705561	-64250861	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr1	184743671	184743672	chunk0015_69_1	27.30555	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	184743631	184744247	-64212175	+	L1ME1	LINE	L1	4685	5310	-836	2
chr1	184801706	184801707	chunk0015_76_1	7.921	AR_DHT_Control	chr1	184801522	184801730	-64154692	+	L2b	LINE	L2	3073	3286	-89	2
chr1	185011302	185011303	chunk0015_91_1	230.9387	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	185011281	185011593	-63944829	-	L2a	LINE	L2	-10	3416	3052	2
chr1	185035311	185035312	chunk0015_93_1	8.79298	AR_DHT_Control	chr1	185035302	185035628	-63920794	-	L2	LINE	L2	-952	2467	2142	2
chr1	185068547	185068548	chunk0015_98_1	11.3663	AR_DHT_Control	chr1	185068278	185068760	-63887662	+	MLT1D	LTR	ERVL-MaLR	1	505	0	2
chr1	185073075	185073076	chunk0015_99_1	17.34177	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	185073008	185073285	-63883137	-	L1ME3G	LINE	L1	-2068	5814	5637	2
chr1	185164498	185164499	chunk0015_108_1	15.248	AR_DHT_Control	chr1	185163693	185165443	-63790979	-	Tigger1	DNA	TcMar-Tigger	-625	1793	4	2
chr1	185292532	185292533	chunk0015_115_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	185292468	185292774	-63663648	-	AluSz	SINE	Alu	-11	301	1	2
chr1	185317270	185317271	chunk0015_116_1	4.31195	AR_DHT_Control	chr1	185317243	185317318	-63639104	+	(GCC)n	Simple_repeat	Simple_repeat	1	76	0	2
chr1	185358883	185358884	chunk0015_121_1	12.32763	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	185358277	185359739	-63596683	+	L1P4a	LINE	L1	41	1605	-4898	2
chr1	185490861	185490862	chunk0015_127_1	18.55535	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	185490845	185490956	-63465466	-	L1ME4a	LINE	L1	-13	6111	5990	2
chr1	185516543	185516544	chunk0015_128_1	25.7465	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	185516267	185517343	-63439079	+	LTR49-int	LTR	ERV1	1143	2239	-4400	2
chr1	185545299	185545300	chunk0015_131_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	185545293	185545382	-63411040	-	MER103C	DNA	hAT-Charlie	-141	156	69	2
chr1	185627473	185627474	chunk0015_134_1	96.21752	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	185627365	185627970	-63328452	+	L1ME5	LINE	L1	5735	6181	-13	2
chr1	185697019	185697020	chunk0015_136_1	52.0344	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	185696913	185697036	-63259386	+	L2b	LINE	L2	3241	3375	0	2
chr1	186082404	186082405	chunk0015_143_1	8.62865	AR_DHT_Control	chr1	186082217	186082650	-62873772	-	MLT1H	LTR	ERVL-MaLR	-13	476	1	2
chr1	186309781	186309782	chunk0015_146_1	5.60881	AR_DHT_Control	chr1	186309752	186309790	-62646632	+	(TTTTG)n	Simple_repeat	Simple_repeat	1	39	0	2
chr1	186424752	186424753	chunk0015_152_1	17.8382	AR_DHT_Control	chr1	186424511	186425068	-62531354	-	MLT1G1	LTR	ERVL-MaLR	-6	573	4	2
chr1	186566550	186566551	chunk0015_163_1	61.4816	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	186566488	186566746	-62389676	+	L2c	LINE	L2	3087	3387	0	2
chr1	186568454	186568455	chunk0015_164_1	26.72251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	186567986	186568491	-62387931	+	L2a	LINE	L2	2851	3426	0	2
chr1	187156919	187156920	chunk0015_180_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187155827	187157069	-61799353	-	L1MC1	LINE	L1	-1888	4433	3280	2
chr1	187172430	187172431	chunk0015_181_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	187171448	187172769	-61783653	-	L1PB4	LINE	L1	-5656	1197	1	2
chr1	187209728	187209729	chunk0015_185_1	58.6608	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	187209719	187209753	-61746669	+	(TG)n	Simple_repeat	Simple_repeat	1	34	0	2
chr1	187322126	187322127	chunk0015_192_1	152.7107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	187322042	187322205	-61634217	+	L2b	LINE	L2	3215	3375	0	2
chr1	187352303	187352304	chunk0015_197_1	36.4033	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187351836	187352385	-61604037	+	L1MEd	LINE	L1	4860	5371	-775	2
chr1	187396417	187396418	chunk0015_202_1	21.1579	AR_DHT_Control	chr1	187396198	187396493	-61559929	-	MLT1D	LTR	ERVL-MaLR	0	505	182	2
chr1	187523463	187523464	chunk0015_212_1	8.14487	AR_DHT_Control	chr1	187523361	187523481	-61432941	+	L2a	LINE	L2	3303	3422	-4	2
chr1	187555064	187555065	chunk0015_213_1	28.665	AR_DHT_Control	chr1	187554371	187555136	-61401286	-	L2a	LINE	L2	-3	3423	2662	2
chr1	187567001	187567002	chunk0015_214_1	52.8545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187566973	187567460	-61388962	+	LOR1a	LTR	ERV1	1	485	-12	2
chr1	187587128	187587129	chunk0015_219_1	12.3853	AR_DHT_Control	chr1	187586986	187587225	-61369197	+	MIR	SINE	MIR	2	241	-21	2
chr1	187750903	187750904	chunk0015_225_1	50.456	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187750353	187751298	-61205124	-	LTR53-int	LTR	ERVL	-2076	1253	315	2
chr1	187752739	187752740	chunk0015_226_1	34.84645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187752721	187752906	-61203516	-	MIR	SINE	MIR	-61	201	2	2
chr1	187838015	187838016	chunk0015_240_1	260.09054	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187837819	187838081	-61118341	-	MamGyp-int	LTR	Gypsy	-892	4211	3965	2
chr1	187968307	187968308	chunk0015_246_1	65.74096	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	187968182	187968458	-60987964	-	L1PA8	LINE	L1	-2	6170	5885	2
chr1	187972070	187972071	chunk0015_248_1	191.151	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	187972012	187972215	-60984207	-	MER20	DNA	hAT-Charlie	0	219	6	2
chr1	188006433	188006434	chunk0015_251_1	73.3777	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	188006425	188006710	-60949712	-	LTR50	LTR	ERVL	-497	298	1	2
chr1	188062011	188062012	chunk0015_255_1	33.5294	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	188060870	188062497	-60893925	-	L1PA15	LINE	L1	-2	6783	5111	2
chr1	188073539	188073540	chunk0015_256_1	8.49128	AR_DHT_Control	chr1	188073353	188075799	-60880623	-	L1PA15	LINE	L1	-21	6144	3751	2
chr1	188128964	188128965	chunk0015_257_1	6.71486	AR_DHT_Control	chr1	188127435	188130577	-60825845	+	L1PA16	LINE	L1	1	3068	-3781	2
chr1	188222703	188222704	chunk0015_264_1	39.9787	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	188222466	188222730	-60733692	-	MER63C	DNA	hAT-Blackjack	-252	678	413	2
chr1	188226265	188226266	chunk0015_267_1	32.6291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	188224629	188228810	-60727612	-	L1MA3	LINE	L1	-1962	5603	1340	2
chr1	188397300	188397301	chunk0015_269_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188396563	188397740	-60558682	+	L1MA5	LINE	L1	400	1543	-6023	2
chr1	188432781	188432782	chunk0015_271_1	18.23924	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	188432767	188432862	-60523560	-	MIRb	SINE	MIR	-75	193	75	2
chr1	188458847	188458848	chunk0015_273_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188458772	188458973	-60497449	-	MER45R	DNA	hAT-Tip100	-1381	200	2	2
chr1	188542415	188542416	chunk0015_275_1	31.3175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	188541996	188542663	-60413759	+	L1MEc	LINE	L1	1488	2366	-4034	2
chr1	188548348	188548349	chunk0015_276_1	110.46758	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	188547307	188548669	-60407753	-	L1MA3	LINE	L1	-1	7723	6364	2
chr1	188639252	188639253	chunk0015_284_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188639063	188639524	-60316898	-	L1MDa	LINE	L1	-5929	611	135	2
chr1	188763764	188763765	chunk0015_291_1	5.66005	AR_DHT_Control	chr1	188763154	188764275	-60192147	-	L1MC3	LINE	L1	-1	7784	6626	2
chr1	188770207	188770208	chunk0015_292_1	20.65621	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	188770099	188774996	-60181426	+	L1PA10	LINE	L1	1746	6646	-49	2
chr1	188822076	188822077	chunk0015_296_1	11.8854	AR_DHT_Control	chr1	188822074	188822111	-60134311	+	(GA)n	Simple_repeat	Simple_repeat	1	37	0	2
chr1	188856010	188856011	chunk0015_297_1	9.13774	AR_DHT_Control	chr1	188855679	188856395	-60100027	-	L1ME2	LINE	L1	-70	6094	5273	2
chr1	188874519	188874520	chunk0015_300_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188874224	188874955	-60081467	-	LTR1B0	LTR	ERV1	0	742	1	2
chr1	188944734	188944735	chunk0015_303_1	6.54035	AR_DHT_Control	chr1	188944469	188944909	-60011513	-	MER90	LTR	ERV1	-99	476	1	2
chr1	188953719	188953720	chunk0015_304_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188952906	188955192	-60001230	+	L1PA16	LINE	L1	5	2292	-4211	2
chr1	188964961	188964962	chunk0015_305_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	188964711	188965001	-59991421	-	MLT1A	LTR	ERVL-MaLR	0	374	88	2
chr1	189020493	189020494	chunk0015_306_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	189019481	189021382	-59935040	+	L1MC3	LINE	L1	5859	7774	-11	2
chr1	189130120	189130121	chunk0015_308_1	25.7984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189129933	189130716	-59825706	+	L1MB8	LINE	L1	5385	6176	-2	2
chr1	189132849	189132850	chunk0015_310_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	189132840	189132934	-59823488	-	MamRTE1	LINE	RTE-BovB	-720	3092	3004	2
chr1	189172108	189172109	chunk0015_313_1	4.96796	AR_DHT_Control	chr1	189167993	189173584	-59782838	+	HERVL-int	LTR	ERVL	1	5654	0	2
chr1	189246011	189246012	chunk0015_315_1	75.8128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189245905	189246453	-59709969	+	L2a	LINE	L2	2807	3426	0	2
chr1	189336501	189336502	chunk0015_317_1	9.44294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	189336054	189337716	-59618706	+	L1PA15	LINE	L1	332	2096	-4689	2
chr1	189372041	189372042	chunk0015_320_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	189371988	189372868	-59583554	-	L1ME1	LINE	L1	-10	6169	5197	2
chr1	189516138	189516139	chunk0015_324_1	7.69414	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	189512660	189519057	-59437365	+	L1PA10	LINE	L1	2	6479	-4	2
chr1	189605035	189605036	chunk0015_326_1	8.41723	AR_DHT_Control	chr1	189604976	189605158	-59351264	-	MIR	SINE	MIR	-4	258	68	2
chr1	189616073	189616074	chunk0015_328_1	41.0942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189615554	189616838	-59339584	+	L1MEd	LINE	L1	3307	4701	-1445	2
chr1	189708737	189708738	chunk0015_330_1	7.52656	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	189708211	189710067	-59246355	+	L1PA15	LINE	L1	496	2333	-4452	2
chr1	189715125	189715126	chunk0015_331_1	7.37742	AR_DHT_Control	chr1	189714831	189715208	-59241214	-	MER92A	LTR	ERV1	-53	359	1	2
chr1	189762306	189762307	chunk0015_332_1	12.1886	AR_DHT_Control	chr1	189762200	189762958	-59193464	-	LTR1A2	LTR	ERV1	-67	770	1	2
chr1	189805270	189805271	chunk0015_335_1	30.3426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189804857	189806019	-59150403	+	MLT1E2-int	LTR	ERVL-MaLR	1	1104	-385	2
chr1	189842023	189842024	chunk0015_338_1	51.4447	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	189841545	189843068	-59113354	-	L1MA8	LINE	L1	-75	7635	6090	2
chr1	189853818	189853819	chunk0015_342_1	6.73207	AR_DHT_Control	chr1	189853354	189854299	-59102123	-	L1PB4	LINE	L1	-9	6850	5900	2
chr1	189921411	189921412	chunk0015_343_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	189919131	189921976	-59034446	-	L1PB4	LINE	L1	-3845	3070	348	2
chr1	189950959	189950960	chunk0015_344_1	18.02666	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	189950892	189951072	-59005350	-	MIRb	SINE	MIR	-53	215	38	2
chr1	190022328	190022329	chunk0015_346_1	41.9763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	190022062	190023080	-58933342	+	L1MC1	LINE	L1	5295	6331	-2	2
chr1	190159401	190159402	chunk0015_349_1	6.28518	AR_DHT_Control	chr1	190158898	190159813	-58796609	+	L1MB7	LINE	L1	5175	6120	-64	2
chr1	190190266	190190267	chunk0015_352_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	190189993	190190545	-58765877	-	L1M3e	LINE	L1	-6491	998	466	2
chr1	190327833	190327834	chunk0015_357_1	6.73207	AR_DHT_Control	chr1	190327344	190331097	-58625325	+	L1PA16	LINE	L1	2915	6852	-17	2
chr1	190355356	190355357	chunk0015_358_1	19.5679	AR_DHT_Control	chr1	190355043	190355588	-58600834	+	MER99	DNA	hAT?	68	623	-208	2
chr1	190367115	190367116	chunk0015_359_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	190366501	190368074	-58588348	-	THE1C-int	LTR	ERVL-MaLR	0	1631	5	2
chr1	190379331	190379332	chunk0015_362_1	8.58634	AR_DHT_Control	chr1	190379236	190379678	-58576744	-	L2a	LINE	L2	0	3426	2947	2
chr1	190488236	190488237	chunk0015_375_1	27.69621	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	190488215	190488279	-58468143	+	L2a	LINE	L2	3362	3426	0	2
chr1	190518845	190518846	chunk0015_377_1	40.9838	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	190518587	190519640	-58436782	+	Tigger3b	DNA	TcMar-Tigger	1	1059	-172	2
chr1	190570798	190570799	chunk0015_381_1	5.0408	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	190570495	190571116	-58385306	-	L1MA9	LINE	L1	-1399	4741	4118	2
chr1	190683022	190683023	chunk0015_388_1	29.94486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	190682884	190683106	-58273316	-	L1MCb	LINE	L1	-936	5628	5408	2
chr1	190764413	190764414	chunk0015_392_1	36.89997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	190764391	190764592	-58191830	-	MIRb	SINE	MIR	-19	249	45	2
chr1	190784398	190784399	chunk0015_394_1	18.12183	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	190782004	190785052	-58171370	+	L1PA16	LINE	L1	733	3782	-3067	2
chr1	190886967	190886968	chunk0015_396_1	43.00853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	190886486	190887234	-58069188	+	MLT1J2-int	LTR	ERVL-MaLR	357	1231	-156	2
chr1	191020743	191020744	chunk0015_401_1	13.9477	AR_DHT_Control	chr1	191020561	191020830	-57935592	+	L1MA10	LINE	L1	6055	6332	-2	2
chr1	191093642	191093643	chunk0015_404_1	6.93299	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	191093136	191094159	-57862263	+	L1PB4	LINE	L1	4767	5855	-301	2
chr1	191112037	191112038	chunk0015_405_1	9.94664	AR_DHT_Control	chr1	191111824	191112070	-57844352	-	L1M7	LINE	L1	-4693	1525	1264	2
chr1	191135528	191135529	chunk0015_407_1	43.9165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	191134738	191136884	-57819538	+	L1MCa	LINE	L1	1	2191	-4317	2
chr1	191153043	191153044	chunk0015_408_1	8.08101	AR_DHT_Control	chr1	191152464	191155164	-57801258	+	MER4B-int	LTR	ERV1	198	4299	-2377	2
chr1	191175138	191175139	chunk0015_411_1	8.76676	AR_DHT_Control	chr1	191174033	191176756	-57779666	-	Tigger2	DNA	TcMar-Tigger	0	2718	2	2
chr1	191279660	191279661	chunk0015_412_1	35.8628	AR_DHT_Control	chr1	191279518	191279874	-57676548	-	MLT1A1	LTR	ERVL-MaLR	0	408	1	2
chr1	191302736	191302737	chunk0015_413_1	6.62034	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	191300721	191303747	-57652675	-	L1PA16	LINE	L1	-3399	3084	5	2
chr1	191365170	191365171	chunk0015_415_1	6.05516	AR_DHT_Control	chr1	191364982	191365466	-57590956	+	MER70C	LTR	ERVL	2	500	-31	2
chr1	191424158	191424159	chunk0015_416_1	6.94497	AR_DHT_Control	chr1	191423873	191425313	-57531109	+	L1MEg	LINE	L1	3315	4783	-1363	2
chr1	191481130	191481131	chunk0015_418_1	13.9477	AR_DHT_Control	chr1	191480692	191481211	-57475211	+	LTR38	LTR	ERV1	30	556	0	2
chr1	191515579	191515580	chunk0015_419_1	7.12934	AR_DHT_Control	chr1	191515576	191515599	-57440823	+	(GT)n	Simple_repeat	Simple_repeat	1	23	0	2
chr1	191520615	191520616	chunk0015_420_1	12.40208	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	191520492	191520941	-57435481	-	LTR40A1	LTR	ERVL	-82	502	7	2
chr1	191533381	191533382	chunk0015_422_1	8.52187	AR_DHT_Control	chr1	191533027	191534866	-57421556	+	L1M2	LINE	L1	1	2936	-4171	2
chr1	191607961	191607962	chunk0015_430_1	10.5201	AR_DHT_Control	chr1	191607906	191608207	-57348215	-	MER50B	LTR	ERV1	0	697	407	2
chr1	191609030	191609031	chunk0015_431_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	191608966	191609131	-57347291	+	HERVL18-int	LTR	ERVL	2	165	-5882	2
chr1	191636711	191636712	chunk0015_432_1	25.3343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	191636605	191636830	-57319592	-	L1MA7	LINE	L1	-217	6074	5854	2
chr1	191928443	191928444	chunk0015_441_1	15.6041	AR_DHT_Control	chr1	191927966	191928455	-57027967	+	L1MA1	LINE	L1	22	505	-7060	2
chr1	191938909	191938910	chunk0015_442_1	105.2094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	191938012	191939480	-57016942	-	L1PA16	LINE	L1	-5	6161	4657	2
chr1	191983697	191983698	chunk0015_447_1	9.63462	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	191981906	191984025	-56972397	-	L1MA4A	LINE	L1	-4594	2972	749	2
chr1	192419021	192419022	chunk0015_452_1	21.50176	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	192419015	192419236	-56537186	+	MER58A	DNA	hAT-Charlie	1	222	-2	2
chr1	192424538	192424539	chunk0015_453_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	192423877	192425917	-56530505	+	L1MA4A	LINE	L1	718	2627	-4939	2
chr1	192496579	192496580	chunk0015_454_1	137.8205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	192496063	192496727	-56459695	+	L1M5	LINE	L1	4360	5077	-1069	2
chr1	192666358	192666359	chunk0016_1_1	5.99997	AR_DHT_Control	chr1	192662965	192669094	-56287328	-	L1PA6	LINE	L1	-3	6151	5	2
chr1	192668375	192668376	chunk0016_2_1	5.46037	AR_DHT_Control	chr1	192662965	192669094	-56287328	-	L1PA6	LINE	L1	-3	6151	5	2
chr1	192680182	192680183	chunk0016_3_1	14.16211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	192680157	192680189	-56276233	+	(CCTC)n	Simple_repeat	Simple_repeat	1	32	0	2
chr1	192707453	192707454	chunk0016_8_1	4.81216	AR_DHT_Control	chr1	192707398	192707501	-56248921	+	MLT1B	LTR	ERVL-MaLR	1	87	-303	2
chr1	192715311	192715312	chunk0016_9_1	8.68286	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	192713580	192716143	-56240279	+	L1M1	LINE	L1	12	2571	-4994	2
chr1	193008097	193008098	chunk0016_27_1	47.9958	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193008055	193008130	-55948292	-	MIRc	SINE	MIR	-172	96	20	2
chr1	193036569	193036570	chunk0016_30_1	16.21598	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193035262	193038174	-55918248	+	L1MA4	LINE	L1	2659	5474	-2091	2
chr1	193122122	193122123	chunk0016_40_1	10.0039	AR_DHT_Control	chr1	193122095	193122150	-55834272	+	GA-rich	Low_complexity	Low_complexity	1	55	0	2
chr1	193145349	193145350	chunk0016_41_1	23.33932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193144444	193145718	-55810704	+	Charlie1	DNA	hAT-Charlie	1442	2760	-21	2
chr1	193156886	193156887	chunk0016_43_1	9.63462	AR_DHT_Control	chr1	193156822	193157213	-55799209	-	L2b	LINE	L2	-2	3373	2985	2
chr1	193165944	193165945	chunk0016_45_1	21.93181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	193165928	193166039	-55790383	-	Cheshire	DNA	hAT-Charlie	-776	1644	1531	2
chr1	193218967	193218968	chunk0016_48_1	62.1572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	193217890	193219889	-55736533	+	L1PA15	LINE	L1	4123	6150	-15	2
chr1	193242047	193242048	chunk0016_49_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	193240929	193242641	-55713781	-	L1MA4A	LINE	L1	-5021	1828	3	2
chr1	193261501	193261502	chunk0016_50_1	9.31879	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193261479	193261666	-55694756	-	Charlie7	DNA	hAT-Charlie	-2044	568	375	2
chr1	193269831	193269832	chunk0016_52_1	101.7924	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193269285	193270198	-55686224	-	L4_C_Mam	LINE	RTE-X	-783	4355	3376	2
chr1	193292845	193292846	chunk0016_55_1	20.18037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193292793	193293056	-55663366	-	L2c	LINE	L2	-24	3351	3049	2
chr1	193306646	193306647	chunk0016_57_1	61.96164	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193306558	193306695	-55649727	+	L3	LINE	CR1	2104	2236	-1863	2
chr1	193333857	193333858	chunk0016_59_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	193331520	193333879	-55622543	-	L1MA8	LINE	L1	-3275	4287	1887	2
chr1	193532833	193532834	chunk0016_66_1	12.0071	AR_DHT_Control	chr1	193532218	193533173	-55423249	+	L1PA15	LINE	L1	5192	6159	-6	2
chr1	193542186	193542187	chunk0016_67_1	4.29711	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	193541896	193542295	-55414127	-	MLT1J1	LTR	ERVL-MaLR	-16	428	1	2
chr1	193597970	193597971	chunk0016_68_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193597959	193598197	-55358225	-	Charlie2b	DNA	hAT-Charlie	-1	2781	2568	2
chr1	193658732	193658733	chunk0016_69_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193658700	193658955	-55297467	+	MLT1I	LTR	ERVL-MaLR	59	323	-226	2
chr1	193768180	193768181	chunk0016_75_1	13.29934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193767927	193768211	-55188211	-	AluSz	SINE	Alu	-27	285	1	2
chr1	193855135	193855136	chunk0016_77_1	11.9014	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	193855012	193855365	-55101057	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	2
chr1	193863501	193863502	chunk0016_78_1	5.32898	AR_DHT_Control	chr1	193863324	193863692	-55092730	+	THE1B	LTR	ERVL-MaLR	1	364	0	2
chr1	193927605	193927606	chunk0016_79_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	193926945	193928140	-55028282	-	LTR2752	LTR	ERV1	0	1263	1	2
chr1	194081531	194081532	chunk0016_80_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	194081500	194081738	-54874684	-	MIRb	SINE	MIR	-2	266	20	2
chr1	194231062	194231063	chunk0016_82_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	194229952	194231072	-54725350	-	MER52C	LTR	ERV1	0	1278	1	2
chr1	194256470	194256471	chunk0016_85_1	16.42641	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	194256415	194256948	-54699474	+	MLT2B1	LTR	ERVL	1	520	0	2
chr1	194437116	194437117	chunk0016_87_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	194436770	194438003	-54518419	+	L1PA13	LINE	L1	2	1487	-5299	2
chr1	194889575	194889576	chunk0016_92_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	194889196	194889639	-54066783	+	MER52D	LTR	ERV1	633	1077	-1046	2
chr1	195005485	195005486	chunk0016_93_1	4.70357	AR_DHT_Control	chr1	195004511	195005640	-53950782	-	ERVL-E-int	LTR	ERVL	-644	5023	3838	2
chr1	195181231	195181232	chunk0016_95_1	42.503	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195180399	195182155	-53774267	-	L1PA16	LINE	L1	-12	6154	4382	2
chr1	195218644	195218645	chunk0016_97_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195218186	195219154	-53737268	+	LTR2752	LTR	ERV1	233	1263	0	2
chr1	195237662	195237663	chunk0016_98_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195237234	195238745	-53717677	+	MER52A	LTR	ERV1	1	1755	0	2
chr1	195364102	195364103	chunk0016_102_1	5.73469	AR_DHT_Control	chr1	195361418	195364213	-53592209	+	L1MA1	LINE	L1	4466	7204	-517	2
chr1	195894505	195894506	chunk0016_107_1	13.54415	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	195894266	195894742	-53061680	-	MER70A	LTR	ERVL	0	472	1	2
chr1	195979852	195979853	chunk0016_108_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	195979831	195980325	-52976097	-	LTR55	LTR	ERVL?	-17	531	1	2
chr1	196018255	196018256	chunk0016_113_1	27.19001	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	196018135	196018545	-52937877	-	MLT1A1	LTR	ERVL-MaLR	0	408	1	2
chr1	196026651	196026652	chunk0016_114_1	8.35541	AR_DHT_Control	chr1	196026571	196026757	-52929665	+	LTR78	LTR	ERV1	666	858	-446	2
chr1	196109633	196109634	chunk0016_117_1	6.48643	AR_DHT_Control	chr1	196108731	196109705	-52846717	-	LTR5_Hs	LTR	ERVK	0	968	1	2
chr1	196118197	196118198	chunk0016_118_1	7.57442	AR_DHT_Control	chr1	196117665	196118265	-52838157	+	L1PA17	LINE	L1	4483	5113	-1033	2
chr1	196896489	196896490	chunk0016_122_1	7.17788	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	196896119	196896837	-52059585	-	L1M4c	LINE	L1	-5579	805	19	2
chr1	196979431	196979432	chunk0016_128_1	14.17421	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	196979288	196980574	-51975848	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	2
chr1	196991836	196991837	chunk0016_131_1	54.3573	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	196986363	196992657	-51963765	-	L1PA6	LINE	L1	-1	6338	13	2
chr1	197027776	197027777	chunk0016_133_1	4.19326	AR_DHT_Control	chr1	197027723	197028287	-51928135	-	L1MA9	LINE	L1	0	6312	5766	2
chr1	197043199	197043200	chunk0016_134_1	102.745	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	197042985	197043457	-51912965	+	L1MEg	LINE	L1	271	770	-5472	2
chr1	197170639	197170640	chunk0016_137_1	28.13882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	197170560	197170675	-51785747	+	MamRep605	LTR?	LTR?	667	778	-71	2
chr1	197196896	197196897	chunk0016_138_1	8.51012	AR_DHT_Control	chr1	197196380	197197071	-51759351	+	L2c	LINE	L2	2594	3370	-17	2
chr1	197212101	197212102	chunk0016_139_1	16.36286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	197211762	197212776	-51743646	+	L1ME1	LINE	L1	5117	6178	-1	2
chr1	197552322	197552323	chunk0016_154_1	10.3813	AR_DHT_Control	chr1	197552247	197552343	-51404079	+	L2a	LINE	L2	3311	3425	-1	2
chr1	197557674	197557675	chunk0016_155_1	6.25666	AR_DHT_Control	chr1	197557641	197557688	-51398734	+	(ATACAT)n	Simple_repeat	Simple_repeat	1	48	0	2
chr1	197633537	197633538	chunk0016_156_1	5.00158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	197633317	197634343	-51322079	+	LTR41	LTR	ERVL	1	768	0	2
chr1	197663316	197663317	chunk0016_160_1	41.8519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	197662829	197663358	-51293064	-	L3	LINE	CR1	-709	3390	2793	2
chr1	197866015	197866016	chunk0016_168_1	29.2238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	197865998	197866271	-51090151	+	L1MC5	LINE	L1	8942	9266	-38	2
chr1	198056515	198056516	chunk0016_173_1	8.91027	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	198055482	198057322	-50899100	-	L1M2	LINE	L1	-4998	1851	1	2
chr1	198079855	198079856	chunk0016_175_1	33.82621	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	198079255	198079956	-50876466	-	MER61E	LTR	ERV1	0	779	14	2
chr1	198091654	198091655	chunk0016_180_1	6.37684	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	198091643	198091760	-50864662	-	LTR16B	LTR	ERVL	-5	458	343	2
chr1	198144345	198144346	chunk0016_181_1	14.90925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	198144306	198144375	-50812047	+	L2c	LINE	L2	3315	3378	-9	2
chr1	198208203	198208204	chunk0016_184_1	17.5977	AR_DHT_Control	chr1	198208153	198208358	-50748064	-	L1MEg	LINE	L1	-5442	783	580	2
chr1	198212844	198212845	chunk0016_185_1	6.86821	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	198211724	198213294	-50743128	+	L1PBa	LINE	L1	3	1637	-5226	2
chr1	198213475	198213476	chunk0016_186_1	5.50096	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	198213261	198215368	-50741054	+	L1PB3	LINE	L1	713	2942	-3974	2
chr1	198510557	198510558	chunk0016_193_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	198508795	198511990	-50444432	-	L1M1	LINE	L1	-4210	3355	14	2
chr1	198973990	198973991	chunk0016_212_1	13.1346	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	198973106	198974157	-49982265	+	Tigger6a	DNA	TcMar-Tigger	1	1083	0	2
chr1	199045773	199045774	chunk0016_217_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	199045694	199051921	-49904501	+	L1PA16	LINE	L1	3	6473	-18	2
chr1	199046605	199046606	chunk0016_218_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	199045694	199051921	-49904501	+	L1PA16	LINE	L1	3	6473	-18	2
chr1	199439848	199439849	chunk0016_222_1	13.43277	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	199438731	199441226	-49515196	+	L1MA3	LINE	L1	3749	6296	-9	2
chr1	199462643	199462644	chunk0016_224_1	4.86605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	199462374	199462805	-49493617	+	L1M1	LINE	L1	1532	1954	-5532	2
chr1	199488680	199488681	chunk0016_225_1	15.3685	AR_DHT_Control	chr1	199488490	199488698	-49467724	-	L3	LINE	CR1	-835	3264	3044	2
chr1	199679709	199679710	chunk0016_229_1	11.5514	AR_DHT_Control	chr1	199679538	199679723	-49276699	-	MIRc	SINE	MIR	-57	211	23	2
chr1	199730367	199730368	chunk0016_232_1	6.28518	AR_DHT_Control	chr1	199730357	199730477	-49225945	+	L1ME3B	LINE	L1	5993	6118	-124	2
chr1	199774993	199774994	chunk0016_233_1	69.22356	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	199774910	199775010	-49181412	-	L2c	LINE	L2	-10	3416	3312	2
chr1	199794782	199794783	chunk0016_236_1	50.1477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	199794233	199794788	-49161634	-	Charlie1a	DNA	hAT-Charlie	-589	866	302	2
chr1	199901489	199901490	chunk0016_240_1	65.2356	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	199901303	199901803	-49054619	-	MER87B	LTR	ERV1	0	509	1	2
chr1	199947942	199947943	chunk0016_244_1	4.96282	AR_DHT_Control	chr1	199947818	199948119	-49008303	-	L1PA12	LINE	L1	-11	6157	5861	2
chr1	200051943	200051944	chunk0016_247_1	70.9581	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	200051834	200052136	-48904286	-	MER112	DNA	hAT-Charlie	-2	259	5	2
chr1	200260784	200260785	chunk0016_262_1	5.73594	AR_DHT_Control	chr1	200260640	200260902	-48695520	-	MLT1H2	LTR	ERVL-MaLR	-246	303	5	2
chr1	200296545	200296546	chunk0016_263_1	6.67113	AR_DHT_Control	chr1	200296542	200296675	-48659747	+	FLAM_C	SINE	Alu	3	133	0	2
chr1	200326610	200326611	chunk0016_264_1	11.5199	AR_DHT_Control	chr1	200326016	200326618	-48629804	-	L1ME3	LINE	L1	-55	6107	5438	2
chr1	200707695	200707696	chunk0016_278_1	28.80963	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	200707390	200708090	-48248332	-	L2a	LINE	L2	0	3426	2699	2
chr1	200732645	200732646	chunk0016_282_1	37.91514	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	200732283	200732761	-48223661	-	L2	LINE	L2	-812	2607	2098	2
chr1	200755719	200755720	chunk0016_284_1	100.1774	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	200755694	200756089	-48200333	-	L2b	LINE	L2	-15	3360	2924	2
chr1	201082413	201082414	chunk0016_292_1	29.49777	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	201082396	201082776	-47873646	+	L2c	LINE	L2	2969	3384	-3	2
chr1	201245204	201245205	chunk0016_297_1	5.73469	AR_DHT_Control	chr1	201245005	201245396	-47711026	+	MLT1A	LTR	ERVL-MaLR	1	370	-4	2
chr1	201266645	201266646	chunk0016_299_1	66.6655	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	201266451	201266925	-47689497	-	HAL1b	LINE	L1	-1253	1168	640	2
chr1	201340499	201340500	chunk0016_306_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	201339657	201342585	-47613837	-	L1MEf	LINE	L1	-2815	3331	87	2
chr1	201461218	201461219	chunk0016_310_1	17.35869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	201461174	201461416	-47495006	-	L2c	LINE	L2	-20	3367	3118	2
chr1	201512197	201512198	chunk0016_315_1	13.69197	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	201512171	201512228	-47444194	+	G-rich	Low_complexity	Low_complexity	1	60	0	2
chr1	201775561	201775562	chunk0016_333_1	254.8238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	201774794	201775777	-47180645	+	HAL1	LINE	L1	68	1062	-1445	2
chr1	201799259	201799260	chunk0016_336_1	6.49378	AR_DHT_Control	chr1	201799102	201799264	-47157158	+	L1MC4	LINE	L1	7824	7983	-59	2
chr1	201843932	201843933	chunk0016_337_1	10.1214	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	201843845	201843951	-47112471	-	MER21C	LTR	ERVL	-835	103	6	2
chr1	202018881	202018882	chunk0016_346_1	25.5984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	202018806	202018955	-46937467	+	L2b	LINE	L2	3201	3368	-7	2
chr1	202037099	202037100	chunk0016_348_1	19.9068	AR_DHT_Control	chr1	202036994	202037102	-46919320	-	L2a	LINE	L2	0	3426	3317	2
chr1	202064739	202064740	chunk0016_353_1	12.1937	AR_DHT_Control	chr1	202064497	202064795	-46891627	+	L1MB7	LINE	L1	5371	5674	-510	2
chr1	202287478	202287479	chunk0016_356_1	12.6828	AR_DHT_Control	chr1	202287364	202288466	-46667956	+	L2a	LINE	L2	2195	3422	-4	2
chr1	202374274	202374275	chunk0016_362_1	47.6898	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	202374112	202374308	-46582114	+	L2c	LINE	L2	2365	2589	-830	2
chr1	202509082	202509083	chunk0016_369_1	22.51955	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	202508875	202509099	-46447323	-	MER58A	DNA	hAT-Charlie	-4	220	1	2
chr1	202592997	202592998	chunk0016_376_1	41.6975	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	202592809	202592999	-46363423	-	MER53	DNA	hAT	0	193	1	2
chr1	202625014	202625015	chunk0016_378_1	34.23327	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	202624115	202625415	-46331007	+	(GT)n	Simple_repeat	Simple_repeat	1	1378	0	2
chr1	202974953	202974954	chunk0016_391_1	4.03211	AR_DHT_Control	chr1	202974937	202975004	-45981418	-	LTR75B	LTR	ERVL	-45	563	497	2
chr1	203027729	203027730	chunk0016_392_1	5.64193	AR_DHT_Control	chr1	203027672	203027731	-45928691	-	L2b	LINE	L2	-7	3368	3310	2
chr1	203069626	203069627	chunk0016_393_1	3.47712	AR_DHT_Control	chr1	203069319	203070132	-45886290	-	CR1_Mam	LINE	CR1	-29	2175	1364	2
chr1	203239578	203239579	chunk0016_402_1	65.38199	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	203239568	203239661	-45716761	-	L2b	LINE	L2	-19	3356	3256	2
chr1	203257207	203257208	chunk0016_403_1	8.27376	AR_DHT_Control	chr1	203256484	203257899	-45698523	+	L1P2	LINE	L1	2	1420	-4764	2
chr1	203397413	203397414	chunk0016_416_1	72.5012	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	203397324	203398515	-45557907	-	L1MA9	LINE	L1	-33	6279	5074	2
chr1	203429296	203429297	chunk0016_419_1	25.93062	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	203429152	203429582	-45526840	-	LTR22A	LTR	ERVK	0	458	3	2
chr1	203434756	203434757	chunk0016_420_1	27.99384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	203434095	203434793	-45521629	+	L2b	LINE	L2	2626	3374	-1	2
chr1	203812354	203812355	chunk0016_431_1	13.0599	AR_DHT_Control	chr1	203812116	203812488	-45143934	-	L1PA12	LINE	L1	-5	6163	5793	3
chr1	203839267	203839268	chunk0016_432_1	16.61756	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	203839211	203839337	-45117085	-	FLAM_A	SINE	Alu	-10	132	4	3
chr1	203932187	203932188	chunk0016_435_1	13.4818	AR_DHT_Control	chr1	203932180	203932485	-45023937	-	MLT1N2	LTR	ERVL-MaLR	-266	296	1	3
chr1	204061081	204061082	chunk0016_438_1	12.19837	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	204061008	204061139	-44895283	+	L2a	LINE	L2	3295	3426	0	3
chr1	204319706	204319707	chunk0017_4_1	7.23138	AR_DHT_Control	chr1	204319644	204319786	-44636636	+	L2c	LINE	L2	3241	3382	-5	3
chr1	204388378	204388379	chunk0017_8_1	20.0007	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	204387662	204388412	-44568010	+	L2a	LINE	L2	2567	3426	0	3
chr1	204398606	204398607	chunk0017_10_1	6.3364	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	204398585	204398621	-44557801	+	G-rich	Low_complexity	Low_complexity	1	36	0	3
chr1	204506962	204506963	chunk0017_24_1	6.3364	AR_DHT_Control	chr1	204506877	204507021	-44449401	+	L1MA8	LINE	L1	6142	6291	0	3
chr1	204741595	204741596	chunk0017_27_1	19.28741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	204741418	204742068	-44214354	-	HAL1	LINE	L1	-942	1565	911	3
chr1	204882607	204882608	chunk0017_31_1	153.5313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	204882258	204882720	-44073702	+	L2a	LINE	L2	2877	3425	-1	3
chr1	204897125	204897126	chunk0017_35_1	5.09613	AR_DHT_Control	chr1	204896984	204897154	-44059268	+	MER5A1	DNA	hAT-Charlie	9	166	0	3
chr1	205188317	205188318	chunk0017_42_1	8.00425	AR_DHT_Control	chr1	205188277	205188555	-43767867	-	Tigger3c	DNA	TcMar-Tigger	0	602	329	3
chr1	205268661	205268662	chunk0017_45_1	32.7674	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	205268643	205268796	-43687626	+	MIRc	SINE	MIR	40	227	-41	3
chr1	205478181	205478182	chunk0017_59_1	10.9812	AR_DHT_Control	chr1	205478058	205478191	-43478231	-	L2a	LINE	L2	-6	3420	3256	3
chr1	205525864	205525865	chunk0017_65_1	6.39317	AR_DHT_Control	chr1	205525725	205526008	-43430414	-	L2c	LINE	L2	-56	3331	3018	3
chr1	205552723	205552724	chunk0017_67_1	16.37581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	205552606	205552877	-43403545	+	HAL1	LINE	L1	1972	2169	-338	3
chr1	205610811	205610812	chunk0017_70_1	15.50103	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	205610768	205610832	-43345590	+	(AC)n	Simple_repeat	Simple_repeat	1	64	0	3
chr1	205677400	205677401	chunk0017_76_1	16.92771	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	205677400	205677563	-43278859	-	MIRb	SINE	MIR	0	268	97	3
chr1	205699155	205699156	chunk0017_77_1	347.0521	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	205699118	205699296	-43257126	+	L1MD2	LINE	L1	5660	5830	-529	3
chr1	205758995	205758996	chunk0017_90_1	81.1086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	205758911	205759184	-43197238	+	L1ME3G	LINE	L1	507	667	-257	3
chr1	205824043	205824044	chunk0017_95_1	158.5815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	205824032	205824103	-43132319	-	L1MA8	LINE	L1	-2	6289	6216	3
chr1	205825185	205825186	chunk0017_98_1	40.2889	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	205825020	205825326	-43131096	+	Zaphod	DNA	hAT-Tip100	431	727	-3304	3
chr1	205864225	205864226	chunk0017_102_1	16.1284	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	205862750	205864227	-43092195	+	HERVK14C-int	LTR	ERVK	5192	7422	-12	3
chr1	205959242	205959243	chunk0017_109_1	114.32261	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	205959175	205959437	-42996985	+	L2a	LINE	L2	3009	3289	-98	3
chr1	206050419	206050420	chunk0017_115_1	57.1247	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	206050076	206050552	-42905870	+	L1ME4b	LINE	L1	395	884	-8	3
chr1	206122285	206122286	chunk0017_120_1	11.0326	AR_DHT_Control	chr1	206122095	206122609	-42833813	-	MLT2B4	LTR	ERVL	-44	512	2	3
chr1	206526281	206526282	chunk0017_129_1	6.77976	AR_DHT_Control	chr1	206526269	206526293	-42430129	+	(GT)n	Simple_repeat	Simple_repeat	1	24	0	3
chr1	206550631	206550632	chunk0017_132_1	60.14729	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	206550619	206550698	-42405724	+	L2b	LINE	L2	3259	3344	-31	3
chr1	206617249	206617250	chunk0017_139_1	94.299	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	206617123	206617384	-42339038	+	L1MD	LINE	L1	4936	5200	-946	3
chr1	206712545	206712546	chunk0017_146_1	21.47973	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	206712506	206712681	-42243741	-	L3	LINE	CR1	-781	3318	3148	3
chr1	206748848	206748849	chunk0017_150_1	67.5526	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	206748817	206748899	-42207523	+	MER91C	DNA	hAT-Tip100	36	121	-19	3
chr1	206916268	206916269	chunk0017_155_1	4.88212	AR_DHT_Control	chr1	206916181	206916730	-42039692	+	L3	LINE	CR1	1380	1998	-2101	3
chr1	206924282	206924283	chunk0017_156_1	30.49541	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr1	206923600	206924793	-42031629	+	(GT)n	Simple_repeat	Simple_repeat	1	1229	0	3
chr1	206999163	206999164	chunk0017_159_1	71.3343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	206998980	206999316	-41957106	-	Tigger3a	DNA	TcMar-Tigger	0	348	3	3
chr1	207025731	207025732	chunk0017_166_1	37.4865	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207025666	207025865	-41930557	-	Tigger19a	DNA	TcMar-Tigger	-74	249	58	3
chr1	207028139	207028140	chunk0017_169_1	52.2467	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207027981	207028147	-41928275	+	MIRb	SINE	MIR	6	224	-44	3
chr1	207038273	207038274	chunk0017_175_1	34.1631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	207038199	207038351	-41918071	-	L2a	LINE	L2	-1	3425	3274	3
chr1	207307341	207307342	chunk0017_182_1	65.5933	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207307053	207307729	-41648693	+	HAL1	LINE	L1	562	1224	-1283	3
chr1	207393577	207393578	chunk0017_194_1	21.53913	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	207393348	207393722	-41562700	+	L1MC1	LINE	L1	5494	5883	-625	3
chr1	207591429	207591430	chunk0017_199_1	9.57048	AR_DHT_Control	chr1	207589320	207594612	-41361810	+	L1PA7	LINE	L1	1034	6325	-2	3
chr1	207628975	207628976	chunk0017_200_1	11.5972	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207628929	207629199	-41327223	-	CR1_Mam	LINE	CR1	-587	1617	1338	3
chr1	207680339	207680340	chunk0017_203_1	25.043	AR_DHT_Control	chr1	207680333	207680542	-41275880	+	L1MD2	LINE	L1	6132	6343	-16	3
chr1	207884439	207884440	chunk0017_214_1	169.5135	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207883773	207884442	-41071980	+	L2a	LINE	L2	2610	3400	-26	3
chr1	207938286	207938287	chunk0017_216_1	9.07871	AR_DHT_Control	chr1	207938136	207938469	-41017953	-	MER57C2	LTR	ERV1	-44	390	1	3
chr1	207992957	207992958	chunk0017_223_1	24.6495	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	207992936	207993356	-40963066	-	Tigger16a	DNA	TcMar-Tigger	0	957	517	3
chr1	208051768	208051769	chunk0017_231_1	12.86165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	208051734	208051839	-40904583	-	L2c	LINE	L2	-2	3385	3258	3
chr1	208055835	208055836	chunk0017_233_1	19.86415	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	208055788	208055892	-40900530	-	UCON7	DNA?	DNA?	-260	133	34	3
chr1	208075498	208075499	chunk0017_234_1	8.16452	AR_DHT_Control	chr1	208075361	208075776	-40880646	-	L1MC4a	LINE	L1	-416	7466	7079	3
chr1	208203757	208203758	chunk0017_238_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	208203712	208203873	-40752549	+	MIRc	SINE	MIR	88	249	-19	3
chr1	208497038	208497039	chunk0017_245_1	6.79294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	208492081	208497792	-40458630	-	L1PA16	LINE	L1	-1149	5700	2	3
chr1	208499719	208499720	chunk0017_246_1	14.33706	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	208499500	208499884	-40456538	-	MER97b	DNA	hAT-Tip100	-276	773	375	3
chr1	208515611	208515612	chunk0017_249_1	13.35622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	208515133	208515697	-40440725	-	MER41B	LTR	ERV1	-11	543	1	3
chr1	209526357	209526358	chunk0017_261_1	8.97868	AR_DHT_Control	chr1	209525937	209526393	-39430029	+	L2c	LINE	L2	2919	3377	-10	3
chr1	209611196	209611197	chunk0017_266_1	50.3505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	209611032	209611249	-39345173	-	MER58A	DNA	hAT-Charlie	-3	221	5	3
chr1	209785840	209785841	chunk0017_277_1	28.8459	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	209785698	209785904	-39170518	-	L2b	LINE	L2	0	3387	3176	3
chr1	209823911	209823912	chunk0017_281_1	54.9114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	209823909	209824040	-39132382	+	L2c	LINE	L2	3244	3378	-9	3
chr1	209856585	209856586	chunk0017_283_1	6.69935	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	209856207	209856624	-39099798	+	MLT1J	LTR	ERVL-MaLR	4	460	-52	3
chr1	209900357	209900358	chunk0017_284_1	6.9031	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	209900042	209900645	-39055777	+	LTR50	LTR	ERVL	9	706	-89	3
chr1	210273424	210273425	chunk0017_288_1	19.6069	AR_DHT_Control	chr1	210273291	210274100	-38682322	-	Tigger3b	DNA	TcMar-Tigger	0	1231	457	3
chr1	211146090	211146091	chunk0017_301_1	6.86162	AR_DHT_Control	chr1	211145938	211146284	-37810138	+	L2	LINE	L2	1078	1455	-1964	3
chr1	211180273	211180274	chunk0017_305_1	133.5862	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	211179769	211180742	-37775680	-	L1MC2	LINE	L1	-25	6319	5308	3
chr1	211187398	211187399	chunk0017_306_1	4.26208	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211187315	211188203	-37768219	-	L1MC4	LINE	L1	-385	7657	6535	3
chr1	211236695	211236696	chunk0017_312_1	4.79185	AR_DHT_Control	chr1	211236672	211236752	-37719670	+	Tigger3b	DNA	TcMar-Tigger	2	63	-1168	3
chr1	211237762	211237763	chunk0017_313_1	26.7525	AR_DHT_Control	chr1	211237574	211237790	-37718632	+	Tigger3b	DNA	TcMar-Tigger	291	601	-1	3
chr1	211392133	211392134	chunk0017_321_1	24.9065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	211392054	211392413	-37564009	-	L2c	LINE	L2	-1	3386	3041	3
chr1	211461817	211461818	chunk0017_323_1	11.1716	AR_DHT_Control	chr1	211461513	211463073	-37493349	+	L1MA1	LINE	L1	5194	6785	-780	3
chr1	211496745	211496746	chunk0017_328_1	25.75972	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211496696	211496778	-37459644	+	Tigger17c	DNA	TcMar-Tigger	1	85	-1103	3
chr1	211530255	211530256	chunk0017_332_1	45.40211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	211529845	211530289	-37426133	+	L2b	LINE	L2	2977	3375	0	3
chr1	211703792	211703793	chunk0017_341_1	6.39136	AR_DHT_Control	chr1	211703337	211703813	-37252609	+	MLT1C	LTR	ERVL-MaLR	1	467	0	3
chr1	211734969	211734970	chunk0017_343_1	29.16904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211734880	211735016	-37221406	+	L2a	LINE	L2	3274	3417	-9	3
chr1	211742568	211742569	chunk0017_345_1	5.69226	AR_DHT_Control	chr1	211742398	211742740	-37213682	-	Charlie2a	DNA	hAT-Charlie	-2353	508	104	3
chr1	211782144	211782145	chunk0017_346_1	9.04976	AR_DHT_Control	chr1	211781913	211782418	-37174004	-	L1ME4a	LINE	L1	-4	6120	5575	3
chr1	211808758	211808759	chunk0017_348_1	71.35428	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211808733	211808781	-37147641	-	MER58D	DNA	hAT-Charlie	0	386	339	3
chr1	211862607	211862608	chunk0017_352_1	41.331	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	211862226	211862757	-37093665	-	L1MC1	LINE	L1	-894	5779	5296	3
chr1	211897185	211897186	chunk0017_355_1	130.4808	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	211897006	211897628	-37058794	+	Tigger6a	DNA	TcMar-Tigger	1	633	-450	3
chr1	211940166	211940167	chunk0017_362_1	6.58135	AR_DHT_Control	chr1	211940106	211940225	-37016197	+	MER91B	DNA	hAT-Tip100	20	125	-65	3
chr1	211947993	211947994	chunk0017_363_1	7.87199	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	211947569	211948060	-37008362	-	LTR22B	LTR	ERVK	0	492	1	3
chr1	212005099	212005100	chunk0017_367_1	155.03278	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	212004704	212005486	-36950936	+	L1ME3B	LINE	L1	5312	6201	-41	3
chr1	212061130	212061131	chunk0017_372_1	5.6503	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	212061067	212061262	-36895160	+	AluJb	SINE	Alu	86	297	-15	3
chr1	212088683	212088684	chunk0017_373_1	10.0431	AR_DHT_Control	chr1	212088342	212088780	-36867642	-	L2c	LINE	L2	-8	3379	2917	3
chr1	212133463	212133464	chunk0017_377_1	230.8828	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	212132860	212133701	-36822721	+	L1MD2	LINE	L1	5049	5919	-440	3
chr1	212189576	212189577	chunk0017_381_1	18.34006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	212189238	212189685	-36766737	+	MER115	DNA	hAT-Tip100	74	556	-137	3
chr1	212566113	212566114	chunk0017_399_1	7.02986	AR_DHT_Control	chr1	212566106	212566235	-36390187	+	MIRc	SINE	MIR	17	144	-124	3
chr1	212598630	212598631	chunk0017_401_1	8.24841	AR_DHT_Control	chr1	212598325	212599174	-36357248	-	L1MA2	LINE	L1	0	6304	5442	3
chr1	212763932	212763933	chunk0017_406_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	212763265	212764570	-36191852	+	L1PB2	LINE	L1	2626	4004	-2858	3
chr1	212860751	212860752	chunk0017_409_1	10.8679	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	212860541	212860795	-36095627	+	L2a	LINE	L2	3142	3386	-1	3
chr1	212881934	212881935	chunk0017_410_1	9.21264	AR_DHT_Control	chr1	212881922	212882472	-36073950	+	L1ME3C	LINE	L1	5387	6003	-239	3
chr1	213070693	213070694	chunk0017_416_1	27.6681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	213070430	213070829	-35885593	-	MER57B1	LTR	ERV1	0	401	1	3
chr1	213099946	213099947	chunk0017_417_1	124.4508	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	213099297	213100402	-35856020	-	L1ME2z	LINE	L1	-3	6441	5177	3
chr1	213102643	213102644	chunk0017_421_1	51.6386	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	213102383	213102661	-35853761	-	MLT1J	LTR	ERVL-MaLR	-178	334	11	3
chr1	213196689	213196690	chunk0017_427_1	10.4825	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	213195847	213196833	-35759589	-	L1PB1	LINE	L1	-359	6508	5516	3
chr1	213365923	213365924	chunk0017_431_1	19.24972	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	213365756	213365970	-35590452	-	MER58A	DNA	hAT-Charlie	0	224	6	3
chr1	213518653	213518654	chunk0017_432_1	24.4073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	213518635	213518801	-35437621	-	Helitron1Nb_Mam	RC	Helitron	-946	170	1	3
chr1	213705923	213705924	chunk0017_434_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	213704412	213706571	-35249851	-	L1MA2	LINE	L1	-5211	2354	105	3
chr1	213741559	213741560	chunk0017_436_1	45.13473	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	213741328	213741600	-35214822	-	Tigger9a	DNA	TcMar-Tigger	-386	346	56	3
chr1	214181028	214181029	chunk0017_439_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	214179457	214181164	-34775258	+	L1MEc	LINE	L1	187	2145	-4255	3
chr1	214216916	214216917	chunk0017_441_1	43.25363	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	214216907	214217011	-34739411	-	L2b	LINE	L2	-2	3373	3267	3
chr1	214251363	214251364	chunk0017_446_1	5.00158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	214251321	214251397	-34705025	-	MER5B	DNA	hAT-Charlie	-108	70	1	3
chr1	214460668	214460669	chunk0017_456_1	9.34168	AR_DHT_Control	chr1	214460645	214460725	-34495697	+	L2b	LINE	L2	2984	3065	-322	3
chr1	214584209	214584210	chunk0017_466_1	91.1219	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	214583632	214584474	-34371948	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	850	-218	3
chr1	214820863	214820864	chunk0018_2_1	9.08241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	214820112	214823087	-34133335	-	L1PB1	LINE	L1	-434	6183	3197	3
chr1	215092767	215092768	chunk0018_7_1	7.67158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	215092373	215092781	-33863641	-	MER68C	LTR	ERVL	0	419	1	3
chr1	215109774	215109775	chunk0018_8_1	51.0978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	215109068	215111382	-33845040	-	L1MA4A	LINE	L1	-8	6881	4570	3
chr1	215164817	215164818	chunk0018_14_1	13.2288	AR_DHT_Control	chr1	215164678	215164950	-33791472	+	L2b	LINE	L2	3088	3375	0	3
chr1	215181826	215181827	chunk0018_15_1	5.20246	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	215176327	215183201	-33773221	-	L1PA11	LINE	L1	-1	6876	1	3
chr1	215365304	215365305	chunk0018_18_1	7.91804	AR_DHT_Control	chr1	215362981	215366038	-33590384	-	L1P2	LINE	L1	-3053	3093	35	3
chr1	215458451	215458452	chunk0018_19_1	5.84343	AR_DHT_Control	chr1	215458394	215458940	-33497482	+	LTR40a	LTR	ERVL	4	519	0	3
chr1	215540377	215540378	chunk0018_24_1	79.2541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	215540110	215540507	-33415915	-	LTR57	LTR	ERVL	0	411	6	3
chr1	215547147	215547148	chunk0018_27_1	20.3953	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	215547104	215547328	-33409094	-	MER58A	DNA	hAT-Charlie	-4	220	1	3
chr1	215612625	215612626	chunk0018_33_1	13.28851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	215612599	215612821	-33343601	+	MIRb	SINE	MIR	25	260	-8	3
chr1	215637355	215637356	chunk0018_39_1	92.4462	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	215637251	215637416	-33319006	+	MER5A	DNA	hAT-Charlie	9	189	0	3
chr1	215729057	215729058	chunk0018_43_1	29.77026	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	215728994	215729237	-33227185	+	MLT1H2	LTR	ERVL-MaLR	23	275	-214	3
chr1	216261818	216261819	chunk0018_47_1	6.18774	AR_DHT_Control	chr1	216261663	216262805	-32693617	+	L1MA5	LINE	L1	1138	2272	-4517	3
chr1	216316721	216316722	chunk0018_49_1	9.90105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	216316649	216316800	-32639622	-	L1P3	LINE	L1	-680	5494	5343	3
chr1	216399669	216399670	chunk0018_50_1	9.50609	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	216399585	216402398	-32554024	+	L1MDa	LINE	L1	640	3344	-3193	3
chr1	216451965	216451966	chunk0018_52_1	45.62345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	216451687	216452007	-32504415	-	Tigger2a	DNA	TcMar-Tigger	0	434	1	3
chr1	216767075	216767076	chunk0018_61_1	52.21491	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	216766985	216767134	-32189288	-	MIR3	SINE	MIR	0	208	53	3
chr1	216816395	216816396	chunk0018_62_1	8.95381	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	216816305	216816436	-32139986	+	L1MA8	LINE	L1	6157	6290	-1	3
chr1	217152389	217152390	chunk0018_74_1	7.14391	AR_DHT_Control	chr1	217152330	217152547	-31803875	+	MamSINE1	SINE	tRNA-RTE	6	256	-34	3
chr1	217170006	217170007	chunk0018_76_1	7.42871	AR_DHT_Control	chr1	217169968	217170315	-31786107	-	L1MD2	LINE	L1	-2	6357	5974	3
chr1	217468331	217468332	chunk0018_83_1	15.49235	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	217467200	217468505	-31487917	+	L1MC5a	LINE	L1	782	2935	-56	3
chr1	217532622	217532623	chunk0018_89_1	11.6225	AR_DHT_Control	chr1	217532423	217532827	-31423595	-	L2b	LINE	L2	-1	3374	2933	3
chr1	217568367	217568368	chunk0018_91_1	41.63545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	217568303	217569103	-31387319	-	L2a	LINE	L2	0	3426	2530	3
chr1	217574717	217574718	chunk0018_92_1	6.40219	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	217574599	217574826	-31381596	-	MIRb	SINE	MIR	-14	254	37	3
chr1	217639449	217639450	chunk0018_95_1	11.7718	AR_DHT_Control	chr1	217638629	217639521	-31316901	+	L1MEj	LINE	L1	531	1466	-694	3
chr1	217724897	217724898	chunk0018_96_1	7.53305	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	217724734	217725466	-31230956	-	L1M5	LINE	L1	-693	5431	4595	3
chr1	217764635	217764636	chunk0018_97_1	5.12066	AR_DHT_Control	chr1	217763904	217764905	-31191517	-	L1MC1	LINE	L1	-5	6503	5465	3
chr1	217921950	217921951	chunk0018_99_1	5.76104	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	217921635	217922129	-31034293	-	MER70C	LTR	ERVL	-21	510	4	3
chr1	218131597	218131598	chunk0018_101_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	218131309	218131727	-30824695	+	L1MC3	LINE	L1	672	1104	-5296	3
chr1	218138556	218138557	chunk0018_102_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	218138166	218138666	-30817756	-	MER66B	LTR	ERV1	0	486	1	3
chr1	218319561	218319562	chunk0018_115_1	91.9692	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	218319363	218319621	-30636801	-	L1MC5a	LINE	L1	-1068	1709	1444	3
chr1	218470443	218470444	chunk0018_121_1	15.1335	AR_DHT_Control	chr1	218469518	218470780	-30485642	+	ERVL-E-int	LTR	ERVL	3548	4880	-787	3
chr1	218490642	218490643	chunk0018_125_1	95.25813	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	218490380	218490655	-30465767	+	L2a	LINE	L2	3143	3426	0	3
chr1	218538451	218538452	chunk0018_128_1	81.29692	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	218538289	218538646	-30417776	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	3
chr1	218582958	218582959	chunk0018_134_1	7.3267	AR_DHT_Control	chr1	218581812	218583515	-30372907	-	L1ME2	LINE	L1	-3564	3673	1829	3
chr1	218646531	218646532	chunk0018_140_1	179.7829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	218646458	218646605	-30309817	-	LTR40a	LTR	ERVL	-372	147	1	3
chr1	218650855	218650856	chunk0018_141_1	159.17553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	218647497	218650955	-30305467	-	L1PA7	LINE	L1	0	6154	2682	3
chr1	218656519	218656520	chunk0018_143_1	16.9165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	218656471	218656553	-30299869	+	L2c	LINE	L2	3303	3424	-2	3
chr1	218848177	218848178	chunk0018_161_1	18.5196	AR_DHT_Control	chr1	218848091	218848287	-30108135	-	Tigger19a	DNA	TcMar-Tigger	-63	260	60	3
chr1	219022140	219022141	chunk0018_171_1	7.37742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	219021218	219025718	-29930704	+	L1MA3	LINE	L1	17	7561	-163	3
chr1	219213822	219213823	chunk0018_183_1	152.12502	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	219213154	219214509	-29741913	-	L1MEc	LINE	L1	-1222	5097	3686	3
chr1	219232855	219232856	chunk0018_184_1	5.20246	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219232353	219233485	-29722937	+	L1MB2	LINE	L1	4948	6139	-32	3
chr1	219249803	219249804	chunk0018_185_1	8.32058	AR_DHT_Control	chr1	219249274	219250440	-29705982	-	L1ME3A	LINE	L1	-226	6120	4886	3
chr1	219254922	219254923	chunk0018_186_1	52.8052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219250562	219255064	-29701358	-	L1PA14	LINE	L1	-262	7894	3343	3
chr1	219354617	219354618	chunk0018_201_1	11.9724	AR_DHT_Control	chr1	219354495	219354704	-29601718	+	L1MC3	LINE	L1	1330	1537	-4863	3
chr1	219371770	219371771	chunk0018_205_1	5.08478	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219371512	219371907	-29584515	+	MER57B2	LTR	ERV1	1	403	0	3
chr1	219414441	219414442	chunk0018_206_1	39.84265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219414428	219414534	-29541888	+	MIR	SINE	MIR	45	170	-92	3
chr1	219521484	219521485	chunk0018_214_1	180.7245	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219521364	219522052	-29434370	+	MER45R	DNA	hAT-Tip100	350	1032	-549	3
chr1	219531935	219531936	chunk0018_217_1	14.791	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219531867	219532306	-29424116	+	Tigger2a	DNA	TcMar-Tigger	1	433	-1	3
chr1	219713411	219713412	chunk0018_226_1	24.77216	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	219713373	219713822	-29242600	-	Charlie21a	DNA	hAT-Charlie	-596	617	106	3
chr1	219774486	219774487	chunk0018_230_1	8.27376	AR_DHT_Control	chr1	219773819	219774536	-29181886	-	L2a	LINE	L2	-1225	2194	1441	3
chr1	219850959	219850960	chunk0018_232_1	5.16131	AR_DHT_Control	chr1	219846295	219852569	-29103853	+	L1PB2	LINE	L1	1	6502	-365	3
chr1	220226930	220226931	chunk0018_252_1	6.73066	AR_DHT_Control	chr1	220226743	220227146	-28729276	+	MLT1B	LTR	ERVL-MaLR	5	390	0	3
chr1	220238911	220238912	chunk0018_255_1	9.79599	AR_DHT_Control	chr1	220238612	220239005	-28717417	+	L2c	LINE	L2	3000	3383	-4	3
chr1	220438611	220438612	chunk0018_263_1	92.11018	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	220438583	220439041	-28517381	+	MLT2B4	LTR	ERVL	1	556	0	3
chr1	220458254	220458255	chunk0018_266_1	5.84343	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	220458112	220458453	-28497969	+	MER61B	LTR	ERV1	1	427	0	3
chr1	220474930	220474931	chunk0018_268_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	220474850	220476259	-28480163	-	LTR12C	LTR	ERV1	0	1579	3	3
chr1	220492993	220492994	chunk0018_269_1	45.9983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	220492832	220493007	-28463415	-	MamRep605	LTR?	LTR?	-123	726	551	3
chr1	220541361	220541362	chunk0018_270_1	6.48643	AR_DHT_Control	chr1	220541232	220542008	-28414414	-	L1M4c	LINE	L1	-3108	3274	2251	3
chr1	220553280	220553281	chunk0018_272_1	96.89846	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	220551647	220554324	-28402098	-	ERVL-int	LTR	ERVL	-245	5512	2712	3
chr1	220565826	220565827	chunk0018_274_1	8.51012	AR_DHT_Control	chr1	220565780	220565899	-28390523	-	LTR79	LTR	ERVL	-211	316	190	3
chr1	220605191	220605192	chunk0018_279_1	32.1834	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	220605005	220605262	-28351160	-	MER103C	DNA	hAT-Charlie	-56	241	2	3
chr1	220709593	220709594	chunk0018_284_1	6.9063	AR_DHT_Control	chr1	220709051	220709615	-28246807	+	MER21B	LTR	ERVL	290	934	-4	3
chr1	220727515	220727516	chunk0018_285_1	16.52433	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	220727098	220727610	-28228812	-	L1ME3B	LINE	L1	-32	6210	5675	3
chr1	220812475	220812476	chunk0018_298_1	125.458	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	220812265	220812671	-28143751	-	L2a	LINE	L2	-493	2926	2489	3
chr1	221007637	221007638	chunk0018_305_1	16.74961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221007219	221007820	-27948602	-	L1MD3	LINE	L1	-513	7482	6897	3
chr1	221143497	221143498	chunk0018_311_1	104.64417	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221142911	221143758	-27812664	+	L1MEh	LINE	L1	702	1642	-593	3
chr1	221283033	221283034	chunk0018_319_1	43.5419	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	221282351	221283286	-27673136	+	L2c	LINE	L2	2077	3192	-195	3
chr1	221302329	221302330	chunk0018_321_1	23.13135	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221302261	221302389	-27654033	-	MIRc	SINE	MIR	-21	247	117	3
chr1	221423883	221423884	chunk0018_337_1	32.816	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	221423186	221424358	-27532064	+	L1MEd	LINE	L1	2824	4133	-2013	3
chr1	221525998	221525999	chunk0018_342_1	9.89432	AR_DHT_Control	chr1	221525975	221526183	-27430239	+	MER3	DNA	hAT-Charlie	1	209	0	3
chr1	221556871	221556872	chunk0018_345_1	3.6037	AR_DHT_Control	chr1	221556686	221556909	-27399513	+	MIR	SINE	MIR	2	260	-2	3
chr1	221561357	221561358	chunk0018_346_1	21.03624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221561291	221561586	-27394836	+	CR1-3_Croc	LINE	CR1	2533	2833	-772	3
chr1	221579345	221579346	chunk0018_348_1	68.8977	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221579206	221579541	-27376881	+	L1MEc	LINE	L1	2488	2812	-3507	3
chr1	221603157	221603158	chunk0018_351_1	24.08271	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221603069	221604379	-27352043	+	L1ME3B	LINE	L1	4749	6216	-26	3
chr1	221727501	221727502	chunk0018_361_1	14.4642	AR_DHT_Control	chr1	221727384	221727539	-27228883	+	MIR3	SINE	MIR	32	205	-3	3
chr1	221929214	221929215	chunk0018_368_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	221927607	221931877	-27024545	+	L1MA3	LINE	L1	11	4343	-3222	3
chr1	221941419	221941420	chunk0018_369_1	8.10772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	221941333	221941864	-27014558	-	MER31-int	LTR	ERV1	-383	5804	5266	3
chr1	222140457	222140458	chunk0018_375_1	8.27376	AR_DHT_Control	chr1	222139228	222144047	-26812375	+	L1MA3	LINE	L1	2892	7724	0	3
chr1	222274372	222274373	chunk0018_379_1	41.1501	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	222273924	222274381	-26682041	-	MLT2B1	LTR	ERVL	-41	479	1	3
chr1	222286222	222286223	chunk0018_381_1	5.69781	AR_DHT_Control	chr1	222285929	222286386	-26670036	-	LTR40c	LTR	ERVL	-2	463	1	3
chr1	222546365	222546366	chunk0018_391_1	85.2163	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	222546249	222546395	-26410027	+	MIRb	SINE	MIR	10	181	-87	3
chr1	222611411	222611412	chunk0018_398_1	64.171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	222610884	222611718	-26344704	-	L1MB8	LINE	L1	-9	6169	5322	3
chr1	222615654	222615655	chunk0018_400_1	15.35921	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	222615172	222615888	-26340534	-	L2a	LINE	L2	-5	3421	2647	3
chr1	222642623	222642624	chunk0018_406_1	22.03804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	222642311	222643403	-26313019	-	L1MC5	LINE	L1	-2014	7290	6611	3
chr1	222708975	222708976	chunk0018_419_1	11.7904	AR_DHT_Control	chr1	222708928	222709151	-26247271	-	L2a	LINE	L2	-41	3385	3228	3
chr1	222777705	222777706	chunk0018_423_1	45.78915	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	222777613	222777741	-26178681	-	Tigger3c	DNA	TcMar-Tigger	0	602	475	3
chr1	222797378	222797379	chunk0018_425_1	18.3151	AR_DHT_Control	chr1	222797368	222797450	-26158972	+	L2b	LINE	L2	3286	3367	-8	3
chr1	222946598	222946599	chunk0018_441_1	347.2321	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	222946538	222946999	-26009423	-	L2c	LINE	L2	0	3387	2840	3
chr1	223007474	223007475	chunk0018_446_1	11.9084	AR_DHT_Control	chr1	223007256	223007488	-25948934	-	L3	LINE	CR1	-17	4082	3787	3
chr1	223182561	223182562	chunk0019_3_1	74.9148	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	223181805	223183305	-25773117	+	L1MD1	LINE	L1	207	2017	-4616	3
chr1	223188437	223188438	chunk0019_5_1	21.23894	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	223187593	223188455	-25767967	+	L1MD1	LINE	L1	5788	6625	-8	3
chr1	223326605	223326606	chunk0019_11_1	47.6204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	223325513	223327492	-25628930	+	L1PB3	LINE	L1	4131	6152	-2	3
chr1	223419988	223419989	chunk0019_14_1	39.59762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	223419837	223420066	-25536356	-	MIRb	SINE	MIR	-8	260	13	3
chr1	223518663	223518664	chunk0019_18_1	40.1609	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	223517923	223519189	-25437233	+	L1PB	LINE	L1	4242	5505	-646	3
chr1	223623377	223623378	chunk0019_20_1	4.89968	AR_DHT_Control	chr1	223623257	223623514	-25332908	-	MIRb	SINE	MIR	-8	260	4	3
chr1	223650636	223650637	chunk0019_21_1	8.46211	AR_DHT_Control	chr1	223650581	223650798	-25305624	+	MLT1K	LTR	ERVL-MaLR	383	595	0	3
chr1	223688761	223688762	chunk0019_22_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	223688595	223688857	-25267565	+	LTR16A	LTR	ERVL	167	443	-8	3
chr1	223706622	223706623	chunk0019_26_1	16.62633	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	223706618	223706714	-25249708	+	MIRb	SINE	MIR	116	214	-54	3
chr1	223786004	223786005	chunk0019_32_1	94.6055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	223785985	223786021	-25170401	+	(GGAA)n	Simple_repeat	Simple_repeat	1	36	0	3
chr1	224012708	224012709	chunk0019_37_1	14.13788	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	224011690	224016553	-24939869	+	(AATGG)n	Simple_repeat	Simple_repeat	1	4914	0	3
chr1	224013934	224013935	chunk0019_39_1	9.95159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	224011690	224016553	-24939869	+	(AATGG)n	Simple_repeat	Simple_repeat	1	4914	0	3
chr1	224014898	224014899	chunk0019_40_1	23.62083	Merged_Lncap_AR_Veh;AR_DHT_Control	chr1	224011690	224016553	-24939869	+	(AATGG)n	Simple_repeat	Simple_repeat	1	4914	0	3
chr1	224107046	224107047	chunk0019_45_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	224106413	224107053	-24849369	-	LTR41	LTR	ERVL	-70	698	1	3
chr1	224113463	224113464	chunk0019_46_1	5.60881	AR_DHT_Control	chr1	224113385	224113726	-24842696	-	L1MB7	LINE	L1	-17	6167	5812	3
chr1	224132945	224132946	chunk0019_48_1	22.0037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	224132823	224133377	-24823045	+	L1MB7	LINE	L1	5590	6164	-20	3
chr1	224139338	224139339	chunk0019_50_1	111.78298	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	224139321	224139461	-24816961	-	L1MC4	LINE	L1	0	8042	7911	3
chr1	224143015	224143016	chunk0019_53_1	62.5088	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	224142952	224143235	-24813187	+	AluSx	SINE	Alu	136	299	-13	3
chr1	224182503	224182504	chunk0019_56_1	7.92996	AR_DHT_Control	chr1	224182372	224182518	-24773904	-	L1MC5	LINE	L1	-577	8727	8582	3
chr1	224262589	224262590	chunk0019_66_1	69.0973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	224262195	224263186	-24693236	+	HAL1	LINE	L1	1457	2468	-39	3
chr1	224312120	224312121	chunk0019_74_1	10.50997	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	224311954	224312176	-24644246	+	MIR	SINE	MIR	11	258	-4	3
chr1	224317465	224317466	chunk0019_77_1	26.72465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	224317311	224317572	-24638850	-	L2c	LINE	L2	-116	3271	2977	3
chr1	224323635	224323636	chunk0019_78_1	7.24914	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	224322965	224323966	-24632456	+	MLT1B-int	LTR	ERVL-MaLR	162	1132	-239	3
chr1	224326767	224326768	chunk0019_79_1	83.3784	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	224326739	224326878	-24629544	+	MER119	DNA	hAT-Charlie	25	169	-414	3
chr1	224362839	224362840	chunk0019_81_1	9.443	AR_DHT_Control	chr1	224362779	224363032	-24593390	-	HAL1	LINE	L1	-1124	1383	1110	3
chr1	224543372	224543373	chunk0019_90_1	8.58456	AR_DHT_Control	chr1	224542842	224543606	-24412816	+	MER21C	LTR	ERVL	3	821	-117	3
chr1	224579470	224579471	chunk0019_91_1	6.13915	AR_DHT_Control	chr1	224578263	224579554	-24376868	-	HAL1	LINE	L1	-486	2021	596	3
chr1	224884545	224884546	chunk0019_101_1	12.8381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	224884250	224884559	-24071863	-	LTR40A1	LTR	ERVL	-107	477	155	3
chr1	224935699	224935700	chunk0019_104_1	8.21408	AR_DHT_Control	chr1	224933915	224939048	-24017374	+	L1MA4	LINE	L1	2179	7431	-288	3
chr1	225017641	225017642	chunk0019_105_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	225017382	225020215	-23936207	+	L1PA16	LINE	L1	1096	3959	-2807	3
chr1	225036957	225036958	chunk0019_106_1	19.75265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225036873	225037685	-23918737	-	L1PA14	LINE	L1	-3647	3918	3097	3
chr1	225065669	225065670	chunk0019_108_1	244.4836	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	225065244	225066495	-23889927	-	L1MA7	LINE	L1	-26	6265	4989	3
chr1	225116166	225116167	chunk0019_111_1	10.7058	AR_DHT_Control	chr1	225115775	225116388	-23840034	-	L2c	LINE	L2	-1	3386	2726	3
chr1	225138362	225138363	chunk0019_112_1	8.41215	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	225137647	225138967	-23817455	-	L1PA11	LINE	L1	-5211	2370	1	3
chr1	225208861	225208862	chunk0019_113_1	24.83107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225208741	225209353	-23747069	-	L1MCc	LINE	L1	-5297	1831	1128	3
chr1	225307627	225307628	chunk0019_116_1	20.64631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225307610	225307756	-23648666	+	MIR	SINE	MIR	3	152	-110	3
chr1	225454266	225454267	chunk0019_122_1	42.73714	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	225454226	225454363	-23502059	-	L2a	LINE	L2	0	3426	3267	3
chr1	225490126	225490127	chunk0019_123_1	15.1095	AR_DHT_Control	chr1	225490067	225490151	-23466271	-	MIRb	SINE	MIR	-141	127	40	3
chr1	225629945	225629946	chunk0019_131_1	87.1502	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225629806	225630036	-23326386	-	Tigger19a	DNA	TcMar-Tigger	0	323	76	3
chr1	225657678	225657679	chunk0019_134_1	86.2791	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225657674	225657835	-23298587	-	MER130	DNA	DNA	-1241	353	169	3
chr1	225744352	225744353	chunk0019_145_1	48.8238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225744068	225744390	-23212032	+	L1PA10	LINE	L1	5830	6149	-19	3
chr1	225807562	225807563	chunk0019_149_1	6.5427	AR_DHT_Control	chr1	225807483	225807570	-23148852	+	L5	LINE	RTE-X	2170	2255	-10	3
chr1	225820933	225820934	chunk0019_151_1	28.7911	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225820587	225820964	-23135458	+	L2c	LINE	L2	2989	3378	-9	3
chr1	225891263	225891264	chunk0019_158_1	42.08191	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	225891219	225891490	-23064932	+	LTR32	LTR	ERVL	1	265	-192	3
chr1	226135085	226135086	chunk0019_170_1	5.53391	AR_DHT_Control	chr1	226134516	226135223	-22821199	+	L2b	LINE	L2	2590	3371	-4	3
chr1	226400966	226400967	chunk0019_174_1	7.70585	AR_DHT_Control	chr1	226400676	226401090	-22555332	+	LTR16D	LTR	ERVL	170	675	0	3
chr1	226421023	226421024	chunk0019_176_1	29.1306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	226420970	226421418	-22535004	-	MLT1A	LTR	ERVL-MaLR	0	374	5	3
chr1	226479568	226479569	chunk0019_180_1	24.7319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	226479467	226480338	-22476084	-	HAL1	LINE	L1	-283	2224	1269	3
chr1	226534671	226534672	chunk0019_181_1	7.44578	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	226534589	226534989	-22421433	+	MLT1K	LTR	ERVL-MaLR	3	429	-166	3
chr1	226553811	226553812	chunk0019_183_1	79.685	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	226553738	226553929	-22402493	+	HAL1ME	LINE	L1	1974	2182	-283	3
chr1	226632660	226632661	chunk0019_186_1	40.6201	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	226632536	226632860	-22323562	-	MamRep434	DNA	TcMar-Tigger	-55	371	21	3
chr1	226671507	226671508	chunk0019_189_1	16.91046	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	226671449	226672119	-22284303	-	L2a	LINE	L2	0	3426	2692	3
chr1	226709170	226709171	chunk0019_192_1	14.5208	AR_DHT_Control	chr1	226709167	226709257	-22247165	-	MER53	DNA	hAT	0	193	104	3
chr1	226711469	226711470	chunk0019_193_1	7.6291	AR_DHT_Control	chr1	226711443	226711477	-22244945	+	(TG)n	Simple_repeat	Simple_repeat	1	35	0	3
chr1	226833371	226833372	chunk0019_199_1	8.75738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	226833148	226833499	-22122923	-	MER21B	LTR	ERVL	-55	813	479	3
chr1	226899327	226899328	chunk0019_201_1	6.20921	AR_DHT_Control	chr1	226898913	226899429	-22056993	-	L1ME3Cz	LINE	L1	-786	5360	4807	3
chr1	226951777	226951778	chunk0019_204_1	8.81034	AR_DHT_Control	chr1	226951700	226951940	-22004482	-	MER58A	DNA	hAT-Charlie	-31	193	1	3
chr1	227002059	227002060	chunk0019_208_1	20.34634	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	227001968	227002213	-21954209	+	MER46C	DNA	TcMar-Tigger	91	336	-2	3
chr1	227085751	227085752	chunk0019_212_1	26.36101	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227085471	227085823	-21870599	-	L1M7	LINE	L1	-5626	592	245	3
chr1	227114569	227114570	chunk0019_214_1	30.3983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227114149	227114647	-21841775	+	L1MEd	LINE	L1	1330	1843	-5260	3
chr1	227154742	227154743	chunk0019_217_1	108.9822	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227153494	227155030	-21801392	+	L1MEd	LINE	L1	3236	4780	-1366	3
chr1	227269151	227269152	chunk0019_218_1	4.96796	AR_DHT_Control	chr1	227269037	227269253	-21687169	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr1	227306305	227306306	chunk0019_223_1	6.6833	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227306237	227306688	-21649734	+	MamRTE1	LINE	RTE-BovB	3262	3751	-61	3
chr1	227306482	227306483	chunk0019_224_1	7.77075	AR_DHT_Control	chr1	227306237	227306688	-21649734	+	MamRTE1	LINE	RTE-BovB	3262	3751	-61	3
chr1	227325047	227325048	chunk0019_227_1	22.32784	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	227324889	227325261	-21631161	+	Plat_L3	LINE	CR1	3224	3582	-4	3
chr1	227344464	227344465	chunk0019_228_1	100.45743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	227344442	227344592	-21611830	-	MIR3	SINE	MIR	-4	204	63	3
chr1	227369235	227369236	chunk0019_231_1	14.5137	AR_DHT_Control	chr1	227369103	227369273	-21587149	+	MER5A1	DNA	hAT-Charlie	1	166	0	3
chr1	227374757	227374758	chunk0019_234_1	16.2666	AR_DHT_Control	chr1	227374747	227374970	-21581452	+	L2b	LINE	L2	2846	3082	-337	3
chr1	227385491	227385492	chunk0019_236_1	104.9448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	227385272	227385995	-21570427	+	L1MC1	LINE	L1	5785	6503	-5	3
chr1	227399705	227399706	chunk0019_238_1	76.75812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	227399082	227400017	-21556405	-	L1MC1	LINE	L1	-58	6275	5322	3
chr1	227406605	227406606	chunk0019_240_1	43.4011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	227406288	227407582	-21548840	+	L1PB1	LINE	L1	5357	6617	0	3
chr1	227442501	227442502	chunk0019_244_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227442413	227442574	-21513848	-	L2c	LINE	L2	0	3387	3239	3
chr1	227527562	227527563	chunk0019_245_1	13.0632	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227526502	227528154	-21428268	-	L1PB1	LINE	L1	0	6867	5146	3
chr1	227550619	227550620	chunk0019_246_1	5.62266	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	227550095	227551605	-21404817	+	L1PA4	LINE	L1	669	2201	-4298	3
chr1	227579604	227579605	chunk0019_247_1	3.93339	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	227579130	227580326	-21376096	-	L1PA13	LINE	L1	-5527	1258	1	3
chr1	227600411	227600412	chunk0019_248_1	36.3348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227599807	227601555	-21354867	-	L1PA13	LINE	L1	-1	6162	4354	3
chr1	227605547	227605548	chunk0019_249_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	227605192	227606015	-21350407	-	L1MB7	LINE	L1	-1741	4405	3594	3
chr1	227606415	227606416	chunk0019_250_1	14.1597	AR_DHT_Control	chr1	227606015	227607021	-21349401	-	LTR5B	LTR	ERVK	0	1002	1	3
chr1	227670138	227670139	chunk0019_251_1	8.16452	AR_DHT_Control	chr1	227669660	227670143	-21286279	+	L1PA16	LINE	L1	5452	5940	-226	3
chr1	227767532	227767533	chunk0019_254_1	5.92857	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	227767367	227767822	-21188600	+	(GT)n	Simple_repeat	Simple_repeat	1	466	0	3
chr1	227865516	227865517	chunk0019_257_1	23.2155	AR_DHT_Control	chr1	227865344	227865849	-21090573	+	ERV3-16A3_I-int	LTR	ERVL	1395	1847	-3379	3
chr1	228232562	228232563	chunk0019_268_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	228232313	228233285	-20723137	-	L1MB7	LINE	L1	-6514	1003	5	3
chr1	228381573	228381574	chunk0019_269_1	9.55944	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	228381512	228381713	-20574709	-	L1MD1	LINE	L1	-768	5378	5190	3
chr1	228501381	228501382	chunk0019_275_1	28.25882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	228501091	228501759	-20454663	-	MER77B	LTR	ERVL	-6	694	41	3
chr1	228526974	228526975	chunk0019_276_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	228526838	228527171	-20429251	+	L1MB4	LINE	L1	118	475	-6132	3
chr1	228667416	228667417	chunk0019_277_1	196.34025	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	228667158	228667458	-20288964	-	L2b	LINE	L2	-5	3370	3031	3
chr1	228853985	228853986	chunk0019_294_1	56.65999	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	228853984	228854083	-20102339	+	LTR88b	LTR	Gypsy?	723	824	-13	3
chr1	229069674	229069675	chunk0019_313_1	7.02243	AR_DHT_Control	chr1	229069538	229069793	-19886629	-	L1MC	LINE	L1	-628	5705	5448	3
chr1	229085429	229085430	chunk0019_315_1	18.23684	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	229085377	229085557	-19870865	-	L1MC2	LINE	L1	-5923	585	374	3
chr1	229086827	229086828	chunk0019_316_1	6.60988	AR_DHT_Control	chr1	229085845	229087030	-19869392	+	L1MB2	LINE	L1	4962	6164	-7	3
chr1	229114481	229114482	chunk0019_319_1	12.57567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229114378	229114606	-19841816	-	L2c	LINE	L2	0	3387	3135	3
chr1	229191451	229191452	chunk0019_325_1	5.29288	AR_DHT_Control	chr1	229190849	229191640	-19764782	+	L1ME5	LINE	L1	5209	5978	-216	3
chr1	229208996	229208997	chunk0019_329_1	86.83714	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	229208665	229209130	-19747292	-	MER70A	LTR	ERVL	0	472	1	3
chr1	229280689	229280690	chunk0019_338_1	6.9447	AR_DHT_Control	chr1	229280560	229281213	-19675209	-	L1MD1	LINE	L1	0	6633	5965	3
chr1	229320128	229320129	chunk0019_339_1	36.49443	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229319823	229320231	-19636191	-	L1MEf	LINE	L1	-6093	454	24	3
chr1	229336593	229336594	chunk0019_341_1	23.49638	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	229336232	229337678	-19618744	+	HAL1	LINE	L1	376	1902	-605	3
chr1	229396616	229396617	chunk0019_344_1	7.27655	AR_DHT_Control	chr1	229396593	229397128	-19559294	+	MER74A	LTR	ERVL	1	545	-13	3
chr1	229426039	229426040	chunk0019_346_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	229425993	229426256	-19530166	+	MLT1C	LTR	ERVL-MaLR	199	555	0	3
chr1	229485494	229485495	chunk0019_347_1	26.978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229485447	229485582	-19470840	+	HAL1	LINE	L1	2012	2148	-359	3
chr1	229579882	229579883	chunk0019_355_1	18.50678	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	229579859	229579889	-19376533	+	(GTTT)n	Simple_repeat	Simple_repeat	1	31	0	3
chr1	229691787	229691788	chunk0019_360_1	4.83274	AR_DHT_Control	chr1	229691671	229691887	-19264535	-	L2c	LINE	L2	-5	3382	3131	3
chr1	229715192	229715193	chunk0019_361_1	4.81216	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229715068	229715562	-19240860	+	MER66C	LTR	ERV1	1	541	-14	3
chr1	229889156	229889157	chunk0019_371_1	20.5559	AR_DHT_Control	chr1	229888413	229889357	-19067065	+	ERV3-16A3_I-int	LTR	ERVL	746	1892	-3104	3
chr1	229891448	229891449	chunk0019_372_1	7.37376	AR_DHT_Control	chr1	229891417	229891600	-19064822	+	MER58A	DNA	hAT-Charlie	28	224	0	3
chr1	229905316	229905317	chunk0019_376_1	7.69373	AR_DHT_Control	chr1	229904168	229905656	-19050766	+	L1ME1	LINE	L1	5378	6974	0	3
chr1	229980195	229980196	chunk0019_377_1	90.94715	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	229978052	229980542	-18975880	+	L1MC2	LINE	L1	3644	6079	-265	3
chr1	230015962	230015963	chunk0019_380_1	8.1827	AR_DHT_Control	chr1	230015420	230016078	-18940344	+	Tigger3	DNA	TcMar-Tigger	2339	3023	-6	3
chr1	230228014	230228015	chunk0019_391_1	24.3834	AR_DHT_Control	chr1	230226854	230228530	-18727892	+	L1ME3Cz	LINE	L1	3070	4908	-1238	3
chr1	230410841	230410842	chunk0019_395_1	17.7528	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	230409798	230410930	-18545492	+	L1MEj	LINE	L1	1939	3339	-2875	3
chr1	230634313	230634314	chunk0019_402_1	16.71182	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	230634222	230634409	-18322013	+	MER20	DNA	hAT-Charlie	16	219	0	3
chr1	230656383	230656384	chunk0019_405_1	21.8732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	230653980	230658830	-18297592	-	L1P2	LINE	L1	-852	5609	687	3
chr1	230665980	230665981	chunk0019_408_1	7.69373	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	230665820	230666308	-18290114	+	L2c	LINE	L2	2071	2582	-837	3
chr1	230731212	230731213	chunk0019_415_1	52.1428	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	230730804	230731257	-18225165	+	LTR56	LTR	ERV1	9	437	0	3
chr1	230758280	230758281	chunk0019_418_1	11.6937	AR_DHT_Control	chr1	230758257	230758382	-18198040	+	L2b	LINE	L2	3247	3373	-2	3
chr1	230950576	230950577	chunk0019_432_1	96.54622	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	230950480	230950608	-18005814	+	Charlie17	DNA	hAT-Charlie	810	950	-1966	3
chr1	231049678	231049679	chunk0019_437_1	9.83377	AR_DHT_Control	chr1	231049495	231049968	-17906454	-	Tigger3b	DNA	TcMar-Tigger	0	1231	768	3
chr1	231243223	231243224	chunk0019_441_1	12.1979	AR_DHT_Control	chr1	231243122	231243303	-17713119	-	L2c	LINE	L2	-70	3317	3121	3
chr1	231383312	231383313	chunk0019_455_1	30.66707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	231383086	231383358	-17573064	+	LTR82B	LTR	ERVL	558	829	-1	3
chr1	231487965	231487966	chunk0019_461_1	14.33755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231487840	231488206	-17468216	-	L1MC2	LINE	L1	-54	6290	5815	3
chr1	231513804	231513805	chunk0019_463_1	5.69226	AR_DHT_Control	chr1	231513586	231513978	-17442444	-	L1ME3G	LINE	L1	-315	609	461	3
chr1	231530055	231530056	chunk0019_464_1	4.9436	AR_DHT_Control	chr1	231530052	231530331	-17426091	-	MLT1F1	LTR	ERVL-MaLR	-283	286	1	3
chr1	231577363	231577364	chunk0020_1_1	25.3937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231576553	231577454	-17378968	+	L2a	LINE	L2	2492	3420	-6	3
chr1	231651970	231651971	chunk0020_7_1	155.475	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	231646101	231652225	-17304197	-	L1HS	LINE	L1	-99	6229	174	3
chr1	231684066	231684067	chunk0020_12_1	5.32462	AR_DHT_Control	chr1	231684058	231684124	-17272298	+	L2c	LINE	L2	3254	3318	-69	3
chr1	231684573	231684574	chunk0020_14_1	272.1446	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	231684493	231684654	-17271768	-	L1ME3D	LINE	L1	-58	6184	5972	3
chr1	231707772	231707773	chunk0020_15_1	10.0576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231707756	231708524	-17247898	+	Ricksha_b	DNA	MULE-MuDR	9	786	-469	3
chr1	231721213	231721214	chunk0020_16_1	28.36103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231721097	231721218	-17235204	+	MIRc	SINE	MIR	130	252	-16	3
chr1	231861951	231861952	chunk0020_26_1	9.41864	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231861904	231862019	-17094403	-	MER63B	DNA	hAT-Blackjack	0	436	317	3
chr1	231920245	231920246	chunk0020_27_1	36.1653	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	231920228	231920737	-17035685	-	L1MB3	LINE	L1	0	6183	5686	3
chr1	232004167	232004168	chunk0020_29_1	3.97245	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232004012	232004587	-16951835	+	L1MDa	LINE	L1	3313	3911	-2626	3
chr1	232059990	232059991	chunk0020_32_1	6.53862	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	232059982	232060028	-16896394	+	(TG)n	Simple_repeat	Simple_repeat	1	46	0	3
chr1	232085286	232085287	chunk0020_33_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	232085234	232085452	-16870970	-	MIRb	SINE	MIR	-31	237	7	3
chr1	232164724	232164725	chunk0020_36_1	23.7501	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	232164670	232164862	-16791560	-	MIR	SINE	MIR	-35	227	13	3
chr1	232207558	232207559	chunk0020_38_1	8.13469	AR_DHT_Control	chr1	232205945	232208357	-16748065	-	Tigger5	DNA	TcMar-Tigger	-1	2405	1	3
chr1	232225321	232225322	chunk0020_40_1	15.17949	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	232225249	232226012	-16730410	+	LTR39	LTR	ERV1	1	783	0	3
chr1	232568405	232568406	chunk0020_63_1	23.00801	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	232567642	232568481	-16387941	+	MER21B	LTR	ERVL	1	861	-7	3
chr1	232622941	232622942	chunk0020_66_1	9.89432	AR_DHT_Control	chr1	232622916	232623034	-16333388	-	L2a	LINE	L2	-2	3424	3304	3
chr1	232665268	232665269	chunk0020_69_1	25.534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232665139	232665844	-16290578	+	L1MEg	LINE	L1	1307	2100	-3984	3
chr1	232679567	232679568	chunk0020_73_1	17.11766	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232679480	232679575	-16276847	+	MARNA	DNA	TcMar-Mariner	33	129	-457	3
chr1	232718170	232718171	chunk0020_80_1	6.67113	AR_DHT_Control	chr1	232717768	232718330	-16238092	-	LTR10C	LTR	ERV1	0	591	1	3
chr1	232752390	232752391	chunk0020_82_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232752360	232752475	-16203947	-	MER58B	DNA	hAT-Charlie	-15	326	211	3
chr1	232780558	232780559	chunk0020_87_1	17.0234	AR_DHT_Control	chr1	232780303	232780607	-16175815	+	LTR105_Mam	LTR	ERVL	224	543	-57	3
chr1	232802816	232802817	chunk0020_89_1	15.0847	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232802646	232802883	-16153539	-	MIR	SINE	MIR	-6	256	3	3
chr1	232820601	232820602	chunk0020_93_1	30.28582	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	232820136	232820664	-16135758	+	LTR33	LTR	ERVL	2	515	0	3
chr1	232827918	232827919	chunk0020_95_1	5.73904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	232827506	232828557	-16127865	-	L1PB1	LINE	L1	-660	5491	4448	3
chr1	232919987	232919988	chunk0020_99_1	22.59095	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	232919891	232920079	-16036343	-	L1M5	LINE	L1	-1835	4311	4120	3
chr1	233052634	233052635	chunk0020_108_1	4.86605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	233052632	233052759	-15903663	+	L2a	LINE	L2	3261	3424	-2	3
chr1	233059613	233059614	chunk0020_109_1	24.0758	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	233059519	233059681	-15896741	+	L2c	LINE	L2	3163	3383	-4	3
chr1	233121910	233121911	chunk0020_110_1	13.0353	AR_DHT_Control	chr1	233121631	233122073	-15834349	+	L1MC3	LINE	L1	6401	6851	-934	3
chr1	233222096	233222097	chunk0020_112_1	17.8267	AR_DHT_Control	chr1	233221927	233222413	-15734009	-	L2a	LINE	L2	-39	3387	2856	3
chr1	233312311	233312312	chunk0020_116_1	30.5964	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233312131	233312784	-15643638	+	L1MC4a	LINE	L1	3180	3836	-2310	3
chr1	233348456	233348457	chunk0020_117_1	9.99437	AR_DHT_Control	chr1	233347970	233348715	-15607707	-	L1MB8	LINE	L1	-1	6177	5434	3
chr1	233426083	233426084	chunk0020_121_1	33.7824	AR_DHT_Control	chr1	233425285	233426329	-15530093	-	L1MD1	LINE	L1	-4156	2477	1474	3
chr1	233497977	233497978	chunk0020_125_1	9.89478	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	233497718	233498384	-15458038	-	LTR35B	LTR	ERV1	0	605	1	3
chr1	233520799	233520800	chunk0020_126_1	7.97093	AR_DHT_Control	chr1	233520603	233521196	-15435226	+	MLT2B3	LTR	ERVL	1	554	0	3
chr1	233577523	233577524	chunk0020_127_1	43.9106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	233577256	233578041	-15378381	-	L1MEg2	LINE	L1	-1707	5747	4907	3
chr1	233601383	233601384	chunk0020_129_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233601326	233601425	-15354997	+	L2	LINE	L2	1422	1522	-1897	3
chr1	233602357	233602358	chunk0020_130_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233602276	233602387	-15354035	-	L2a	LINE	L2	0	3426	3312	3
chr1	233623482	233623483	chunk0020_133_1	7.64898	AR_DHT_Control	chr1	233623225	233623579	-15332843	+	L1MA5A	LINE	L1	5936	6297	0	3
chr1	233654771	233654772	chunk0020_135_1	64.11754	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	233653877	233655516	-15300906	+	MLT1A0-int	LTR	ERVL-MaLR	2	1735	0	3
chr1	233714952	233714953	chunk0020_144_1	22.98845	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233714837	233715454	-15240968	-	LTR82B	LTR	ERVL	-6	824	189	3
chr1	233755033	233755034	chunk0020_148_1	22.36956	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	233754496	233755392	-15201030	+	L1ME2z	LINE	L1	3047	3971	-2175	3
chr1	233805969	233805970	chunk0020_150_1	7.67158	AR_DHT_Control	chr1	233804277	233806461	-15149961	+	L1MC2	LINE	L1	4063	6182	-162	3
chr1	233940706	233940707	chunk0020_152_1	21.5849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	233940695	233940972	-15015450	-	L1M5	LINE	L1	-345	5779	5503	3
chr1	233981359	233981360	chunk0020_153_1	5.54895	AR_DHT_Control	chr1	233981023	233981929	-14974493	-	L1MD2	LINE	L1	-15	6344	5404	3
chr1	234047213	234047214	chunk0020_155_1	126.0564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	234046928	234047221	-14909201	-	L1ME3C	LINE	L1	-1373	4773	4477	3
chr1	234403586	234403587	chunk0020_166_1	88.14665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	234403287	234403618	-14552804	+	L2a	LINE	L2	3054	3388	-38	3
chr1	234437951	234437952	chunk0020_168_1	17.5792	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	234437554	234439543	-14516879	+	L1MEf	LINE	L1	44	2082	-4160	3
chr1	234452667	234452668	chunk0020_169_1	88.71902	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	234452270	234453322	-14503100	+	L1MC2	LINE	L1	5188	6282	-62	3
chr1	234532746	234532747	chunk0020_176_1	6.05004	AR_DHT_Control	chr1	234532658	234532793	-14423629	-	MIRc	SINE	MIR	0	268	123	3
chr1	234563670	234563671	chunk0020_178_1	12.7422	AR_DHT_Control	chr1	234563582	234564091	-14392331	-	L1ME4a	LINE	L1	-39	6085	5538	3
chr1	234610943	234610944	chunk0020_180_1	5.68236	AR_DHT_Control	chr1	234610919	234610971	-14345451	+	G-rich	Low_complexity	Low_complexity	1	52	0	3
chr1	234689325	234689326	chunk0020_183_1	8.46929	AR_DHT_Control	chr1	234689213	234689603	-14266819	-	MLT1A1	LTR	ERVL-MaLR	0	457	1	3
chr1	234831411	234831412	chunk0020_187_1	14.4596	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	234831400	234831658	-14124764	+	AluJr	SINE	Alu	1	278	-34	3
chr1	234862027	234862028	chunk0020_188_1	33.6479	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	234861430	234862046	-14094376	+	L1ME4b	LINE	L1	5	671	-221	3
chr1	234961924	234961925	chunk0020_201_1	53.0524	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	234961909	234961953	-13994469	+	(GCACAGT)n	Simple_repeat	Simple_repeat	1	44	0	3
chr1	235078426	235078427	chunk0020_207_1	13.51352	Merged_Lncap_AR_Veh;AR_DHT_Control	chr1	235078153	235078768	-13877654	+	(TG)n	Simple_repeat	Simple_repeat	1	645	0	3
chr1	235129939	235129940	chunk0020_210_1	7.73888	AR_DHT_Control	chr1	235129780	235130071	-13826351	+	MER41C	LTR	ERV1	1	269	-252	3
chr1	235320767	235320768	chunk0020_219_1	93.57224	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	235320372	235321124	-13635298	+	L2a	LINE	L2	2592	3426	0	3
chr1	235714341	235714342	chunk0020_232_1	29.0995	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	235714296	235714435	-13241987	+	L3	LINE	CR1	3709	3848	-251	3
chr1	235769238	235769239	chunk0020_233_1	6.9447	AR_DHT_Control	chr1	235768948	235769357	-13187065	-	L2b	LINE	L2	0	3375	2949	3
chr1	235785454	235785455	chunk0020_235_1	7.97093	AR_DHT_Control	chr1	235785102	235785478	-13170944	+	L2a	LINE	L2	3039	3426	0	3
chr1	235802636	235802637	chunk0020_236_1	8.62865	AR_DHT_Control	chr1	235802470	235802705	-13153717	+	L2b	LINE	L2	3058	3321	-54	3
chr1	235826269	235826270	chunk0020_240_1	34.1689	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	235826013	235826682	-13129740	+	L1ME2	LINE	L1	5370	6085	-79	3
chr1	236097337	236097338	chunk0020_248_1	88.7408	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr1	236097247	236097348	-12859074	-	LTR10A	LTR	ERV1	-357	252	106	3
chr1	236097337	236097338	chunk0020_248_1	88.7408	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr1	236097334	236097570	-12858852	-	LTR10A	LTR	ERV1	-357	252	1	3
chr1	236123679	236123680	chunk0020_251_1	5.0883	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	236123615	236123701	-12832721	+	MIR	SINE	MIR	170	247	-15	3
chr1	236149876	236149877	chunk0020_255_1	6.32352	AR_DHT_Control	chr1	236149834	236150344	-12806078	+	(GTGTGT)n	Simple_repeat	Simple_repeat	1	511	0	3
chr1	236292683	236292684	chunk0020_258_1	55.56482	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	236292536	236292766	-12663656	-	L1MC1	LINE	L1	0	6333	6099	3
chr1	236350837	236350838	chunk0020_270_1	13.8104	AR_DHT_Control	chr1	236350706	236350997	-12605425	+	LTR23	LTR	ERV1	1	299	-138	3
chr1	236541227	236541228	chunk0020_281_1	8.1827	AR_DHT_Control	chr1	236541011	236541361	-12415061	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr1	236611910	236611911	chunk0020_282_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	236611887	236612900	-12343522	+	L1MEc	LINE	L1	416	1486	-4914	3
chr1	236673631	236673632	chunk0020_283_1	6.84874	AR_DHT_Control	chr1	236673532	236673771	-12282651	+	MIRb	SINE	MIR	1	268	0	3
chr1	237029546	237029547	chunk0020_287_1	3.55697	AR_DHT_Control	chr1	237029334	237029551	-11926871	+	Plat_L3	LINE	CR1	2234	2466	-1120	3
chr1	237070660	237070661	chunk0020_290_1	4.36616	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	237070489	237071223	-11885199	-	MER52A	LTR	ERV1	0	1755	892	3
chr1	237190781	237190782	chunk0020_295_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	237190522	237190827	-11765595	+	MER2	DNA	TcMar-Tigger	17	344	-1	3
chr1	237235151	237235152	chunk0020_298_1	118.8024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	237235016	237235211	-11721211	-	MamRep1527	LTR	LTR	-3	966	763	3
chr1	237283442	237283443	chunk0020_300_1	14.3513	AR_DHT_Control	chr1	237283405	237283540	-11672882	+	L2b	LINE	L2	3254	3377	-10	3
chr1	237449211	237449212	chunk0020_304_1	167.7074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	237449163	237449772	-11506650	-	L1MEc	LINE	L1	-4165	2235	1635	3
chr1	237471018	237471019	chunk0020_307_1	11.8254	AR_DHT_Control	chr1	237470691	237471420	-11485002	-	LTR9A1	LTR	ERV1	0	728	1	3
chr1	237584943	237584944	chunk0020_310_1	61.9545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	237584894	237585000	-11371422	+	SVA_E	Retroposon	SVA	187	290	-1092	3
chr1	237584943	237584944	chunk0020_310_1	61.9545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	237584907	237585035	-11371387	-	FLAM_C	SINE	Alu	-10	133	1	3
chr1	237648695	237648696	chunk0020_313_1	81.53281	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	237648693	237648914	-11307508	-	L2c	LINE	L2	0	3387	3157	3
chr1	237679979	237679980	chunk0020_318_1	5.66005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	237679933	237680091	-11276331	+	MIRb	SINE	MIR	11	181	-87	3
chr1	237756766	237756767	chunk0020_322_1	16.24852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	237756669	237756839	-11199583	-	MER58B	DNA	hAT-Charlie	-2	339	165	3
chr1	237779699	237779700	chunk0020_324_1	5.66005	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	237779652	237779706	-11176716	-	MER67A	LTR	ERV1	0	543	490	3
chr1	237897167	237897168	chunk0020_327_1	53.2447	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	237896891	237897391	-11059031	-	MLT1C	LTR	ERVL-MaLR	0	467	3	3
chr1	238162649	238162650	chunk0020_329_1	33.41198	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	238158238	238165649	-10790773	-	L1MA2	LINE	L1	-4	7719	13	3
chr1	238415277	238415278	chunk0020_331_1	7.08133	AR_DHT_Control	chr1	238415257	238415416	-10541006	-	L2a	LINE	L2	-32	3394	3222	3
chr1	238524320	238524321	chunk0020_332_1	17.6381	AR_DHT_Control	chr1	238523983	238524366	-10432056	-	L2	LINE	L2	-967	2452	2037	3
chr1	239057119	239057120	chunk0020_339_1	30.9766	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	239057042	239057415	-9899007	+	MER83C	LTR	ERV1	1	373	0	3
chr1	239084818	239084819	chunk0020_342_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	239079239	239085375	-9871047	-	L1PB1	LINE	L1	-3	6864	575	3
chr1	239227094	239227095	chunk0020_346_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	239225325	239227537	-9728885	-	L1M2	LINE	L1	-4604	2962	727	3
chr1	239434489	239434490	chunk0020_351_1	14.40985	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr1	239434294	239434643	-9521779	+	L2c	LINE	L2	3032	3379	-8	3
chr1	239456376	239456377	chunk0020_354_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	239456253	239456604	-9499818	+	Tigger3c	DNA	TcMar-Tigger	244	602	0	3
chr1	239635379	239635380	chunk0020_361_1	78.13865	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	239635068	239635419	-9321003	+	L2a	LINE	L2	2616	2970	-449	3
chr1	239696331	239696332	chunk0020_363_1	14.5159	AR_DHT_Control	chr1	239696324	239696356	-9260066	+	MIRc	SINE	MIR	218	249	-19	3
chr1	239761109	239761110	chunk0020_369_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	239760590	239762174	-9194248	-	L1MEc	LINE	L1	-873	1807	35	3
chr1	239859256	239859257	chunk0020_375_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	239858591	239859393	-9097029	-	L1MB5	LINE	L1	-9	6165	5370	3
chr1	240085806	240085807	chunk0020_384_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	240085753	240085901	-8870521	-	L2a	LINE	L2	-19	3356	3222	3
chr1	240253920	240253921	chunk0020_387_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	240253268	240255357	-8701065	-	L1MA4A	LINE	L1	-4772	2077	3	3
chr1	240459334	240459335	chunk0020_390_1	11.4584	AR_DHT_Control	chr1	240459246	240459437	-8496985	+	L4_C_Mam	LINE	RTE-X	4305	4503	-635	3
chr1	240527766	240527767	chunk0020_394_1	9.83377	AR_DHT_Control	chr1	240527653	240527858	-8428564	-	MIRc	SINE	MIR	-14	254	16	3
chr1	240736590	240736591	chunk0020_399_1	23.1271	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	240736557	240736623	-8219799	+	MLT1N2	LTR	ERVL-MaLR	492	559	-3	3
chr1	241306544	241306545	chunk0020_407_1	7.66459	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	241306128	241306853	-7649569	+	(CA)n	Simple_repeat	Simple_repeat	1	728	0	3
chr1	241457483	241457484	chunk0020_411_1	4.15945	AR_DHT_Control	chr1	241457254	241457829	-7498593	-	MER67C	LTR	ERV1	-96	615	13	3
chr1	241579589	241579590	chunk0020_417_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	241579107	241580260	-7376162	-	L1PB3	LINE	L1	-5637	1279	114	3
chr1	241610311	241610312	chunk0020_422_1	105.8226	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	241610250	241610513	-7345909	-	L2c	LINE	L2	-82	3305	3025	3
chr1	241689099	241689100	chunk0020_429_1	69.49187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	241688511	241689611	-7266811	+	L1MCa	LINE	L1	11	872	-5636	3
chr1	241718184	241718185	chunk0020_431_1	6.57411	AR_DHT_Control	chr1	241718138	241718388	-7238034	-	L2c	LINE	L2	0	3387	3108	3
chr1	241797929	241797930	chunk0020_433_1	33.8718	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	241797803	241798084	-7158338	-	Tigger19a	DNA	TcMar-Tigger	-50	273	2	3
chr1	241818766	241818767	chunk0020_434_1	7.52656	AR_DHT_Control	chr1	241818647	241818848	-7137574	+	MIRb	SINE	MIR	2	217	-51	3
chr1	241840418	241840419	chunk0020_435_1	5.69781	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	241840307	241840676	-7115746	-	MLT1B	LTR	ERVL-MaLR	0	390	52	3
chr1	242007725	242007726	chunk0020_439_1	29.3407	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	242007258	242008566	-6947856	-	ERVL-B4-int	LTR	ERVL	-1320	4394	2937	3
chr1	242108352	242108353	chunk0020_442_1	8.51012	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	242108341	242108570	-6847852	+	L2	LINE	L2	334	584	-2835	3
chr1	242147427	242147428	chunk0020_443_1	172.2434	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr1	242147016	242149664	-6806758	-	L1ME1	LINE	L1	-17	6957	4235	3
chr1	242462047	242462048	chunk0021_238_1	28.3422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	242461573	242462155	-6494267	-	L1PA16	LINE	L1	-494	5672	5070	3
chr1	242855017	242855018	chunk0021_242_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	242849171	242855668	-6100754	-	L1PB1	LINE	L1	-1	6866	260	3
chr1	242945451	242945452	chunk0021_243_1	42.0409	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	242945443	242945514	-6010908	-	MLT2B1	LTR	ERVL	-485	71	1	3
chr1	243363176	243363177	chunk0021_251_1	10.9477	AR_DHT_Control	chr1	243362655	243363177	-5593245	-	L3	LINE	CR1	-420	3679	3098	3
chr1	243411648	243411649	chunk0021_255_1	116.8301	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	243411416	243411877	-5544545	-	L1ME1	LINE	L1	-2	6177	5706	3
chr1	243542342	243542343	chunk0021_261_1	14.6324	AR_DHT_Control	chr1	243542284	243542399	-5414023	-	MIRc	SINE	MIR	-158	110	3	3
chr1	243991880	243991881	chunk0021_273_1	12.0416	AR_DHT_Control	chr1	243991831	243992102	-4964320	+	L4_C_Mam	LINE	RTE-X	4178	4466	-672	3
chr1	244286437	244286438	chunk0021_278_1	34.65013	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	244286437	244286794	-4669628	+	MLT1A0	LTR	ERVL-MaLR	15	364	-1	3
chr1	244327466	244327467	chunk0021_281_1	93.6773	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	244327214	244329046	-4627376	-	L1ME1	LINE	L1	0	6179	2890	3
chr1	244369788	244369789	chunk0021_284_1	22.7654	AR_DHT_Control	chr1	244369439	244370155	-4586267	-	LTR9A1	LTR	ERV1	0	728	1	3
chr1	244545710	244545711	chunk0021_290_1	5.9324	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	244544099	244546064	-4410358	+	ERVL-B4-int	LTR	ERVL	1744	3742	-1972	3
chr1	244662838	244662839	chunk0021_292_1	279.4412	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	244662595	244662845	-4293577	-	L2a	LINE	L2	-141	3285	3028	3
chr1	244694783	244694784	chunk0021_294_1	68.55841	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	244694751	244694914	-4261508	+	MER58B	DNA	hAT-Charlie	176	340	-1	3
chr1	244703391	244703392	chunk0021_297_1	13.1721	AR_DHT_Control	chr1	244703349	244703650	-4252772	-	AluJb	SINE	Alu	-6	306	1	3
chr1	244719889	244719890	chunk0021_300_1	64.4131	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	244719461	244719965	-4236457	-	L1MC2	LINE	L1	-649	5695	5205	3
chr1	244792363	244792364	chunk0021_303_1	29.5234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	244792280	244792501	-4163921	+	Tigger13a	DNA	TcMar-Tigger	432	659	-112	3
chr1	244860305	244860306	chunk0021_307_1	14.3817	AR_DHT_Control	chr1	244860018	244860316	-4096106	+	AluSx	SINE	Alu	1	300	-12	3
chr1	244925312	244925313	chunk0021_308_1	4.59852	AR_DHT_Control	chr1	244924762	244925367	-4031055	-	HAL1	LINE	L1	-475	2032	1426	3
chr1	245062988	245062989	chunk0021_314_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	245062646	245063542	-3892880	-	ERV3-16A3_I-int	LTR	ERVL	-3579	1647	740	3
chr1	245179898	245179899	chunk0021_315_1	11.946	AR_DHT_Control	chr1	245179644	245179989	-3776433	-	L2b	LINE	L2	-85	3290	2933	3
chr1	245243246	245243247	chunk0021_317_1	15.9878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	245242949	245243429	-3712993	-	L1ME3Cz	LINE	L1	-475	522	13	3
chr1	245277137	245277138	chunk0021_320_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	245276875	245277255	-3679167	+	MLT1C	LTR	ERVL-MaLR	80	455	-12	3
chr1	245768722	245768723	chunk0021_333_1	155.3445	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	245768563	245768959	-3187463	+	MLT1A1	LTR	ERVL-MaLR	1	405	-3	3
chr1	245999859	245999860	chunk0021_340_1	105.05096	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	245999815	245999880	-2956542	+	MIRc	SINE	MIR	17	82	-186	3
chr1	246038055	246038056	chunk0021_344_1	68.3018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	246037882	246038102	-2918320	-	MER58A	DNA	hAT-Charlie	0	224	3	3
chr1	246171601	246171602	chunk0021_350_1	66.5096	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246171457	246171728	-2784694	-	Tigger3c	DNA	TcMar-Tigger	-1	601	327	3
chr1	246262424	246262425	chunk0021_355_1	5.00965	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246262368	246262513	-2693909	-	MIR	SINE	MIR	-4	258	112	3
chr1	246281597	246281598	chunk0021_356_1	33.53065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246281529	246281648	-2674774	+	L2c	LINE	L2	3272	3373	-14	3
chr1	246315609	246315610	chunk0021_360_1	40.62902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246315476	246315654	-2640768	-	L3	LINE	CR1	-6	4093	3895	3
chr1	246336707	246336708	chunk0021_362_1	42.00325	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246336613	246336743	-2619679	-	MIRb	SINE	MIR	-9	259	119	3
chr1	246374275	246374276	chunk0021_368_1	64.61036	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	246374241	246374689	-2581733	+	Tigger17a	DNA	TcMar-Tigger	1	469	-185	3
chr1	246404907	246404908	chunk0021_374_1	45.4378	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	246404902	246404960	-2551462	-	L1MA5	LINE	L1	0	6300	6257	3
chr1	246449714	246449715	chunk0021_377_1	173.8921	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246449576	246449764	-2506658	+	MIRb	SINE	MIR	53	252	-16	3
chr1	246469054	246469055	chunk0021_378_1	7.37742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	246468964	246469156	-2487266	-	LTR81A	LTR	Gypsy	-487	863	673	3
chr1	246470931	246470932	chunk0021_379_1	5.44099	AR_DHT_Control	chr1	246470761	246471160	-2485262	+	L1MC4	LINE	L1	7688	8040	-2	3
chr1	246488898	246488899	chunk0021_380_1	23.03514	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	246488868	246488987	-2467435	-	MER5A	DNA	hAT-Charlie	-9	180	50	3
chr1	246537996	246537997	chunk0021_386_1	23.40844	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	246537668	246538336	-2418086	+	LTR9A1	LTR	ERV1	1	728	0	3
chr1	246597448	246597449	chunk0021_391_1	10.788	AR_DHT_Control	chr1	246597242	246597455	-2358967	-	L1MB7	LINE	L1	-26	6158	5932	3
chr1	246661986	246661987	chunk0021_402_1	3.62043	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246661973	246662178	-2294244	+	MIRc	SINE	MIR	44	251	-17	3
chr1	246689710	246689711	chunk0021_405_1	5.24411	AR_DHT_Control	chr1	246689571	246689829	-2266593	+	LTR41	LTR	ERVL	24	280	-488	3
chr1	246710164	246710165	chunk0021_406_1	6.48643	AR_DHT_Control	chr1	246710027	246710263	-2246159	-	MER67A	LTR	ERV1	0	543	288	3
chr1	246775541	246775542	chunk0021_410_1	79.45942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	246775428	246775772	-2180650	-	L1ME3B	LINE	L1	-1954	4192	3825	3
chr1	246845905	246845906	chunk0021_414_1	14.42046	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	246845894	246845962	-2110460	-	MER63B	DNA	hAT-Blackjack	-371	65	3	3
chr1	246938909	246938910	chunk0021_419_1	117.49014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	246938536	246938950	-2017472	-	Tigger3c	DNA	TcMar-Tigger	0	602	159	3
chr1	247035172	247035173	chunk0021_422_1	5.69781	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	247035069	247035195	-1921227	-	HERVL74-int	LTR	ERVL	-3189	140	2	3
chr1	247097889	247097890	chunk0021_424_1	6.54035	AR_DHT_Control	chr1	247097846	247097913	-1858509	+	L1M4	LINE	L1	4000	4071	-2075	3
chr1	247514787	247514788	chunk0021_428_1	36.8848	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	247514283	247515122	-1441300	-	L1PB	LINE	L1	-785	5361	4491	3
chr1	247633007	247633008	chunk0021_431_1	15.3744	AR_DHT_Control	chr1	247630176	247635344	-1321078	-	L1P2	LINE	L1	-477	5992	780	3
chr1	247680465	247680466	chunk0021_434_1	5.28385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr1	247680129	247680523	-1275899	-	MER57C1	LTR	ERV1	0	385	1	3
chr1	248205316	248205317	chunk0021_439_1	9.01771	AR_DHT_Control	chr1	248204246	248210286	-746136	-	L1PB1	LINE	L1	-1	6866	833	3
chr1	248229471	248229472	chunk0021_440_1	8.52761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	248224957	248230029	-726393	-	L1PA15	LINE	L1	-1505	5261	213	3
chr1	248418514	248418515	chunk0021_445_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr1	248418049	248418822	-537600	+	LTR1D1	LTR	ERV1	1	899	0	3
chr1	248680966	248680967	chunk0021_447_1	33.2138	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr1	248680960	248681005	-275417	+	(TG)n	Simple_repeat	Simple_repeat	1	45	0	3
chr10	128691	128692	chunk0021_1_1	3.56234	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	128670	128706	-133668716	+	(TATT)n	Simple_repeat	Simple_repeat	1	36	0	3
chr10	264220	264221	chunk0021_6_1	10.4378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	264119	264297	-133533125	-	LTR56	LTR	ERV1	-111	334	153	3
chr10	336558	336559	chunk0021_10_1	22.4995	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	336532	336845	-133460577	+	Tigger3b	DNA	TcMar-Tigger	206	535	-696	3
chr10	547021	547022	chunk0021_24_1	18.05815	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	546302	547141	-133250281	-	Charlie1	DNA	hAT-Charlie	-150	2631	1669	3
chr10	700598	700599	chunk0021_29_1	4.67092	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	700154	700711	-133096711	+	(GTGT)n	Simple_repeat	Simple_repeat	1	569	0	3
chr10	848431	848432	chunk0021_33_1	5.40763	AR_DHT_Control	chr10	848195	848770	-132948652	+	L1MC1	LINE	L1	613	1242	-5158	3
chr10	849399	849400	chunk0021_34_1	25.0561	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	849216	850182	-132947240	+	L1MC3	LINE	L1	6701	7771	-14	3
chr10	853241	853242	chunk0021_35_1	7.24519	AR_DHT_Control	chr10	853195	853401	-132944021	-	Tigger1	DNA	TcMar-Tigger	0	2418	2216	3
chr10	856037	856038	chunk0021_37_1	30.6824	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	855833	856120	-132941302	+	L1MC1	LINE	L1	4924	5217	-1099	3
chr10	917554	917555	chunk0021_44_1	74.6732	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	916995	918037	-132879385	+	LTR49-int	LTR	ERV1	4603	5667	-664	3
chr10	970391	970392	chunk0021_48_1	8.68049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	970195	970457	-132826965	+	L3	LINE	CR1	3819	4098	-1	3
chr10	1004119	1004120	chunk0021_49_1	7.08133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	1002496	1005131	-132792291	-	L1M2a	LINE	L1	-4178	2990	193	3
chr10	1058071	1058072	chunk0021_53_1	27.99379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	1057998	1058164	-132739258	-	L3	LINE	CR1	-423	3676	3507	3
chr10	1278424	1278425	chunk0021_62_1	23.8404	AR_DHT_Control	chr10	1278293	1278607	-132518815	-	L1PA16	LINE	L1	0	6166	5814	3
chr10	1324965	1324966	chunk0021_67_1	198.7947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	1323261	1325048	-132472374	+	L1MD2	LINE	L1	4428	6349	-10	3
chr10	1375792	1375793	chunk0021_69_1	6.46845	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	1375735	1376104	-132421318	+	(CA)n	Simple_repeat	Simple_repeat	1	380	0	3
chr10	1727056	1727057	chunk0021_83_1	65.42041	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	1726989	1727064	-132070358	+	L2b	LINE	L2	3294	3370	-5	3
chr10	2348721	2348722	chunk0021_89_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	2348267	2348759	-131448663	+	L1ME3B	LINE	L1	5493	5999	-243	3
chr10	2672533	2672534	chunk0021_94_1	6.75904	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	2672274	2672733	-131124689	-	MLT1H	LTR	ERVL-MaLR	-46	503	66	3
chr10	3052045	3052046	chunk0021_103_1	51.2466	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	3051753	3052150	-130745272	-	MER51B	LTR	ERV1	0	377	2	3
chr10	3648800	3648801	chunk0021_120_1	8.24351	Merged_Lncap_AR_Veh	chr10	3648607	3648896	-130148526	+	(CA)n	Simple_repeat	Simple_repeat	1	294	0	3
chr10	4141551	4141552	chunk0021_143_1	7.83042	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	4141338	4141776	-129655646	-	L1MCc	LINE	L1	-5172	1251	784	3
chr10	4280609	4280610	chunk0021_148_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	4280173	4280629	-129516793	-	MER39B	LTR	ERV1	-191	462	1	3
chr10	4751602	4751603	chunk0021_156_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	4750107	4751884	-129045538	+	L1MEf	LINE	L1	595	2392	-3754	3
chr10	5043765	5043766	chunk0021_160_1	9.13774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	5038562	5046687	-128750735	-	HERVK13-int	LTR	ERVK	0	8116	1	3
chr10	5045183	5045184	chunk0021_161_1	6.8205	AR_DHT_Control	chr10	5038562	5046687	-128750735	-	HERVK13-int	LTR	ERVK	0	8116	1	3
chr10	5071914	5071915	chunk0021_162_1	5.6425	AR_DHT_Control	chr10	5071504	5072037	-128725385	+	MER67A	LTR	ERV1	1	542	-1	3
chr10	5268417	5268418	chunk0021_167_1	19.53525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	5268242	5268567	-128528855	-	Tigger3a	DNA	TcMar-Tigger	-1	347	4	3
chr10	5360617	5360618	chunk0021_170_1	9.87716	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	5360345	5360933	-128436489	-	MER34A1	LTR	ERV1	-3	584	1	3
chr10	5492306	5492307	chunk0021_176_1	30.9697	AR_DHT_Control	chr10	5492110	5492343	-128305079	+	L1ME4a	LINE	L1	5782	6009	-115	3
chr10	5779117	5779118	chunk0021_197_1	14.50394	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	5778878	5779229	-128018193	+	L1M4a1	LINE	L1	593	1210	-1369	3
chr10	5780610	5780611	chunk0021_198_1	14.35285	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	5780249	5781345	-128016077	+	L1ME2	LINE	L1	3963	5085	-1061	3
chr10	5789850	5789851	chunk0021_200_1	97.9197	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	5789594	5790361	-128007061	+	Tigger2b_Pri	DNA	TcMar-Tigger	99	904	-164	3
chr10	6287575	6287576	chunk0021_224_1	32.6317	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	6287388	6287674	-127509748	+	Tigger3a	DNA	TcMar-Tigger	69	347	-1	3
chr10	6362009	6362010	chunk0021_230_1	70.2033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	6361984	6362078	-127435344	-	MER134	DNA?	DNA?	-322	191	95	3
chr10	6938809	6938810	chunk0021_234_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	6938740	6938891	-126858531	+	MER63B	DNA	hAT-Blackjack	283	431	-5	3
chr10	7082655	7082656	chunk0022_1_1	12.6024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	7082565	7082769	-126714653	-	MER134	DNA?	DNA?	-309	204	11	3
chr10	7354852	7354853	chunk0022_12_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	7354681	7355056	-126442366	-	Zaphod	DNA	hAT-Tip100	-37	3994	3596	3
chr10	7684143	7684144	chunk0022_21_1	25.83185	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	7683379	7685103	-126112319	+	L1PA16	LINE	L1	4395	6165	-1	3
chr10	7760547	7760548	chunk0022_23_1	38.8646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	7760540	7760854	-126036568	+	MER44A	DNA	TcMar-Tigger	1	339	0	3
chr10	7773995	7773996	chunk0022_24_1	7.36432	AR_DHT_Control	chr10	7773973	7774194	-126023228	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr10	7817226	7817227	chunk0022_25_1	28.7592	AR_DHT_Control	chr10	7817137	7817252	-125980170	-	L2	LINE	L2	-1291	2128	2015	3
chr10	7951135	7951136	chunk0022_32_1	34.62027	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	7950665	7951188	-125846234	+	Tigger17a	DNA	TcMar-Tigger	95	645	-9	3
chr10	7973693	7973694	chunk0022_34_1	43.6166	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	7973577	7973716	-125823706	+	MIRb	SINE	MIR	127	268	0	3
chr10	8007357	8007358	chunk0022_38_1	29.2878	AR_DHT_Control	chr10	8007144	8007426	-125789996	+	L1ME3Cz	LINE	L1	495	742	-255	3
chr10	8795530	8795531	chunk0022_72_1	4.77556	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	8795500	8795571	-125001851	+	MLT1H1	LTR	ERVL-MaLR	476	553	-2	3
chr10	8812119	8812120	chunk0022_74_1	23.34424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	8811744	8813040	-124984382	+	L1ME1	LINE	L1	3794	5109	-1210	3
chr10	8821275	8821276	chunk0022_75_1	19.40592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	8821142	8821309	-124976113	-	MIRb	SINE	MIR	-85	183	10	3
chr10	8837972	8837973	chunk0022_77_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	8837928	8838190	-124959232	-	L3	LINE	CR1	-2775	1324	1067	3
chr10	8851232	8851233	chunk0022_78_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	8851036	8851509	-124945913	+	L1MA7	LINE	L1	5818	6324	-10	3
chr10	8951821	8951822	chunk0022_82_1	19.4491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	8951763	8952010	-124845412	-	MIRb	SINE	MIR	0	268	10	3
chr10	9542693	9542694	chunk0022_92_1	12.1886	AR_DHT_Control	chr10	9541564	9543127	-124254295	-	MER65-int	LTR	ERV1	-2577	4021	2376	3
chr10	9605402	9605403	chunk0022_95_1	17.59584	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	9605305	9605617	-124191805	+	MLT1I	LTR	ERVL-MaLR	99	393	-18	3
chr10	9606775	9606776	chunk0022_97_1	36.7533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	9606646	9606893	-124190529	-	L1MC	LINE	L1	-2310	5572	5318	3
chr10	9987410	9987411	chunk0022_101_1	57.81784	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	9987391	9987732	-123809690	-	L2a	LINE	L2	-868	2551	2182	3
chr10	10015160	10015161	chunk0022_102_1	4.43081	AR_DHT_Control	chr10	10015088	10015331	-123782091	+	L1MB2	LINE	L1	5500	5748	-436	3
chr10	10049823	10049824	chunk0022_103_1	20.94404	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	10049817	10050141	-123747281	+	AluJr	SINE	Alu	1	302	-10	3
chr10	10101800	10101801	chunk0022_106_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	10101261	10103900	-123693522	-	LTR53-int	LTR	ERVL	-325	3004	315	3
chr10	10114707	10114708	chunk0022_108_1	7.36432	AR_DHT_Control	chr10	10114080	10115835	-123681587	-	L1PA16	LINE	L1	-9	6157	4400	3
chr10	10115022	10115023	chunk0022_109_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	10114080	10115835	-123681587	-	L1PA16	LINE	L1	-9	6157	4400	3
chr10	10741136	10741137	chunk0022_113_1	15.1861	AR_DHT_Control	chr10	10740387	10741206	-123056216	+	L1MA9	LINE	L1	5474	6274	-38	3
chr10	11228295	11228296	chunk0022_116_1	29.43509	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	11228255	11228350	-122569072	-	MIR	SINE	MIR	-2	260	159	3
chr10	11512725	11512726	chunk0022_118_1	3.72052	AR_DHT_Control	chr10	11512575	11512807	-122284615	+	L2c	LINE	L2	2911	3166	-221	3
chr10	11556473	11556474	chunk0022_125_1	4.44156	AR_DHT_Control	chr10	11555498	11556828	-122240594	+	L1MEg	LINE	L1	1270	2725	-3594	3
chr10	11656120	11656121	chunk0022_128_1	9.70003	AR_DHT_Control	chr10	11656110	11656156	-122141266	+	MLT1D	LTR	ERVL-MaLR	366	412	-93	3
chr10	11698415	11698416	chunk0022_130_1	7.80475	AR_DHT_Control	chr10	11697957	11698581	-122098841	+	L2a	LINE	L2	2721	3422	-4	3
chr10	11776216	11776217	chunk0022_132_1	9.96971	AR_DHT_Control	chr10	11776144	11776514	-122020908	+	MER20B	DNA	hAT-Charlie	32	427	-356	3
chr10	11825933	11825934	chunk0022_134_1	6.99331	AR_DHT_Control	chr10	11825866	11826576	-121970846	-	L1MB5	LINE	L1	0	6180	5470	3
chr10	11842403	11842404	chunk0022_137_1	6.7814	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	11842234	11842521	-121954901	-	L1MEd	LINE	L1	-4921	2182	1875	3
chr10	12377199	12377200	chunk0022_148_1	6.04605	AR_DHT_Control	chr10	12377179	12377211	-121420211	+	(AAACA)n	Simple_repeat	Simple_repeat	1	33	0	3
chr10	12586753	12586754	chunk0022_160_1	24.8599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	12586732	12586773	-121210649	+	A-rich	Low_complexity	Low_complexity	1	41	0	3
chr10	12620346	12620347	chunk0022_164_1	6.3364	AR_DHT_Control	chr10	12620216	12621543	-121175879	-	L1MD1	LINE	L1	-1	6098	4765	3
chr10	12631948	12631949	chunk0022_165_1	22.2836	AR_DHT_Control	chr10	12631875	12631978	-121165444	+	L2c	LINE	L2	3274	3385	-2	3
chr10	12678454	12678455	chunk0022_166_1	32.3771	AR_DHT_Control	chr10	12678114	12678757	-121118665	-	L1M3	LINE	L1	-3102	3038	2362	3
chr10	12720644	12720645	chunk0022_171_1	73.38436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	12720094	12720888	-121076534	-	MamGypsy2-I	LTR	Gypsy	-206	3960	3082	3
chr10	13185132	13185133	chunk0022_181_1	7.09019	AR_DHT_Control	chr10	13185087	13185339	-120612083	-	MER70B	LTR	ERVL	-212	366	114	3
chr10	13206218	13206219	chunk0022_182_1	7.47918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	13206173	13206293	-120591129	-	L1M5	LINE	L1	-292	5902	5768	3
chr10	13426860	13426861	chunk0022_189_1	11.3974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	13425802	13427809	-120369613	+	L1PB3	LINE	L1	4125	6153	-1	3
chr10	13428703	13428704	chunk0022_190_1	20.2712	AR_DHT_Control	chr10	13428467	13428797	-120368625	+	L1MA7	LINE	L1	5579	5908	-383	3
chr10	13508740	13508741	chunk0022_198_1	78.843	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	13508703	13508827	-120288595	-	L2c	LINE	L2	0	3387	3268	3
chr10	13556954	13556955	chunk0022_199_1	3.9241	AR_DHT_Control	chr10	13556915	13557151	-120240271	-	HAL1	LINE	L1	-2295	212	1	3
chr10	13570140	13570141	chunk0022_200_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	13569485	13570286	-120227136	+	L1PB3	LINE	L1	4675	5491	-663	3
chr10	13587508	13587509	chunk0022_201_1	12.831	AR_DHT_Control	chr10	13587325	13587915	-120209507	+	MER51C	LTR	ERV1	1	639	-1	3
chr10	13903270	13903271	chunk0022_215_1	8.24382	AR_DHT_Control	chr10	13903010	13903446	-119893976	+	L2a	LINE	L2	2945	3416	-10	3
chr10	14025406	14025407	chunk0022_226_1	7.47918	AR_DHT_Control	chr10	14025328	14025417	-119772005	-	L1MB2	LINE	L1	-7	6164	6076	3
chr10	14042067	14042068	chunk0022_228_1	57.0498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	14042001	14042592	-119754830	+	LTR10C	LTR	ERV1	1	591	0	3
chr10	14413680	14413681	chunk0022_243_1	5.6503	AR_DHT_Control	chr10	14413626	14414056	-119383366	+	L1MA9	LINE	L1	5703	6161	-130	3
chr10	14449763	14449764	chunk0022_244_1	5.14476	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	14449107	14449928	-119347494	+	(CA)n	Simple_repeat	Simple_repeat	1	832	0	3
chr10	14623188	14623189	chunk0022_253_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	14622697	14623417	-119174005	-	Tigger13a	DNA	TcMar-Tigger	-44	727	1	3
chr10	14860101	14860102	chunk0022_261_1	25.0882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	14859880	14860233	-118937189	-	L1MC	LINE	L1	-1497	4649	4229	3
chr10	15084548	15084549	chunk0022_270_1	9.63129	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15084416	15085010	-118712412	-	MER51A	LTR	ERV1	0	634	1	3
chr10	15097330	15097331	chunk0022_271_1	4.5547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15097301	15097350	-118700072	+	(GCGAG)n	Simple_repeat	Simple_repeat	1	51	0	3
chr10	15232413	15232414	chunk0022_279_1	35.13399	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15232170	15232526	-118564896	+	L2a	LINE	L2	3017	3425	-1	3
chr10	15444348	15444349	chunk0022_286_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15444204	15444396	-118353026	+	MIR	SINE	MIR	40	234	-28	3
chr10	15509767	15509768	chunk0022_292_1	4.83532	AR_DHT_Control	chr10	15509617	15510079	-118287343	+	MLT1C	LTR	ERVL-MaLR	1	466	-1	3
chr10	15656829	15656830	chunk0022_303_1	9.25776	AR_DHT_Control	chr10	15656662	15656846	-118140576	-	L3	LINE	CR1	-710	3389	3201	3
chr10	15797605	15797606	chunk0022_308_1	33.58194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	15797504	15797652	-117999770	-	L1ME4b	LINE	L1	-379	513	363	3
chr10	15852105	15852106	chunk0022_311_1	28.4154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	15850990	15852273	-117945149	+	L2c	LINE	L2	1975	3377	-10	3
chr10	16166702	16166703	chunk0022_317_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	16165423	16167378	-117630044	-	HERVL-int	LTR	ERVL	0	5654	3709	3
chr10	16250778	16250779	chunk0022_318_1	10.4518	AR_DHT_Control	chr10	16249997	16250977	-117546445	+	LTR5B	LTR	ERVK	12	1002	0	3
chr10	16300826	16300827	chunk0022_319_1	69.2581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	16299909	16301027	-117496395	-	Tigger3b	DNA	TcMar-Tigger	0	1231	79	3
chr10	16310380	16310381	chunk0022_322_1	93.3674	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	16309960	16310383	-117487039	-	L2a	LINE	L2	0	3426	2992	3
chr10	16471767	16471768	chunk0022_325_1	10.9345	AR_DHT_Control	chr10	16471402	16471973	-117325449	-	L1ME4a	LINE	L1	-4	6120	5532	3
chr10	16559168	16559169	chunk0022_330_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	16554152	16559883	-117237539	-	L1PA15	LINE	L1	-360	6507	4	3
chr10	16711981	16711982	chunk0022_337_1	50.23593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	16711060	16714059	-117083363	-	L1MA6	LINE	L1	-2640	4922	2087	3
chr10	16803319	16803320	chunk0022_341_1	7.12934	AR_DHT_Control	chr10	16801988	16805000	-116992422	+	L1MC2	LINE	L1	3480	6589	-173	3
chr10	16893720	16893721	chunk0022_343_1	6.84874	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	16893451	16893918	-116903504	-	L1MD1	LINE	L1	-158	6084	5627	3
chr10	16897137	16897138	chunk0022_344_1	15.1785	AR_DHT_Control	chr10	16895383	16897909	-116899513	-	L1MDb	LINE	L1	-3493	3044	404	3
chr10	16957382	16957383	chunk0022_345_1	12.7163	AR_DHT_Control	chr10	16956879	16957443	-116839979	-	L1MA6	LINE	L1	0	6300	5751	3
chr10	17284776	17284777	chunk0022_362_1	30.1678	AR_DHT_Control	chr10	17284608	17284808	-116512614	+	MER103C	DNA	hAT-Charlie	31	232	-65	3
chr10	17388266	17388267	chunk0022_365_1	14.63495	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	17388024	17388470	-116408952	-	LTR80A	LTR	ERVL	-99	484	21	3
chr10	17465946	17465947	chunk0022_370_1	53.53893	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	17465925	17466048	-116331374	+	MIRc	SINE	MIR	15	160	-108	3
chr10	17545915	17545916	chunk0022_375_1	7.38582	AR_DHT_Control	chr10	17545659	17546023	-116251399	+	L1MB1	LINE	L1	5821	6141	-42	3
chr10	17574913	17574914	chunk0022_376_1	28.702	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	17574849	17574940	-116222482	+	L1ME4b	LINE	L1	24	118	-774	3
chr10	17585022	17585023	chunk0022_378_1	9.21264	AR_DHT_Control	chr10	17584990	17585409	-116212013	+	MER57A1	LTR	ERV1	11	432	0	3
chr10	17590643	17590644	chunk0022_379_1	13.2288	AR_DHT_Control	chr10	17590561	17590659	-116206763	-	MER115	DNA	hAT-Tip100	-8	685	600	3
chr10	17602640	17602641	chunk0022_380_1	7.52431	AR_DHT_Control	chr10	17602538	17602794	-116194628	-	L1MA8	LINE	L1	-5	6286	6015	3
chr10	17606741	17606742	chunk0022_383_1	18.42556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	17606504	17606803	-116190619	+	Charlie7	DNA	hAT-Charlie	323	639	-1973	3
chr10	17625120	17625121	chunk0022_385_1	133.1923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	17624908	17625231	-116172191	-	L1ME1	LINE	L1	-2	6350	6033	3
chr10	17668941	17668942	chunk0022_389_1	117.6678	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	17668331	17669047	-116128375	-	L1MC2	LINE	L1	-55	6289	5565	3
chr10	17682698	17682699	chunk0022_390_1	4.5547	AR_DHT_Control	chr10	17682450	17683024	-116114398	-	L1ME1	LINE	L1	-3191	3128	2525	3
chr10	17794549	17794550	chunk0022_392_1	7.09019	AR_DHT_Control	chr10	17794532	17794565	-116002857	+	(AC)n	Simple_repeat	Simple_repeat	1	33	0	3
chr10	18022371	18022372	chunk0022_398_1	24.1208	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	18021321	18024666	-115772756	-	L1PA15	LINE	L1	-3703	4438	836	3
chr10	18350409	18350410	chunk0022_408_1	10.1791	AR_DHT_Control	chr10	18350281	18350466	-115446956	-	MIRc	SINE	MIR	-72	196	3	3
chr10	18640642	18640643	chunk0022_418_1	6.13293	AR_DHT_Control	chr10	18640565	18640768	-115156654	+	L1ME2	LINE	L1	5943	6162	-2	3
chr10	18795750	18795751	chunk0022_420_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	18795238	18796151	-115001271	+	L1PA16	LINE	L1	38	1817	-5118	3
chr10	19111582	19111583	chunk0022_421_1	10.1791	AR_DHT_Control	chr10	19111339	19111801	-114685621	-	L2	LINE	L2	-2513	906	398	4
chr10	19184169	19184170	chunk0022_425_1	7.22694	AR_DHT_Control	chr10	19184004	19184384	-114613038	-	LTR86A1	LTR	ERVL	-129	384	4	4
chr10	19296847	19296848	chunk0022_428_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	19296723	19297104	-114500318	+	L4_A_Mam	LINE	RTE-X	4537	4913	-77	4
chr10	19561913	19561914	chunk0022_437_1	12.1886	AR_DHT_Control	chr10	19561645	19562016	-114235406	-	L1MC2	LINE	L1	-5818	690	374	4
chr10	19614116	19614117	chunk0022_439_1	103.14063	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	19614095	19614302	-114183120	-	MIR	SINE	MIR	-9	253	7	4
chr10	19626373	19626374	chunk0022_441_1	8.35541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	19626261	19627284	-114170138	+	L1M5	LINE	L1	4046	5079	-1067	4
chr10	19627084	19627085	chunk0022_442_1	5.16131	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	19626261	19627284	-114170138	+	L1M5	LINE	L1	4046	5079	-1067	4
chr10	19675682	19675683	chunk0022_443_1	6.43609	AR_DHT_Control	chr10	19675626	19675705	-114121717	+	MIRc	SINE	MIR	180	251	-17	4
chr10	19750121	19750122	chunk0022_444_1	5.90945	AR_DHT_Control	chr10	19749477	19750269	-114047153	+	MER54B	LTR	ERVL	1	793	0	4
chr10	19785693	19785694	chunk0022_446_1	30.13482	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	19784610	19786608	-114010814	+	L1PREC2	LINE	L1	4168	6159	-1	4
chr10	19904405	19904406	chunk0022_451_1	6.49378	AR_DHT_Control	chr10	19904349	19904783	-113892639	-	L1PBa	LINE	L1	-6663	200	1	4
chr10	19956728	19956729	chunk0022_454_1	108.1682	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	19956659	19956742	-113840680	+	L2a	LINE	L2	3304	3383	-43	4
chr10	20105349	20105350	chunk0022_459_1	16.30613	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	20105297	20105386	-113692036	+	Tigger16a	DNA	TcMar-Tigger	824	912	-45	4
chr10	20206141	20206142	chunk0022_462_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	20205951	20206162	-113591260	+	L1MA7	LINE	L1	6064	6279	-12	4
chr10	20648783	20648784	chunk0023_5_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	20648467	20648982	-113148440	-	MER51E	LTR	ERV1	0	482	1	4
chr10	20950249	20950250	chunk0023_17_1	7.48058	AR_DHT_Control	chr10	20950002	20950267	-112847155	+	L2a	LINE	L2	3152	3424	-2	4
chr10	21011196	21011197	chunk0023_22_1	6.40219	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	21011106	21011260	-112786162	-	MIR3	SINE	MIR	-6	202	14	4
chr10	21088125	21088126	chunk0023_25_1	97.38217	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	21087988	21088220	-112709202	-	MLT1I	LTR	ERVL-MaLR	0	411	166	4
chr10	21194583	21194584	chunk0023_36_1	12.4503	AR_DHT_Control	chr10	21194271	21194632	-112602790	+	Zaphod2	DNA	hAT-Tip100	3143	3524	0	4
chr10	21254953	21254954	chunk0023_43_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	21254611	21255215	-112542207	-	Charlie17b	DNA	hAT-Charlie	-577	627	18	4
chr10	21329127	21329128	chunk0023_45_1	7.36432	AR_DHT_Control	chr10	21328994	21329403	-112468019	-	L1MB3	LINE	L1	-356	5827	5436	4
chr10	21635160	21635161	chunk0023_49_1	10.98485	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	21635021	21635377	-112162045	-	HAL1M8	LINE	L1	-2502	489	74	4
chr10	21659043	21659044	chunk0023_50_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	21658968	21659217	-112138205	-	L1MD	LINE	L1	-754	5392	5127	4
chr10	21755452	21755453	chunk0023_54_1	16.72875	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	21755442	21755561	-112041861	+	Tigger4b	DNA	TcMar-Tigger	229	348	-13	4
chr10	21823670	21823671	chunk0023_55_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	21823637	21823863	-111973559	-	MER30	DNA	hAT-Charlie	0	230	2	4
chr10	21871164	21871165	chunk0023_56_1	5.6425	AR_DHT_Control	chr10	21870803	21871660	-111925762	+	L1ME2	LINE	L1	168	1062	-6455	4
chr10	21934509	21934510	chunk0023_58_1	41.2976	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	21933681	21934833	-111862589	+	Tigger3b	DNA	TcMar-Tigger	2	1230	-1	4
chr10	21965679	21965680	chunk0023_60_1	56.3318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	21965424	21965940	-111831482	+	MER41C	LTR	ERV1	1	521	0	4
chr10	22059463	22059464	chunk0023_64_1	7.62275	AR_DHT_Control	chr10	22059214	22059468	-111737954	-	L1ME1	LINE	L1	-15	6164	5889	4
chr10	22132170	22132171	chunk0023_70_1	11.1147	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	22132161	22132303	-111665119	-	L1ME4c	LINE	L1	-573	257	138	4
chr10	22173777	22173778	chunk0023_73_1	61.4022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	22173328	22173787	-111623635	-	HAL1b	LINE	L1	-1007	1414	959	4
chr10	22183285	22183286	chunk0023_75_1	53.4102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	22183139	22183296	-111614126	-	L1M5	LINE	L1	-1860	4286	4100	4
chr10	22278419	22278420	chunk0023_81_1	14.0237	AR_DHT_Control	chr10	22278132	22278435	-111518987	+	AluY	SINE	Alu	1	302	-9	4
chr10	22285337	22285338	chunk0023_82_1	11.8254	AR_DHT_Control	chr10	22285244	22285453	-111511969	+	MER130	DNA	DNA	1021	1234	-360	4
chr10	22289016	22289017	chunk0023_83_1	31.97954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	22288520	22289148	-111508274	-	L1MB5	LINE	L1	-8	6166	5550	4
chr10	22467013	22467014	chunk0023_90_1	226.78311	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	22466879	22467036	-111330386	+	L2b	LINE	L2	3203	3358	-17	4
chr10	22495970	22495971	chunk0023_91_1	6.48772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	22495617	22496149	-111301273	-	L1ME1	LINE	L1	-1	6178	5677	4
chr10	22683447	22683448	chunk0023_98_1	7.51936	AR_DHT_Control	chr10	22683377	22683582	-111113840	+	MIRc	SINE	MIR	23	233	-35	4
chr10	22781538	22781539	chunk0023_100_1	7.36432	AR_DHT_Control	chr10	22781475	22781632	-111015790	-	L2b	LINE	L2	-11	3415	3255	4
chr10	22981015	22981016	chunk0023_108_1	135.1604	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	22980927	22981038	-110816384	+	L3	LINE	CR1	3582	3697	-402	4
chr10	23057815	23057816	chunk0023_112_1	10.8017	AR_DHT_Control	chr10	23057758	23057967	-110739455	-	MER34A	LTR	ERV1	-324	247	2	4
chr10	23304605	23304606	chunk0023_116_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	23303758	23305354	-110492068	+	L1M3a	LINE	L1	9	1088	-4867	4
chr10	23326537	23326538	chunk0023_117_1	12.37654	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	23325379	23326784	-110470638	+	L1MEf	LINE	L1	409	1879	-4321	4
chr10	23481793	23481794	chunk0023_121_1	35.063	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	23481431	23482213	-110315209	+	Tigger5	DNA	TcMar-Tigger	1019	1805	-601	4
chr10	23557048	23557049	chunk0023_122_1	5.08049	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	23557012	23557166	-110240256	-	LTR88c	LTR	Gypsy?	-677	185	2	4
chr10	23795899	23795900	chunk0023_125_1	9.57048	AR_DHT_Control	chr10	23795331	23796076	-110001346	-	LTR39	LTR	ERV1	0	783	1	4
chr10	23848864	23848865	chunk0023_131_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	23848809	23848896	-109948526	+	MLT1I	LTR	ERVL-MaLR	320	411	0	4
chr10	23989984	23989985	chunk0023_137_1	22.2389	AR_DHT_Control	chr10	23989835	23990019	-109807403	+	MIRb	SINE	MIR	68	265	-3	4
chr10	24012993	24012994	chunk0023_140_1	22.97733	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	24012928	24013566	-109783856	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	4
chr10	24048031	24048032	chunk0023_144_1	11.0973	AR_DHT_Control	chr10	24047975	24048181	-109749241	-	MamSINE1	SINE	tRNA-RTE	-40	250	40	4
chr10	24251840	24251841	chunk0023_153_1	11.02048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	24251721	24251994	-109545428	+	MIRb	SINE	MIR	4	259	-9	4
chr10	24349483	24349484	chunk0023_165_1	9.77812	AR_DHT_Control	chr10	24349403	24349521	-109447901	-	MIRb	SINE	MIR	-15	253	121	4
chr10	24358788	24358789	chunk0023_166_1	3.9241	AR_DHT_Control	chr10	24358776	24358919	-109438503	+	MARNA	DNA	TcMar-Mariner	440	560	-26	4
chr10	24397979	24397980	chunk0023_167_1	7.36432	AR_DHT_Control	chr10	24397857	24398004	-109399418	+	MIRb	SINE	MIR	16	176	-92	4
chr10	24408759	24408760	chunk0023_168_1	39.96956	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	24408319	24409029	-109388393	+	L2a	LINE	L2	2627	3426	0	4
chr10	24643230	24643231	chunk0023_182_1	8.27376	AR_DHT_Control	chr10	24643145	24643251	-109154171	-	L2a	LINE	L2	-2	3424	3285	4
chr10	24795257	24795258	chunk0023_187_1	14.55638	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	24795044	24795402	-109002020	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	4
chr10	25018549	25018550	chunk0023_189_1	9.61425	AR_DHT_Control	chr10	25018370	25018597	-108778825	-	MER58A	DNA	hAT-Charlie	0	224	10	4
chr10	25100359	25100360	chunk0023_191_1	27.8461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	25100185	25100758	-108696664	-	MER97b	DNA	hAT-Tip100	-456	593	1	4
chr10	25119464	25119465	chunk0023_193_1	16.44842	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	25119417	25119511	-108677911	-	L1ME4a	LINE	L1	-538	5586	5494	4
chr10	25135279	25135280	chunk0023_194_1	7.06178	AR_DHT_Control	chr10	25134955	25136113	-108661309	-	L1MB3	LINE	L1	-51	6132	4969	4
chr10	25162529	25162530	chunk0023_196_1	71.03	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	25161962	25162567	-108634855	+	L2a	LINE	L2	2650	3378	-48	4
chr10	25256775	25256776	chunk0023_202_1	17.18803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	25256768	25257004	-108540418	+	L3b	LINE	CR1	3190	3410	-689	4
chr10	25280753	25280754	chunk0023_203_1	7.36432	AR_DHT_Control	chr10	25280741	25280853	-108516569	+	L1MEd	LINE	L1	2761	2821	-3325	4
chr10	25319287	25319288	chunk0023_204_1	18.7748	AR_DHT_Control	chr10	25319099	25319454	-108477968	+	L2c	LINE	L2	3019	3366	-9	4
chr10	25358949	25358950	chunk0023_208_1	12.0416	AR_DHT_Control	chr10	25358734	25359188	-108438234	-	L1M4	LINE	L1	-3270	2876	2416	4
chr10	25367816	25367817	chunk0023_209_1	7.36432	AR_DHT_Control	chr10	25367655	25367882	-108429540	-	L1ME3	LINE	L1	-3623	2523	2289	4
chr10	25397121	25397122	chunk0023_210_1	7.56068	AR_DHT_Control	chr10	25397094	25397205	-108400217	-	MLT1E1A	LTR	ERVL-MaLR	-497	156	45	4
chr10	25659586	25659587	chunk0023_217_1	5.64367	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	25658640	25659930	-108137492	-	L1MA2	LINE	L1	-2807	4758	3415	4
chr10	25665897	25665898	chunk0023_219_1	20.43272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	25665617	25666627	-108130795	-	L1ME1	LINE	L1	-5292	1108	50	4
chr10	26462167	26462168	chunk0023_220_1	11.1716	AR_DHT_Control	chr10	26462138	26462213	-107335209	+	MER58C	DNA	hAT-Charlie	140	215	0	4
chr10	26796493	26796494	chunk0023_230_1	12.7844	AR_DHT_Control	chr10	26796270	26796622	-107000800	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	4
chr10	26810668	26810669	chunk0023_232_1	46.70681	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	26810502	26810728	-106986694	-	MER58A	DNA	hAT-Charlie	0	224	1	4
chr10	26819135	26819136	chunk0023_235_1	87.1881	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	26819010	26819180	-106978242	+	L1ME1	LINE	L1	2001	2156	-4244	4
chr10	26925762	26925763	chunk0023_236_1	40.8258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	26924684	26926266	-106871156	+	L1MC2	LINE	L1	4240	5825	-519	4
chr10	26976590	26976591	chunk0023_237_1	18.6213	AR_DHT_Control	chr10	26976514	26976598	-106820824	+	LTR40a	LTR	ERVL	72	168	-351	4
chr10	26988126	26988127	chunk0023_239_1	64.64061	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	26987430	26988764	-106808658	-	PRIMA4-int	LTR	ERV1	-3485	4785	3441	4
chr10	27003484	27003485	chunk0023_241_1	5.55081	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	27003367	27004312	-106793110	+	L1MC4	LINE	L1	7133	8038	-4	4
chr10	27485495	27485496	chunk0023_252_1	45.0381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	27485432	27485583	-106311839	-	L1ME3A	LINE	L1	-16	6157	6000	4
chr10	27547531	27547532	chunk0023_259_1	19.40829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	27547351	27547863	-106249559	-	L2a	LINE	L2	-1	3425	2843	4
chr10	27646775	27646776	chunk0023_260_1	4.83532	AR_DHT_Control	chr10	27646629	27646870	-106150552	-	MIR	SINE	MIR	-18	244	1	4
chr10	27678059	27678060	chunk0023_262_1	43.9195	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	27678040	27678108	-106119314	-	MIR	SINE	MIR	-13	249	180	4
chr10	27888416	27888417	chunk0023_269_1	9.1218	AR_DHT_Control	chr10	27888066	27888702	-105908720	-	L1M2	LINE	L1	-406	5750	5112	4
chr10	28263403	28263404	chunk0023_275_1	11.872	AR_DHT_Control	chr10	28263333	28263434	-105533988	-	MamRep488	DNA	hAT-Tip100	-80	139	29	4
chr10	28410673	28410674	chunk0023_282_1	22.7	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	28410421	28410757	-105386665	+	L2c	LINE	L2	3030	3356	-19	4
chr10	28463907	28463908	chunk0023_284_1	12.9588	AR_DHT_Control	chr10	28463861	28464330	-105333092	+	ERVL-B4-int	LTR	ERVL	4082	4648	-1066	4
chr10	28529660	28529661	chunk0023_285_1	6.8205	AR_DHT_Control	chr10	28529577	28530506	-105266916	-	L2a	LINE	L2	-458	2961	1932	4
chr10	28774161	28774162	chunk0023_296_1	30.5396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	28773982	28774768	-105022654	+	HAL1ME	LINE	L1	3	882	-1583	4
chr10	28895041	28895042	chunk0023_307_1	22.18005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	28894932	28895354	-104902068	-	MLT1J2	LTR	ERVL-MaLR	0	448	22	4
chr10	28900643	28900644	chunk0023_308_1	8.22827	AR_DHT_Control	chr10	28900508	28900838	-104896584	+	MLT2B4	LTR	ERVL	1	355	-165	4
chr10	29012618	29012619	chunk0023_309_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	29012534	29012624	-104784798	-	L1MD2	LINE	L1	-1	6358	6267	4
chr10	29044065	29044066	chunk0023_312_1	10.3174	AR_DHT_Control	chr10	29043902	29044102	-104753320	-	AluJb	SINE	Alu	-24	288	86	4
chr10	29056832	29056833	chunk0023_314_1	8.15319	AR_DHT_Control	chr10	29056789	29056908	-104740514	-	MER94	DNA	hAT-Blackjack	0	134	5	4
chr10	29107848	29107849	chunk0023_318_1	51.9858	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	29107818	29107863	-104689559	+	(TTTCT)n	Simple_repeat	Simple_repeat	1	45	0	4
chr10	29365124	29365125	chunk0023_334_1	30.8544	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	29365080	29365234	-104432188	+	Tigger3c	DNA	TcMar-Tigger	362	498	-104	4
chr10	29384966	29384967	chunk0023_336_1	4.9245	AR_DHT_Control	chr10	29384669	29385099	-104412323	-	MER83	LTR	ERV1	0	448	3	4
chr10	29534778	29534779	chunk0023_341_1	15.17966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	29534638	29534840	-104262582	+	MIRb	SINE	MIR	26	250	-18	4
chr10	29687105	29687106	chunk0023_349_1	19.20974	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	29686963	29687409	-104110013	+	LTR34	LTR	ERV1	14	488	-211	4
chr10	29713532	29713533	chunk0023_351_1	6.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	29713519	29713740	-104083682	-	MER58A	DNA	hAT-Charlie	-1	223	1	4
chr10	29731205	29731206	chunk0023_352_1	8.44714	AR_DHT_Control	chr10	29731167	29731307	-104066115	+	L2c	LINE	L2	3241	3382	-5	4
chr10	29791809	29791810	chunk0023_353_1	12.57703	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	29791665	29791819	-104005603	+	MER5A	DNA	hAT-Charlie	3	189	0	4
chr10	29998167	29998168	chunk0023_362_1	14.69389	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	29998006	29998439	-103798983	+	(AC)n	Simple_repeat	Simple_repeat	1	460	0	4
chr10	30231188	30231189	chunk0023_373_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	30230803	30231435	-103565987	+	LTR36	LTR	ERV1	1	611	0	4
chr10	30242541	30242542	chunk0023_374_1	28.8622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	30242469	30242734	-103554688	+	L1M5	LINE	L1	4386	4659	-1487	4
chr10	30414239	30414240	chunk0023_378_1	7.36432	AR_DHT_Control	chr10	30414058	30414258	-103383164	-	MamGypLTR3a	LTR	Gypsy	-159	822	639	4
chr10	30437396	30437397	chunk0023_379_1	5.60066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	30437330	30437549	-103359873	-	MIR	SINE	MIR	-26	236	31	4
chr10	30897121	30897122	chunk0023_394_1	23.53252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	30896856	30897246	-102900176	+	Tigger8	DNA	TcMar-Tigger	283	666	-1	4
chr10	30921570	30921571	chunk0023_396_1	53.6143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	30921330	30921722	-102875700	-	L1M7	LINE	L1	-810	1611	1150	4
chr10	31202726	31202727	chunk0023_412_1	22.9004	AR_DHT_Control	chr10	31202514	31202858	-102594564	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	4
chr10	31233514	31233515	chunk0023_413_1	8.64577	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	31232608	31237348	-102560074	+	L1MA5	LINE	L1	401	5826	-1736	4
chr10	31301939	31301940	chunk0023_418_1	25.6719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	31301025	31302341	-102495081	-	L1MA8	LINE	L1	-2	6289	4911	4
chr10	31401486	31401487	chunk0023_419_1	11.967	AR_DHT_Control	chr10	31401140	31401701	-102395721	-	Tigger9b	DNA	TcMar-Tigger	-56	568	2	4
chr10	31508403	31508404	chunk0023_420_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	31505105	31509564	-102287858	-	L1MA4A	LINE	L1	-2314	5248	720	4
chr10	31510133	31510134	chunk0023_421_1	8.1827	AR_DHT_Control	chr10	31510019	31510173	-102287249	-	MLT1J1	LTR	ERVL-MaLR	-251	193	53	4
chr10	31574748	31574749	chunk0023_422_1	93.8878	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	31574428	31575293	-102222129	+	Tigger17c	DNA	TcMar-Tigger	93	990	-198	4
chr10	31596550	31596551	chunk0023_424_1	7.14391	AR_DHT_Control	chr10	31595646	31596944	-102200478	+	ERV3-16A3_I-int	LTR	ERVL	585	2120	-3637	4
chr10	31669784	31669785	chunk0023_427_1	25.48803	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	31669676	31670107	-102127315	-	LTR16A	LTR	ERVL	0	451	1	4
chr10	31864506	31864507	chunk0023_435_1	20.86034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	31864073	31864507	-101932915	+	L1M5	LINE	L1	4107	4592	-1554	4
chr10	31865421	31865422	chunk0023_436_1	35.077	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	31865169	31865593	-101931829	-	L2	LINE	L2	-557	2862	2355	4
chr10	31937185	31937186	chunk0023_438_1	13.12271	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	31936951	31937356	-101860066	+	MER101-int	LTR	ERV1	2810	3219	-3420	4
chr10	31961503	31961504	chunk0023_442_1	26.2225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	31961081	31962010	-101835412	-	MER50-int	LTR	ERV1	-6251	954	1	4
chr10	32106092	32106093	chunk0023_452_1	6.84874	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	32106019	32106196	-101691226	-	MIRc	SINE	MIR	-14	254	63	4
chr10	32171439	32171440	chunk0023_453_1	22.3311	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	32171284	32171542	-101625880	+	LTR82B	LTR	ERVL	432	705	-125	4
chr10	32213498	32213499	chunk0023_455_1	50.0491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	32213488	32213535	-101583887	-	MER91A	DNA	hAT-Tip100	-1	195	148	4
chr10	32313452	32313453	chunk0023_457_1	34.8395	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	32313309	32313608	-101483814	-	L2a	LINE	L2	-19	3407	3053	4
chr10	32332432	32332433	chunk0023_458_1	13.16419	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	32332363	32332572	-101464850	+	MLT1F	LTR	ERVL-MaLR	1	241	-307	4
chr10	32477671	32477672	chunk0023_463_1	18.29135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	32477500	32479159	-101318263	-	L1MC2	LINE	L1	-1149	4997	3289	4
chr10	32552451	32552452	chunk0024_2_1	37.708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	32548645	32554725	-101242697	-	L1PB1	LINE	L1	-230	6637	369	4
chr10	32665655	32665656	chunk0024_4_1	45.1154	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	32664202	32666115	-101131307	-	L1MA8	LINE	L1	-1	7311	5248	4
chr10	32670943	32670944	chunk0024_6_1	6.48643	AR_DHT_Control	chr10	32670729	32670952	-101126470	-	L1MA8	LINE	L1	-2929	4232	4025	4
chr10	32686934	32686935	chunk0024_7_1	4.88663	AR_DHT_Control	chr10	32686254	32687970	-101109452	-	MER76-int	LTR	ERVL	-3207	2982	1240	4
chr10	32693606	32693607	chunk0024_8_1	209.2673	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	32693599	32694478	-101102944	+	MER6	DNA	TcMar-Tigger	1	865	0	4
chr10	32851536	32851537	chunk0024_10_1	14.7289	AR_DHT_Control	chr10	32851059	32851735	-100945687	-	L1M3	LINE	L1	-2970	3170	2448	4
chr10	32862707	32862708	chunk0024_11_1	35.58731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	32862565	32863336	-100934086	+	L1M2a	LINE	L1	5028	5844	-1317	4
chr10	33216679	33216680	chunk0024_30_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	33216449	33216741	-100580681	-	AluJo	SINE	Alu	-10	302	1	4
chr10	33472280	33472281	chunk0024_39_1	14.5882	AR_DHT_Control	chr10	33471801	33472340	-100325082	-	L1MA2	LINE	L1	0	6304	5737	4
chr10	33540602	33540603	chunk0024_40_1	6.6468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	33539552	33540822	-100256600	+	L1MEf	LINE	L1	2246	3584	-2562	4
chr10	33602557	33602558	chunk0024_41_1	23.78786	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	33601465	33602837	-100194585	+	L1MA10	LINE	L1	3453	4837	-2722	4
chr10	33756321	33756322	chunk0024_52_1	19.35196	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	33756070	33756887	-100040535	+	L2a	LINE	L2	2253	3079	-340	4
chr10	34100903	34100904	chunk0024_64_1	51.799	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	34100877	34100996	-99696426	-	AluJb	SINE	Alu	-191	121	1	4
chr10	34319741	34319742	chunk0024_77_1	5.82105	AR_DHT_Control	chr10	34319650	34319776	-99477646	-	MamRTE1	LINE	RTE-BovB	-1018	2794	2665	4
chr10	34469687	34469688	chunk0024_91_1	117.2435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	34469660	34469855	-99327567	+	L1ME4b	LINE	L1	696	890	-2	4
chr10	34532949	34532950	chunk0024_98_1	11.1388	AR_DHT_Control	chr10	34532847	34533180	-99264242	-	Tigger3a	DNA	TcMar-Tigger	0	348	3	4
chr10	34584387	34584388	chunk0024_102_1	7.44578	AR_DHT_Control	chr10	34584316	34584464	-99212958	+	MIRc	SINE	MIR	7	154	-114	4
chr10	34626243	34626244	chunk0024_104_1	333.2139	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	34626053	34626350	-99171072	-	MamRep137	DNA	TcMar-Tigger	-169	341	57	4
chr10	34633516	34633517	chunk0024_105_1	58.5013	AR_DHT_Control	chr10	34633071	34633925	-99163497	-	L1MA7	LINE	L1	-39	6252	5410	4
chr10	34699065	34699066	chunk0024_110_1	22.11844	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	34698811	34699078	-99098344	+	L2	LINE	L2	1811	2125	-1294	4
chr10	34729059	34729060	chunk0024_115_1	4.51651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	34728851	34729188	-99068234	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	4
chr10	34773672	34773673	chunk0024_116_1	7.27655	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	34773347	34773818	-99023604	-	L1ME4c	LINE	L1	-462	368	30	4
chr10	34999309	34999310	chunk0024_131_1	11.2514	AR_DHT_Control	chr10	34999278	34999582	-98797840	+	ERVL-B4-int	LTR	ERVL	422	726	-4988	4
chr10	35004980	35004981	chunk0024_133_1	49.4183	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35004838	35005078	-98792344	+	L2b	LINE	L2	2372	2633	-786	4
chr10	35056168	35056169	chunk0024_137_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	35055892	35056240	-98741182	+	L2a	LINE	L2	3057	3426	0	4
chr10	35130685	35130686	chunk0024_140_1	79.81744	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35130505	35130879	-98666543	+	Tigger3c	DNA	TcMar-Tigger	7	601	-1	4
chr10	35149399	35149400	chunk0024_142_1	5.20246	AR_DHT_Control	chr10	35148992	35149422	-98648000	-	L2c	LINE	L2	0	3387	2911	4
chr10	35237839	35237840	chunk0024_147_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35237539	35237931	-98559491	-	LTR49-int	LTR	ERV1	-7115	1092	721	4
chr10	35250552	35250553	chunk0024_148_1	5.16131	AR_DHT_Control	chr10	35250433	35250615	-98546807	+	MER5A	DNA	hAT-Charlie	7	189	0	4
chr10	35440225	35440226	chunk0024_155_1	6.80366	AR_DHT_Control	chr10	35438611	35440349	-98357073	-	L1MDa	LINE	L1	-4409	2224	146	4
chr10	35470326	35470327	chunk0024_157_1	7.62275	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35469562	35470366	-98327056	+	(GACA)n	Simple_repeat	Simple_repeat	1	818	0	4
chr10	35492509	35492510	chunk0024_159_1	18.73786	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35492369	35492518	-98304904	+	MER104	DNA	TcMar-Tc2	5	160	-21	4
chr10	35591318	35591319	chunk0024_163_1	7.27655	AR_DHT_Control	chr10	35591247	35592330	-98205092	+	L1MEc	LINE	L1	34	1353	-1399	4
chr10	35719318	35719319	chunk0024_171_1	36.11495	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	35719135	35719552	-98077870	+	L2	LINE	L2	1881	2335	-1084	4
chr10	35766178	35766179	chunk0024_175_1	10.0392	AR_DHT_Control	chr10	35765923	35766451	-98030971	-	L1ME3Cz	LINE	L1	-333	664	129	4
chr10	35979281	35979282	chunk0024_181_1	33.83319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	35978684	35981303	-97816119	-	L1ME1	LINE	L1	-693	5486	2764	4
chr10	36097925	36097926	chunk0024_184_1	6.13992	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36097779	36098203	-97699219	-	L1ME3Cz	LINE	L1	-536	461	77	4
chr10	36166113	36166114	chunk0024_190_1	23.14574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	36165990	36166305	-97631117	+	Kanga1a	DNA	TcMar-Tc2	1	330	-424	4
chr10	36178255	36178256	chunk0024_193_1	48.17127	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36178146	36178414	-97619008	-	L2c	LINE	L2	-5	3382	3054	4
chr10	36254432	36254433	chunk0024_196_1	22.50674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36254303	36254499	-97542923	-	MIR	SINE	MIR	-25	243	19	4
chr10	36321745	36321746	chunk0024_197_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36321209	36322545	-97474877	+	L1PA15	LINE	L1	4784	6158	-7	4
chr10	36408555	36408556	chunk0024_201_1	14.2911	AR_DHT_Control	chr10	36408431	36408698	-97388724	+	Tigger3c	DNA	TcMar-Tigger	323	602	0	4
chr10	36740318	36740319	chunk0024_206_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36740098	36740384	-97057038	-	Tigger3b	DNA	TcMar-Tigger	-935	296	4	4
chr10	36755356	36755357	chunk0024_208_1	27.50272	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	36755202	36756188	-97041234	+	L1MC3	LINE	L1	6896	7949	-11	4
chr10	36811906	36811907	chunk0024_211_1	5.6425	AR_DHT_Control	chr10	36811738	36811911	-96985511	+	L2b	LINE	L2	3198	3418	-8	4
chr10	36918163	36918164	chunk0024_213_1	12.58697	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	36918063	36918197	-96879225	-	MER5A1	DNA	hAT-Charlie	-29	137	2	4
chr10	37841597	37841598	chunk0024_221_1	100.7281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	37841449	37842206	-95955216	+	L1MC3	LINE	L1	6945	7776	-9	4
chr10	37860935	37860936	chunk0024_223_1	21.74917	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	37860864	37861250	-95936172	+	MER57C2	LTR	ERV1	1	434	0	4
chr10	38029061	38029062	chunk0024_227_1	13.9963	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	38028766	38029442	-95767980	-	L1MB7	LINE	L1	-5042	2578	1889	4
chr10	38579003	38579004	chunk0024_242_1	55.8241	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr10	38573338	38582821	-95214601	+	(AATGG)n	Simple_repeat	Simple_repeat	1	9498	0	4
chr10	38590318	38590319	chunk0024_244_1	7.36432	AR_DHT_Control	chr10	38589585	38592054	-95205368	+	(AATGG)n	Simple_repeat	Simple_repeat	5	2520	0	4
chr10	38835805	38835806	chunk0024_245_1	14.6153	Merged_Lncap_AR_Veh	chr10	38832075	38889294	-94908128	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	57968	0	4
chr10	38878867	38878868	chunk0024_246_1	34.80247	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	38832075	38889294	-94908128	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	57968	0	4
chr10	38902444	38902445	chunk0024_249_1	38.6562	Merged_Lncap_AR_Veh	chr10	38895851	38905991	-94891431	+	(GAATGGAATG)n	Simple_repeat	Simple_repeat	1	10270	0	4
chr10	38912586	38912587	chunk0024_254_1	43.39064	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	38911580	38913438	-94883984	+	(GAGTG)n	Simple_repeat	Simple_repeat	1	1866	0	4
chr10	38918677	38918678	chunk0024_255_1	8.0483	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	38918658	38918713	-94878709	+	AluSz6	SINE	Alu	225	280	-32	4
chr10	38919182	38919183	chunk0024_257_1	34.70696	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr10	38918720	38919342	-94878080	+	(GAATG)n	Satellite	Satellite	4	625	0	4
chr10	38919909	38919910	chunk0024_260_1	36.49164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr10	38919408	38919967	-94877455	+	(GAATG)n	Satellite	Satellite	4	561	0	4
chr10	41858423	41858424	chunk0024_267_1	11.6789	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
chr10	41859518	41859519	chunk0024_268_1	9.51856	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
chr10	41860071	41860072	chunk0024_271_1	29.80409	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
chr10	41875457	41875458	chunk0024_273_1	53.93303	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
chr10	41882047	41882048	chunk0024_276_1	47.93866	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
chr10	41884019	41884020	chunk0024_280_1	32.28828	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr10	41856985	41889331	-91908091	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	32999	0	4
chr10	41889495	41889496	chunk0024_281_1	21.97982	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	41887331	41916263	-91881159	+	(AATGG)n	Simple_repeat	Simple_repeat	1	29510	0	4
chr10	41903479	41903480	chunk0024_282_1	27.7493	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	41887331	41916263	-91881159	+	(AATGG)n	Simple_repeat	Simple_repeat	1	29510	0	4
chr10	41915020	41915021	chunk0024_283_1	13.2094	AR_DHT_Control	chr10	41887331	41916263	-91881159	+	(AATGG)n	Simple_repeat	Simple_repeat	1	29510	0	4
chr10	42080069	42080070	chunk0024_288_1	11.4584	AR_DHT_Control	chr10	42079956	42080088	-91717334	+	(ATCGAATGGAATC)n	Simple_repeat	Simple_repeat	1	149	0	4
chr10	42475386	42475387	chunk0024_302_1	5.73469	AR_DHT_Control	chr10	42475383	42475482	-91321940	-	REP522	Satellite	telo	-862	955	854	4
chr10	42619697	42619698	chunk0024_304_1	24.5288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	42619265	42619931	-91177491	+	L1MB4	LINE	L1	1887	2561	-5059	4
chr10	42629618	42629619	chunk0024_305_1	11.0282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	42629604	42630597	-91166825	-	L1MDa	LINE	L1	-41	3006	1503	4
chr10	42641075	42641076	chunk0024_307_1	42.63614	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	42640727	42641177	-91156245	-	LTR10B1	LTR	ERV1	0	547	1	4
chr10	43017963	43017964	chunk0024_320_1	38.3834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	43016617	43018544	-90778878	-	L1PA8A	LINE	L1	-463	5668	3707	4
chr10	43175169	43175170	chunk0024_328_1	47.8356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	43175096	43175312	-90622110	-	MER58A	DNA	hAT-Charlie	-1	223	4	4
chr10	43187363	43187364	chunk0024_332_1	141.08297	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr10	43186724	43187686	-90609736	-	L1MC1	LINE	L1	0	6333	5359	4
chr10	43340911	43340912	chunk0024_341_1	6.48643	AR_DHT_Control	chr10	43340310	43341284	-90456138	-	L2a	LINE	L2	-169	3257	2081	4
chr10	43499202	43499203	chunk0024_348_1	4.83532	AR_DHT_Control	chr10	43499103	43499397	-90298025	+	L1MEd	LINE	L1	1899	2167	-4919	4
chr10	43532812	43532813	chunk0024_349_1	25.7973	AR_DHT_Control	chr10	43528251	43533614	-90263808	-	L1PA6	LINE	L1	-781	5365	5	4
chr10	43628545	43628546	chunk0024_353_1	31.91735	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	43628446	43629216	-90168206	+	LTR101_Mam	LTR	ERVL	1	807	-22	4
chr10	43981805	43981806	chunk0024_360_1	12.2543	AR_DHT_Control	chr10	43981550	43982295	-89815127	-	L1MB3	LINE	L1	0	6183	5440	4
chr10	44091698	44091699	chunk0024_361_1	33.7193	AR_DHT_Control	chr10	44090920	44097056	-89700366	+	L1PA6	LINE	L1	4	6152	-2	4
chr10	44149583	44149584	chunk0024_363_1	11.1716	AR_DHT_Control	chr10	44147270	44152246	-89645176	-	L1PA4	LINE	L1	-845	5301	297	4
chr10	44192123	44192124	chunk0024_364_1	22.8296	AR_DHT_Control	chr10	44191411	44192234	-89605188	+	L1MC1	LINE	L1	5424	6333	0	4
chr10	44295213	44295214	chunk0024_368_1	5.6503	AR_DHT_Control	chr10	44295092	44295837	-89501585	+	(CA)n	Simple_repeat	Simple_repeat	1	783	0	4
chr10	44326805	44326806	chunk0024_370_1	28.08895	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	44326493	44326845	-89470577	+	L2b	LINE	L2	2915	3288	-99	4
chr10	44501371	44501372	chunk0024_373_1	39.3091	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	44500069	44501470	-89295952	-	L1MB7	LINE	L1	0	6184	4768	4
chr10	44540686	44540687	chunk0024_374_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	44540500	44542053	-89255369	-	L1PA16	LINE	L1	-677	5489	3951	4
chr10	44596907	44596908	chunk0024_375_1	8.64577	AR_DHT_Control	chr10	44593846	44600332	-89197090	+	L1PA8	LINE	L1	10	6483	-4	4
chr10	44633303	44633304	chunk0024_376_1	6.86162	AR_DHT_Control	chr10	44633180	44633508	-89163914	+	L1M4	LINE	L1	5202	5551	-628	4
chr10	44636790	44636791	chunk0024_377_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	44634769	44637404	-89160018	-	Tigger2	DNA	TcMar-Tigger	-34	2684	1	4
chr10	44657190	44657191	chunk0024_378_1	25.6004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	44656310	44657262	-89140160	-	L1MC	LINE	L1	-2351	5434	4469	4
chr10	44688695	44688696	chunk0024_381_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	44688618	44688835	-89108587	-	L1ME3Cz	LINE	L1	-594	403	187	4
chr10	44697286	44697287	chunk0024_382_1	260.7022	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	44697071	44697293	-89100129	-	MIRb	SINE	MIR	-13	255	1	4
chr10	44729786	44729787	chunk0024_383_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	44728372	44731712	-89065710	-	L1MB8	LINE	L1	-2658	3986	496	4
chr10	44884214	44884215	chunk0024_391_1	25.54254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	44884101	44884334	-88913088	+	L1MD2	LINE	L1	5585	5829	-530	4
chr10	45279009	45279010	chunk0024_406_1	19.17509	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	45278975	45279311	-88518111	+	LTR3	LTR	ERVK	95	432	0	4
chr10	45313908	45313909	chunk0024_407_1	9.96971	AR_DHT_Control	chr10	45312591	45314314	-88483108	+	L1M4	LINE	L1	1681	3530	-3108	4
chr10	45357203	45357204	chunk0024_409_1	22.04197	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	45357092	45358748	-88438674	+	L1M4b	LINE	L1	2907	4581	-2984	4
chr10	45361421	45361422	chunk0024_410_1	22.9274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	45358750	45362159	-88435263	+	L1P2	LINE	L1	1	3393	-2753	4
chr10	45502575	45502576	chunk0024_416_1	10.65024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	45502395	45503171	-88294251	+	L1MEf	LINE	L1	1181	2007	-4235	4
chr10	45653257	45653258	chunk0024_419_1	8.64577	AR_DHT_Control	chr10	45653194	45653265	-88144157	-	L3	LINE	CR1	-2	4097	4025	4
chr10	45823073	45823074	chunk0024_421_1	12.1886	AR_DHT_Control	chr10	45823073	45823458	-87973964	+	L2a	LINE	L2	2960	3421	-5	4
chr10	46035334	46035335	chunk0024_426_1	39.11705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	46035173	46035832	-87761590	+	L1MB4	LINE	L1	5537	6180	0	4
chr10	46417376	46417377	chunk0024_439_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	46417183	46417557	-87379865	+	HAL1ME	LINE	L1	2088	2497	-10	4
chr10	46524254	46524255	chunk0024_441_1	7.92341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	46523893	46524639	-87272783	-	LTR8	LTR	ERV1	0	691	1	4
chr10	46531794	46531795	chunk0024_442_1	6.58498	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	46531714	46532370	-87265052	-	L1ME1	LINE	L1	-348	5831	5159	4
chr10	46553116	46553117	chunk0024_443_1	5.84796	AR_DHT_Control	chr10	46552983	46553163	-87244259	-	MIRb	SINE	MIR	-1	267	86	4
chr10	46558819	46558820	chunk0024_444_1	89.64003	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	46558797	46558846	-87238576	-	L2b	LINE	L2	-2	3373	3324	4
chr10	46640087	46640088	chunk0025_1_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	46639876	46640620	-87156802	-	L1MC4a	LINE	L1	-1783	6099	5303	4
chr10	47009649	47009650	chunk0025_3_1	7.36432	AR_DHT_Control	chr10	47009567	47009661	-86787761	-	L3	LINE	CR1	-2549	1550	1442	4
chr10	47067526	47067527	chunk0025_5_1	62.2653	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	47067408	47068195	-86729227	-	L1PA12	LINE	L1	-10	6158	5368	4
chr10	47190504	47190505	chunk0025_7_1	23.0579	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	47190399	47190728	-86606694	+	L1ME4c	LINE	L1	353	688	-142	4
chr10	47254830	47254831	chunk0025_10_1	45.39968	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	47254810	47254871	-86542551	+	(CA)n	Simple_repeat	Simple_repeat	1	61	0	4
chr10	47389823	47389824	chunk0025_15_1	35.6993	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	47389242	47391964	-86405458	-	L1MB4	LINE	L1	0	6781	4028	4
chr10	47701513	47701514	chunk0025_16_1	25.7826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	47701058	47702328	-86095094	+	L1MC4a	LINE	L1	5303	6769	-1113	4
chr10	47967313	47967314	chunk0025_18_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	47967103	47967477	-85829945	-	HAL1ME	LINE	L1	-10	2497	2088	4
chr10	48220122	48220123	chunk0025_21_1	22.8975	AR_DHT_Control	chr10	48219868	48220126	-85577296	+	MIR	SINE	MIR	3	268	0	4
chr10	48251875	48251876	chunk0025_22_1	17.51914	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	48251799	48251891	-85545531	+	L2b	LINE	L2	3281	3373	-2	4
chr10	48337833	48337834	chunk0025_26_1	26.0947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	48336814	48340545	-85456877	+	L1PA17	LINE	L1	2318	6152	-14	4
chr10	48414128	48414129	chunk0025_29_1	7.27655	AR_DHT_Control	chr10	48413892	48414402	-85383020	-	L1MB8	LINE	L1	-1	6177	5662	4
chr10	48518367	48518368	chunk0025_31_1	51.7761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	48518311	48518460	-85278962	-	L2a	LINE	L2	-70	3356	3206	4
chr10	48756205	48756206	chunk0025_33_1	20.82228	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	48754940	48757176	-85040246	-	L1ME1	LINE	L1	-28	6549	3801	4
chr10	48798739	48798740	chunk0025_35_1	14.12513	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	48798722	48798859	-84998563	+	L1M4	LINE	L1	3622	3765	-2381	4
chr10	49021931	49021932	chunk0025_39_1	13.5394	AR_DHT_Control	chr10	49021896	49021935	-84775487	+	(TGTA)n	Simple_repeat	Simple_repeat	1	39	0	4
chr10	49107243	49107244	chunk0025_41_1	11.2223	AR_DHT_Control	chr10	49106749	49107290	-84690132	+	MER67A	LTR	ERV1	1	543	0	4
chr10	49207539	49207540	chunk0025_42_1	44.3548	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	49207538	49207650	-84589772	+	L1ME4a	LINE	L1	5969	6083	-41	4
chr10	49253005	49253006	chunk0025_44_1	24.81525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	49252434	49253026	-84544396	-	L1MD2	LINE	L1	-10	6349	5680	4
chr10	49414631	49414632	chunk0025_49_1	11.088	AR_DHT_Control	chr10	49414624	49415561	-84381861	+	L1MC4	LINE	L1	6808	7908	-134	4
chr10	49419182	49419183	chunk0025_50_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	49419077	49419235	-84378187	+	MIRc	SINE	MIR	13	196	-72	4
chr10	49436353	49436354	chunk0025_51_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	49436122	49436947	-84360475	+	L1ME3F	LINE	L1	4909	5827	-416	4
chr10	49496110	49496111	chunk0025_52_1	5.00158	AR_DHT_Control	chr10	49495447	49496391	-84301031	+	L2c	LINE	L2	2261	3382	-5	4
chr10	49561875	49561876	chunk0025_62_1	6.7814	AR_DHT_Control	chr10	49561822	49562031	-84235391	+	LTR41	LTR	ERVL	553	767	-1	4
chr10	49845017	49845018	chunk0025_68_1	18.56837	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	49844789	49845345	-83952077	+	L1MC4	LINE	L1	5175	5722	-442	4
chr10	50237230	50237231	chunk0025_74_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	50237219	50237594	-83559828	+	MLT1F	LTR	ERVL-MaLR	183	548	0	4
chr10	50362705	50362706	chunk0025_79_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	50362474	50362715	-83434707	+	L1MEd	LINE	L1	503	770	-6316	4
chr10	50395501	50395502	chunk0025_85_1	17.07192	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	50395327	50395973	-83401449	+	Tigger13a	DNA	TcMar-Tigger	1	682	-89	4
chr10	50438612	50438613	chunk0025_86_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	50438149	50438665	-83358757	+	MLT1F2	LTR	ERVL-MaLR	10	560	0	4
chr10	50455057	50455058	chunk0025_87_1	9.63462	AR_DHT_Control	chr10	50454939	50455155	-83342267	+	L2a	LINE	L2	3217	3423	-3	4
chr10	50510849	50510850	chunk0025_88_1	20.93858	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	50510613	50510928	-83286494	-	L1MC4a	LINE	L1	0	7882	7660	4
chr10	50561480	50561481	chunk0025_94_1	26.43223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	50561395	50561483	-83235939	+	MIR3	SINE	MIR	113	201	-7	4
chr10	50596767	50596768	chunk0025_102_1	4.46365	AR_DHT_Control	chr10	50596720	50596899	-83200523	-	MIRb	SINE	MIR	-9	259	83	4
chr10	50614609	50614610	chunk0025_103_1	4.15002	AR_DHT_Control	chr10	50614485	50614679	-83182743	+	MER5A	DNA	hAT-Charlie	1	189	0	4
chr10	51074703	51074704	chunk0025_108_1	18.29367	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	51074668	51074730	-82722692	+	(GAGCTG)n	Simple_repeat	Simple_repeat	1	62	0	4
chr10	51610826	51610827	chunk0025_120_1	11.1716	AR_DHT_Control	chr10	51610588	51611067	-82186355	+	L1PA8	LINE	L1	5703	6172	0	4
chr10	51862130	51862131	chunk0025_128_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	51861790	51862787	-81934635	-	LTR27E	LTR	ERV1	0	1077	1	4
chr10	51998380	51998381	chunk0025_131_1	17.0206	AR_DHT_Control	chr10	51998377	51998591	-81798831	-	L1MEd	LINE	L1	-6862	241	20	4
chr10	52206861	52206862	chunk0025_141_1	12.6211	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	52205493	52207967	-81589455	-	L1PA15	LINE	L1	-4101	2684	294	4
chr10	52255675	52255676	chunk0025_148_1	30.18726	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	52255573	52255713	-81541709	-	L2c	LINE	L2	-36	3339	3185	4
chr10	52415922	52415923	chunk0025_154_1	7.36432	AR_DHT_Control	chr10	52414808	52416113	-81381309	-	L1MC4	LINE	L1	-159	7883	6459	4
chr10	52615780	52615781	chunk0025_162_1	60.7068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	52615488	52616393	-81181029	-	L2a	LINE	L2	0	3426	2437	4
chr10	52631517	52631518	chunk0025_164_1	51.3847	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	52631142	52631686	-81165736	+	L2a	LINE	L2	2818	3426	0	4
chr10	52797423	52797424	chunk0025_169_1	36.39339	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	52797103	52797465	-80999957	+	THE1D	LTR	ERVL-MaLR	3	381	0	4
chr10	52837623	52837624	chunk0025_175_1	42.2887	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	52837429	52837802	-80959620	+	LTR37A	LTR	ERV1	5	398	-28	4
chr10	52938905	52938906	chunk0025_177_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	52938417	52939089	-80858333	-	L1ME2	LINE	L1	-1	7254	6580	4
chr10	52945732	52945733	chunk0025_178_1	25.0092	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	52945484	52946067	-80851355	+	LTR10C	LTR	ERV1	1	591	0	4
chr10	53123331	53123332	chunk0025_180_1	5.6425	AR_DHT_Control	chr10	53122849	53123789	-80673633	-	MER21-int	LTR	ERVL	-1114	3077	2072	4
chr10	53157859	53157860	chunk0025_182_1	20.86805	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	53157302	53158046	-80639376	+	L1MC4a	LINE	L1	5825	6596	-1286	4
chr10	53225339	53225340	chunk0025_187_1	49.6384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	53225093	53226474	-80570948	+	L1MA4	LINE	L1	2377	3874	-3688	4
chr10	53272198	53272199	chunk0025_190_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	53271613	53273279	-80524143	+	L1PB2	LINE	L1	713	2141	-4775	4
chr10	53277199	53277200	chunk0025_191_1	37.2656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	53273496	53277997	-80519425	+	L1PB2	LINE	L1	2142	6914	-6	4
chr10	53344575	53344576	chunk0025_195_1	32.17731	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	53344571	53344741	-80452681	+	L1MCc	LINE	L1	824	998	-5425	4
chr10	53373091	53373092	chunk0025_198_1	7.36432	AR_DHT_Control	chr10	53370090	53376200	-80421222	+	L1PA6	LINE	L1	5	6154	0	4
chr10	53404033	53404034	chunk0025_199_1	13.69123	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	53402938	53405196	-80392226	+	L1PBb	LINE	L1	186	1643	-5220	4
chr10	53473836	53473837	chunk0025_200_1	20.8835	AR_DHT_Control	chr10	53472872	53473911	-80323511	+	L1ME2z	LINE	L1	4927	6068	-376	4
chr10	53534057	53534058	chunk0025_201_1	11.01058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	53533996	53534099	-80263323	-	LTR16E1	LTR	ERVL	-24	514	413	4
chr10	53556460	53556461	chunk0025_203_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	53556425	53557104	-80240318	+	L1MCc	LINE	L1	5607	6287	-697	4
chr10	53579519	53579520	chunk0025_205_1	33.2404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	53579426	53580163	-80217259	-	L1MC3	LINE	L1	-8	7777	7013	4
chr10	53844045	53844046	chunk0025_214_1	22.8566	AR_DHT_Control	chr10	53843822	53844316	-79953106	-	L2a	LINE	L2	0	3426	2733	4
chr10	53865547	53865548	chunk0025_215_1	7.66459	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	53865454	53865559	-79931863	+	L1MA5A	LINE	L1	5839	5944	-353	4
chr10	53873408	53873409	chunk0025_218_1	5.24411	AR_DHT_Control	chr10	53873368	53873582	-79923840	-	MIR	SINE	MIR	-9	259	21	4
chr10	53986594	53986595	chunk0025_224_1	30.2719	AR_DHT_Control	chr10	53986090	53986865	-79810557	+	L1MB1	LINE	L1	5278	6043	-125	4
chr10	54035292	54035293	chunk0025_227_1	18.00258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	54035225	54037715	-79759707	+	Tigger1	DNA	TcMar-Tigger	1	2418	0	4
chr10	54223419	54223420	chunk0025_236_1	103.0946	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	54223330	54223544	-79573878	-	L1ME1	LINE	L1	-1066	5080	4873	4
chr10	54277401	54277402	chunk0025_240_1	25.7015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	54277271	54277453	-79519969	+	MLT1I-int	LTR	ERVL-MaLR	26	212	-1175	4
chr10	54326550	54326551	chunk0025_241_1	7.36432	AR_DHT_Control	chr10	54326499	54326708	-79470714	-	MIR	SINE	MIR	-25	237	19	4
chr10	54603294	54603295	chunk0025_249_1	6.48643	AR_DHT_Control	chr10	54602178	54603500	-79193922	-	L1M4	LINE	L1	-1663	5069	3614	4
chr10	54936309	54936310	chunk0025_256_1	17.4005	AR_DHT_Control	chr10	54935882	54938615	-78858807	-	L1MB8	LINE	L1	-12	7026	4324	4
chr10	55221447	55221448	chunk0025_258_1	54.8693	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	55221317	55221489	-78575933	-	MER63D	DNA	hAT-Blackjack	-55	1006	816	4
chr10	55249093	55249094	chunk0025_259_1	16.31825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	55248856	55249514	-78547908	+	L1MC	LINE	L1	4552	5258	-882	4
chr10	55409866	55409867	chunk0025_262_1	11.3519	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	55409575	55409970	-78387452	+	L1ME5	LINE	L1	5776	6187	-7	4
chr10	56118125	56118126	chunk0025_271_1	27.42636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	56118113	56118565	-77678857	+	L1MDa	LINE	L1	46	531	-6102	4
chr10	56203916	56203917	chunk0025_275_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	56201540	56204398	-77593024	+	L1PA5	LINE	L1	672	3824	-2495	4
chr10	56213259	56213260	chunk0025_276_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	56213113	56213811	-77583611	-	L1PA13	LINE	L1	-5597	1189	218	4
chr10	56245527	56245528	chunk0025_277_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	56245387	56245596	-77551826	+	MIRb	SINE	MIR	45	254	-14	4
chr10	56384036	56384037	chunk0025_279_1	226.2226	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	56380655	56385259	-77412163	-	L1MB1	LINE	L1	-5	6866	2140	4
chr10	56823906	56823907	chunk0025_291_1	6.48643	AR_DHT_Control	chr10	56823905	56824229	-76973193	+	L1PB4	LINE	L1	1380	1800	-5415	4
chr10	57016079	57016080	chunk0025_296_1	14.39823	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	57016068	57016323	-76781099	+	HERVL18-int	LTR	ERVL	2119	2449	-3598	4
chr10	57169065	57169066	chunk0025_299_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	57166914	57170299	-76627123	+	L1PA15	LINE	L1	2993	6469	-842	4
chr10	57469088	57469089	chunk0025_302_1	88.2723	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	57468801	57469352	-76328070	-	MLT1E2	LTR	ERVL-MaLR	0	627	80	4
chr10	57638679	57638680	chunk0025_307_1	31.32448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	57638480	57639678	-76157744	+	Tigger3b	DNA	TcMar-Tigger	1	1226	-5	4
chr10	57650260	57650261	chunk0025_311_1	132.9978	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	57649733	57651588	-76145834	-	L1MA1	LINE	L1	0	6302	4448	4
chr10	57703951	57703952	chunk0025_314_1	64.92757	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	57703864	57704301	-76093121	+	Tigger17c	DNA	TcMar-Tigger	1	450	-738	4
chr10	57746036	57746037	chunk0025_319_1	8.79298	AR_DHT_Control	chr10	57745837	57746207	-76051215	-	L1PA15	LINE	L1	-6	6159	5784	4
chr10	57747009	57747010	chunk0025_320_1	17.05417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	57746504	57747680	-76049742	-	L1PA15	LINE	L1	-382	5783	4561	4
chr10	57759911	57759912	chunk0025_323_1	499.3917	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr10	57758998	57760163	-76037259	+	L1PA15	LINE	L1	4980	6158	-7	4
chr10	57870470	57870471	chunk0025_327_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	57870334	57870719	-75926703	-	L1PA15	LINE	L1	0	6165	5783	4
chr10	57898528	57898529	chunk0025_328_1	7.36432	AR_DHT_Control	chr10	57898065	57898776	-75898646	+	LTR9A1	LTR	ERV1	1	728	0	4
chr10	57963044	57963045	chunk0025_334_1	155.4815	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	57962737	57963233	-75834189	+	MLT1D	LTR	ERVL-MaLR	1	503	-2	4
chr10	58121353	58121354	chunk0025_344_1	14.38105	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58121177	58121584	-75675838	-	L1M5	LINE	L1	-1260	4886	4487	4
chr10	58149028	58149029	chunk0025_346_1	33.60051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58148956	58149116	-75648306	+	MER5B	DNA	hAT-Charlie	1	172	-6	4
chr10	58170855	58170856	chunk0025_349_1	9.28153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58170634	58171032	-75626390	+	L1M5	LINE	L1	2656	3053	-3093	4
chr10	58353431	58353432	chunk0025_355_1	24.10926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58353348	58353515	-75443907	+	MamSINE1	SINE	tRNA-RTE	91	265	-25	4
chr10	58509736	58509737	chunk0025_361_1	37.666	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58509038	58510728	-75286694	+	L2a	LINE	L2	1242	3057	-362	4
chr10	58622008	58622009	chunk0025_365_1	22.87769	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	58621970	58622210	-75175212	+	AluJb	SINE	Alu	94	310	-2	4
chr10	58630041	58630042	chunk0025_366_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	58629990	58630159	-75167263	+	MLT1M	LTR	ERVL-MaLR	95	262	-410	4
chr10	58678999	58679000	chunk0025_370_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58675839	58681636	-75115786	+	L1PA7	LINE	L1	11	5811	-528	4
chr10	58747916	58747917	chunk0025_371_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	58747805	58748018	-75049404	+	MER58A	DNA	hAT-Charlie	1	213	-11	4
chr10	59058318	59058319	chunk0025_374_1	6.3364	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	59058282	59058333	-74739089	+	(TGTT)n	Simple_repeat	Simple_repeat	1	51	0	4
chr10	59315249	59315250	chunk0025_387_1	5.28628	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	59315221	59315414	-74482008	-	L1ME4a	LINE	L1	-85	6039	5819	4
chr10	59315650	59315651	chunk0025_388_1	11.5199	AR_DHT_Control	chr10	59315462	59315656	-74481766	+	MER20B	DNA	hAT-Charlie	6	203	-580	4
chr10	59375565	59375566	chunk0025_396_1	14.14623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	59375293	59375779	-74421643	-	MER110A	LTR	ERV1	0	491	44	4
chr10	59396094	59396095	chunk0025_397_1	7.36432	AR_DHT_Control	chr10	59395937	59396244	-74401178	+	LTR40a	LTR	ERVL	5	292	-227	4
chr10	59958055	59958056	chunk0025_429_1	10.1791	AR_DHT_Control	chr10	59957900	59958146	-73839276	-	L1MB7	LINE	L1	-9	6175	5927	4
chr10	60295571	60295572	chunk0025_451_1	27.4901	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	60295490	60295595	-73501827	-	MamSINE1	SINE	tRNA-RTE	-172	118	3	4
chr10	60331328	60331329	chunk0026_1_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	60331269	60331457	-73465965	+	L1ME4a	LINE	L1	5818	6026	-98	4
chr10	60473805	60473806	chunk0026_9_1	82.4965	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	60473697	60473847	-73323575	+	Charlie16a	DNA	hAT-Charlie	64	208	-134	4
chr10	60490344	60490345	chunk0026_11_1	5.08049	AR_DHT_Control	chr10	60490220	60490387	-73307035	+	MER5A	DNA	hAT-Charlie	1	189	0	4
chr10	60531319	60531320	chunk0026_16_1	9.58976	AR_DHT_Control	chr10	60531160	60531521	-73265901	+	L1ME4b	LINE	L1	475	852	-40	4
chr10	60630857	60630858	chunk0026_20_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	60630837	60631139	-73166283	-	L2a	LINE	L2	-646	2773	2471	4
chr10	60646119	60646120	chunk0026_21_1	12.9431	AR_DHT_Control	chr10	60645804	60646430	-73150992	-	L2c	LINE	L2	-17	3409	2719	4
chr10	60719696	60719697	chunk0026_30_1	24.4942	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	60719096	60719725	-73077697	-	L1ME4b	LINE	L1	-346	546	7	4
chr10	60725274	60725275	chunk0026_32_1	94.61288	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	60724902	60725570	-73071852	-	L1ME5	LINE	L1	-9	6185	5475	4
chr10	60781863	60781864	chunk0026_40_1	28.559	AR_DHT_Control	chr10	60781806	60781902	-73015520	+	L2a	LINE	L2	3311	3408	-18	4
chr10	60956311	60956312	chunk0026_50_1	86.2701	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	60955995	60956780	-72840642	-	Tigger3b	DNA	TcMar-Tigger	0	1231	442	4
chr10	61029693	61029694	chunk0026_53_1	38.43351	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	61029631	61029847	-72767575	-	MIRb	SINE	MIR	-33	235	8	4
chr10	61150105	61150106	chunk0026_65_1	9.23066	AR_DHT_Control	chr10	61149881	61150347	-72647075	+	L1ME3A	LINE	L1	5573	6043	-130	4
chr10	61179539	61179540	chunk0026_68_1	16.17116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	61179466	61179621	-72617801	+	UCON4	Unknown	Unknown	135	290	-13	4
chr10	61343130	61343131	chunk0026_82_1	8.52761	AR_DHT_Control	chr10	61342986	61343290	-72454132	-	LTR33	LTR	ERVL	-207	308	2	4
chr10	61454728	61454729	chunk0026_86_1	6.6363	AR_DHT_Control	chr10	61454513	61454743	-72342679	-	L4_A_Mam	LINE	RTE-X	-251	4739	4488	4
chr10	61458189	61458190	chunk0026_88_1	31.51044	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	61457508	61458863	-72338559	-	HAL1ME	LINE	L1	-867	1598	62	4
chr10	61562855	61562856	chunk0026_90_1	46.7106	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	61562667	61563421	-72234001	+	L1MC2	LINE	L1	5599	6341	-3	4
chr10	61626636	61626637	chunk0026_96_1	5.60066	AR_DHT_Control	chr10	61626601	61626826	-72170596	-	L1ME1	LINE	L1	-3	6176	5944	4
chr10	61829032	61829033	chunk0026_106_1	6.88185	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	61828956	61829175	-71968247	+	MER58A	DNA	hAT-Charlie	2	220	-4	4
chr10	61848209	61848210	chunk0026_108_1	5.50529	AR_DHT_Control	chr10	61848128	61848631	-71948791	+	L1ME3G	LINE	L1	11	535	-389	4
chr10	61923487	61923488	chunk0026_112_1	14.10108	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	61923187	61923535	-71873887	+	L2b	LINE	L2	3030	3374	-1	4
chr10	62048325	62048326	chunk0026_129_1	8.49128	AR_DHT_Control	chr10	62048225	62048433	-71748989	-	L2c	LINE	L2	-5	3382	3183	4
chr10	62107272	62107273	chunk0026_133_1	5.53391	AR_DHT_Control	chr10	62106637	62107449	-71689973	+	L1ME4b	LINE	L1	5017	5399	-747	4
chr10	62111740	62111741	chunk0026_134_1	31.7705	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	62111553	62111780	-71685642	-	MIR	SINE	MIR	-21	241	4	4
chr10	62175933	62175934	chunk0026_138_1	30.6283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	62174766	62176355	-71621067	+	L1MEc	LINE	L1	3093	4735	-1584	4
chr10	62292219	62292220	chunk0026_142_1	32.4975	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	62292077	62292312	-71505110	+	L4_A_Mam	LINE	RTE-X	3837	4059	-931	4
chr10	62295709	62295710	chunk0026_144_1	19.28513	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	62295168	62296227	-71501195	+	L1ME1	LINE	L1	5099	6139	-40	4
chr10	62306937	62306938	chunk0026_146_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	62306819	62307655	-71489767	-	LTR1D1	LTR	ERV1	0	899	1	4
chr10	62381918	62381919	chunk0026_147_1	5.56779	AR_DHT_Control	chr10	62381913	62382096	-71415326	-	L2b	LINE	L2	-13	3362	3166	4
chr10	62405121	62405122	chunk0026_148_1	96.1206	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	62405054	62405321	-71392101	+	MamRep137	DNA	TcMar-Tigger	203	462	-48	4
chr10	63099666	63099667	chunk0026_163_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	63099455	63100356	-70697066	-	Arthur1	DNA	hAT-Tip100	-1689	2258	1308	4
chr10	63297843	63297844	chunk0026_174_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	63297172	63298337	-70499085	+	LTR2752	LTR	ERV1	64	1246	-17	4
chr10	63314149	63314150	chunk0026_176_1	17.10603	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	63312951	63314238	-70483184	-	L1PB1	LINE	L1	-2	6149	4835	4
chr10	63487565	63487566	chunk0026_181_1	37.8227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	63487557	63487711	-70309711	-	L2c	LINE	L2	-2183	1236	1073	4
chr10	63563142	63563143	chunk0026_186_1	8.52187	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	63562836	63563216	-70234206	+	MLT1B	LTR	ERVL-MaLR	1	390	0	4
chr10	63572741	63572742	chunk0026_188_1	44.4036	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	63572661	63572850	-70224572	+	L2a	LINE	L2	3211	3426	0	4
chr10	63672406	63672407	chunk0026_194_1	6.26854	AR_DHT_Control	chr10	63672397	63672731	-70124691	-	LTR16C	LTR	ERVL	0	489	153	4
chr10	63761218	63761219	chunk0026_204_1	5.40567	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	63761176	63761619	-70035803	-	MLT1K	LTR	ERVL-MaLR	-112	483	4	4
chr10	64071901	64071902	chunk0026_210_1	21.7282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	64070891	64072375	-69725047	-	L1PA17	LINE	L1	0	6166	4680	4
chr10	64117010	64117011	chunk0026_212_1	7.2534	AR_DHT_Control	chr10	64116841	64117403	-69680019	+	MER41C	LTR	ERV1	1	521	0	4
chr10	64573894	64573895	chunk0026_216_1	51.263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	64573238	64573942	-69223480	+	L1MB7	LINE	L1	5447	6172	-12	4
chr10	64574596	64574597	chunk0026_218_1	5.25501	AR_DHT_Control	chr10	64574464	64574775	-69222647	+	L2a	LINE	L2	2825	3152	-274	4
chr10	64650631	64650632	chunk0026_219_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	64650545	64650767	-69146655	-	MIR	SINE	MIR	-5	257	33	4
chr10	64796188	64796189	chunk0026_220_1	7.36432	AR_DHT_Control	chr10	64795873	64796268	-69001154	+	L2a	LINE	L2	2911	3361	-65	4
chr10	64867973	64867974	chunk0026_221_1	82.1651	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	64867287	64867987	-68929435	-	MER61E	LTR	ERV1	-5	774	1	4
chr10	65083557	65083558	chunk0026_225_1	11.1716	AR_DHT_Control	chr10	65083278	65084522	-68712900	-	LTR2752	LTR	ERV1	0	1263	1	4
chr10	65120153	65120154	chunk0026_227_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	65119732	65122317	-68675105	-	L1PA17	LINE	L1	-426	5740	3145	4
chr10	65156154	65156155	chunk0026_228_1	8.82835	AR_DHT_Control	chr10	65156038	65156374	-68641048	-	L2c	LINE	L2	-84	3303	2910	4
chr10	65237909	65237910	chunk0026_229_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	65237724	65238176	-68559246	-	L1M5	LINE	L1	-1017	5129	4631	4
chr10	65498119	65498120	chunk0026_232_1	22.01038	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	65498092	65498371	-68299051	+	ERVL-B4-int	LTR	ERVL	1910	2188	-3526	4
chr10	65794154	65794155	chunk0026_235_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	65794097	65794494	-68002928	+	MER57B1	LTR	ERV1	1	401	0	4
chr10	66288009	66288010	chunk0026_242_1	19.3954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	66287926	66288134	-67509288	+	L1MC4a	LINE	L1	6447	6653	-1229	4
chr10	66414963	66414964	chunk0026_248_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	66414210	66418556	-67378866	+	L1MA4A	LINE	L1	720	5092	-2470	4
chr10	66440825	66440826	chunk0026_249_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	66440655	66440868	-67356554	+	MIR	SINE	MIR	3	262	0	4
chr10	66487662	66487663	chunk0026_250_1	12.3053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	66487526	66487699	-67309723	+	L1MA9	LINE	L1	6125	6289	-23	4
chr10	66510172	66510173	chunk0026_251_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	66508602	66513293	-67284129	-	L1MA5A	LINE	L1	-354	7362	2682	4
chr10	66513547	66513548	chunk0026_252_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	66513274	66513805	-67283617	-	L1MA5A	LINE	L1	-5290	2276	1357	4
chr10	66656566	66656567	chunk0026_257_1	29.94405	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	66656172	66656587	-67140835	+	L3	LINE	CR1	3646	4089	-10	4
chr10	66921911	66921912	chunk0026_264_1	5.47663	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	66921370	66921933	-66875489	+	L2a	LINE	L2	2796	3425	-1	4
chr10	67211638	67211639	chunk0026_276_1	11.582	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	67211543	67211690	-66585732	-	L2c	LINE	L2	0	3387	3253	4
chr10	67374303	67374304	chunk0026_282_1	31.3932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	67374116	67374339	-66423083	-	MER58A	DNA	hAT-Charlie	-1	223	1	4
chr10	67410879	67410880	chunk0026_283_1	5.44741	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	67410536	67411340	-66386082	+	L1MA8	LINE	L1	5495	6286	-5	4
chr10	67492484	67492485	chunk0026_285_1	12.5164	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	67492470	67492503	-66304919	-	L2a	LINE	L2	0	3426	3394	4
chr10	67547844	67547845	chunk0026_287_1	15.9612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	67547762	67547988	-66249434	+	L1M4	LINE	L1	4369	4596	-1550	4
chr10	67707377	67707378	chunk0026_290_1	20.22834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	67706787	67707652	-66089770	+	L2a	LINE	L2	2319	3291	-84	4
chr10	67738203	67738204	chunk0026_291_1	27.7202	AR_DHT_Control	chr10	67737948	67739306	-66058116	+	L1PA4	LINE	L1	2713	3876	-4303	4
chr10	67819963	67819964	chunk0026_297_1	7.36432	AR_DHT_Control	chr10	67819828	67820252	-65977170	-	L2b	LINE	L2	0	3375	2940	4
chr10	67901776	67901777	chunk0026_298_1	11.4842	AR_DHT_Control	chr10	67901727	67901802	-65895620	+	MER58C	DNA	hAT-Charlie	1	76	-139	4
chr10	67976933	67976934	chunk0026_305_1	4.19326	AR_DHT_Control	chr10	67976490	67977699	-65819723	+	L1MA2	LINE	L1	17	1283	-6282	4
chr10	67981556	67981557	chunk0026_306_1	25.0902	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	67980432	67981674	-65815748	+	L1MA2	LINE	L1	2919	4194	-3371	4
chr10	68018467	68018468	chunk0026_307_1	16.31813	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	68017788	68018986	-65778436	+	L1M5	LINE	L1	3364	4675	-1471	4
chr10	68047853	68047854	chunk0026_309_1	22.95567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	68047413	68047918	-65749504	+	L1MC1	LINE	L1	5184	5697	-636	4
chr10	68126126	68126127	chunk0026_321_1	23.6465	AR_DHT_Control	chr10	68125894	68126235	-65671187	-	L2c	LINE	L2	-94	3293	2894	4
chr10	68223717	68223718	chunk0026_326_1	22.5646	AR_DHT_Control	chr10	68223657	68224089	-65573333	-	MER74B	LTR	ERVL	-74	548	123	4
chr10	68321733	68321734	chunk0026_329_1	21.2543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	68321586	68322379	-65475043	+	L1MC3	LINE	L1	6732	7629	-156	4
chr10	68400280	68400281	chunk0026_334_1	9.21264	AR_DHT_Control	chr10	68400093	68400345	-65397077	+	AluSz6	SINE	Alu	66	310	-2	4
chr10	68516419	68516420	chunk0026_340_1	27.9662	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	68516078	68516670	-65280752	-	LTR10C	LTR	ERV1	-2	589	1	4
chr10	68620497	68620498	chunk0026_344_1	8.27376	AR_DHT_Control	chr10	68620204	68621142	-65176280	-	L1MB8	LINE	L1	-57	6121	5101	4
chr10	68812688	68812689	chunk0026_352_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	68812224	68812995	-64984427	-	L1MDa	LINE	L1	-5501	1132	339	4
chr10	68837944	68837945	chunk0026_353_1	19.6372	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	68837896	68838054	-64959368	-	L1M3	LINE	L1	-1624	4516	4372	4
chr10	69114554	69114555	chunk0026_359_1	23.4316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	69114488	69115731	-64681691	+	HSMAR1	DNA	TcMar-Mariner	1	1257	-30	4
chr10	69204140	69204141	chunk0026_362_1	10.8743	AR_DHT_Control	chr10	69204027	69204242	-64593180	+	L1ME4c	LINE	L1	461	675	-155	4
chr10	69250974	69250975	chunk0026_364_1	32.91989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	69250961	69251081	-64546341	-	L4_C_Mam	LINE	RTE-X	-181	4957	4829	4
chr10	69315209	69315210	chunk0026_368_1	150.3417	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	69315076	69315224	-64482198	+	MIRc	SINE	MIR	105	251	-17	4
chr10	69330710	69330711	chunk0026_369_1	13.9652	AR_DHT_Control	chr10	69330589	69330868	-64466554	+	MER39	LTR	ERV1	67	540	-167	4
chr10	69387073	69387074	chunk0026_378_1	36.2865	AR_DHT_Control	chr10	69386973	69387164	-64410258	+	MER90a	LTR	ERV1	1	170	-405	4
chr10	69431181	69431182	chunk0026_382_1	26.56699	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	69431089	69431331	-64366091	-	L1MEj	LINE	L1	-3485	2661	2423	4
chr10	69446769	69446770	chunk0026_384_1	13.06154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	69446744	69446828	-64350594	+	L2b	LINE	L2	3281	3365	-10	4
chr10	69538806	69538807	chunk0026_387_1	6.62034	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	69538736	69538842	-64258580	-	MER115	DNA	hAT-Tip100	-263	430	322	4
chr10	69662469	69662470	chunk0026_390_1	38.9419	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	69662352	69662495	-64134927	-	MIRb	SINE	MIR	-9	259	95	4
chr10	69703867	69703868	chunk0026_393_1	11.1584	AR_DHT_Control	chr10	69703646	69704171	-64093251	-	L1ME2	LINE	L1	-304	5860	5354	4
chr10	69724234	69724235	chunk0026_394_1	5.40815	AR_DHT_Control	chr10	69724105	69724434	-64072988	-	L2a	LINE	L2	-2	3424	3064	4
chr10	69745144	69745145	chunk0026_396_1	6.21736	AR_DHT_Control	chr10	69745082	69745191	-64052231	+	MIRc	SINE	MIR	1	113	-155	4
chr10	69845887	69845888	chunk0026_399_1	8.18895	AR_DHT_Control	chr10	69845753	69845893	-63951529	+	MER5A	DNA	hAT-Charlie	35	189	0	4
chr10	70055431	70055432	chunk0026_402_1	24.60624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	70055411	70055508	-63741914	-	FLAM_C	SINE	Alu	-2	131	35	4
chr10	70345544	70345545	chunk0026_411_1	37.2954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	70344866	70345669	-63451753	+	L1MC	LINE	L1	4484	5383	-763	4
chr10	70448619	70448620	chunk0026_414_1	52.9384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	70448538	70448888	-63348534	+	AluSz	SINE	Alu	1	302	-10	4
chr10	70889225	70889226	chunk0026_427_1	10.0817	AR_DHT_Control	chr10	70888831	70890211	-62907211	-	L1ME1	LINE	L1	0	6179	4694	4
chr10	70900371	70900372	chunk0026_428_1	78.4529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	70899836	70900828	-62896594	-	L1M5	LINE	L1	-895	5251	4247	4
chr10	71196955	71196956	chunk0026_432_1	5.00261	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	71196877	71197087	-62600335	-	MIRb	SINE	MIR	-37	231	15	4
chr10	71348207	71348208	chunk0026_439_1	8.80199	AR_DHT_Control	chr10	71348146	71348237	-62449185	-	L2b	LINE	L2	0	3375	3264	4
chr10	71391927	71391928	chunk0026_441_1	30.34977	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	71391490	71391950	-62405472	+	L2c	LINE	L2	2910	3386	-1	4
chr10	71414778	71414779	chunk0026_443_1	6.48643	AR_DHT_Control	chr10	71414084	71415100	-62382322	-	L1MEg	LINE	L1	-1890	4256	3260	4
chr10	71505885	71505886	chunk0026_445_1	55.8024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	71505764	71506418	-62291004	+	L1MB5	LINE	L1	5526	6174	0	4
chr10	71959791	71959792	chunk0027_6_1	21.16051	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	71957209	71961280	-61836142	+	HERVK14-int	LTR	ERVK	185	4309	-1787	4
chr10	72030984	72030985	chunk0027_9_1	7.36432	AR_DHT_Control	chr10	72030760	72030985	-61766437	-	MER67A	LTR	ERV1	-196	347	107	4
chr10	72096655	72096656	chunk0027_10_1	12.2069	AR_DHT_Control	chr10	72096574	72097089	-61700333	+	L1MB3	LINE	L1	5652	6182	-1	4
chr10	72119641	72119642	chunk0027_16_1	128.58607	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	72118876	72119954	-61677468	+	L1MCa	LINE	L1	1	1036	-5472	4
chr10	72243929	72243930	chunk0027_20_1	20.62653	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	72243659	72244031	-61553391	-	L2c	LINE	L2	-107	3280	2914	4
chr10	72436093	72436094	chunk0027_38_1	22.04555	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	72435420	72441564	-61355858	+	L1PA6	LINE	L1	177	6327	0	4
chr10	72450071	72450072	chunk0027_39_1	16.90759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	72449992	72450449	-61346973	-	L2c	LINE	L2	0	3387	2917	4
chr10	72535982	72535983	chunk0027_41_1	16.4778	AR_DHT_Control	chr10	72535876	72536334	-61261088	+	L1MA5A	LINE	L1	5813	6293	-4	4
chr10	72742253	72742254	chunk0027_45_1	7.36432	AR_DHT_Control	chr10	72742051	72742363	-61055059	+	Tigger3a	DNA	TcMar-Tigger	26	348	0	4
chr10	72816762	72816763	chunk0027_52_1	39.3861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	72816499	72816775	-60980647	+	AluJo	SINE	Alu	2	301	-11	4
chr10	72876419	72876420	chunk0027_54_1	17.07465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	72876088	72876858	-60920564	+	L2	LINE	L2	824	1749	-1670	4
chr10	73087147	73087148	chunk0027_62_1	5.91555	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	73086969	73087264	-60710158	-	L1MD	LINE	L1	-507	5672	5402	4
chr10	73167827	73167828	chunk0027_69_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	73167669	73167834	-60629588	-	MIR3	SINE	MIR	-2	206	17	4
chr10	73175776	73175777	chunk0027_70_1	32.888	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	73175770	73175883	-60621539	+	MIRb	SINE	MIR	25	166	-102	4
chr10	73185573	73185574	chunk0027_74_1	33.3165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	73185565	73185737	-60611685	+	L1MEf	LINE	L1	3502	3674	-2472	4
chr10	73332435	73332436	chunk0027_76_1	10.1791	AR_DHT_Control	chr10	73331986	73333921	-60463501	+	L1MCa	LINE	L1	36	2140	-4611	4
chr10	73359732	73359733	chunk0027_78_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	73359454	73360513	-60436909	+	L1MC4	LINE	L1	6945	8039	-3	4
chr10	73503387	73503388	chunk0027_82_1	4.84918	AR_DHT_Control	chr10	73503232	73503453	-60293969	+	L2c	LINE	L2	3136	3375	-12	4
chr10	74014937	74014938	chunk0027_107_1	18.56256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74014708	74014985	-59782437	-	AluJb	SINE	Alu	-26	286	2	4
chr10	74046189	74046190	chunk0027_108_1	8.27376	AR_DHT_Control	chr10	74046166	74046203	-59751219	+	MIR3	SINE	MIR	150	187	-21	4
chr10	74051713	74051714	chunk0027_109_1	7.27847	AR_DHT_Control	chr10	74051666	74051746	-59745676	+	MIR	SINE	MIR	149	218	-44	4
chr10	74127081	74127082	chunk0027_116_1	42.4752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74127040	74127216	-59670206	+	MER2	DNA	TcMar-Tigger	139	336	-9	4
chr10	74190167	74190168	chunk0027_122_1	44.8549	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	74189591	74190261	-59607161	-	L1MB7	LINE	L1	-21	6163	5479	4
chr10	74207056	74207057	chunk0027_123_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	74206835	74208406	-59589016	-	MER52A	LTR	ERV1	0	1755	1	4
chr10	74223626	74223627	chunk0027_125_1	26.78094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	74223523	74223659	-59573763	-	Charlie2a	DNA	hAT-Charlie	-2711	150	27	4
chr10	74242439	74242440	chunk0027_127_1	12.2633	AR_DHT_Control	chr10	74242331	74242454	-59554968	+	L2a	LINE	L2	3307	3422	-4	4
chr10	74389024	74389025	chunk0027_134_1	7.68007	AR_DHT_Control	chr10	74388836	74389158	-59408264	-	L1MEc	LINE	L1	-6027	373	37	4
chr10	74421417	74421418	chunk0027_136_1	13.7128	AR_DHT_Control	chr10	74420880	74422645	-59374777	+	L1MC3	LINE	L1	5987	7778	-7	4
chr10	74593566	74593567	chunk0027_142_1	40.9381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74593406	74593633	-59203789	-	L2b	LINE	L2	-236	3190	2944	4
chr10	74673557	74673558	chunk0027_145_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	74673343	74674202	-59123220	-	LTR1D1	LTR	ERV1	0	899	1	4
chr10	74688137	74688138	chunk0027_149_1	107.5049	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74687686	74688449	-59108973	+	L2a	LINE	L2	2542	3426	0	4
chr10	74778428	74778429	chunk0027_151_1	6.48643	AR_DHT_Control	chr10	74777651	74778494	-59018928	+	PRIMA41-int	LTR	ERV1	1171	2029	-5727	4
chr10	74786241	74786242	chunk0027_154_1	66.0889	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74786069	74786471	-59010951	-	MER57B2	LTR	ERV1	0	403	2	4
chr10	74823936	74823937	chunk0027_158_1	9.86811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	74823843	74824028	-58973394	-	MER131	DNA?	DNA?	0	215	40	4
chr10	74947513	74947514	chunk0027_167_1	44.1379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	74947490	74947532	-58849890	-	L2b	LINE	L2	0	3375	3334	4
chr10	74953399	74953400	chunk0027_168_1	21.6026	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	74953368	74953503	-58843919	-	MIRc	SINE	MIR	-17	251	113	4
chr10	74960788	74960789	chunk0027_171_1	372.0898	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	74960610	74960848	-58836574	+	MIRb	SINE	MIR	28	267	-1	4
chr10	75171577	75171578	chunk0027_182_1	15.80988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	75171466	75171742	-58625680	-	L1ME4a	LINE	L1	-236	5888	5596	4
chr10	75225651	75225652	chunk0027_184_1	13.042	AR_DHT_Control	chr10	75225280	75225775	-58571647	-	LTR23	LTR	ERV1	0	437	3	4
chr10	75519110	75519111	chunk0027_187_1	5.6425	AR_DHT_Control	chr10	75515700	75521837	-58275585	-	L1PA6	LINE	L1	0	6154	11	4
chr10	75589025	75589026	chunk0027_189_1	35.2916	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	75588632	75589458	-58207964	-	L1ME4b	LINE	L1	-4	888	43	4
chr10	75649519	75649520	chunk0027_193_1	15.9321	AR_DHT_Control	chr10	75649424	75650444	-58146978	-	L1MB3	LINE	L1	-327	5856	4801	4
chr10	76202223	76202224	chunk0027_219_1	29.44725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	76201784	76202266	-57595156	-	MLT1H2	LTR	ERVL-MaLR	-4	485	1	4
chr10	76206327	76206328	chunk0027_222_1	18.25048	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	76206178	76206571	-57590851	+	L2c	LINE	L2	2958	3387	0	4
chr10	76270125	76270126	chunk0027_225_1	74.70561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	76270040	76270525	-57526897	-	L2a	LINE	L2	-16	3410	2907	4
chr10	76491279	76491280	chunk0027_234_1	16.41969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	76490023	76492603	-57304819	-	L1M1	LINE	L1	-3227	4338	1678	4
chr10	76703424	76703425	chunk0027_236_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	76702610	76705964	-57091458	+	L1M1	LINE	L1	16	3421	-4144	4
chr10	77067046	77067047	chunk0027_243_1	8.94451	AR_DHT_Control	chr10	77067030	77067558	-56729864	+	MLT2B4	LTR	ERVL	1	556	0	4
chr10	77069208	77069209	chunk0027_244_1	50.88484	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	77068911	77069364	-56728058	+	CR1_Mam	LINE	CR1	492	972	-1232	4
chr10	77125509	77125510	chunk0027_248_1	8.13469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	77125220	77125799	-56671623	+	L2a	LINE	L2	2831	3426	0	4
chr10	77179250	77179251	chunk0027_253_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	77179084	77179303	-56618119	-	MIR	SINE	MIR	-9	259	9	4
chr10	77229807	77229808	chunk0027_256_1	6.64592	AR_DHT_Control	chr10	77229779	77230458	-56566964	+	L1MB5	LINE	L1	5480	6161	-13	4
chr10	77243217	77243218	chunk0027_259_1	69.0996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	77243187	77243222	-56554200	+	(CACCA)n	Simple_repeat	Simple_repeat	1	35	0	4
chr10	77268015	77268016	chunk0027_261_1	7.47918	AR_DHT_Control	chr10	77268007	77268102	-56529320	+	MER94	DNA	hAT-Blackjack	36	132	-2	4
chr10	77305897	77305898	chunk0027_264_1	85.5266	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	77305885	77305974	-56491448	-	UCON29	DNA	PiggyBac?	-34	405	316	4
chr10	77398713	77398714	chunk0027_271_1	6.17841	AR_DHT_Control	chr10	77398637	77398789	-56398633	+	MER58A	DNA	hAT-Charlie	51	221	-3	4
chr10	77486507	77486508	chunk0027_278_1	64.2484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	77486302	77486537	-56310885	+	MIR	SINE	MIR	22	262	0	4
chr10	77624694	77624695	chunk0027_295_1	5.95209	AR_DHT_Control	chr10	77624685	77624738	-56172684	-	MIRc	SINE	MIR	-132	136	80	4
chr10	77721107	77721108	chunk0027_299_1	10.179	AR_DHT_Control	chr10	77720922	77721109	-56076313	+	L1MEg	LINE	L1	747	941	-5301	4
chr10	78111463	78111464	chunk0027_316_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	78111374	78111601	-55685821	+	MLT1K	LTR	ERVL-MaLR	60	301	-294	4
chr10	78328234	78328235	chunk0027_325_1	6.98722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	78322203	78329277	-55468145	-	L1MA4A	LINE	L1	-34	7688	790	4
chr10	78383565	78383566	chunk0027_326_1	7.96057	AR_DHT_Control	chr10	78383443	78383638	-55413784	-	MER58A	DNA	hAT-Charlie	-10	214	1	4
chr10	78426351	78426352	chunk0027_328_1	85.0445	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	78426321	78426473	-55370949	-	MER63A	DNA	hAT-Blackjack	-45	165	1	4
chr10	78459161	78459162	chunk0027_330_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	78459061	78459247	-55338175	-	Charlie29a	DNA	hAT-Charlie	-279	440	257	4
chr10	78482086	78482087	chunk0027_332_1	153.64173	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr10	78481861	78483448	-55313974	-	L1MC	LINE	L1	-1767	4379	2844	4
chr10	78491764	78491765	chunk0027_335_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	78491089	78494898	-55302524	+	L1MD1	LINE	L1	721	4570	-2667	4
chr10	78513495	78513496	chunk0027_336_1	11.1604	AR_DHT_Control	chr10	78513419	78513560	-55283862	+	L3	LINE	CR1	3305	3449	-650	4
chr10	78571139	78571140	chunk0027_340_1	11.13837	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	78570238	78571244	-55226178	+	L2c	LINE	L2	2318	3378	-9	4
chr10	78589749	78589750	chunk0027_343_1	156.232	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	78589680	78590136	-55207286	+	LTR40a	LTR	ERVL	1	465	-54	4
chr10	78605307	78605308	chunk0027_346_1	71.19464	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	78605179	78605473	-55191949	+	Tigger3b	DNA	TcMar-Tigger	13	311	-920	4
chr10	78649637	78649638	chunk0027_349_1	113.6765	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	78649609	78649786	-55147636	-	L2b	LINE	L2	-30	3357	3183	4
chr10	78657880	78657881	chunk0027_350_1	4.73472	AR_DHT_Control	chr10	78657802	78657952	-55139470	+	MIR3	SINE	MIR	39	201	-7	4
chr10	78672846	78672847	chunk0027_351_1	12.1886	AR_DHT_Control	chr10	78672577	78672979	-55124443	+	L1PA11	LINE	L1	5769	6174	0	4
chr10	78742886	78742887	chunk0027_353_1	361.5791	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	78742815	78742918	-55054504	+	L2c	LINE	L2	3281	3386	-1	4
chr10	78933351	78933352	chunk0027_356_1	4.06191	AR_DHT_Control	chr10	78933336	78933416	-54864006	+	L2	LINE	L2	2353	2433	-986	4
chr10	78973541	78973542	chunk0027_358_1	6.9063	AR_DHT_Control	chr10	78973518	78973547	-54823875	+	(CAGCC)n	Simple_repeat	Simple_repeat	1	29	0	4
chr10	78995718	78995719	chunk0027_360_1	37.75961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	78995675	78995896	-54801526	-	MIRc	SINE	MIR	-28	240	1	4
chr10	79016016	79016017	chunk0027_362_1	97.8252	AR_DHT_Control	chr10	79015887	79016168	-54781254	-	L2b	LINE	L2	-1	3374	3082	4
chr10	79329736	79329737	chunk0027_372_1	27.8131	AR_DHT_Control	chr10	79329685	79329786	-54467636	-	L2c	LINE	L2	-245	3142	3030	4
chr10	79556095	79556096	chunk0027_380_1	25.7131	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	79555921	79556155	-54241267	+	MIR	SINE	MIR	14	249	-13	4
chr10	79571268	79571269	chunk0027_382_1	7.36432	AR_DHT_Control	chr10	79570393	79576489	-54220933	+	L1PA6	LINE	L1	5	6153	-1	4
chr10	79605102	79605103	chunk0027_383_1	7.33982	AR_DHT_Control	chr10	79604152	79605443	-54191979	-	MER52-int	LTR	ERV1	-494	6597	5253	4
chr10	79615191	79615192	chunk0027_385_1	21.38964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	79615150	79615394	-54182028	-	MIRb	SINE	MIR	-13	255	4	4
chr10	79726818	79726819	chunk0027_386_1	12.1886	AR_DHT_Control	chr10	79726591	79726875	-54070547	+	Tigger3c	DNA	TcMar-Tigger	305	600	-2	4
chr10	79884707	79884708	chunk0027_387_1	10.0059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	79884512	79884763	-53912659	+	L1MA9	LINE	L1	6040	6312	0	4
chr10	79970225	79970226	chunk0027_391_1	6.48643	AR_DHT_Control	chr10	79969530	79971962	-53825460	-	L1M2	LINE	L1	-767	6240	2148	4
chr10	79996521	79996522	chunk0027_392_1	3.93339	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	79995536	79997000	-53800422	-	L1PA14	LINE	L1	-5256	1437	5	4
chr10	80212942	80212943	chunk0027_396_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80212696	80212950	-53584472	-	MIR	SINE	MIR	0	262	32	4
chr10	80386223	80386224	chunk0027_400_1	26.7525	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80385803	80386272	-53411150	-	L1MCb	LINE	L1	-1612	4952	4476	4
chr10	80468788	80468789	chunk0027_409_1	6.60763	AR_DHT_Control	chr10	80468709	80468858	-53328564	-	AluJb	SINE	Alu	-3	309	137	4
chr10	80610264	80610265	chunk0027_412_1	43.5508	AR_DHT_Control	chr10	80610027	80610375	-53187047	+	L2a	LINE	L2	2961	3345	-81	4
chr10	80625111	80625112	chunk0027_415_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80624936	80625158	-53172264	-	L1ME3E	LINE	L1	-111	6131	5877	4
chr10	80647484	80647485	chunk0027_417_1	15.25727	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80647395	80647621	-53149801	+	MER58B	DNA	hAT-Charlie	1	232	-109	4
chr10	80783891	80783892	chunk0027_420_1	12.26455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	80783888	80783909	-53013513	+	(GT)n	Simple_repeat	Simple_repeat	1	21	0	4
chr10	80850660	80850661	chunk0027_423_1	239.9505	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80850447	80850954	-52946468	-	Arthur1	DNA	hAT-Tip100	-1247	2700	2170	4
chr10	80923643	80923644	chunk0027_427_1	5.69226	AR_DHT_Control	chr10	80923432	80923657	-52873765	-	MER58A	DNA	hAT-Charlie	0	224	2	4
chr10	80946921	80946922	chunk0027_429_1	38.021	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	80946608	80947008	-52850414	+	MER34C	LTR	ERV1	129	538	-13	4
chr10	80966541	80966542	chunk0027_430_1	8.41215	AR_DHT_Control	chr10	80966330	80966659	-52830763	+	L1ME3A	LINE	L1	18	352	-5883	4
chr10	80988939	80988940	chunk0027_431_1	4.93619	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	80988836	80989045	-52808377	-	MER58A	DNA	hAT-Charlie	-1	223	22	4
chr10	80996926	80996927	chunk0027_432_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	80994707	80997057	-52800365	-	L1PB1	LINE	L1	-3629	3233	844	4
chr10	81008013	81008014	chunk0027_434_1	13.44113	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	81007894	81008025	-52789397	-	MLT1J-int	LTR	ERVL-MaLR	-1081	306	176	4
chr10	81079559	81079560	chunk0027_440_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	81076425	81081604	-52715818	-	L1PA15	LINE	L1	-8	8152	3011	4
chr10	81190042	81190043	chunk0027_442_1	15.19409	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	81190036	81190189	-52607233	+	L2a	LINE	L2	3273	3425	-1	4
chr10	81192675	81192676	chunk0027_444_1	27.86623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	81192444	81193036	-52604386	+	MER4B-int	LTR	ERV1	686	1238	-5520	4
chr10	81193652	81193653	chunk0027_446_1	11.3024	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	81193336	81193763	-52603659	+	MER4B-int	LTR	ERV1	956	1426	-5332	4
chr10	81286674	81286675	chunk0027_451_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	81286247	81287718	-52509704	+	L1PA15	LINE	L1	9	1561	-5128	4
chr10	81305347	81305348	chunk0027_452_1	44.0942	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	81304325	81305787	-52491635	+	L1MC5	LINE	L1	7464	8963	-341	4
chr10	81314777	81314778	chunk0027_453_1	79.1804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	81314710	81314839	-52482583	-	L2	LINE	L2	-457	2962	2831	4
chr10	81601318	81601319	chunk0027_456_1	10.1791	AR_DHT_Control	chr10	81601163	81601488	-52195934	+	LTR104_Mam	LTR	Gypsy	51	366	-1143	4
chr10	81749795	81749796	chunk0027_457_1	8.41215	AR_DHT_Control	chr10	81749781	81750198	-52047224	-	L1ME3Cz	LINE	L1	-1270	4876	4399	4
chr10	81814607	81814608	chunk0027_460_1	30.5192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	81813786	81814738	-51982684	+	L1MD	LINE	L1	4658	5640	-602	4
chr10	82455399	82455400	chunk0028_16_1	25.3521	AR_DHT_Control	chr10	82455188	82455614	-51341808	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	785	4
chr10	82463749	82463750	chunk0028_18_1	117.2268	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	82463675	82463757	-51333665	-	MIRb	SINE	MIR	-151	117	30	4
chr10	82549023	82549024	chunk0028_23_1	13.4307	AR_DHT_Control	chr10	82549010	82549231	-51248191	+	MIRb	SINE	MIR	9	247	-21	4
chr10	82871408	82871409	chunk0028_33_1	105.91602	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	82870167	82872270	-50925152	-	L1MC1	LINE	L1	-359	5974	3790	4
chr10	82928742	82928743	chunk0028_38_1	12.03294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	82928647	82928809	-50868613	-	MER58A	DNA	hAT-Charlie	-31	193	4	4
chr10	83112105	83112106	chunk0028_42_1	14.1981	AR_DHT_Control	chr10	83108490	83114917	-50682505	+	L1PA13	LINE	L1	240	6780	-3	4
chr10	83172870	83172871	chunk0028_45_1	8.7059	AR_DHT_Control	chr10	83172345	83172924	-50624498	-	L1MA1	LINE	L1	0	6302	5737	4
chr10	83183342	83183343	chunk0028_46_1	7.42871	AR_DHT_Control	chr10	83183045	83183431	-50613991	+	L2	LINE	L2	2321	2705	-714	4
chr10	83195259	83195260	chunk0028_50_1	100.12196	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83195128	83195479	-50601943	-	L1MC3	LINE	L1	-1266	6694	6324	4
chr10	83207208	83207209	chunk0028_51_1	4.63256	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83206906	83207494	-50589928	+	L1PREC2	LINE	L1	4836	5361	-785	4
chr10	83221457	83221458	chunk0028_52_1	41.21731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83219152	83223063	-50574359	-	MER52-int	LTR	ERV1	-2906	4185	77	4
chr10	83222461	83222462	chunk0028_54_1	7.92257	AR_DHT_Control	chr10	83219152	83223063	-50574359	-	MER52-int	LTR	ERV1	-2906	4185	77	4
chr10	83226139	83226140	chunk0028_55_1	5.28628	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83225849	83226174	-50571248	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	4
chr10	83330861	83330862	chunk0028_62_1	28.35748	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83329951	83331124	-50466298	-	L1MB7	LINE	L1	-5628	1239	22	4
chr10	83580338	83580339	chunk0028_66_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	83579749	83581408	-50216014	-	L1PA16	LINE	L1	-5666	2495	832	4
chr10	83653067	83653068	chunk0028_68_1	17.29229	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	83653004	83653115	-50144307	-	L1M3f	LINE	L1	-5214	114	1	4
chr10	83677877	83677878	chunk0028_69_1	15.84528	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	83677777	83678272	-50119150	-	LTR41	LTR	ERVL	-240	528	8	4
chr10	83700633	83700634	chunk0028_72_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83700620	83700700	-50096722	-	LTR81A	LTR	Gypsy	-222	1128	1046	4
chr10	83790533	83790534	chunk0028_76_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	83789395	83790951	-50006471	-	L1PB4	LINE	L1	-4362	2491	1171	4
chr10	83809185	83809186	chunk0028_78_1	26.94565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	83808972	83809250	-49988172	+	L2c	LINE	L2	3108	3387	0	4
chr10	83853729	83853730	chunk0028_82_1	20.9326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	83853576	83854558	-49942864	+	L1PA17	LINE	L1	5171	6163	-3	4
chr10	83884291	83884292	chunk0028_88_1	46.224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	83884228	83884681	-49912741	-	L1MEd	LINE	L1	-1458	4688	4156	4
chr10	84039404	84039405	chunk0028_93_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	84039346	84039909	-49757513	-	MER4D1	LTR	ERV1	0	900	330	4
chr10	84108220	84108221	chunk0028_94_1	7.36432	AR_DHT_Control	chr10	84108194	84108444	-49688978	-	PABL_B	LTR	ERV1	-1	666	419	4
chr10	84288014	84288015	chunk0028_99_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	84287573	84288060	-49509362	-	L2	LINE	L2	-2083	1336	816	4
chr10	84317909	84317910	chunk0028_102_1	17.93872	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	84316857	84318322	-49479100	+	L1M5	LINE	L1	2984	4551	-1592	4
chr10	84441486	84441487	chunk0028_113_1	42.5501	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	84440531	84441558	-49355864	-	HAL1	LINE	L1	-617	1890	831	4
chr10	84460649	84460650	chunk0028_114_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	84460389	84462345	-49335077	-	L1ME1	LINE	L1	-2399	4389	824	4
chr10	84633039	84633040	chunk0028_120_1	56.241	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	84632907	84633477	-49163945	+	MER41C	LTR	ERV1	1	521	0	4
chr10	84711199	84711200	chunk0028_124_1	77.3744	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	84711064	84711490	-49085932	-	HAL1	LINE	L1	-1514	993	532	4
chr10	85231571	85231572	chunk0028_131_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	85231388	85231614	-48565808	+	MIRb	SINE	MIR	17	241	-27	4
chr10	85381793	85381794	chunk0028_132_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	85381765	85382399	-48415023	-	L1MEc	LINE	L1	-4198	2202	1501	4
chr10	86361708	86361709	chunk0028_137_1	9.83323	AR_DHT_Control	chr10	86361629	86361926	-47435496	+	MER102b	DNA	hAT-Charlie	20	309	-32	4
chr10	86630653	86630654	chunk0028_141_1	11.1716	AR_DHT_Control	chr10	86630598	86630762	-47166660	-	L1M5	LINE	L1	-1233	4913	4747	4
chr10	86738207	86738208	chunk0028_147_1	36.0015	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	86738058	86738375	-47059047	+	MLT1K	LTR	ERVL-MaLR	206	518	-77	5
chr10	86779287	86779288	chunk0028_150_1	20.26438	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	86779069	86779407	-47018015	-	L1MA5A	LINE	L1	-468	5829	5484	5
chr10	87163273	87163274	chunk0028_165_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	87162670	87163412	-46634010	+	L1MC4a	LINE	L1	5302	6098	-1784	5
chr10	87648173	87648174	chunk0028_171_1	96.01533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	87647950	87648941	-46148481	-	L1MC4a	LINE	L1	-271	7611	6587	5
chr10	87854332	87854333	chunk0028_174_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	87854098	87854600	-45942822	+	MLT1H-int	LTR	ERVL-MaLR	100	653	-756	5
chr10	88115113	88115114	chunk0028_176_1	33.5787	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	88114735	88115166	-45682256	+	L2a	LINE	L2	2969	3426	0	5
chr10	88440005	88440006	chunk0028_182_1	20.56435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	88439826	88440128	-45357294	+	L2c	LINE	L2	3053	3379	-8	5
chr10	88449263	88449264	chunk0028_184_1	10.1791	AR_DHT_Control	chr10	88449236	88449632	-45347790	+	L2c	LINE	L2	2938	3387	0	5
chr10	88856131	88856132	chunk0028_196_1	7.17788	AR_DHT_Control	chr10	88856083	88856543	-44940879	+	LTR47B3	LTR	ERVL	1	463	-1	5
chr10	89131485	89131486	chunk0028_203_1	57.4998	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	89131127	89131787	-44665635	+	L1MC1	LINE	L1	5319	5964	-369	5
chr10	89132898	89132899	chunk0028_205_1	10.35	AR_DHT_Control	chr10	89132796	89133089	-44664333	+	MER110A	LTR	ERV1	44	341	-127	5
chr10	89141549	89141550	chunk0028_207_1	46.921	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89141511	89141605	-44655817	-	MIRb	SINE	MIR	-22	246	153	5
chr10	89251189	89251190	chunk0028_208_1	4.83532	AR_DHT_Control	chr10	89251113	89251326	-44546096	-	MIR	SINE	MIR	-18	244	14	5
chr10	89445518	89445519	chunk0028_213_1	14.9059	AR_DHT_Control	chr10	89444635	89450769	-44346653	+	L1PA6	LINE	L1	5	6154	0	5
chr10	89550777	89550778	chunk0028_217_1	6.38514	AR_DHT_Control	chr10	89550530	89551014	-44246408	+	L2b	LINE	L2	2812	3374	-1	5
chr10	89564405	89564406	chunk0028_219_1	8.62865	AR_DHT_Control	chr10	89564111	89564442	-44232980	+	L1MB5	LINE	L1	5801	6129	-45	5
chr10	89589252	89589253	chunk0028_220_1	15.2076	AR_DHT_Control	chr10	89589222	89589282	-44208140	-	L2b	LINE	L2	-46	3329	3266	5
chr10	89617691	89617692	chunk0028_222_1	47.8551	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89617223	89618567	-44178855	+	MLT1I-int	LTR	ERVL-MaLR	16	1384	-3	5
chr10	89628149	89628150	chunk0028_223_1	76.7424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89627890	89628686	-44168736	+	L1MB8	LINE	L1	5356	6163	-15	5
chr10	89774854	89774855	chunk0028_228_1	9.01771	AR_DHT_Control	chr10	89774547	89782068	-44015354	-	L1MA1	LINE	L1	-7	7714	12	5
chr10	89895329	89895330	chunk0028_233_1	18.23563	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89894690	89897875	-43899547	-	L1PBb	LINE	L1	-2963	3952	713	5
chr10	89908415	89908416	chunk0028_235_1	19.88381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	89905789	89908834	-43888588	-	L1PA13	LINE	L1	0	6783	3697	5
chr10	89911299	89911300	chunk0028_236_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	89908832	89911557	-43885865	-	L1PA13	LINE	L1	-3429	3337	579	5
chr10	90020635	90020636	chunk0028_238_1	7.00991	AR_DHT_Control	chr10	90020545	90021675	-43775747	-	Tigger3b	DNA	TcMar-Tigger	-5	1226	68	5
chr10	90025147	90025148	chunk0028_240_1	42.9822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	90025147	90026107	-43771315	+	L1MC4	LINE	L1	636	1537	-4678	5
chr10	90074011	90074012	chunk0028_241_1	7.36432	AR_DHT_Control	chr10	90072229	90077090	-43720332	-	L1MA3	LINE	L1	-2228	4923	7	5
chr10	90233948	90233949	chunk0028_243_1	5.81492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	90229539	90234625	-43562797	+	L1PB1	LINE	L1	1297	6497	-370	5
chr10	90289894	90289895	chunk0028_244_1	4.89968	AR_DHT_Control	chr10	90289883	90289928	-43507494	+	(AC)n	Simple_repeat	Simple_repeat	1	45	0	5
chr10	90293997	90293998	chunk0028_245_1	17.22865	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	90293718	90294055	-43503367	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	5
chr10	90481028	90481029	chunk0028_249_1	7.36432	AR_DHT_Control	chr10	90480891	90481037	-43316385	+	L3	LINE	CR1	3553	3697	-402	5
chr10	90550816	90550817	chunk0028_250_1	29.69974	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	90546075	90551641	-43245781	+	HERVL-int	LTR	ERVL	1	5654	0	5
chr10	90580309	90580310	chunk0028_253_1	126.8289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	90579633	90580506	-43216916	+	MER54A	LTR	ERVL	1	899	-2	5
chr10	90589953	90589954	chunk0028_257_1	34.8543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	90589940	90590120	-43207302	-	MER117	DNA	hAT-Charlie	-1	196	2	5
chr10	90749782	90749783	chunk0028_260_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	90749680	90749847	-43047575	-	MIRb	SINE	MIR	-79	189	18	5
chr10	90847131	90847132	chunk0028_261_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	90847109	90847308	-42950114	+	MIRc	SINE	MIR	60	268	0	5
chr10	90946221	90946222	chunk0028_273_1	26.00162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	90945956	90946265	-42851157	+	MER58B	DNA	hAT-Charlie	27	340	-1	5
chr10	91023592	91023593	chunk0028_277_1	124.6034	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91023556	91023736	-42773686	-	MamGypsy2-LTR	LTR	Gypsy	0	183	1	5
chr10	91034707	91034708	chunk0028_279_1	17.58272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	91034346	91034871	-42762551	+	L1MC1	LINE	L1	5817	6333	0	5
chr10	91341575	91341576	chunk0028_285_1	6.54035	AR_DHT_Control	chr10	91341346	91342118	-42455304	+	LTR39	LTR	ERV1	1	783	0	5
chr10	91433513	91433514	chunk0028_289_1	16.4118	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91433239	91433740	-42363682	-	L1ME4b	LINE	L1	-1886	891	350	5
chr10	91467686	91467687	chunk0028_292_1	8.73763	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	91466935	91468754	-42328668	+	L1PA13	LINE	L1	13	2048	-4718	5
chr10	91490325	91490326	chunk0028_293_1	14.90946	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	91490255	91490453	-42306969	-	L1ME4c	LINE	L1	-300	530	319	5
chr10	91527733	91527734	chunk0028_295_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91527647	91527791	-42269631	+	L1ME3G	LINE	L1	556	708	-216	5
chr10	91591538	91591539	chunk0028_301_1	6.21736	AR_DHT_Control	chr10	91591231	91591655	-42205767	+	L2c	LINE	L2	2923	3383	-4	5
chr10	91688971	91688972	chunk0028_307_1	9.50654	AR_DHT_Control	chr10	91688697	91689312	-42108110	+	L1PA16	LINE	L1	5504	6112	-54	5
chr10	91690628	91690629	chunk0028_308_1	64.0946	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91690593	91690669	-42106753	-	MLT1I	LTR	ERVL-MaLR	-263	148	73	5
chr10	91740535	91740536	chunk0028_311_1	8.11543	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	91737875	91741030	-42056392	-	L1PA15	LINE	L1	-743	3634	448	5
chr10	91788667	91788668	chunk0028_314_1	12.78665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	91787131	91790118	-42007304	+	L1MA3	LINE	L1	16	3045	-4520	5
chr10	91804305	91804306	chunk0028_317_1	112.2299	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	91804216	91804314	-41993108	-	L2a	LINE	L2	-3	3423	3320	5
chr10	91881619	91881620	chunk0028_320_1	6.40219	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	91881104	91881696	-41915726	-	L2a	LINE	L2	0	3426	2786	5
chr10	91891556	91891557	chunk0028_321_1	48.9013	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91891510	91891565	-41905857	+	(TTGTT)n	Simple_repeat	Simple_repeat	1	57	0	5
chr10	91968627	91968628	chunk0028_323_1	29.81266	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	91967873	91968868	-41828554	-	L1MC2	LINE	L1	-14	6330	5323	5
chr10	91977406	91977407	chunk0028_327_1	20.0638	AR_DHT_Control	chr10	91977290	91977850	-41819572	-	L1MC1	LINE	L1	-377	5956	5370	5
chr10	92014794	92014795	chunk0028_329_1	10.0576	AR_DHT_Control	chr10	92014770	92015041	-41782381	-	Tigger3a	DNA	TcMar-Tigger	-31	317	2	5
chr10	92117910	92117911	chunk0028_337_1	19.78859	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92117796	92118022	-41679400	-	MIR	SINE	MIR	-4	258	26	5
chr10	92122252	92122253	chunk0028_338_1	39.27185	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	92122020	92122406	-41675016	-	L2c	LINE	L2	-15	3372	2941	5
chr10	92148320	92148321	chunk0028_341_1	5.85263	AR_DHT_Control	chr10	92147826	92148673	-41648749	+	L2c	LINE	L2	2453	3371	-16	5
chr10	92151850	92151851	chunk0028_342_1	6.98722	AR_DHT_Control	chr10	92151594	92152210	-41645212	+	L2a	LINE	L2	2401	3044	-375	5
chr10	92181801	92181802	chunk0028_343_1	9.85287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92181640	92181842	-41615580	+	MER58C	DNA	hAT-Charlie	1	215	0	5
chr10	92267222	92267223	chunk0028_349_1	28.0146	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92267180	92267356	-41530066	-	MER58C	DNA	hAT-Charlie	-2	213	27	5
chr10	92444554	92444555	chunk0028_354_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92444506	92444607	-41352815	-	L1ME1	LINE	L1	-125	6054	5938	5
chr10	92731592	92731593	chunk0028_365_1	164.4322	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92731466	92731623	-41065799	+	L2b	LINE	L2	3213	3375	0	5
chr10	92758767	92758768	chunk0028_370_1	75.56912	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	92758568	92759114	-41038308	-	L1ME4b	LINE	L1	-237	655	68	5
chr10	92825643	92825644	chunk0028_373_1	38.989	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92825582	92825677	-40971745	-	L2a	LINE	L2	-2	3424	3321	5
chr10	92826648	92826649	chunk0028_375_1	28.56306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	92826510	92827023	-40970399	-	L2a	LINE	L2	0	3426	2890	5
chr10	92849922	92849923	chunk0028_376_1	8.01864	AR_DHT_Control	chr10	92849877	92849957	-40947465	+	L2c	LINE	L2	3305	3381	-6	5
chr10	92889627	92889628	chunk0028_379_1	12.34373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92889503	92889745	-40907677	-	L1MC1	LINE	L1	-1196	4950	4699	5
chr10	92892546	92892547	chunk0028_381_1	37.01775	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	92892115	92892674	-40904748	-	MER77	LTR	ERVL	-10	594	60	5
chr10	92902667	92902668	chunk0028_384_1	24.4542	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	92902614	92902708	-40894714	-	L1ME3A	LINE	L1	-83	6090	5992	5
chr10	92903851	92903852	chunk0028_385_1	119.0923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	92903637	92905466	-40891956	-	L1MC2	LINE	L1	-11	7128	5262	5
chr10	92945253	92945254	chunk0028_389_1	8.57499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	92945071	92945464	-40851958	-	L1MA7	LINE	L1	-858	5433	5054	5
chr10	92990627	92990628	chunk0028_392_1	177.4785	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	92990620	92990785	-40806637	-	L1PA10	LINE	L1	-3	6165	5999	5
chr10	93244750	93244751	chunk0028_400_1	12.3208	AR_DHT_Control	chr10	93244635	93244756	-40552666	+	L2c	LINE	L2	3250	3386	-1	5
chr10	93254404	93254405	chunk0028_402_1	55.4616	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	93254314	93254431	-40542991	+	LTR88a	LTR	Gypsy?	280	396	-420	5
chr10	93261363	93261364	chunk0028_405_1	26.6958	AR_DHT_Control	chr10	93261359	93261427	-40535995	+	GA-rich	Low_complexity	Low_complexity	1	64	0	5
chr10	93398465	93398466	chunk0028_409_1	55.75639	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	93398117	93398522	-40398900	+	L2a	LINE	L2	2919	3386	-1	5
chr10	93435315	93435316	chunk0028_415_1	28.42546	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	93435311	93435473	-40361949	-	MER20	DNA	hAT-Charlie	0	219	2	5
chr10	93444407	93444408	chunk0028_417_1	65.97012	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	93444246	93444431	-40352991	-	L2a	LINE	L2	0	3426	3215	5
chr10	93745127	93745128	chunk0028_429_1	27.80329	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	93745062	93745140	-40052282	+	L2a	LINE	L2	3338	3425	-1	5
chr10	94076086	94076087	chunk0028_445_1	55.423	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	94075881	94076103	-39721319	-	MIRb	SINE	MIR	-2	260	30	5
chr10	94129430	94129431	chunk0028_447_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	94129309	94129537	-39667885	+	MER103C	DNA	hAT-Charlie	55	297	0	5
chr10	94482843	94482844	chunk0028_451_1	91.4491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	94482749	94483029	-39314393	-	L1MA2	LINE	L1	-244	7479	7195	5
chr10	94489254	94489255	chunk0028_452_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	94488690	94489598	-39307824	-	L1MA2	LINE	L1	-6649	916	17	5
chr10	94778216	94778217	chunk0028_454_1	14.2911	AR_DHT_Control	chr10	94777980	94778431	-39018991	-	LTR22A	LTR	ERVK	0	458	1	5
chr10	94784347	94784348	chunk0028_456_1	17.6003	AR_DHT_Control	chr10	94783894	94784606	-39012816	-	L1MB5	LINE	L1	0	6174	5443	5
chr10	95133314	95133315	chunk0028_457_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	95132810	95133902	-38663520	-	HUERS-P3-int	LTR	ERV1	-6351	1067	23	5
chr10	95172256	95172257	chunk0028_458_1	6.48643	AR_DHT_Control	chr10	95172067	95172312	-38625110	+	MIRb	SINE	MIR	4	259	-9	5
chr10	95181885	95181886	chunk0028_460_1	22.4363	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	95181623	95182018	-38615404	+	MER101-int	LTR	ERV1	2756	3132	-3507	5
chr10	95273800	95273801	chunk0029_1_1	82.4843	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	95273549	95273887	-38523535	+	L4_C_Mam	LINE	RTE-X	1635	1978	-3160	5
chr10	95300436	95300437	chunk0029_5_1	7.92341	AR_DHT_Control	chr10	95300418	95300680	-38496742	+	L1MC4	LINE	L1	7350	7623	-419	5
chr10	95360547	95360548	chunk0029_9_1	38.67296	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	95360360	95360750	-38436672	+	MER57C2	LTR	ERV1	9	434	0	5
chr10	95405819	95405820	chunk0029_11_1	11.8854	AR_DHT_Control	chr10	95405770	95406046	-38391376	+	L2a	LINE	L2	3129	3422	-4	5
chr10	95524915	95524916	chunk0029_17_1	16.4902	AR_DHT_Control	chr10	95524877	95525089	-38272333	+	Plat_L3	LINE	CR1	2570	2776	-810	5
chr10	95550307	95550308	chunk0029_20_1	6.01382	AR_DHT_Control	chr10	95550270	95550328	-38247094	+	MIRb	SINE	MIR	188	249	-19	5
chr10	95558947	95558948	chunk0029_21_1	5.06979	AR_DHT_Control	chr10	95558864	95559030	-38238392	-	MIR3	SINE	MIR	-15	193	17	5
chr10	95561880	95561881	chunk0029_22_1	6.8205	AR_DHT_Control	chr10	95561763	95561918	-38235504	+	MIR	SINE	MIR	94	261	-1	5
chr10	95794765	95794766	chunk0029_26_1	8.02791	AR_DHT_Control	chr10	95794610	95795577	-38001845	-	L2b	LINE	L2	-119	3256	2287	5
chr10	96073215	96073216	chunk0029_32_1	32.92352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	96073004	96073327	-37724095	-	L1ME2	LINE	L1	-3	6161	5841	5
chr10	96124507	96124508	chunk0029_34_1	6.48643	AR_DHT_Control	chr10	96124231	96125093	-37672329	-	L1M4c	LINE	L1	-5493	2074	1186	5
chr10	96381970	96381971	chunk0029_48_1	149.9636	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	96381893	96381999	-37415423	-	L2c	LINE	L2	-10	3377	3269	5
chr10	96423993	96423994	chunk0029_53_1	33.68154	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	96423792	96424465	-37372957	+	L1MA2	LINE	L1	5647	6303	-1	5
chr10	96532633	96532634	chunk0029_58_1	30.2462	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	96532592	96532767	-37264655	-	MER58A	DNA	hAT-Charlie	-32	192	22	5
chr10	96568484	96568485	chunk0029_63_1	52.14247	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	96568443	96568761	-37228661	+	L3	LINE	CR1	2692	3027	-1072	5
chr10	96671071	96671072	chunk0029_72_1	40.7394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	96670880	96671113	-37126309	-	MamRep434	DNA	TcMar-Tigger	-99	327	104	5
chr10	96710702	96710703	chunk0029_75_1	6.13982	AR_DHT_Control	chr10	96710630	96710881	-37086541	-	MIR	SINE	MIR	0	268	26	5
chr10	96712270	96712271	chunk0029_76_1	20.0022	AR_DHT_Control	chr10	96712264	96712465	-37084957	+	Tigger10	DNA	TcMar-Tigger	546	797	-1047	5
chr10	96719502	96719503	chunk0029_77_1	149.4471	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	96719485	96719592	-37077830	+	L2c	LINE	L2	3249	3365	-22	5
chr10	96843151	96843152	chunk0029_79_1	12.9925	AR_DHT_Control	chr10	96843125	96843417	-36954005	-	AluJr4	SINE	Alu	-13	299	16	5
chr10	96903186	96903187	chunk0029_84_1	39.0803	AR_DHT_Control	chr10	96902823	96903416	-36894006	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	5
chr10	97337146	97337147	chunk0029_96_1	37.52276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	97337090	97337311	-36460111	+	MIRc	SINE	MIR	13	260	-8	5
chr10	97344678	97344679	chunk0029_98_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	97344399	97345030	-36452392	+	L2a	LINE	L2	2182	2856	-563	5
chr10	97407837	97407838	chunk0029_99_1	8.82835	AR_DHT_Control	chr10	97407802	97408040	-36389382	+	MIRb	SINE	MIR	29	267	-1	5
chr10	97596852	97596853	chunk0029_104_1	56.4179	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	97596832	97597094	-36200328	+	L4_A_Mam	LINE	RTE-X	4608	4877	-113	5
chr10	97963551	97963552	chunk0029_112_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	97963530	97963595	-35833827	+	L2b	LINE	L2	3309	3375	0	5
chr10	97989359	97989360	chunk0029_113_1	6.98475	AR_DHT_Control	chr10	97989293	97989644	-35807778	-	Tigger3a	DNA	TcMar-Tigger	-1	347	5	5
chr10	98159555	98159556	chunk0029_114_1	17.8376	AR_DHT_Control	chr10	98159401	98160261	-35637161	-	L1MC4a	LINE	L1	-715	7327	6307	5
chr10	98502737	98502738	chunk0029_121_1	30.5304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	98500000	98502929	-35294493	+	L1PB1	LINE	L1	2466	5400	-746	5
chr10	98536841	98536842	chunk0029_125_1	8.21385	AR_DHT_Control	chr10	98536836	98537096	-35260326	-	L2a	LINE	L2	-407	3012	2740	5
chr10	98558333	98558334	chunk0029_126_1	15.5106	AR_DHT_Control	chr10	98557914	98558747	-35238675	+	L1ME3A	LINE	L1	5194	6138	-35	5
chr10	98582152	98582153	chunk0029_127_1	6.86162	AR_DHT_Control	chr10	98581609	98582484	-35214938	+	MER97a	DNA	hAT-Tip100	3	886	-4	5
chr10	98586881	98586882	chunk0029_128_1	7.20445	AR_DHT_Control	chr10	98586861	98587053	-35210369	+	MIRb	SINE	MIR	16	222	-46	5
chr10	98653110	98653111	chunk0029_131_1	23.6465	AR_DHT_Control	chr10	98653008	98655288	-35142134	-	L1MCa	LINE	L1	-3644	2920	398	5
chr10	98900251	98900252	chunk0029_132_1	30.44202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	98900015	98900470	-34896952	+	L1ME1	LINE	L1	5579	6046	-133	5
chr10	99042601	99042602	chunk0029_134_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	99041170	99043202	-34754220	+	L1PA16	LINE	L1	829	3129	-5032	5
chr10	99266771	99266772	chunk0029_138_1	10.1791	AR_DHT_Control	chr10	99265616	99267502	-34529920	+	L1PB1	LINE	L1	258	2145	-4718	5
chr10	99292367	99292368	chunk0029_139_1	5.89231	AR_DHT_Control	chr10	99292296	99292443	-34504979	-	L2a	LINE	L2	0	3426	3279	5
chr10	99395161	99395162	chunk0029_147_1	16.54839	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	99395056	99395222	-34402200	-	MIRb	SINE	MIR	0	268	66	5
chr10	99396001	99396002	chunk0029_150_1	101.137	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	99395922	99396156	-34401266	+	L3	LINE	CR1	3663	3904	-195	5
chr10	99443853	99443854	chunk0029_155_1	45.02439	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	99443578	99444060	-34353362	+	L1ME3G	LINE	L1	358	907	-17	5
chr10	99647608	99647609	chunk0029_157_1	9.21264	AR_DHT_Control	chr10	99646693	99648007	-34149415	-	L1PB4	LINE	L1	-21	6135	4800	5
chr10	99810323	99810324	chunk0029_160_1	31.06634	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	99810255	99810381	-33987041	+	MamRep1879	DNA	hAT-Tip100?	1	134	-82	5
chr10	99945522	99945523	chunk0029_168_1	23.67224	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	99945108	99945739	-33851683	-	MER99	DNA	hAT?	-3	828	196	5
chr10	100420731	100420732	chunk0029_173_1	8.27376	AR_DHT_Control	chr10	100420690	100420821	-33376601	+	L2a	LINE	L2	3276	3416	-10	5
chr10	100442769	100442770	chunk0029_174_1	17.6003	AR_DHT_Control	chr10	100442621	100443095	-33354327	+	L2a	LINE	L2	2899	3426	0	5
chr10	100636626	100636627	chunk0029_175_1	11.1716	AR_DHT_Control	chr10	100636519	100636746	-33160676	+	MIR	SINE	MIR	2	241	-21	5
chr10	101377195	101377196	chunk0029_190_1	13.2288	AR_DHT_Control	chr10	101376939	101377624	-32419798	-	L1ME1	LINE	L1	-27	6152	5409	5
chr10	101694348	101694349	chunk0029_203_1	5.14476	AR_DHT_Control	chr10	101694327	101694375	-32103047	+	G-rich	Low_complexity	Low_complexity	1	51	0	5
chr10	101821347	101821348	chunk0029_206_1	11.7009	AR_DHT_Control	chr10	101821244	101821584	-31975838	+	LTR56	LTR	ERV1	78	445	0	5
chr10	101868165	101868166	chunk0029_208_1	47.9985	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	101867847	101868789	-31928633	+	Tigger2	DNA	TcMar-Tigger	1788	2591	-127	5
chr10	101906221	101906222	chunk0029_210_1	19.47762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	101905928	101906382	-31891040	-	L1ME3Cz	LINE	L1	-237	760	274	5
chr10	102302849	102302850	chunk0029_224_1	7.36432	AR_DHT_Control	chr10	102302700	102302913	-31494509	+	MER20	DNA	hAT-Charlie	1	219	0	5
chr10	102477830	102477831	chunk0029_229_1	122.1827	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	102477778	102477954	-31319468	-	MER20	DNA	hAT-Charlie	-5	214	1	5
chr10	102658637	102658638	chunk0029_243_1	39.23345	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	102658633	102658701	-31138721	-	L2a	LINE	L2	-2	3424	3354	5
chr10	102724981	102724982	chunk0029_244_1	121.2059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	102724711	102725435	-31071987	-	L1MCb	LINE	L1	-4896	1149	434	5
chr10	103150551	103150552	chunk0029_264_1	6.39934	AR_DHT_Control	chr10	103150057	103151181	-30646241	-	L1ME1	LINE	L1	-11	6168	4887	5
chr10	103487406	103487407	chunk0029_275_1	11.44891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	103487330	103487792	-30309630	+	ORSL-2b	DNA	hAT-Tip100	10	508	0	5
chr10	103524158	103524159	chunk0029_277_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	103523485	103525343	-30272079	-	L1MA5	LINE	L1	-182	7537	5659	5
chr10	103768174	103768175	chunk0029_285_1	54.52805	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	103768077	103768746	-30028676	-	L2a	LINE	L2	-2	3424	2653	5
chr10	103924385	103924386	chunk0029_292_1	86.4128	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	103924363	103924469	-29872953	-	L2c	LINE	L2	-112	3275	3177	5
chr10	103935539	103935540	chunk0029_294_1	8.2753	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	103935407	103935858	-29861564	+	L1PA13	LINE	L1	4987	5442	-719	5
chr10	103971008	103971009	chunk0029_297_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	103970809	103971031	-29826391	-	Tigger4a	DNA	TcMar-Tigger	-1	235	2	5
chr10	103992038	103992039	chunk0029_298_1	7.58612	AR_DHT_Control	chr10	103991957	103992120	-29805302	-	L2b	LINE	L2	-116	3259	3109	5
chr10	104110726	104110727	chunk0029_301_1	14.1316	AR_DHT_Control	chr10	104110533	104110741	-29686681	-	Charlie22a	DNA	hAT-Charlie	-24	467	293	5
chr10	104288633	104288634	chunk0029_310_1	209.68824	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr10	104288189	104288774	-29508648	-	L1ME4a	LINE	L1	-292	5832	5269	5
chr10	104340221	104340222	chunk0029_319_1	7.74745	AR_DHT_Control	chr10	104340180	104340330	-29457092	+	L2c	LINE	L2	2911	3087	-300	5
chr10	104473623	104473624	chunk0029_324_1	17.1706	AR_DHT_Control	chr10	104473194	104473637	-29323785	-	MER61D	LTR	ERV1	0	501	1	5
chr10	104520850	104520851	chunk0029_329_1	9.23066	AR_DHT_Control	chr10	104520786	104520933	-29276489	+	MIRb	SINE	MIR	87	242	-26	5
chr10	104618454	104618455	chunk0029_330_1	4.60831	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	104618229	104618684	-29178738	+	LTR16A2	LTR	ERVL	6	495	0	5
chr10	105990261	105990262	chunk0029_337_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	105989342	105990911	-27806511	+	L1MA4A	LINE	L1	1	1840	-5369	5
chr10	106162745	106162746	chunk0029_339_1	19.91586	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	106161572	106164033	-27633389	+	L1M4b	LINE	L1	2	2530	-4337	5
chr10	106509127	106509128	chunk0029_344_1	74.2051	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	106508815	106509281	-27288141	+	LTR16C	LTR	ERVL	12	489	0	5
chr10	107076738	107076739	chunk0029_351_1	21.625	AR_DHT_Control	chr10	107076556	107077260	-26720162	-	Helitron1Nb_Mam	RC	Helitron	-44	1072	358	5
chr10	107527457	107527458	chunk0029_354_1	10.4825	AR_DHT_Control	chr10	107527103	107527534	-26269888	+	L3	LINE	CR1	3506	3985	-114	5
chr10	107573799	107573800	chunk0029_357_1	22.0202	AR_DHT_Control	chr10	107572582	107574267	-26223155	+	L1MC2	LINE	L1	4709	6344	0	5
chr10	107586340	107586341	chunk0029_358_1	25.0175	AR_DHT_Control	chr10	107586139	107586731	-26210691	+	LTR10C	LTR	ERV1	1	591	0	5
chr10	107618482	107618483	chunk0029_361_1	12.6258	AR_DHT_Control	chr10	107618046	107618661	-26178761	+	Tigger3	DNA	TcMar-Tigger	2421	3028	-1	5
chr10	107627109	107627110	chunk0029_362_1	77.9832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	107626676	107627525	-26169897	+	L1MB8	LINE	L1	5283	6114	-64	5
chr10	107653074	107653075	chunk0029_364_1	37.8409	AR_DHT_Control	chr10	107652577	107653112	-26144310	+	MLT1H1	LTR	ERVL-MaLR	1	555	0	5
chr10	107668721	107668722	chunk0029_366_1	10.84686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	107668503	107668924	-26128498	-	MER70A	LTR	ERVL	-36	436	1	5
chr10	107749426	107749427	chunk0029_368_1	67.7297	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	107749071	107749620	-26047802	-	L1ME1	LINE	L1	-59	6120	5573	5
chr10	108040666	108040667	chunk0029_373_1	31.3982	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	108040632	108040686	-25756736	-	MIRb	SINE	MIR	-29	239	188	5
chr10	108091007	108091008	chunk0029_375_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	108090410	108091125	-25706297	+	L1M1	LINE	L1	697	1412	-6153	5
chr10	108722107	108722108	chunk0029_381_1	261.7002	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	108721607	108723425	-25073997	+	L1PA17	LINE	L1	2277	4158	-2691	5
chr10	109527569	109527570	chunk0029_383_1	9.19742	AR_DHT_Control	chr10	109527526	109527727	-24269695	+	L1PA15-16	LINE	L1	3	203	-6650	5
chr10	109539971	109539972	chunk0029_384_1	44.28352	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	109536621	109543034	-24254388	-	L1PA7	LINE	L1	0	6469	6	5
chr10	109546301	109546302	chunk0029_386_1	40.32457	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	109546297	109552454	-24244968	+	L1PA6	LINE	L1	1	6154	0	5
chr10	109580455	109580456	chunk0029_394_1	9.54045	AR_DHT_Control	chr10	109580432	109580559	-24216863	+	L2b	LINE	L2	3241	3375	0	5
chr10	109585674	109585675	chunk0029_395_1	48.82164	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	109585325	109585772	-24211650	+	L1MB7	LINE	L1	5643	6106	-78	5
chr10	109633235	109633236	chunk0029_402_1	23.2028	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	109632461	109633334	-24164088	+	MER4-int	LTR	ERV1	1594	2495	-4103	5
chr10	109650453	109650454	chunk0029_403_1	22.93161	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	109650350	109650539	-24146883	-	L1MEc	LINE	L1	-6198	202	37	5
chr10	109772236	109772237	chunk0029_405_1	8.65676	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	109771994	109772278	-24025144	+	L2b	LINE	L2	2873	3214	-161	5
chr10	109926547	109926548	chunk0029_412_1	18.78929	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	109926282	109926735	-23870687	+	MLT1C	LTR	ERVL-MaLR	6	464	-3	5
chr10	109986016	109986017	chunk0029_422_1	8.00425	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	109984952	109986087	-23811335	-	L1PB1	LINE	L1	0	6151	5020	5
chr10	110003515	110003516	chunk0029_429_1	6.24363	AR_DHT_Control	chr10	110003452	110003704	-23793718	-	MIRc	SINE	MIR	-4	264	22	5
chr10	110010691	110010692	chunk0029_430_1	45.9301	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	110010614	110010802	-23786620	-	MIR	SINE	MIR	-2	260	13	5
chr10	110045967	110045968	chunk0029_433_1	40.9424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	110045479	110046488	-23750934	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	1067	-1	5
chr10	110097673	110097674	chunk0029_437_1	25.7399	AR_DHT_Control	chr10	110097452	110097767	-23699655	-	L1MC4a	LINE	L1	-11	7871	7571	5
chr10	110214162	110214163	chunk0029_439_1	6.86759	AR_DHT_Control	chr10	110214153	110214284	-23583138	-	MIR3	SINE	MIR	-63	145	4	5
chr10	110426398	110426399	chunk0029_447_1	4.09307	AR_DHT_Control	chr10	110426298	110426706	-23370716	+	HAL1	LINE	L1	2071	2507	0	5
chr10	110447553	110447554	chunk0029_449_1	10.9345	AR_DHT_Control	chr10	110447463	110447820	-23349602	+	L2a	LINE	L2	3059	3425	-1	5
chr10	110458400	110458401	chunk0029_451_1	124.6562	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	110458236	110458428	-23338994	-	L1ME3G	LINE	L1	-14	910	720	5
chr10	110483822	110483823	chunk0029_454_1	29.29193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	110483624	110483844	-23313578	+	AluJo	SINE	Alu	111	310	-2	5
chr10	110754898	110754899	chunk0030_1_1	5.73469	AR_DHT_Control	chr10	110754122	110754979	-23042443	-	L1MEd	LINE	L1	-4712	1513	658	5
chr10	110950678	110950679	chunk0030_18_1	65.6246	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	110949048	110951722	-22845700	+	L1MA9	LINE	L1	4046	6804	-468	5
chr10	111265386	111265387	chunk0030_29_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111264748	111265891	-22531531	-	L1MC5a	LINE	L1	-461	2316	1137	5
chr10	111347769	111347770	chunk0030_31_1	20.69778	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	111347462	111348057	-22449365	+	MLT1E2	LTR	ERVL-MaLR	2	654	0	5
chr10	111525913	111525914	chunk0030_37_1	36.5796	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111525830	111526013	-22271409	+	MER58A	DNA	hAT-Charlie	9	224	0	5
chr10	111579978	111579979	chunk0030_39_1	11.9613	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111579674	111582793	-22214629	-	ERVL-B4-int	LTR	ERVL	0	5714	2619	5
chr10	111581627	111581628	chunk0030_41_1	155.5529	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr10	111579674	111582793	-22214629	-	ERVL-B4-int	LTR	ERVL	0	5714	2619	5
chr10	111790005	111790006	chunk0030_51_1	35.03356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	111789783	111791180	-22006242	-	L1MD2	LINE	L1	-1589	4955	3482	5
chr10	111916324	111916325	chunk0030_56_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111916106	111916332	-21881090	+	MER58A	DNA	hAT-Charlie	1	216	-8	5
chr10	111924553	111924554	chunk0030_57_1	7.50454	AR_DHT_Control	chr10	111924365	111924595	-21872827	+	MIR	SINE	MIR	14	260	-2	5
chr10	111963184	111963185	chunk0030_61_1	28.15804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	111962711	111963243	-21834179	+	L2a	LINE	L2	2905	3408	-18	5
chr10	111972275	111972276	chunk0030_63_1	4.79975	AR_DHT_Control	chr10	111972205	111973004	-21824418	+	FordPrefect	DNA	hAT-Tip100	331	1174	-509	5
chr10	112012492	112012493	chunk0030_66_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	112012272	112013043	-21784379	-	MER54B	LTR	ERVL	-1	792	3	5
chr10	112258529	112258530	chunk0030_77_1	48.1092	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	112258442	112258556	-21538866	+	MIRb	SINE	MIR	133	262	0	5
chr10	112330780	112330781	chunk0030_82_1	7.70009	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	112330644	112330784	-21466638	-	MamRep564	Unknown	Unknown	-91	266	121	5
chr10	112384939	112384940	chunk0030_90_1	14.68017	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	112384890	112385092	-21412330	-	L1ME4b	LINE	L1	-233	659	450	5
chr10	112391679	112391680	chunk0030_93_1	8.58456	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	112391662	112391885	-21405537	+	MER102a	DNA	hAT-Charlie	10	241	-100	5
chr10	112396425	112396426	chunk0030_94_1	64.3392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	112396308	112396532	-21400890	-	MER58A	DNA	hAT-Charlie	0	224	2	5
chr10	112458094	112458095	chunk0030_100_1	7.36432	AR_DHT_Control	chr10	112457588	112458172	-21339250	-	L2b	LINE	L2	-1003	2416	1789	5
chr10	112804597	112804598	chunk0030_114_1	27.78625	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	112804447	112804647	-20992775	-	MIR1_Amn	SINE	MIR	-31	231	26	5
chr10	113271843	113271844	chunk0030_124_1	24.93174	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	113271721	113272144	-20525278	+	L1ME1	LINE	L1	5735	6163	-16	5
chr10	113461388	113461389	chunk0030_132_1	6.45888	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	113461268	113461412	-20336010	+	L1MEh	LINE	L1	13	158	-2077	5
chr10	113463900	113463901	chunk0030_133_1	9.01771	AR_DHT_Control	chr10	113463824	113465240	-20332182	+	L1MEc	LINE	L1	36	1482	-4918	5
chr10	113485351	113485352	chunk0030_136_1	14.49376	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	113485180	113485371	-20312051	-	MER58A	DNA	hAT-Charlie	-1	223	38	5
chr10	113713372	113713373	chunk0030_142_1	26.7411	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	113713327	113713574	-20083848	-	MIR	SINE	MIR	0	262	3	5
chr10	113720580	113720581	chunk0030_144_1	5.0408	AR_DHT_Control	chr10	113720172	113720842	-20076580	-	L1ME3A	LINE	L1	-15	6158	5397	5
chr10	113739534	113739535	chunk0030_146_1	5.50096	AR_DHT_Control	chr10	113739490	113739881	-20057541	-	L2a	LINE	L2	-5	3421	2980	5
chr10	113762351	113762352	chunk0030_147_1	10.4222	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	113761820	113764102	-20033320	-	L1ME1	LINE	L1	-2490	3829	1594	5
chr10	113977028	113977029	chunk0030_159_1	11.0326	AR_DHT_Control	chr10	113976993	113977143	-19820279	-	L2b	LINE	L2	-4	3383	3207	5
chr10	114057224	114057225	chunk0030_165_1	32.7232	AR_DHT_Control	chr10	114056816	114057292	-19740130	-	MamRep605	LTR?	LTR?	-219	630	90	5
chr10	114066965	114066966	chunk0030_166_1	23.84114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114066964	114067019	-19730403	-	MIR3	SINE	MIR	-3	205	150	5
chr10	114195360	114195361	chunk0030_180_1	20.1349	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114195059	114196161	-19601261	-	L1MD1	LINE	L1	-3213	3324	2208	5
chr10	114223323	114223324	chunk0030_186_1	37.4952	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	114223160	114223544	-19573878	-	L1M3a	LINE	L1	-5520	435	29	5
chr10	114280150	114280151	chunk0030_191_1	11.79803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114280079	114280157	-19517265	+	MIR	SINE	MIR	123	198	-64	5
chr10	114327729	114327730	chunk0030_193_1	35.421	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114327558	114327790	-19469632	-	MER58A	DNA	hAT-Charlie	0	224	1	5
chr10	114337343	114337344	chunk0030_195_1	4.19326	AR_DHT_Control	chr10	114337155	114337388	-19460034	+	MIRb	SINE	MIR	17	267	-1	5
chr10	114348310	114348311	chunk0030_197_1	51.89918	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	114348232	114348391	-19449031	-	L1ME1	LINE	L1	-15	6164	5986	5
chr10	114518676	114518677	chunk0030_206_1	6.50438	AR_DHT_Control	chr10	114518570	114518744	-19278678	+	MER58A	DNA	hAT-Charlie	18	203	-21	5
chr10	114636227	114636228	chunk0030_213_1	31.93214	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	114635939	114636234	-19161188	-	L2c	LINE	L2	-6	3381	3051	5
chr10	114722961	114722962	chunk0030_221_1	7.66966	AR_DHT_Control	chr10	114722793	114723116	-19074306	+	L2c	LINE	L2	3056	3387	0	5
chr10	114772685	114772686	chunk0030_223_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	114772621	114773439	-19023983	+	L1MEd	LINE	L1	638	1498	-5588	5
chr10	114981231	114981232	chunk0030_236_1	53.7986	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	114981182	114981430	-18815992	-	L1MEd	LINE	L1	-6263	840	599	5
chr10	115020761	115020762	chunk0030_237_1	7.82111	AR_DHT_Control	chr10	115020646	115020842	-18776580	-	L2c	LINE	L2	-4	3422	3201	5
chr10	115031148	115031149	chunk0030_238_1	20.1485	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	115030896	115031250	-18766172	+	L2b	LINE	L2	2912	3298	-128	5
chr10	115247071	115247072	chunk0030_244_1	21.93486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	115246951	115248313	-18549109	+	L1MA5A	LINE	L1	4886	6292	-5	5
chr10	115248471	115248472	chunk0030_245_1	6.58498	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	115248377	115248522	-18548900	+	L1MD	LINE	L1	3713	3857	-2289	5
chr10	115580159	115580160	chunk0030_252_1	41.857	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	115577653	115581512	-18215910	-	L1MA9	LINE	L1	-1896	5663	1978	5
chr10	115653655	115653656	chunk0030_254_1	5.81492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	115653370	115653845	-18143577	+	L2c	LINE	L2	2932	3375	-12	5
chr10	115866394	115866395	chunk0030_258_1	9.38217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	115866390	115866620	-17930802	-	MIRb	SINE	MIR	-6	262	26	5
chr10	116213292	116213293	chunk0030_264_1	24.89631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	116213057	116213333	-17584089	+	L1M5	LINE	L1	5535	5823	-301	5
chr10	116284615	116284616	chunk0030_265_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	116284483	116284717	-17512705	-	MLT1C	LTR	ERVL-MaLR	0	467	207	5
chr10	116392314	116392315	chunk0030_268_1	95.577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	116392238	116392478	-17404944	+	HAL1	LINE	L1	370	654	-1853	5
chr10	116474628	116474629	chunk0030_274_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	116473850	116475429	-17321993	+	L1PA13	LINE	L1	4563	6161	-2	5
chr10	116553496	116553497	chunk0030_276_1	283.7413	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	116553404	116553688	-17243734	+	Tigger3b	DNA	TcMar-Tigger	951	1231	0	5
chr10	116867791	116867792	chunk0030_284_1	11.8523	AR_DHT_Control	chr10	116867704	116867835	-16929587	-	L2b	LINE	L2	-33	3342	3210	5
chr10	117229793	117229794	chunk0030_290_1	32.4829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	117229726	117229943	-16567479	-	L1MC5	LINE	L1	-2015	7289	7071	5
chr10	117327603	117327604	chunk0030_295_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	117327297	117327706	-16469716	+	LTR54B	LTR	ERV1	1	496	-2	5
chr10	117348439	117348440	chunk0030_296_1	22.0868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	117348283	117348457	-16448965	-	MIRb	SINE	MIR	-6	262	59	5
chr10	117764012	117764013	chunk0030_308_1	119.3884	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	117763845	117764207	-16033215	+	L2b	LINE	L2	3050	3413	-13	5
chr10	117921538	117921539	chunk0030_315_1	4.53037	AR_DHT_Control	chr10	117921460	117921961	-15875461	+	L2a	LINE	L2	2594	3153	-273	5
chr10	117981385	117981386	chunk0030_317_1	9.01771	AR_DHT_Control	chr10	117981260	117981510	-15815912	-	MLT1K	LTR	ERVL-MaLR	-21	574	333	5
chr10	118126227	118126228	chunk0030_323_1	42.14767	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	118125095	118126817	-15670605	-	L1PB4	LINE	L1	-113	6043	4284	5
chr10	118244202	118244203	chunk0030_325_1	29.11813	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	118244180	118244291	-15553131	-	MER81	DNA	hAT-Blackjack	-3	111	1	5
chr10	118269056	118269057	chunk0030_329_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	118269054	118269180	-15528242	+	MIRb	SINE	MIR	21	151	-117	5
chr10	118431360	118431361	chunk0030_340_1	20.10317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	118431229	118431793	-15365629	-	L1M5	LINE	L1	-1230	4916	4295	5
chr10	118581577	118581578	chunk0030_351_1	47.15051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	118581549	118582076	-15215346	+	LTR32	LTR	ERVL	7	455	-2	5
chr10	118645519	118645520	chunk0030_357_1	27.74	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	118644575	118646350	-15151072	-	L1PB	LINE	L1	-1079	5067	3279	5
chr10	118740227	118740228	chunk0030_363_1	5.51262	AR_DHT_Control	chr10	118740170	118740327	-15057095	+	HAL1	LINE	L1	2001	2176	-331	5
chr10	118764065	118764066	chunk0030_365_1	38.0203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	118763991	118764135	-15033287	+	MLT1N2	LTR	ERVL-MaLR	415	562	0	5
chr10	119041742	119041743	chunk0030_369_1	9.96971	AR_DHT_Control	chr10	119041640	119041744	-14755678	+	Tigger19b	DNA	TcMar-Tigger	364	459	-91	5
chr10	119277949	119277950	chunk0030_377_1	40.3491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	119277548	119278137	-14519285	-	L1ME1	LINE	L1	0	6179	5559	5
chr10	119284997	119284998	chunk0030_378_1	63.43506	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	119284965	119285169	-14512253	-	L5	LINE	RTE-X	-9	2256	2043	5
chr10	119566104	119566105	chunk0030_387_1	20.6407	AR_DHT_Control	chr10	119565870	119566124	-14231298	+	AluJo	SINE	Alu	1	256	-56	5
chr10	119897163	119897164	chunk0030_398_1	68.2435	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	119897102	119897198	-13900224	+	L2	LINE	L2	6	104	-3315	5
chr10	120085300	120085301	chunk0030_405_1	49.5722	AR_DHT_Control	chr10	120085201	120085360	-13712062	+	L1ME5	LINE	L1	5887	6058	-136	5
chr10	120101236	120101237	chunk0030_406_1	68.3392	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	120101137	120101265	-13696157	-	FLAM_C	SINE	Alu	-173	129	1	5
chr10	120111754	120111755	chunk0030_408_1	54.1645	AR_DHT_Control	chr10	120111742	120111770	-13685652	+	(AAAC)n	Simple_repeat	Simple_repeat	1	30	0	5
chr10	120193513	120193514	chunk0030_411_1	22.57306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	120192396	120194255	-13603167	-	L1MA4A	LINE	L1	-8	7357	5382	5
chr10	120195887	120195888	chunk0030_412_1	8.13469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	120195416	120197076	-13600346	-	L1MA4A	LINE	L1	-5474	1735	1	5
chr10	120205657	120205658	chunk0030_413_1	7.5995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	120205554	120205682	-13591740	-	MIR	SINE	MIR	-105	157	24	5
chr10	120229872	120229873	chunk0030_414_1	11.8363	AR_DHT_Control	chr10	120229610	120230223	-13567199	-	L1ME3A	LINE	L1	-9	6164	5585	5
chr10	120253726	120253727	chunk0030_417_1	87.6392	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	120253505	120253912	-13543510	+	L2c	LINE	L2	2916	3350	-37	5
chr10	120259785	120259786	chunk0030_418_1	30.04525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	120258377	120260093	-13537329	-	Tigger1	DNA	TcMar-Tigger	-699	1719	1	5
chr10	120392757	120392758	chunk0030_425_1	30.4396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	120392668	120393165	-13404257	+	L4_C_Mam	LINE	RTE-X	3686	4186	-952	5
chr10	120727339	120727340	chunk0030_435_1	44.13316	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	120727261	120727433	-13069989	+	Charlie8	DNA	hAT-Charlie	46	222	-2206	5
chr10	120857948	120857949	chunk0030_442_1	13.2288	AR_DHT_Control	chr10	120857795	120857984	-12939438	-	L2a	LINE	L2	-45	3381	3183	5
chr10	121022117	121022118	chunk0030_448_1	6.13992	AR_DHT_Control	chr10	121021748	121023153	-12774269	-	HAL1	LINE	L1	-6	2501	1076	5
chr10	121155965	121155966	chunk0030_456_1	11.5199	AR_DHT_Control	chr10	121155723	121156182	-12641240	-	LTR16A2	LTR	ERVL	0	495	28	5
chr10	121324966	121324967	chunk0030_460_1	8.7059	AR_DHT_Control	chr10	121324898	121325469	-12471953	+	L1MC3	LINE	L1	7109	7677	-108	5
chr10	121401369	121401370	chunk0031_4_1	10.8433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	121401232	121401865	-12395557	+	L1MD1	LINE	L1	5422	6072	-170	5
chr10	121821996	121821997	chunk0031_17_1	7.36432	AR_DHT_Control	chr10	121821865	121822547	-11974875	+	L1ME3A	LINE	L1	5442	6166	-7	5
chr10	121835605	121835606	chunk0031_18_1	26.74528	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	121835462	121835901	-11961521	+	L1MC5	LINE	L1	8831	9276	-28	5
chr10	121844107	121844108	chunk0031_20_1	6.48772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	121844102	121844255	-11953167	+	AluJo	SINE	Alu	120	281	-31	5
chr10	122026832	122026833	chunk0031_30_1	16.89442	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	122026526	122027412	-11770010	-	L1MC1	LINE	L1	-207	6126	5186	5
chr10	122390847	122390848	chunk0031_44_1	8.03415	AR_DHT_Control	chr10	122390807	122391665	-11405757	-	L1MB5	LINE	L1	-530	5644	4777	5
chr10	122701458	122701459	chunk0031_55_1	18.161	AR_DHT_Control	chr10	122701436	122701479	-11095943	+	L2c	LINE	L2	3336	3378	-9	5
chr10	122748662	122748663	chunk0031_56_1	42.6076	AR_DHT_Control	chr10	122748338	122748761	-11048661	-	MER70B	LTR	ERVL	-126	452	20	5
chr10	122811385	122811386	chunk0031_57_1	19.21134	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	122811265	122811464	-10985958	+	L2a	LINE	L2	3225	3426	0	5
chr10	122865019	122865020	chunk0031_63_1	22.40354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	122864518	122865216	-10932206	-	L1MC2	LINE	L1	-125	6637	5875	5
chr10	122997855	122997856	chunk0031_68_1	5.26765	AR_DHT_Control	chr10	122997624	122997964	-10799458	-	MER58B	DNA	hAT-Charlie	0	341	1	5
chr10	123180658	123180659	chunk0031_81_1	23.99584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	123180072	123180801	-10616621	+	L1MB3	LINE	L1	5431	6173	-10	5
chr10	123255095	123255096	chunk0031_86_1	13.67817	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	123254329	123255943	-10541479	+	(CAC)n	Simple_repeat	Simple_repeat	1	1663	0	5
chr10	123393914	123393915	chunk0031_90_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	123393909	123394005	-10403417	-	MIRb	SINE	MIR	0	268	165	5
chr10	123507635	123507636	chunk0031_92_1	19.06426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	123507333	123507650	-10289772	-	MER57B2	LTR	ERV1	-58	376	1	5
chr10	123561905	123561906	chunk0031_93_1	27.89412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	123561831	123562249	-10235173	+	MLT2B4	LTR	ERVL	1	556	0	5
chr10	123744805	123744806	chunk0031_95_1	14.0944	AR_DHT_Control	chr10	123744646	123744854	-10052568	-	MER3	DNA	hAT-Charlie	0	209	1	5
chr10	124186894	124186895	chunk0031_103_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	124186846	124187169	-9610253	+	MLT1F	LTR	ERVL-MaLR	7	346	-202	5
chr10	124739285	124739286	chunk0031_122_1	7.15668	AR_DHT_Control	chr10	124739206	124739321	-9058101	+	MIR	SINE	MIR	1	125	-137	5
chr10	124798921	124798922	chunk0031_125_1	9.31879	AR_DHT_Control	chr10	124798869	124799096	-8998326	-	L2a	LINE	L2	-90	3336	3108	5
chr10	124913455	124913456	chunk0031_130_1	55.1569	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	124913451	124913757	-8883665	+	AluJr	SINE	Alu	2	310	-2	5
chr10	124926565	124926566	chunk0031_133_1	15.4155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	124925828	124926951	-8870471	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	5
chr10	124953667	124953668	chunk0031_137_1	33.82674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	124953516	124953770	-8843652	-	MamRTE1	LINE	RTE-BovB	-244	3568	3313	5
chr10	125008731	125008732	chunk0031_142_1	33.3889	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	125008668	125009257	-8788165	+	LTR10C	LTR	ERV1	1	591	0	5
chr10	125165674	125165675	chunk0031_157_1	76.6387	AR_DHT_Control	chr10	125165645	125165741	-8631681	-	L2b	LINE	L2	-8	3367	3265	5
chr10	125184308	125184309	chunk0031_158_1	13.2288	AR_DHT_Control	chr10	125178986	125185121	-8612301	-	L1PA6	LINE	L1	0	6154	1	5
chr10	125282859	125282860	chunk0031_160_1	51.20991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125282749	125282901	-8514521	+	L3b	LINE	CR1	4732	4890	-342	5
chr10	125289896	125289897	chunk0031_162_1	6.58746	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125288850	125290697	-8506725	+	L1PA15	LINE	L1	4315	6163	-2	5
chr10	125303827	125303828	chunk0031_163_1	17.5977	AR_DHT_Control	chr10	125303427	125304026	-8493396	+	L1MB7	LINE	L1	5575	6184	0	5
chr10	125407759	125407760	chunk0031_166_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	125405405	125408354	-8389068	-	L1MA3	LINE	L1	-4219	3346	17	5
chr10	125416162	125416163	chunk0031_167_1	6.62784	AR_DHT_Control	chr10	125416061	125416184	-8381238	+	(AC)n	Simple_repeat	Simple_repeat	1	123	0	5
chr10	125449350	125449351	chunk0031_168_1	10.7726	AR_DHT_Control	chr10	125449280	125449361	-8348061	+	LTR33A	LTR	ERVL	434	520	0	5
chr10	125539037	125539038	chunk0031_170_1	102.8412	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125538993	125539251	-8258171	+	MER130	DNA	DNA	1050	1310	-284	5
chr10	125611475	125611476	chunk0031_175_1	18.35055	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125611009	125611750	-8185672	-	L1ME4a	LINE	L1	-221	5903	5122	5
chr10	125633609	125633610	chunk0031_179_1	78.7052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	125633498	125633661	-8163761	-	L1ME4c	LINE	L1	-39	791	615	5
chr10	125646599	125646600	chunk0031_182_1	121.85077	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125646355	125646612	-8150810	+	L1M5	LINE	L1	2909	3185	-2961	5
chr10	125695125	125695126	chunk0031_189_1	68.60673	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125694960	125695168	-8102254	+	MamRTE1	LINE	RTE-BovB	1924	2136	-1676	5
chr10	125756375	125756376	chunk0031_194_1	55.2625	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125755080	125756695	-8040727	-	L1MCc	LINE	L1	-2073	4868	3169	5
chr10	125886246	125886247	chunk0031_205_1	16.96083	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr10	125885744	125886441	-7910981	+	L2a	LINE	L2	2614	3340	-86	5
chr10	125936579	125936580	chunk0031_216_1	67.3103	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	125936326	125936785	-7860637	-	L1ME3A	LINE	L1	-9	6164	5705	5
chr10	125961964	125961965	chunk0031_217_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	125961955	125962145	-7835277	+	L1M2	LINE	L1	5110	5298	-845	5
chr10	126186992	126186993	chunk0031_222_1	9.34168	AR_DHT_Control	chr10	126186847	126187028	-7610394	-	MIRc	SINE	MIR	-46	222	23	5
chr10	126372499	126372500	chunk0031_227_1	27.42096	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	126372321	126372532	-7424890	-	MIRc	SINE	MIR	-40	228	3	5
chr10	126759824	126759825	chunk0031_239_1	24.4287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	126759584	126760065	-7037357	-	Tigger17a	DNA	TcMar-Tigger	-163	491	1	5
chr10	126813348	126813349	chunk0031_241_1	10.5524	AR_DHT_Control	chr10	126813316	126813460	-6983962	-	MLT1A0	LTR	ERVL-MaLR	0	365	224	5
chr10	126895411	126895412	chunk0031_243_1	32.34414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	126895325	126895423	-6901999	+	L2c	LINE	L2	3239	3341	-34	5
chr10	126910980	126910981	chunk0031_244_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	126910533	126911276	-6886146	-	L1MD1	LINE	L1	-7	6235	5413	5
chr10	127044375	127044376	chunk0031_246_1	204.8943	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	127044209	127044435	-6752987	+	LTR82A	LTR	ERVL	469	691	-181	5
chr10	127244192	127244193	chunk0031_259_1	4.36616	AR_DHT_Control	chr10	127244089	127244287	-6553135	+	MER53	DNA	hAT	1	193	0	5
chr10	127308509	127308510	chunk0031_262_1	30.3298	AR_DHT_Control	chr10	127308416	127309729	-6487693	-	L1PA8	LINE	L1	0	6172	4854	5
chr10	127694627	127694628	chunk0031_266_1	8.62865	AR_DHT_Control	chr10	127694381	127694717	-6102705	-	LTR50	LTR	ERVL	-5	790	286	5
chr10	127834209	127834210	chunk0031_269_1	5.82105	AR_DHT_Control	chr10	127834085	127834225	-5963197	+	MER53	DNA	hAT	25	190	-3	5
chr10	128109928	128109929	chunk0031_276_1	219.6031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	128109725	128110024	-5687398	-	MamRep137	DNA	TcMar-Tigger	-140	370	75	5
chr10	128176125	128176126	chunk0031_280_1	65.11	AR_DHT_Control	chr10	128175953	128176370	-5621052	-	L1ME3Cz	LINE	L1	-520	5604	5355	5
chr10	128438822	128438823	chunk0031_290_1	5.24685	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	128438536	128439048	-5358374	+	(TG)n	Simple_repeat	Simple_repeat	1	527	0	5
chr10	128443708	128443709	chunk0031_291_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	128443078	128444105	-5353317	+	L1MEf	LINE	L1	669	1909	-4506	5
chr10	128633431	128633432	chunk0031_295_1	13.60226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	128633066	128633489	-5163933	+	L1MC4a	LINE	L1	5480	5937	-1945	5
chr10	128662697	128662698	chunk0031_298_1	30.3602	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	128662684	128663967	-5133455	-	L1M3	LINE	L1	-1204	4936	3643	5
chr10	128752336	128752337	chunk0031_302_1	10.9812	AR_DHT_Control	chr10	128751984	128752884	-5044538	+	L1ME1	LINE	L1	4126	5026	-1120	5
chr10	128800766	128800767	chunk0031_303_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	128800567	128800915	-4996507	-	MLT2D	LTR	ERVL	0	414	91	5
chr10	129157879	129157880	chunk0031_318_1	8.75677	AR_DHT_Control	chr10	129157820	129157928	-4639494	+	L2a	LINE	L2	3302	3425	-1	5
chr10	129203488	129203489	chunk0031_321_1	5.56779	AR_DHT_Control	chr10	129203185	129203541	-4593881	+	THE1C	LTR	ERVL-MaLR	6	375	0	5
chr10	129211623	129211624	chunk0031_322_1	61.3325	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	129211595	129211640	-4585782	+	L1M6	LINE	L1	3	48	-6448	5
chr10	129453550	129453551	chunk0031_333_1	8.27376	AR_DHT_Control	chr10	129453003	129453579	-4343843	+	Tigger3c	DNA	TcMar-Tigger	1	602	0	5
chr10	129502331	129502332	chunk0031_335_1	46.99787	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	129502185	129502374	-4295048	+	MIRb	SINE	MIR	29	234	-34	5
chr10	129507863	129507864	chunk0031_336_1	17.40654	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	129507771	129507919	-4289503	+	X9_LINE	LINE	L1	5	162	-774	5
chr10	129820645	129820646	chunk0031_355_1	62.8552	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	129820572	129820689	-3976733	+	L2a	LINE	L2	3299	3414	-12	5
chr10	130081991	130081992	chunk0031_359_1	150.8785	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	130081067	130082178	-3715244	+	L1MC4a	LINE	L1	4484	4958	-1256	5
chr10	130345886	130345887	chunk0031_367_1	30.5245	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	130345805	130346384	-3451038	-	L1ME1	LINE	L1	-11	6168	5598	5
chr10	130447409	130447410	chunk0031_369_1	8.02791	AR_DHT_Control	chr10	130444092	130447657	-3349765	-	L1ME4a	LINE	L1	-952	6502	2759	5
chr10	130464274	130464275	chunk0031_371_1	76.34845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	130463626	130464282	-3333140	-	LTR18B	LTR	ERVL	-13	601	1	5
chr10	130790543	130790544	chunk0031_380_1	8.90584	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	130790007	130791733	-3005689	+	(AC)n	Simple_repeat	Simple_repeat	1	1810	0	5
chr10	130925690	130925691	chunk0031_382_1	4.73937	AR_DHT_Control	chr10	130924923	130926843	-2870579	+	(TG)n	Simple_repeat	Simple_repeat	1	1951	0	5
chr10	131643194	131643195	chunk0031_401_1	6.7293	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	131643150	131643234	-2154188	-	MLT1H2	LTR	ERVL-MaLR	-337	152	67	5
chr10	131877981	131877982	chunk0031_405_1	51.7567	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	131877278	131878532	-1918890	+	L1MC	LINE	L1	3980	5280	-866	5
chr10	132015862	132015863	chunk0031_411_1	39.0831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	132015785	132016134	-1781288	-	LTR10C	LTR	ERV1	-244	347	1	5
chr10	132084707	132084708	chunk0031_412_1	6.48643	AR_DHT_Control	chr10	132082907	132085492	-1711930	-	L1PB1	LINE	L1	-366	6501	3942	5
chr10	132266241	132266242	chunk0031_418_1	34.13803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	132265661	132266482	-1530940	+	L1ME2	LINE	L1	5283	6163	-1	5
chr10	132364460	132364461	chunk0031_425_1	78.63926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	132364293	132364784	-1432638	+	(CACTCA)n	Simple_repeat	Simple_repeat	1	557	-29	5
chr10	132482386	132482387	chunk0031_434_1	9.58976	AR_DHT_Control	chr10	132482344	132482881	-1314541	+	L1M5	LINE	L1	3524	4073	-2073	5
chr10	132496044	132496045	chunk0031_437_1	5.81492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	132495966	132496423	-1300999	-	HAL1M8	LINE	L1	-1489	1502	1010	5
chr10	132535175	132535176	chunk0031_439_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	132535103	132535217	-1262205	+	(TGTGCA)n	Simple_repeat	Simple_repeat	1	124	0	5
chr10	132566532	132566533	chunk0031_442_1	6.37684	AR_DHT_Control	chr10	132566518	132566731	-1230691	+	L1M5	LINE	L1	3804	3998	-2148	5
chr10	132580697	132580698	chunk0031_444_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	132580654	132581840	-1215582	-	L1ME2z	LINE	L1	-13	6431	5198	5
chr10	132634886	132634887	chunk0031_448_1	121.29	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	132634426	132634997	-1162425	-	L1MC4	LINE	L1	-3418	2796	2233	5
chr10	132680099	132680100	chunk0031_451_1	18.8118	SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	132679773	132680477	-1116945	+	L1MB3	LINE	L1	4783	5491	-692	5
chr10	132756400	132756401	chunk0032_436_1	7.11942	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	132756161	132756428	-1040994	+	(GT)n	Simple_repeat	Simple_repeat	1	262	0	5
chr10	132967680	132967681	chunk0032_442_1	12.5682	AR_DHT_Control	chr10	132967128	132967946	-829476	-	LTR1A2	LTR	ERV1	0	837	1	5
chr10	132981249	132981250	chunk0032_443_1	16.74121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	132980946	132981283	-816139	+	L1MEa	LINE	L1	123	495	-5575	5
chr10	133121806	133121807	chunk0032_448_1	5.80103	AR_DHT_Control	chr10	133121686	133122063	-675359	+	(GT)n	Simple_repeat	Simple_repeat	2	379	0	5
chr10	133177619	133177620	chunk0032_450_1	7.39014	SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	133177141	133178224	-619198	+	(TG)n	Simple_repeat	Simple_repeat	1	1122	0	5
chr10	133265987	133265988	chunk0032_452_1	34.2542	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	133265818	133266199	-531223	+	L1MC4a	LINE	L1	7159	7566	-316	5
chr10	133304492	133304493	chunk0032_453_1	6.84874	AR_DHT_Control	chr10	133304393	133304540	-492882	+	Charlie4z	DNA	hAT-Charlie	1	166	-1	5
chr10	133313725	133313726	chunk0032_454_1	53.377	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr10	133313695	133314686	-482736	+	LTR13	LTR	ERVK	1	1007	0	5
chr10	133562585	133562586	chunk0032_459_1	20.46021	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr10	133562316	133562870	-234552	+	MER4-int	LTR	ERV1	1161	1740	-4858	5
chr10	133689488	133689489	chunk0032_460_1	270.9476	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr10	133685649	133690462	-106960	+	BSR/Beta	Satellite	Satellite	1	4799	0	5
chr11	470150	470151	chunk0032_8_1	5.3309	AR_DHT_Control	chr11	469592	470578	-134616044	+	L1MC3	LINE	L1	6558	7751	-131	5
chr11	742971	742972	chunk0032_19_1	89.61217	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	742840	743089	-134343533	-	L1M5	LINE	L1	-357	5822	5563	5
chr11	954883	954884	chunk0032_29_1	5.16739	AR_DHT_Control	chr11	954847	955006	-134131616	-	HAL1ME	LINE	L1	-153	2312	2141	5
chr11	1147897	1147898	chunk0032_39_1	11.26316	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	1147386	1148549	-133938073	+	(TG)n	Simple_repeat	Simple_repeat	1	1196	0	5
chr11	1429288	1429289	chunk0032_43_1	7.37742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	1428721	1429387	-133657235	+	(GT)n	Simple_repeat	Simple_repeat	1	670	0	5
chr11	1509606	1509607	chunk0032_45_1	15.2915	AR_DHT_Control	chr11	1509590	1509753	-133576869	+	L1M5	LINE	L1	5266	5434	-690	5
chr11	1739557	1739558	chunk0032_53_1	43.5445	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	1739398	1739895	-133346727	-	L2a	LINE	L2	-2	3424	2933	5
chr11	1791974	1791975	chunk0032_54_1	9.21264	AR_DHT_Control	chr11	1791660	1792155	-133294467	-	L1MEc	LINE	L1	-3942	2458	1961	5
chr11	2131978	2131979	chunk0032_61_1	8.01864	AR_DHT_Control	chr11	2131414	2132105	-132954517	+	(TG)n	Simple_repeat	Simple_repeat	1	692	0	5
chr11	2325921	2325922	chunk0032_69_1	27.1604	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	2324939	2326034	-132760588	+	ERVL-B4-int	LTR	ERVL	2140	3303	-2411	5
chr11	2375911	2375912	chunk0032_70_1	22.32724	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	2375867	2376072	-132710550	-	Charlie29a	DNA	hAT-Charlie	-1	718	517	5
chr11	2600858	2600859	chunk0032_72_1	6.89429	AR_DHT_Control	chr11	2600327	2601189	-132485433	-	L1MC4	LINE	L1	-2	8040	7139	5
chr11	2613102	2613103	chunk0032_73_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	2612416	2613675	-132472947	-	L1M4a2	LINE	L1	-1185	1539	77	5
chr11	2615160	2615161	chunk0032_74_1	7.58612	AR_DHT_Control	chr11	2614421	2616947	-132469675	-	L1M4	LINE	L1	-1031	5115	2575	5
chr11	2623880	2623881	chunk0032_75_1	4.26208	AR_DHT_Control	chr11	2623846	2624541	-132462081	-	L1MC	LINE	L1	-625	5677	5029	5
chr11	2695614	2695615	chunk0032_76_1	25.4674	AR_DHT_Control	chr11	2695524	2695870	-132390752	-	L1M4	LINE	L1	-459	5735	5371	5
chr11	2805600	2805601	chunk0032_80_1	8.62865	AR_DHT_Control	chr11	2805498	2805697	-132280925	+	MER58A	DNA	hAT-Charlie	26	224	0	5
chr11	2901930	2901931	chunk0032_84_1	5.58563	AR_DHT_Control	chr11	2901870	2901976	-132184646	+	(CCCT)n	Simple_repeat	Simple_repeat	1	109	0	5
chr11	2998299	2998300	chunk0032_87_1	8.47279	AR_DHT_Control	chr11	2998225	2998592	-132088030	-	L1MD2	LINE	L1	-92	6267	5835	5
chr11	3099337	3099338	chunk0032_92_1	5.90945	AR_DHT_Control	chr11	3099098	3099551	-131987071	+	L1MC2	LINE	L1	5856	6332	-12	5
chr11	3124486	3124487	chunk0032_93_1	13.4018	AR_DHT_Control	chr11	3124451	3124667	-131961955	+	L2b	LINE	L2	2987	3198	-177	5
chr11	3880060	3880061	chunk0032_114_1	8.82835	AR_DHT_Control	chr11	3880045	3880171	-131206451	+	MIRb	SINE	MIR	6	130	-138	5
chr11	4040644	4040645	chunk0032_120_1	7.38582	AR_DHT_Control	chr11	4040264	4040656	-131045966	+	L2c	LINE	L2	2921	3356	-31	5
chr11	4152293	4152294	chunk0032_122_1	21.98277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	4152180	4152387	-130934235	-	L1MEc	LINE	L1	-4149	2251	2038	5
chr11	4196971	4196972	chunk0032_125_1	68.76619	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4196922	4197062	-130889560	-	MER65D	LTR	ERV1	-326	147	5	5
chr11	4375699	4375700	chunk0032_127_1	47.9913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4375519	4375705	-130710917	-	MER58A	DNA	hAT-Charlie	-1	223	1	5
chr11	4484273	4484274	chunk0032_130_1	49.2875	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	4484221	4484632	-130601990	-	L2	LINE	L2	-635	2784	2367	5
chr11	4495259	4495260	chunk0032_132_1	49.28254	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4493736	4496029	-130590593	-	HERVK13-int	LTR	ERVK	0	8116	5812	5
chr11	4606462	4606463	chunk0032_136_1	127.3654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	4606378	4606528	-130480094	+	L2a	LINE	L2	3268	3425	-1	5
chr11	4700629	4700630	chunk0032_143_1	20.76522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4700595	4700941	-130385681	+	L1M5	LINE	L1	5433	5821	-303	5
chr11	4742312	4742313	chunk0032_147_1	5.69226	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4742156	4742446	-130344176	-	L2c	LINE	L2	0	3387	3070	5
chr11	4751409	4751410	chunk0032_148_1	41.5347	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4751184	4751632	-130334990	-	L2c	LINE	L2	-8	3379	2910	5
chr11	4777876	4777877	chunk0032_151_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4777470	4778315	-130308307	-	L1ME3A	LINE	L1	-13	6160	5296	5
chr11	4841177	4841178	chunk0032_152_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	4838727	4841652	-130244970	+	L1MA1	LINE	L1	8	2989	-4576	5
chr11	4922045	4922046	chunk0032_154_1	7.53305	AR_DHT_Control	chr11	4921856	4922139	-130164483	-	L1PB4	LINE	L1	-7	6149	5862	5
chr11	5463678	5463679	chunk0032_169_1	15.88198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	5463669	5463751	-129622871	-	L2b	LINE	L2	0	3375	3301	5
chr11	5519376	5519377	chunk0032_171_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	5519362	5519504	-129567118	-	MIRb	SINE	MIR	-48	220	63	5
chr11	5898533	5898534	chunk0032_177_1	15.67527	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	5898158	5899301	-129187321	-	L1PA17	LINE	L1	-726	5440	4279	5
chr11	6227264	6227265	chunk0032_181_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	6227172	6227381	-128859241	-	MIR	SINE	MIR	-1	261	32	5
chr11	6489515	6489516	chunk0032_193_1	12.711	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	6489491	6489595	-128597027	+	L2a	LINE	L2	3309	3420	-6	5
chr11	6587734	6587735	chunk0032_194_1	8.27376	AR_DHT_Control	chr11	6586519	6587937	-128498685	+	MER52D	LTR	ERV1	1	2121	-2	5
chr11	6676437	6676438	chunk0032_197_1	41.4298	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	6676248	6677443	-128409179	+	L1MA9	LINE	L1	4845	6079	-233	5
chr11	6807155	6807156	chunk0032_199_1	15.2716	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	6806291	6808001	-128278621	-	L1PA16	LINE	L1	0	6935	5179	5
chr11	7349323	7349324	chunk0032_205_1	26.25645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	7349182	7349375	-127737247	+	L1MB4	LINE	L1	5975	6180	0	5
chr11	7457417	7457418	chunk0032_208_1	6.44773	AR_DHT_Control	chr11	7456956	7457507	-127629115	+	L2c	LINE	L2	2806	3378	-9	5
chr11	7533417	7533418	chunk0032_214_1	192.9825	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	7533395	7533830	-127552792	-	L2c	LINE	L2	-10	3377	2946	5
chr11	7590665	7590666	chunk0032_228_1	10.6533	AR_DHT_Control	chr11	7590639	7590681	-127495941	+	MIR	SINE	MIR	200	240	-22	5
chr11	7622967	7622968	chunk0032_231_1	198.66454	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr11	7622941	7623091	-127463531	-	MIRb	SINE	MIR	-2	266	110	5
chr11	7636031	7636032	chunk0032_235_1	87.7734	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	7636025	7636181	-127450441	-	Tigger16b	DNA	TcMar-Tigger	-76	260	102	5
chr11	7752791	7752792	chunk0032_239_1	21.89111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	7752671	7752858	-127333764	-	L2a	LINE	L2	-264	3162	2964	5
chr11	7908380	7908381	chunk0032_240_1	16.0494	AR_DHT_Control	chr11	7908257	7908688	-127177934	+	LTR23	LTR	ERV1	1	437	0	5
chr11	8186767	8186768	chunk0032_245_1	9.01771	AR_DHT_Control	chr11	8186627	8187434	-126899188	-	L1M5	LINE	L1	-1227	4919	4023	5
chr11	8551950	8551951	chunk0032_250_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	8551905	8552406	-126534216	-	L1M3b	LINE	L1	-5769	512	5	5
chr11	8596856	8596857	chunk0032_251_1	6.39136	AR_DHT_Control	chr11	8596600	8596947	-126489675	+	L2a	LINE	L2	3046	3426	0	5
chr11	8724715	8724716	chunk0032_256_1	34.96717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	8724654	8725135	-126361487	+	LTR40a	LTR	ERVL	1	492	-27	5
chr11	8739461	8739462	chunk0032_258_1	10.6337	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	8739295	8739498	-126347124	+	MIRc	SINE	MIR	24	253	-15	5
chr11	8828977	8828978	chunk0032_260_1	4.19326	AR_DHT_Control	chr11	8828940	8829219	-126257403	+	(GT)n	Simple_repeat	Simple_repeat	1	297	0	5
chr11	9084327	9084328	chunk0032_271_1	35.3575	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	9083839	9084755	-126001867	+	L1MC4a	LINE	L1	6542	7505	-377	5
chr11	9103634	9103635	chunk0032_275_1	38.3638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	9103502	9104097	-125982525	-	MER45R	DNA	hAT-Tip100	-950	631	4	5
chr11	9107341	9107342	chunk0032_277_1	38.4732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	9105464	9107467	-125979155	+	L1ME4b	LINE	L1	70	425	-535	5
chr11	9116253	9116254	chunk0032_279_1	12.27768	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	9114014	9116255	-125970367	-	Tigger1	DNA	TcMar-Tigger	-109	2309	1	5
chr11	9246196	9246197	chunk0032_282_1	7.36432	AR_DHT_Control	chr11	9246028	9246330	-125840292	+	LTR39	LTR	ERV1	1	312	-471	5
chr11	9563624	9563625	chunk0032_293_1	5.10868	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	9562791	9563906	-125522716	-	L1MA2	LINE	L1	-5776	1789	22	5
chr11	9775001	9775002	chunk0032_304_1	17.38916	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	9774872	9775002	-125311620	+	MER5A1	DNA	hAT-Charlie	16	166	0	5
chr11	9821072	9821073	chunk0032_305_1	7.92341	AR_DHT_Control	chr11	9820774	9821161	-125265461	+	MER4C	LTR	ERV1	1	465	0	5
chr11	9897015	9897016	chunk0032_312_1	21.11203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	9896907	9897228	-125189394	+	L1MB3	LINE	L1	5541	5851	-332	5
chr11	9904070	9904071	chunk0032_313_1	100.3576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	9903429	9904105	-125182517	-	MER50B	LTR	ERV1	0	697	1	5
chr11	9910305	9910306	chunk0032_314_1	9.93187	AR_DHT_Control	chr11	9910138	9910766	-125175856	+	Tigger3b	DNA	TcMar-Tigger	2	599	-632	5
chr11	9931360	9931361	chunk0032_315_1	11.1716	AR_DHT_Control	chr11	9930625	9933967	-125152655	+	L1PA6	LINE	L1	174	3493	-2834	5
chr11	10039886	10039887	chunk0032_320_1	6.40219	AR_DHT_Control	chr11	10039666	10040947	-125045675	+	L1MC4	LINE	L1	6333	8042	0	5
chr11	10058587	10058588	chunk0032_323_1	37.9626	AR_DHT_Control	chr11	10056631	10060746	-125025876	+	L1PA14	LINE	L1	1573	5842	-2299	5
chr11	10066503	10066504	chunk0032_324_1	59.4596	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	10066357	10066995	-125019627	+	L1MEc	LINE	L1	3913	4576	-1743	5
chr11	10195236	10195237	chunk0032_332_1	10.6083	AR_DHT_Control	chr11	10195092	10195285	-124891337	-	MER20	DNA	hAT-Charlie	0	219	32	5
chr11	10243015	10243016	chunk0032_335_1	68.91091	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	10242180	10244139	-124842483	+	L1MA10	LINE	L1	2027	4077	-2299	5
chr11	10244350	10244351	chunk0032_336_1	45.3479	AR_DHT_Control	chr11	10244149	10244680	-124841942	-	L1MA10	LINE	L1	-1015	5361	4817	5
chr11	10285682	10285683	chunk0032_337_1	7.67158	AR_DHT_Control	chr11	10285418	10285844	-124800778	+	MER51B	LTR	ERV1	1	377	0	5
chr11	10290995	10290996	chunk0032_339_1	27.42002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	10290612	10291133	-124795489	+	L1MC4	LINE	L1	6460	7009	-1033	5
chr11	10291713	10291714	chunk0032_340_1	11.4715	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	10291698	10292395	-124794227	+	L1MC4	LINE	L1	7158	8037	-5	5
chr11	10292198	10292199	chunk0032_342_1	14.99707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	10291698	10292395	-124794227	+	L1MC4	LINE	L1	7158	8037	-5	5
chr11	10326675	10326676	chunk0032_347_1	15.44694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	10326645	10326797	-124759825	-	Tigger16b	DNA	TcMar-Tigger	-1	335	183	5
chr11	10432592	10432593	chunk0032_350_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	10431634	10435599	-124651023	+	L1MB7	LINE	L1	2185	6165	-19	5
chr11	10519619	10519620	chunk0032_352_1	20.96463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	10519493	10519875	-124566747	-	Tigger3c	DNA	TcMar-Tigger	-14	588	211	5
chr11	10522507	10522508	chunk0032_353_1	45.4221	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	10522396	10522556	-124564066	+	L3	LINE	CR1	3510	3673	-426	5
chr11	10527444	10527445	chunk0032_355_1	14.6833	AR_DHT_Control	chr11	10527115	10527991	-124558631	-	L2a	LINE	L2	-4	3422	2524	5
chr11	10858303	10858304	chunk0032_367_1	7.38866	AR_DHT_Control	chr11	10858287	10858418	-124228204	-	MER5A	DNA	hAT-Charlie	0	189	57	5
chr11	11034873	11034874	chunk0032_372_1	13.1909	AR_DHT_Control	chr11	11034231	11035029	-124051593	+	L1MD2	LINE	L1	5553	6350	-9	5
chr11	11167843	11167844	chunk0032_375_1	25.416	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	11167743	11168091	-123918531	-	MLT1N2	LTR	ERVL-MaLR	0	562	213	5
chr11	11477847	11477848	chunk0032_386_1	29.57195	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	11477633	11477864	-123608758	+	LTR78	LTR	ERV1	1037	1299	-5	5
chr11	11562806	11562807	chunk0032_387_1	6.86821	AR_DHT_Control	chr11	11562767	11562906	-123523716	-	MIRb	SINE	MIR	-114	154	5	5
chr11	11590833	11590834	chunk0032_390_1	8.26412	AR_DHT_Control	chr11	11590659	11591157	-123495465	+	Tigger3b	DNA	TcMar-Tigger	1	519	-712	5
chr11	11596707	11596708	chunk0032_391_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	11595514	11597660	-123488962	-	L1PA8A	LINE	L1	-582	6409	4131	5
chr11	11606325	11606326	chunk0032_392_1	7.72121	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	11606203	11606347	-123480275	-	L2b	LINE	L2	-5	3382	3239	5
chr11	11616224	11616225	chunk0032_395_1	76.3512	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	11616158	11616599	-123470023	+	L1ME4c	LINE	L1	68	570	-260	5
chr11	11662114	11662115	chunk0032_399_1	13.468	AR_DHT_Control	chr11	11661916	11662293	-123424329	+	LTR85a	LTR	Gypsy?	198	702	0	5
chr11	11692104	11692105	chunk0032_400_1	5.6425	AR_DHT_Control	chr11	11691544	11694642	-123391980	+	L1P2	LINE	L1	1	3085	-3061	5
chr11	11841958	11841959	chunk0032_405_1	6.58498	AR_DHT_Control	chr11	11841952	11842009	-123244613	+	(GGC)n	Simple_repeat	Simple_repeat	1	57	0	5
chr11	12025708	12025709	chunk0032_414_1	7.36432	AR_DHT_Control	chr11	12025543	12026356	-123060266	-	MER21C	LTR	ERVL	-40	898	9	5
chr11	12280591	12280592	chunk0033_2_1	15.1077	AR_DHT_Control	chr11	12280376	12280785	-122805837	-	MLT1B	LTR	ERVL-MaLR	0	390	1	5
chr11	12301504	12301505	chunk0033_5_1	31.97372	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	12301289	12301511	-122785111	-	L1ME3	LINE	L1	-294	5868	5646	5
chr11	12382201	12382202	chunk0033_8_1	105.5525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	12381514	12382538	-122704084	-	Tigger2b_Pri	DNA	TcMar-Tigger	-1	1067	2	5
chr11	12439519	12439520	chunk0033_14_1	5.73469	AR_DHT_Control	chr11	12439500	12439585	-122647037	+	MLT1M	LTR	ERVL-MaLR	25	108	-564	5
chr11	12586069	12586070	chunk0033_21_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	12586060	12586445	-122500177	-	MER63B	DNA	hAT-Blackjack	-1	435	27	5
chr11	12730223	12730224	chunk0033_25_1	14.51543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	12730200	12730416	-122356206	-	MIRc	SINE	MIR	-6	262	28	5
chr11	12918820	12918821	chunk0033_31_1	7.63982	AR_DHT_Control	chr11	12918609	12919114	-122167508	+	L1ME3A	LINE	L1	5607	6152	-21	5
chr11	12991593	12991594	chunk0033_32_1	6.7814	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	12991388	12992537	-122094085	-	Ricksha_b	DNA	MULE-MuDR	0	1255	1	5
chr11	13208703	13208704	chunk0033_43_1	4.93365	AR_DHT_Control	chr11	13208613	13208798	-121877824	-	MIRb	SINE	MIR	-36	232	26	5
chr11	13271179	13271180	chunk0033_45_1	36.6352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	13271104	13271418	-121815204	-	L2b	LINE	L2	0	3387	3040	5
chr11	13319162	13319163	chunk0033_48_1	6.58498	AR_DHT_Control	chr11	13319099	13319465	-121767157	-	L1ME3G	LINE	L1	-272	652	278	5
chr11	13339856	13339857	chunk0033_55_1	7.80833	AR_DHT_Control	chr11	13339457	13339972	-121746650	+	L2a	LINE	L2	2766	3416	-10	5
chr11	13409383	13409384	chunk0033_57_1	19.33243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	13408459	13409486	-121677136	+	L2a	LINE	L2	2310	3426	0	5
chr11	13480732	13480733	chunk0033_62_1	59.05475	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13479955	13483886	-121602736	+	L1PA5	LINE	L1	4	3910	-2236	5
chr11	13608886	13608887	chunk0033_66_1	5.9324	AR_DHT_Control	chr11	13608391	13609070	-121477552	-	L1MB7	LINE	L1	-16	6168	5422	5
chr11	13629962	13629963	chunk0033_67_1	62.85777	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	13629523	13630272	-121456350	-	L1ME3G	LINE	L1	-46	878	36	5
chr11	13762309	13762310	chunk0033_73_1	17.80863	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13761953	13762419	-121324203	+	LTR33	LTR	ERVL	4	506	-9	5
chr11	13763483	13763484	chunk0033_74_1	51.1148	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13763423	13763488	-121323134	+	L2a	LINE	L2	3319	3426	0	5
chr11	13786877	13786878	chunk0033_75_1	37.76422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13786462	13787047	-121299575	-	LTR50	LTR	ERVL	-116	679	3	5
chr11	13952949	13952950	chunk0033_80_1	51.9583	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13952798	13953000	-121133622	-	L2a	LINE	L2	-4	3422	3220	5
chr11	13972216	13972217	chunk0033_84_1	15.4816	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	13971936	13972617	-121114005	-	L3	LINE	CR1	-216	3883	3098	5
chr11	14030226	14030227	chunk0033_86_1	17.46416	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	14030005	14030292	-121056330	+	MamTip3	DNA	hAT-Tip100	174	500	0	5
chr11	14151165	14151166	chunk0033_96_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	14150914	14151170	-120935452	-	L3	LINE	CR1	-2260	1839	1577	5
chr11	14235984	14235985	chunk0033_99_1	4.9436	AR_DHT_Control	chr11	14235707	14236383	-120850239	-	L2a	LINE	L2	-152	3274	2509	5
chr11	14274178	14274179	chunk0033_100_1	8.24382	AR_DHT_Control	chr11	14274013	14274307	-120812315	+	MER58B	DNA	hAT-Charlie	4	339	-2	5
chr11	14308256	14308257	chunk0033_104_1	5.50529	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	14307858	14308288	-120778334	+	L1ME4b	LINE	L1	350	866	-26	5
chr11	14374384	14374385	chunk0033_107_1	25.28124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	14374315	14374423	-120712199	+	L2c	LINE	L2	3279	3387	0	5
chr11	14412978	14412979	chunk0033_111_1	151.1103	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	14412780	14413001	-120673621	-	MER58A	DNA	hAT-Charlie	-1	223	1	5
chr11	14453121	14453122	chunk0033_114_1	66.4026	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	14452897	14453136	-120633486	+	MIRb	SINE	MIR	4	260	-8	5
chr11	14543517	14543518	chunk0033_121_1	13.12593	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	14543387	14543518	-120543104	-	L1MB7	LINE	L1	-1	6183	6054	5
chr11	14637424	14637425	chunk0033_126_1	6.48643	AR_DHT_Control	chr11	14636178	14637514	-120449108	+	L2c	LINE	L2	1930	3369	-18	5
chr11	14676260	14676261	chunk0033_128_1	54.55183	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	14676214	14676690	-120409932	-	Tigger3c	DNA	TcMar-Tigger	0	602	106	5
chr11	14882523	14882524	chunk0033_131_1	16.505	AR_DHT_Control	chr11	14882514	14882607	-120204015	+	MER91A	DNA	hAT-Tip100	89	196	0	5
chr11	15287863	15287864	chunk0033_134_1	8.52187	AR_DHT_Control	chr11	15287808	15288018	-119798604	-	MER58A	DNA	hAT-Charlie	-1	223	6	5
chr11	15314088	15314089	chunk0033_136_1	36.873	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	15314077	15314144	-119772478	-	L2b	LINE	L2	-20	3355	3289	5
chr11	15342554	15342555	chunk0033_137_1	5.40815	AR_DHT_Control	chr11	15342101	15342695	-119743927	+	L2a	LINE	L2	2726	3426	0	5
chr11	15360639	15360640	chunk0033_139_1	80.5806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	15360591	15360651	-119725971	-	L2a	LINE	L2	0	3426	3367	5
chr11	15441707	15441708	chunk0033_140_1	7.33982	AR_DHT_Control	chr11	15441606	15441750	-119644872	+	MER2	DNA	TcMar-Tigger	136	279	-66	5
chr11	15487143	15487144	chunk0033_143_1	47.16583	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	15487132	15487167	-119599455	+	(CA)n	Simple_repeat	Simple_repeat	1	35	0	5
chr11	15494024	15494025	chunk0033_147_1	96.0154	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	15493936	15494736	-119591886	-	MER54B	LTR	ERVL	-2	791	1	5
chr11	15532667	15532668	chunk0033_151_1	98.5201	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	15531923	15533870	-119552752	+	L1MA6	LINE	L1	5120	7024	-236	5
chr11	15595571	15595572	chunk0033_153_1	43.2636	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	15595273	15595624	-119490998	-	MER57C2	LTR	ERV1	-4	430	1	5
chr11	15600935	15600936	chunk0033_155_1	25.00878	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	15600772	15600951	-119485671	+	MIRb	SINE	MIR	87	265	-3	5
chr11	15606216	15606217	chunk0033_159_1	86.2947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	15606209	15606382	-119480240	+	MER45A	DNA	hAT-Tip100	5	177	-1	5
chr11	15618696	15618697	chunk0033_162_1	140.6891	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	15618445	15618738	-119467884	+	L2c	LINE	L2	3100	3387	0	5
chr11	15662552	15662553	chunk0033_165_1	21.45	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	15662468	15662580	-119424042	+	L2a	LINE	L2	3304	3426	0	5
chr11	15663888	15663889	chunk0033_166_1	9.51856	AR_DHT_Control	chr11	15663865	15663982	-119422640	+	MIRc	SINE	MIR	13	132	-136	5
chr11	15668882	15668883	chunk0033_169_1	282.9318	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	15668686	15668907	-119417715	+	L2c	LINE	L2	3057	3280	-107	5
chr11	15695276	15695277	chunk0033_170_1	48.3964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	15695268	15695426	-119391196	-	MIRc	SINE	MIR	-26	242	83	5
chr11	15700357	15700358	chunk0033_172_1	28.6463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	15700298	15700451	-119386171	+	L2b	LINE	L2	3215	3384	-3	5
chr11	15756616	15756617	chunk0033_176_1	9.24875	AR_DHT_Control	chr11	15756593	15756798	-119329824	+	L2a	LINE	L2	3208	3423	-3	5
chr11	15785170	15785171	chunk0033_177_1	13.7447	AR_DHT_Control	chr11	15784390	15785265	-119301357	-	MamRep1527	LTR	LTR	-44	925	41	5
chr11	16395191	16395192	chunk0033_196_1	63.4045	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	16395143	16395668	-118690954	-	L2b	LINE	L2	-11	3364	2853	5
chr11	16632713	16632714	chunk0033_198_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	16628649	16633177	-118453445	-	L1PA16	LINE	L1	-1526	5323	734	5
chr11	16747046	16747047	chunk0033_199_1	80.2957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	16746952	16747130	-118339492	+	MamSINE1	SINE	tRNA-RTE	43	223	-67	5
chr11	16769085	16769086	chunk0033_200_1	15.7508	AR_DHT_Control	chr11	16768410	16769145	-118317477	+	L1ME3B	LINE	L1	5502	6219	-23	5
chr11	16818608	16818609	chunk0033_202_1	9.88994	AR_DHT_Control	chr11	16818372	16818677	-118267945	+	L2c	LINE	L2	3023	3332	-55	5
chr11	16918759	16918760	chunk0033_203_1	21.05805	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	16918686	16918928	-118167694	-	MER113A	DNA	hAT-Charlie	0	314	54	5
chr11	16955395	16955396	chunk0033_207_1	22.9835	AR_DHT_Control	chr11	16955233	16955550	-118131072	+	L2c	LINE	L2	3059	3387	0	5
chr11	17275555	17275556	chunk0033_218_1	120.56025	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	17275535	17275589	-117811033	-	MIRb	SINE	MIR	-1	267	216	5
chr11	17308151	17308152	chunk0033_221_1	11.1716	AR_DHT_Control	chr11	17308135	17308592	-117778030	-	L1MC4	LINE	L1	-1127	6915	6454	5
chr11	17329728	17329729	chunk0033_222_1	54.016	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	17327360	17329823	-117756799	-	L1MA2	LINE	L1	-4836	2729	67	5
chr11	17376590	17376591	chunk0033_224_1	15.8999	AR_DHT_Control	chr11	17376381	17377196	-117709426	+	HUERS-P3-int	LTR	ERV1	6938	7752	-1167	5
chr11	17411207	17411208	chunk0033_228_1	40.6364	AR_DHT_Control	chr11	17411034	17411357	-117675265	+	L2c	LINE	L2	3027	3378	-9	5
chr11	17615319	17615320	chunk0033_230_1	24.2074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	17614448	17615648	-117470974	-	L1ME1	LINE	L1	-1634	6324	5023	5
chr11	17812752	17812753	chunk0033_234_1	8.2753	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	17812578	17812823	-117273799	+	L2b	LINE	L2	3066	3425	-1	5
chr11	18063389	18063390	chunk0033_241_1	59.4946	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	18063332	18063500	-117023122	+	L2c	LINE	L2	3191	3384	-3	5
chr11	18094123	18094124	chunk0033_245_1	31.5726	AR_DHT_Control	chr11	18094010	18094165	-116992457	+	MER5A	DNA	hAT-Charlie	1	165	-24	5
chr11	18195955	18195956	chunk0033_248_1	82.30366	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	18195938	18196012	-116890610	-	L2b	LINE	L2	0	3426	3309	6
chr11	18394180	18394181	chunk0033_256_1	8.9624	AR_DHT_Control	chr11	18394161	18394260	-116692362	-	L2a	LINE	L2	-5	3421	3326	6
chr11	18734026	18734027	chunk0033_262_1	5.10868	AR_DHT_Control	chr11	18733997	18734196	-116352426	+	MIRc	SINE	MIR	56	268	0	6
chr11	19028469	19028470	chunk0033_267_1	17.21349	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	19028278	19028559	-116058063	-	MER54A	LTR	ERVL	0	901	641	6
chr11	19092203	19092204	chunk0033_269_1	9.92883	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	19091809	19092479	-115994143	+	L1MD2	LINE	L1	4931	5616	-743	6
chr11	19119699	19119700	chunk0033_270_1	13.7447	AR_DHT_Control	chr11	19119404	19119838	-115966784	+	L2a	LINE	L2	2949	3425	-1	6
chr11	19143361	19143362	chunk0033_271_1	10.7047	AR_DHT_Control	chr11	19143297	19143436	-115943186	+	L2c	LINE	L2	3257	3387	0	6
chr11	19670423	19670424	chunk0033_292_1	67.98354	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	19669967	19670448	-115416174	+	L2b	LINE	L2	2867	3370	-5	6
chr11	19939910	19939911	chunk0033_299_1	8.96258	AR_DHT_Control	chr11	19939903	19939949	-115146673	+	(TTT)n	Simple_repeat	Simple_repeat	1	46	0	6
chr11	20068488	20068489	chunk0033_301_1	7.59394	AR_DHT_Control	chr11	20068487	20068650	-115017972	+	MIRb	SINE	MIR	4	178	-90	6
chr11	20132575	20132576	chunk0033_304_1	4.86605	AR_DHT_Control	chr11	20131945	20133244	-114953378	+	L1M3f	LINE	L1	1238	2542	-5023	6
chr11	20696975	20696976	chunk0033_315_1	9.21264	AR_DHT_Control	chr11	20696729	20697104	-114389518	-	MER57B2	LTR	ERV1	-12	391	9	6
chr11	20728162	20728163	chunk0033_316_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	20727837	20729622	-114357000	-	L1P4	LINE	L1	-545	5621	3830	6
chr11	20840569	20840570	chunk0033_320_1	17.24699	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	20840320	20840804	-114245818	-	MLT1G	LTR	ERVL-MaLR	0	591	33	6
chr11	21075669	21075670	chunk0033_322_1	9.08241	AR_DHT_Control	chr11	21075465	21075732	-114010890	-	AluJr	SINE	Alu	-12	300	1	6
chr11	21368896	21368897	chunk0033_324_1	98.1112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	21368849	21368930	-113717692	-	MIR	SINE	MIR	-11	251	166	6
chr11	21650100	21650101	chunk0033_327_1	76.2351	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	21649808	21650129	-113436493	-	L1ME3E	LINE	L1	-272	5970	5650	6
chr11	22160314	22160315	chunk0033_328_1	5.59693	AR_DHT_Control	chr11	22160303	22160691	-112925931	-	MER67C	LTR	ERV1	-308	403	1	6
chr11	22221609	22221610	chunk0033_329_1	43.8677	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	22221592	22221781	-112864841	+	L2a	LINE	L2	3200	3410	-16	6
chr11	22457116	22457117	chunk0033_330_1	5.55081	AR_DHT_Control	chr11	22456774	22457483	-112629139	+	LTR8	LTR	ERV1	1	691	0	6
chr11	22794539	22794540	chunk0033_340_1	5.59693	AR_DHT_Control	chr11	22794216	22794701	-112291921	-	HAL1	LINE	L1	0	2507	2041	6
chr11	22923855	22923856	chunk0033_346_1	59.9992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	22923717	22923860	-112162762	+	MER117	DNA	hAT-Charlie	6	146	-51	6
chr11	22946817	22946818	chunk0033_348_1	140.4786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	22946628	22947079	-112139543	-	L1MCb	LINE	L1	-1801	4763	4306	6
chr11	22964008	22964009	chunk0033_353_1	10.1791	AR_DHT_Control	chr11	22963052	22966039	-112120583	-	L1PA6	LINE	L1	-3142	3004	8	6
chr11	23084831	23084832	chunk0033_362_1	9.21264	AR_DHT_Control	chr11	23084507	23084836	-112001786	+	AluJo	SINE	Alu	1	311	-1	6
chr11	23127899	23127900	chunk0033_366_1	11.0876	AR_DHT_Control	chr11	23126883	23127900	-111958722	+	Cheshire	DNA	hAT-Charlie	4	1071	-1349	6
chr11	23127899	23127900	chunk0033_366_1	11.0876	AR_DHT_Control	chr11	23127880	23127959	-111958663	+	Cheshire	DNA	hAT-Charlie	1270	1349	-1071	6
chr11	23153366	23153367	chunk0033_367_1	8.57499	AR_DHT_Control	chr11	23153347	23153668	-111932954	+	L2b	LINE	L2	2987	3344	-43	6
chr11	23275235	23275236	chunk0033_369_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	23275066	23275571	-111811051	-	MLT1C	LTR	ERVL-MaLR	-2	465	1	6
chr11	23397807	23397808	chunk0033_371_1	5.20246	AR_DHT_Control	chr11	23397427	23397918	-111688704	+	L1MA10	LINE	L1	5834	6332	-2	6
chr11	23463806	23463807	chunk0033_373_1	33.8223	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	23463644	23464049	-111622573	+	L1MDa	LINE	L1	2206	2605	-3932	6
chr11	23495169	23495170	chunk0033_374_1	48.4757	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	23494595	23495368	-111591254	+	L1MEf	LINE	L1	1159	2461	-913	6
chr11	23525955	23525956	chunk0033_376_1	17.65301	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	23525955	23525990	-111560632	+	A-rich	Low_complexity	Low_complexity	1	35	0	6
chr11	23822536	23822537	chunk0033_383_1	64.1112	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	23822340	23822727	-111263895	+	MLT1A1	LTR	ERVL-MaLR	1	392	-16	6
chr11	23866867	23866868	chunk0033_384_1	11.1388	AR_DHT_Control	chr11	23866818	23866981	-111219641	-	MLT1H2	LTR	ERVL-MaLR	-296	193	22	6
chr11	23991089	23991090	chunk0033_385_1	5.00158	AR_DHT_Control	chr11	23991081	23991215	-111095407	+	L2c	LINE	L2	3242	3382	-5	6
chr11	24123561	24123562	chunk0033_386_1	24.46446	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	24123510	24123570	-110963052	+	GA-rich	Low_complexity	Low_complexity	1	60	0	6
chr11	24226746	24226747	chunk0033_387_1	17.1173	AR_DHT_Control	chr11	24226693	24227221	-110859401	+	MLT2F	LTR	ERVL	1	618	-45	6
chr11	24354976	24354977	chunk0033_390_1	5.6425	AR_DHT_Control	chr11	24353321	24355059	-110731563	-	L1PBb	LINE	L1	-3811	3104	1282	6
chr11	24428515	24428516	chunk0033_391_1	40.7509	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	24428092	24428623	-110657999	+	MER34B	LTR	ERV1	1	565	0	6
chr11	24485459	24485460	chunk0033_394_1	109.9589	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	24485025	24485666	-110600956	-	L1MA1	LINE	L1	0	6302	5657	6
chr11	24567867	24567868	chunk0033_401_1	15.17188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	24567159	24567989	-110518633	+	L1M4b	LINE	L1	1621	2480	-4387	6
chr11	24742802	24742803	chunk0033_408_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	24742065	24745652	-110340970	-	L1PB1	LINE	L1	-360	6507	2925	6
chr11	24767589	24767590	chunk0033_412_1	18.12944	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	24767297	24767729	-110318893	-	MER57F	LTR	ERV1	0	435	1	6
chr11	24769100	24769101	chunk0033_413_1	8.52187	AR_DHT_Control	chr11	24768501	24769529	-110317093	+	L1MA6	LINE	L1	5230	6294	-6	6
chr11	24789206	24789207	chunk0033_414_1	14.95672	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	24789071	24789270	-110297352	+	LTR33	LTR	ERVL	3	200	-315	6
chr11	24802303	24802304	chunk0033_416_1	14.5882	AR_DHT_Control	chr11	24801912	24802430	-110284192	-	L1ME3A	LINE	L1	0	6173	5642	6
chr11	24887016	24887017	chunk0033_423_1	8.08101	AR_DHT_Control	chr11	24886913	24887186	-110199436	-	MER54B	LTR	ERVL	-60	733	454	6
chr11	25008343	25008344	chunk0033_426_1	14.8182	AR_DHT_Control	chr11	25008036	25009050	-110077572	-	LTR27E	LTR	ERV1	0	1077	1	6
chr11	25058695	25058696	chunk0033_428_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25058663	25058733	-110027889	-	MIR3	SINE	MIR	-138	130	61	6
chr11	25094220	25094221	chunk0033_429_1	31.2853	AR_DHT_Control	chr11	25093901	25094338	-109992284	+	MER92C	LTR	ERV1	1	590	0	6
chr11	25298255	25298256	chunk0033_434_1	64.1296	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25297915	25299261	-109787361	-	L1ME2z	LINE	L1	-242	6202	4672	6
chr11	25313591	25313592	chunk0033_435_1	65.8254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25313587	25313824	-109772798	+	MLT2C1	LTR	ERVL	1	242	-155	6
chr11	25337778	25337779	chunk0033_440_1	100.02557	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25337486	25338427	-109748195	+	L1MC1	LINE	L1	5373	6320	-13	6
chr11	25435422	25435423	chunk0033_446_1	9.38051	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25435258	25435500	-109651122	-	MIRb	SINE	MIR	-14	254	3	6
chr11	25515798	25515799	chunk0033_448_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	25515567	25516357	-109570265	-	LTR1B1	LTR	ERV1	0	818	1	6
chr11	25527931	25527932	chunk0033_449_1	9.09887	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25527707	25528386	-109558236	+	LTR82B	LTR	ERVL	126	830	0	6
chr11	25671374	25671375	chunk0033_455_1	27.4607	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25671252	25671410	-109415212	-	L1MB4	LINE	L1	-1	6179	6013	6
chr11	25677817	25677818	chunk0033_456_1	10.1791	AR_DHT_Control	chr11	25677651	25678347	-109408275	+	L1MA4	LINE	L1	5602	6300	0	6
chr11	25697913	25697914	chunk0033_457_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	25696996	25699504	-109387118	+	L1PA15-16	LINE	L1	2645	5128	-1787	6
chr11	25848888	25848889	chunk0034_4_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	25848430	25851296	-109235326	+	L1M3c	LINE	L1	1359	4034	-3528	6
chr11	25928183	25928184	chunk0034_8_1	78.093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	25928161	25928412	-109158210	-	LTR80B	LTR	ERVL	-316	268	1	6
chr11	26017580	26017581	chunk0034_11_1	20.27825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	26017420	26018148	-109068474	+	LTR39	LTR	ERV1	1	783	0	6
chr11	26032308	26032309	chunk0034_14_1	5.99997	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	26031975	26032715	-109053907	-	L1MD1	LINE	L1	-8	6234	5475	6
chr11	26048497	26048498	chunk0034_16_1	82.83541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	26048199	26048835	-109037787	+	MLT2F	LTR	ERVL	5	660	-3	6
chr11	26219930	26219931	chunk0034_22_1	109.4162	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	26219698	26220106	-108866516	-	MER70A	LTR	ERVL	-39	433	4	6
chr11	26270807	26270808	chunk0034_27_1	15.6663	AR_DHT_Control	chr11	26270636	26271059	-108815563	-	L2c	LINE	L2	0	3387	2910	6
chr11	26420590	26420591	chunk0034_29_1	13.2067	AR_DHT_Control	chr11	26420360	26420850	-108665772	+	LTR33	LTR	ERVL	1	505	-10	6
chr11	26815565	26815566	chunk0034_40_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	26815275	26819994	-108266628	-	L1PB1	LINE	L1	-1748	5114	6	6
chr11	26870089	26870090	chunk0034_44_1	25.18951	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	26869521	26870104	-108216518	+	L1PB2	LINE	L1	2875	3447	-3415	6
chr11	26892055	26892056	chunk0034_46_1	23.9107	AR_DHT_Control	chr11	26890421	26892337	-108194285	+	L1PA16	LINE	L1	4207	6164	-2	6
chr11	27051954	27051955	chunk0034_54_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	27049751	27052125	-108034497	-	L1MA9	LINE	L1	-900	5240	2816	6
chr11	27145939	27145940	chunk0034_62_1	56.8635	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	27145756	27146279	-107940343	+	L1ME1	LINE	L1	6627	7191	-9	6
chr11	27191193	27191194	chunk0034_74_1	23.42413	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	27190593	27191413	-107895209	+	L2	LINE	L2	2102	3012	-407	6
chr11	27478361	27478362	chunk0034_92_1	220.3702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	27478289	27478594	-107608028	-	AluJr	SINE	Alu	-3	309	1	6
chr11	27557747	27557748	chunk0034_100_1	27.8188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	27557592	27557890	-107528732	+	MLT1M	LTR	ERVL-MaLR	38	352	-320	6
chr11	27649456	27649457	chunk0034_101_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	27649441	27649654	-107436968	-	MIR	SINE	MIR	-10	252	38	6
chr11	27929837	27929838	chunk0034_111_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	27929050	27930380	-107156242	-	MER41-int	LTR	ERV1	0	5946	4590	6
chr11	28028178	28028179	chunk0034_115_1	46.0727	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	28028159	28031692	-107054930	+	L1PA5	LINE	L1	2619	6153	-1	6
chr11	28104706	28104707	chunk0034_116_1	8.18895	AR_DHT_Control	chr11	28104225	28104789	-106981833	+	L2a	LINE	L2	2823	3426	0	6
chr11	28144174	28144175	chunk0034_118_1	8.76676	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28144160	28144774	-106941848	+	L4_A_Mam	LINE	RTE-X	4149	4841	-149	6
chr11	28144552	28144553	chunk0034_119_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28144160	28144774	-106941848	+	L4_A_Mam	LINE	RTE-X	4149	4841	-149	6
chr11	28239040	28239041	chunk0034_121_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28238756	28239608	-106847014	+	L2a	LINE	L2	1930	2839	-580	6
chr11	28258045	28258046	chunk0034_122_1	5.6425	AR_DHT_Control	chr11	28257026	28259923	-106826699	-	L1MA2	LINE	L1	-4548	3017	15	6
chr11	28357618	28357619	chunk0034_125_1	4.14652	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28357430	28357658	-106728964	+	MIR	SINE	MIR	1	251	-11	6
chr11	28464435	28464436	chunk0034_126_1	8.27376	AR_DHT_Control	chr11	28464292	28464521	-106622101	-	MER58A	DNA	hAT-Charlie	0	224	3	6
chr11	28537024	28537025	chunk0034_132_1	24.94147	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	28537014	28537210	-106549412	-	L1M5	LINE	L1	-661	5582	5384	6
chr11	28537948	28537949	chunk0034_133_1	23.956	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28537817	28538110	-106548512	-	L1M5	LINE	L1	-1458	4688	4390	6
chr11	28682491	28682492	chunk0034_135_1	8.31418	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	28682485	28682568	-106404054	-	L2a	LINE	L2	0	3426	3295	6
chr11	28983848	28983849	chunk0034_138_1	89.3969	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	28983760	28984628	-106101994	-	MER54A	LTR	ERVL	-1	900	1	6
chr11	29469683	29469684	chunk0034_143_1	16.4778	AR_DHT_Control	chr11	29469535	29471204	-105615418	+	L1MA7	LINE	L1	4628	6291	0	6
chr11	29844845	29844846	chunk0034_144_1	9.21264	AR_DHT_Control	chr11	29844780	29844899	-105241723	-	L2a	LINE	L2	0	3426	3303	6
chr11	30223950	30223951	chunk0034_153_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	30223900	30224213	-104862409	-	MER33	DNA	hAT-Charlie	0	324	4	6
chr11	30230309	30230310	chunk0034_154_1	8.16452	AR_DHT_Control	chr11	30230189	30230473	-104856149	-	L2c	LINE	L2	-76	3299	2994	6
chr11	30282002	30282003	chunk0034_155_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	30281548	30282996	-104803626	+	L1PA16	LINE	L1	57	1876	-4627	6
chr11	30370368	30370369	chunk0034_158_1	122.1027	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	30369531	30370494	-104716128	-	L1MC4a	LINE	L1	-276	7766	6643	6
chr11	30475698	30475699	chunk0034_161_1	34.5076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	30475283	30477801	-104608821	-	L1ME3D	LINE	L1	-15	6164	3554	6
chr11	30795755	30795756	chunk0034_166_1	33.6406	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	30795582	30795783	-104290839	+	MIR3	SINE	MIR	2	201	-7	6
chr11	31001137	31001138	chunk0034_170_1	7.53305	AR_DHT_Control	chr11	31000933	31001249	-104085373	-	L1MC4	LINE	L1	-749	7293	6984	6
chr11	31012895	31012896	chunk0034_171_1	25.82308	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	31012644	31013124	-104073498	+	L1ME3Cz	LINE	L1	486	995	-2	6
chr11	31022413	31022414	chunk0034_173_1	15.92629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	31022111	31022528	-104064094	-	MLT1C	LTR	ERVL-MaLR	-41	464	3	6
chr11	31114883	31114884	chunk0034_175_1	15.00474	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	31114396	31114936	-103971686	-	L2a	LINE	L2	-168	3258	2645	6
chr11	31507577	31507578	chunk0034_180_1	148.1663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	31507531	31507935	-103578687	+	L1MA8	LINE	L1	5854	6250	-41	6
chr11	31552192	31552193	chunk0034_184_1	58.7719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	31552045	31553232	-103533390	+	L2a	LINE	L2	2030	3389	-37	6
chr11	32050410	32050411	chunk0034_194_1	38.24177	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	32050395	32050616	-103036006	+	MER58A	DNA	hAT-Charlie	3	224	0	6
chr11	32113395	32113396	chunk0034_197_1	44.4849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	32113389	32113589	-102973033	+	L1ME4a	LINE	L1	5846	6057	-67	6
chr11	32247343	32247344	chunk0034_198_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	32247268	32247400	-102839222	+	MLT1J	LTR	ERVL-MaLR	236	359	-153	6
chr11	32290911	32290912	chunk0034_199_1	20.0911	AR_DHT_Control	chr11	32290807	32290952	-102795670	+	L2b	LINE	L2	2936	3083	-292	6
chr11	32329663	32329664	chunk0034_204_1	203.898	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	32329576	32329699	-102756923	+	MER101	LTR	ERV1	351	474	0	6
chr11	32567684	32567685	chunk0034_211_1	99.882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	32566999	32567836	-102518786	-	L1MC1	LINE	L1	-3	6330	5458	6
chr11	32899519	32899520	chunk0034_216_1	30.68965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	32899472	32899522	-102187100	-	L2b	LINE	L2	-1	3425	3373	6
chr11	32913724	32913725	chunk0034_219_1	182.3556	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	32913654	32913913	-102172709	-	MIR	SINE	MIR	0	262	19	6
chr11	32982818	32982819	chunk0034_220_1	16.36698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	32982785	32982893	-102103729	+	L2a	LINE	L2	3048	3142	-233	6
chr11	33064710	33064711	chunk0034_222_1	18.7748	AR_DHT_Control	chr11	33064690	33064754	-102021868	-	L2c	LINE	L2	-30	3357	3295	6
chr11	33312940	33312941	chunk0034_227_1	5.24411	AR_DHT_Control	chr11	33312802	33313001	-101773621	-	MIRb	SINE	MIR	-46	222	14	6
chr11	33743860	33743861	chunk0034_234_1	6.21736	AR_DHT_Control	chr11	33743521	33743970	-101342652	+	L2a	LINE	L2	2879	3348	-78	6
chr11	33744761	33744762	chunk0034_235_1	24.45461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	33744760	33744949	-101341673	+	Charlie1a	DNA	hAT-Charlie	1271	1455	0	6
chr11	33796921	33796922	chunk0034_236_1	52.1237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	33796178	33797188	-101289434	+	L1MA2	LINE	L1	5573	6553	-249	6
chr11	34068360	34068361	chunk0034_239_1	12.0334	AR_DHT_Control	chr11	34067936	34068482	-101018140	-	MLT1G3	LTR	ERVL-MaLR	0	595	5	6
chr11	34418669	34418670	chunk0034_259_1	63.4298	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	34418529	34418749	-100667873	+	L1ME3G	LINE	L1	369	590	-334	6
chr11	34529847	34529848	chunk0034_265_1	27.30512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	34529825	34529882	-100556740	-	L2c	LINE	L2	0	3387	3331	6
chr11	34640127	34640128	chunk0034_279_1	165.833	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	34640005	34640263	-100446359	-	MIRb	SINE	MIR	-9	253	2	6
chr11	34671272	34671273	chunk0034_286_1	169.48074	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	34670787	34671297	-100415325	-	HAL1b	LINE	L1	-222	2199	1661	6
chr11	34676845	34676846	chunk0034_288_1	15.35761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	34676674	34676851	-100409771	+	MIRb	SINE	MIR	1	193	-75	6
chr11	34740585	34740586	chunk0034_289_1	35.9278	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	34737530	34742533	-100344089	+	L1P3	LINE	L1	8	5064	-1397	6
chr11	34874915	34874916	chunk0034_296_1	4.83532	AR_DHT_Control	chr11	34874729	34875209	-100211413	+	LTR1F	LTR	ERV1	1	475	-297	6
chr11	34911247	34911248	chunk0034_298_1	286.8202	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	34911166	34911262	-100175360	-	L2	LINE	L2	-2509	910	816	6
chr11	35061770	35061771	chunk0034_307_1	287.1472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	35061086	35061890	-100024732	+	L1ME3	LINE	L1	5273	6195	-249	6
chr11	35074384	35074385	chunk0034_310_1	8.58634	AR_DHT_Control	chr11	35074175	35074944	-100011678	+	L1ME1	LINE	L1	5835	6569	-1	6
chr11	35338109	35338110	chunk0034_328_1	199.6423	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	35338080	35338281	-99748341	+	MER58A	DNA	hAT-Charlie	1	222	-2	6
chr11	35391197	35391198	chunk0034_330_1	96.46639	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	35391091	35391311	-99695311	+	MER58A	DNA	hAT-Charlie	4	223	-1	6
chr11	35666156	35666157	chunk0034_337_1	18.292	AR_DHT_Control	chr11	35665886	35666617	-99420005	-	L1ME3B	LINE	L1	-881	5265	4378	6
chr11	35683647	35683648	chunk0034_338_1	8.02791	AR_DHT_Control	chr11	35683620	35683764	-99402858	+	MIRc	SINE	MIR	102	267	-1	6
chr11	35744217	35744218	chunk0034_343_1	33.6859	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	35744185	35744304	-99342318	-	MER53	DNA	hAT	0	193	73	6
chr11	35763503	35763504	chunk0034_347_1	30.7466	AR_DHT_Control	chr11	35763428	35763621	-99323001	+	MIR3	SINE	MIR	19	208	0	6
chr11	35901475	35901476	chunk0034_349_1	45.4725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	35900769	35901490	-99185132	+	L1ME3A	LINE	L1	5331	6125	-48	6
chr11	35969978	35969979	chunk0034_357_1	62.9111	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	35969946	35969981	-99116641	+	(TTTGGT)n	Simple_repeat	Simple_repeat	1	35	0	6
chr11	36318212	36318213	chunk0034_377_1	118.0925	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	36317961	36318290	-98768332	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	6
chr11	36396649	36396650	chunk0034_378_1	4.05799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	36396588	36396767	-98689855	-	MIR	SINE	MIR	-6	256	70	6
chr11	36737009	36737010	chunk0034_394_1	10.79134	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	36736023	36737707	-98348915	-	L1M3f	LINE	L1	-4601	2964	1247	6
chr11	37208205	37208206	chunk0034_398_1	22.0068	AR_DHT_Control	chr11	37204151	37211571	-97875051	-	L1PA7	LINE	L1	-102	6518	8	6
chr11	37224910	37224911	chunk0034_399_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	37223839	37225516	-97861106	-	MER52A	LTR	ERV1	0	1755	1	6
chr11	37364316	37364317	chunk0034_401_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	37363654	37366561	-97720061	+	L1PB3	LINE	L1	3	2004	-4859	6
chr11	37365188	37365189	chunk0034_402_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	37363654	37366561	-97720061	+	L1PB3	LINE	L1	3	2004	-4859	6
chr11	38019665	38019666	chunk0034_406_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	38018735	38024468	-97062154	+	L1PA13	LINE	L1	10	5942	-824	6
chr11	38041977	38041978	chunk0034_408_1	35.7986	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	38041691	38042172	-97044450	+	L1M5	LINE	L1	2131	2620	-3526	6
chr11	38185264	38185265	chunk0034_411_1	167.8234	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	38184586	38185440	-96901182	-	L1MC1	LINE	L1	-5	6328	5487	6
chr11	38254852	38254853	chunk0034_413_1	16.75879	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	38254762	38254968	-96831654	+	MLT1H2	LTR	ERVL-MaLR	30	252	-237	6
chr11	38380876	38380877	chunk0034_416_1	9.21264	AR_DHT_Control	chr11	38380784	38380898	-96705724	+	MIR3	SINE	MIR	4	141	-67	6
chr11	38449424	38449425	chunk0034_418_1	44.1983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	38449173	38450309	-96636313	+	L1PA16	LINE	L1	5007	6166	0	6
chr11	38496397	38496398	chunk0034_421_1	5.37222	AR_DHT_Control	chr11	38495865	38496474	-96590148	-	MER67B	LTR	ERV1	0	661	1	6
chr11	38533530	38533531	chunk0034_427_1	88.45385	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	38533108	38533775	-96552847	-	HERVL-int	LTR	ERVL	-781	4886	4236	6
chr11	38585888	38585889	chunk0034_428_1	10.1791	AR_DHT_Control	chr11	38585799	38585986	-96500636	+	MER115	DNA	hAT-Tip100	45	241	-452	6
chr11	38769370	38769371	chunk0034_430_1	8.46955	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	38768064	38770607	-96316015	+	L1PREC2	LINE	L1	13	2544	-4241	6
chr11	38785914	38785915	chunk0034_431_1	12.73	AR_DHT_Control	chr11	38785851	38786388	-96300234	-	L1M1	LINE	L1	-726	5579	5030	6
chr11	39195089	39195090	chunk0034_433_1	13.8104	AR_DHT_Control	chr11	39195030	39195470	-95891152	+	MLT1H	LTR	ERVL-MaLR	72	542	-7	6
chr11	39327384	39327385	chunk0034_437_1	33.1999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	39327328	39327728	-95758894	+	MER57B1	LTR	ERV1	1	401	0	6
chr11	39381298	39381299	chunk0034_438_1	4.06817	AR_DHT_Control	chr11	39381117	39382083	-95704539	-	LTR1D	LTR	ERV1	0	975	1	6
chr11	39409209	39409210	chunk0034_439_1	8.09329	AR_DHT_Control	chr11	39408976	39409624	-95676998	+	L1MA4	LINE	L1	4791	5439	-861	6
chr11	39445494	39445495	chunk0034_442_1	162.11898	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	39445379	39445802	-95640820	+	MER51B	LTR	ERV1	23	377	0	6
chr11	39463913	39463914	chunk0034_444_1	10.4825	AR_DHT_Control	chr11	39463890	39463933	-95622689	+	A-rich	Low_complexity	Low_complexity	1	43	0	6
chr11	39491550	39491551	chunk0034_446_1	40.8433	AR_DHT_Control	chr11	39491270	39491655	-95594967	-	L2c	LINE	L2	-31	3356	2970	6
chr11	39625545	39625546	chunk0034_449_1	62.7278	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	39625487	39625640	-95460982	+	MER58A	DNA	hAT-Charlie	9	164	-60	6
chr11	39707950	39707951	chunk0034_451_1	9.67383	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	39707913	39708004	-95378618	+	L2b	LINE	L2	3286	3375	0	6
chr11	39732229	39732230	chunk0034_452_1	15.23226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	39732019	39732311	-95354311	+	L2a	LINE	L2	3126	3421	-5	6
chr11	39777231	39777232	chunk0035_3_1	103.2104	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	39777070	39777360	-95309262	+	MLT1I	LTR	ERVL-MaLR	19	341	-208	6
chr11	39944294	39944295	chunk0035_7_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	39943917	39944864	-95141758	-	L1MA8	LINE	L1	-4650	2915	2008	6
chr11	39984808	39984809	chunk0035_8_1	55.706	AR_DHT_Control	chr11	39984014	39990193	-95096429	+	L1PA5	LINE	L1	4	6153	-1	6
chr11	40073940	40073941	chunk0035_9_1	13.97362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	40073585	40073951	-95012671	+	L2a	LINE	L2	3036	3422	-4	6
chr11	40230987	40230988	chunk0035_16_1	17.20551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	40230940	40231017	-94855605	+	L2b	LINE	L2	3207	3287	-88	6
chr11	40314023	40314024	chunk0035_20_1	12.168	AR_DHT_Control	chr11	40313912	40315182	-94771440	+	L1MA5A	LINE	L1	5050	6295	-2	6
chr11	40355109	40355110	chunk0035_23_1	4.83532	AR_DHT_Control	chr11	40353720	40355908	-94730714	-	L1MA3	LINE	L1	-5278	2287	17	6
chr11	40368977	40368978	chunk0035_24_1	5.6425	AR_DHT_Control	chr11	40368790	40369006	-94717616	+	MIRb	SINE	MIR	34	256	-12	6
chr11	40593196	40593197	chunk0035_29_1	58.7751	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	40593192	40593344	-94493278	+	X6A_LINE	LINE	CR1	931	1075	-5	6
chr11	40659661	40659662	chunk0035_31_1	8.24382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	40658852	40660449	-94426173	+	MER52A	LTR	ERV1	1	1755	0	6
chr11	40744138	40744139	chunk0035_34_1	20.6407	AR_DHT_Control	chr11	40744075	40744447	-94342175	-	L2a	LINE	L2	-28	3398	3006	6
chr11	40746340	40746341	chunk0035_35_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	40745914	40750019	-94336603	+	L1MA4A	LINE	L1	7	4222	-2623	6
chr11	40935919	40935920	chunk0035_40_1	29.56969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	40935818	40935959	-94150663	+	MIRc	SINE	MIR	39	203	-65	6
chr11	41283705	41283706	chunk0035_51_1	43.53562	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	41283439	41283755	-93802867	+	MER58B	DNA	hAT-Charlie	38	341	0	6
chr11	41401185	41401186	chunk0035_57_1	63.3046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	41401171	41401363	-93685259	-	MER3	DNA	hAT-Charlie	0	209	9	6
chr11	41545522	41545523	chunk0035_64_1	8.15319	AR_DHT_Control	chr11	41544729	41550920	-93535702	+	L1PA6	LINE	L1	1	6152	-2	6
chr11	41708633	41708634	chunk0035_65_1	66.96964	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	41708518	41708704	-93377918	+	MIRb	SINE	MIR	41	216	-52	6
chr11	41714112	41714113	chunk0035_67_1	5.60881	AR_DHT_Control	chr11	41713541	41714375	-93372247	-	MER21C	LTR	ERVL	-8	930	1	6
chr11	41779531	41779532	chunk0035_71_1	57.24022	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	41779189	41779615	-93307007	+	MER4C	LTR	ERV1	1	447	-18	6
chr11	41984197	41984198	chunk0035_81_1	119.87907	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	41984086	41984418	-93102204	-	L2c	LINE	L2	-42	3384	3011	6
chr11	42000767	42000768	chunk0035_84_1	30.2258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	42000625	42000846	-93085776	+	MER58A	DNA	hAT-Charlie	1	222	-2	6
chr11	42025627	42025628	chunk0035_87_1	81.3901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	42025514	42025905	-93060717	+	L1MA9	LINE	L1	5784	6175	-137	6
chr11	42035348	42035349	chunk0035_88_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	42035068	42035690	-93050932	-	L2	LINE	L2	-375	3044	2354	6
chr11	42098440	42098441	chunk0035_91_1	9.61425	AR_DHT_Control	chr11	42098247	42098496	-92988126	+	L2c	LINE	L2	3146	3426	0	6
chr11	42127750	42127751	chunk0035_92_1	12.4153	AR_DHT_Control	chr11	42127573	42128401	-92958221	+	L1MC1	LINE	L1	5429	6320	-13	6
chr11	42136400	42136401	chunk0035_93_1	27.1763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	42135496	42136839	-92949783	+	L1MEf	LINE	L1	2809	4306	-2338	6
chr11	42176797	42176798	chunk0035_95_1	8.9624	AR_DHT_Control	chr11	42176281	42176878	-92909744	+	L2b	LINE	L2	2720	3359	-16	6
chr11	42310851	42310852	chunk0035_98_1	94.0326	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42310489	42310965	-92775657	-	L1ME3A	LINE	L1	-22	6151	5650	6
chr11	42330164	42330165	chunk0035_103_1	31.29307	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	42330049	42330422	-92756200	+	MLT1C	LTR	ERVL-MaLR	10	465	-2	6
chr11	42340965	42340966	chunk0035_104_1	15.46172	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	42340960	42341048	-92745574	+	MIRb	SINE	MIR	99	192	-76	6
chr11	42499112	42499113	chunk0035_109_1	154.55062	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	42499076	42499250	-92587372	-	L2a	LINE	L2	-2	3424	3182	6
chr11	42552976	42552977	chunk0035_114_1	11.8271	AR_DHT_Control	chr11	42552725	42553123	-92533499	+	MLT2C1	LTR	ERVL	1	397	0	6
chr11	42570011	42570012	chunk0035_118_1	16.01368	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42570010	42570111	-92516511	+	MIRb	SINE	MIR	171	268	0	6
chr11	42615124	42615125	chunk0035_124_1	60.7675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42615103	42615163	-92471459	-	MIR3	SINE	MIR	-38	170	112	6
chr11	42724591	42724592	chunk0035_127_1	10.5973	AR_DHT_Control	chr11	42724412	42724743	-92361879	+	Tigger3a	DNA	TcMar-Tigger	5	348	0	6
chr11	42767183	42767184	chunk0035_131_1	41.8759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42767110	42767257	-92319365	-	MIR3	SINE	MIR	-41	167	8	6
chr11	42795063	42795064	chunk0035_134_1	74.8092	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42794807	42795309	-92291313	+	L1ME3G	LINE	L1	1	392	-532	6
chr11	42831186	42831187	chunk0035_137_1	36.2155	AR_DHT_Control	chr11	42831177	42831322	-92255300	-	AluJr	SINE	Alu	-17	295	149	6
chr11	42892283	42892284	chunk0035_143_1	12.67663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42891815	42892436	-92194186	+	L1MEd	LINE	L1	3541	4164	-1982	6
chr11	42951503	42951504	chunk0035_146_1	15.7	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	42951459	42951597	-92135025	+	MLT1H	LTR	ERVL-MaLR	411	549	0	6
chr11	42981001	42981002	chunk0035_147_1	9.01503	AR_DHT_Control	chr11	42980874	42981089	-92105533	-	MER58A	DNA	hAT-Charlie	0	224	1	6
chr11	43036643	43036644	chunk0035_149_1	18.99305	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	43036285	43036899	-92049723	-	L2a	LINE	L2	-16	3410	2723	6
chr11	43376856	43376857	chunk0035_157_1	7.58612	AR_DHT_Control	chr11	43376786	43377012	-91709610	-	Tigger3a	DNA	TcMar-Tigger	-3	345	79	6
chr11	43408489	43408490	chunk0035_158_1	55.181	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	43408437	43408511	-91678111	-	L2c	LINE	L2	-11	3415	3335	6
chr11	43490145	43490146	chunk0035_161_1	104.12794	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	43489942	43490152	-91596470	+	MIRb	SINE	MIR	50	256	-12	6
chr11	43846765	43846766	chunk0035_168_1	15.63635	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	43846739	43846845	-91239777	-	L2c	LINE	L2	-19	3368	3248	6
chr11	43995498	43995499	chunk0035_179_1	6.39934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	43995416	43995836	-91090786	-	L2b	LINE	L2	-61	3314	2856	6
chr11	44152184	44152185	chunk0035_185_1	17.3242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	44151070	44152365	-90934257	-	L1MC1	LINE	L1	-6	6502	5202	6
chr11	44157975	44157976	chunk0035_187_1	6.18774	AR_DHT_Control	chr11	44155320	44158345	-90928277	-	L1MA3	LINE	L1	-4006	3559	470	6
chr11	44202824	44202825	chunk0035_190_1	8.0668	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	44202676	44202911	-90883711	-	MIRb	SINE	MIR	-9	259	5	6
chr11	44209255	44209256	chunk0035_191_1	269.168	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	44209251	44209300	-90877322	+	L2a	LINE	L2	3279	3328	-98	6
chr11	44648212	44648213	chunk0035_201_1	12.4335	AR_DHT_Control	chr11	44648028	44648928	-90437694	+	L1ME1	LINE	L1	5346	6200	-152	6
chr11	44749338	44749339	chunk0035_207_1	17.0249	AR_DHT_Control	chr11	44749143	44749342	-90337280	+	MIRb	SINE	MIR	15	225	-43	6
chr11	44866264	44866265	chunk0035_209_1	101.8942	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	44866256	44866954	-90219668	-	MamGypLTR1b	LTR	Gypsy	-56	726	2	6
chr11	44940651	44940652	chunk0035_211_1	9.55513	AR_DHT_Control	chr11	44940267	44940934	-90145688	-	L1ME1	LINE	L1	-27	6152	5460	6
chr11	45063264	45063265	chunk0035_219_1	118.6773	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	45062892	45063551	-90023071	-	Tigger3	DNA	TcMar-Tigger	-2353	676	1	6
chr11	45147146	45147147	chunk0035_220_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	45147135	45147171	-89939451	+	(CTCCTCG)n	Simple_repeat	Simple_repeat	1	37	0	6
chr11	45160517	45160518	chunk0035_221_1	6.57411	AR_DHT_Control	chr11	45160293	45160636	-89925986	-	L1ME3G	LINE	L1	-14	910	583	6
chr11	45306109	45306110	chunk0035_222_1	39.8879	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	45305658	45306287	-89780335	-	L1ME1	LINE	L1	0	6179	5484	6
chr11	45554870	45554871	chunk0035_225_1	64.9426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	45554766	45554903	-89531719	+	L2b	LINE	L2	3266	3426	0	6
chr11	45766049	45766050	chunk0035_228_1	52.8377	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	45765987	45766171	-89320451	+	MLT1C	LTR	ERVL-MaLR	211	401	-66	6
chr11	45842242	45842243	chunk0035_230_1	12.3853	AR_DHT_Control	chr11	45841982	45842413	-89244209	-	MER83	LTR	ERV1	0	448	1	6
chr11	45843775	45843776	chunk0035_231_1	4.62486	AR_DHT_Control	chr11	45843747	45843851	-89242771	-	Plat_L3	LINE	CR1	-441	3145	3042	6
chr11	46052315	46052316	chunk0035_239_1	14.9872	AR_DHT_Control	chr11	46052053	46052459	-89034163	+	MLT1K	LTR	ERVL-MaLR	144	595	0	6
chr11	46140803	46140804	chunk0035_244_1	16.98481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46140613	46141213	-88945409	-	L1ME4a	LINE	L1	-1117	5029	4378	6
chr11	46171109	46171110	chunk0035_245_1	44.089	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46171052	46171439	-88915183	+	L1M5	LINE	L1	5271	5655	-587	6
chr11	46268131	46268132	chunk0035_249_1	125.41174	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46267812	46268242	-88818380	+	L1ME4b	LINE	L1	224	683	-209	6
chr11	46307493	46307494	chunk0035_254_1	14.2268	AR_DHT_Control	chr11	46307391	46307567	-88779055	-	MIRb	SINE	MIR	-10	252	82	6
chr11	46449244	46449245	chunk0035_257_1	5.47663	AR_DHT_Control	chr11	46448183	46449778	-88636844	+	L1MC1	LINE	L1	2714	4747	-1399	6
chr11	46690751	46690752	chunk0035_280_1	19.74136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	46690619	46690847	-88395775	+	L2c	LINE	L2	3100	3330	-57	6
chr11	46736827	46736828	chunk0035_284_1	42.2254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46736635	46737067	-88349555	-	L1MC4	LINE	L1	-1309	4905	4464	6
chr11	46782811	46782812	chunk0035_288_1	111.8529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46782579	46782820	-88303802	+	MIR	SINE	MIR	2	238	-24	6
chr11	46800916	46800917	chunk0035_289_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46800900	46800966	-88285656	+	(GTAA)n	Simple_repeat	Simple_repeat	1	69	0	6
chr11	46837613	46837614	chunk0035_290_1	10.8483	AR_DHT_Control	chr11	46836866	46838220	-88248402	+	L1MC3	LINE	L1	6106	7445	-340	6
chr11	46978131	46978132	chunk0035_295_1	25.6152	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46978083	46978386	-88108236	-	L2c	LINE	L2	-5	3382	3101	6
chr11	46988309	46988310	chunk0035_298_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	46987753	46988871	-88097751	+	L1MA1	LINE	L1	5184	6302	0	6
chr11	47046537	47046538	chunk0035_302_1	12.811	AR_DHT_Control	chr11	47046179	47046631	-88039991	+	L1MB4	LINE	L1	4149	4586	-1554	6
chr11	47189636	47189637	chunk0035_305_1	76.82121	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	47189543	47189652	-87896970	-	L2c	LINE	L2	-230	3157	3031	6
chr11	47204489	47204490	chunk0035_308_1	6.28518	AR_DHT_Control	chr11	47204314	47204502	-87882120	-	MamRTE1	LINE	RTE-BovB	-1214	2598	2408	6
chr11	47509477	47509478	chunk0035_322_1	6.48643	AR_DHT_Control	chr11	47509407	47509553	-87577069	+	AluJo	SINE	Alu	137	282	-30	6
chr11	47517387	47517388	chunk0035_323_1	20.36763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	47517275	47517491	-87569131	+	L1MC4a	LINE	L1	5606	5828	-2054	6
chr11	47553225	47553226	chunk0035_327_1	8.08101	AR_DHT_Control	chr11	47553220	47553291	-87533331	+	(GCGCCGA)n	Simple_repeat	Simple_repeat	1	77	0	6
chr11	47677824	47677825	chunk0035_331_1	122.35459	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	47677755	47677855	-87408767	-	L2c	LINE	L2	-1	3386	3294	6
chr11	47938519	47938520	chunk0035_333_1	6.37684	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	47938028	47938557	-87148065	+	L2a	LINE	L2	2845	3398	-28	6
chr11	48088438	48088439	chunk0035_350_1	10.9245	AR_DHT_Control	chr11	48087841	48088549	-86998073	-	LTR83	LTR	ERVL	-41	739	17	6
chr11	48453692	48453693	chunk0035_353_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	48448049	48454082	-86632540	-	L1PA7	LINE	L1	-242	5912	18	6
chr11	48454256	48454257	chunk0035_354_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	48454077	48454396	-86632226	-	L1P4d	LINE	L1	-3616	3296	2985	6
chr11	48993624	48993625	chunk0035_355_1	23.4743	AR_DHT_Control	chr11	48993405	48993674	-86092948	-	Tigger3a	DNA	TcMar-Tigger	-50	298	22	6
chr11	49160223	49160224	chunk0035_359_1	33.6876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49160082	49160443	-85926179	-	L1PA10	LINE	L1	-2749	4832	4469	6
chr11	49165353	49165354	chunk0035_361_1	85.58788	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49164854	49165393	-85921229	+	L2a	LINE	L2	2791	3426	0	6
chr11	49168229	49168230	chunk0035_362_1	83.034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	49168213	49168319	-85918303	-	L2b	LINE	L2	-229	3146	3036	6
chr11	49172546	49172547	chunk0035_364_1	11.9286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49172405	49172623	-85913999	+	MIRc	SINE	MIR	32	248	-20	6
chr11	49195337	49195338	chunk0035_366_1	6.00544	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49194739	49195873	-85890749	+	L1M5	LINE	L1	2286	3454	-2692	6
chr11	49195700	49195701	chunk0035_367_1	11.206	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49194739	49195873	-85890749	+	L1M5	LINE	L1	2286	3454	-2692	6
chr11	49196400	49196401	chunk0035_368_1	5.37017	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	49196315	49196900	-85889722	+	L1M5	LINE	L1	3474	4152	-1994	6
chr11	55263271	55263272	chunk0035_380_1	168.21362	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	55263092	55263375	-79823247	+	Tigger3a	DNA	TcMar-Tigger	1	294	-54	6
chr11	55442974	55442975	chunk0035_383_1	110.8553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr11	55442865	55443078	-79643544	-	MIR	SINE	MIR	-2	260	3	6
chr11	55474525	55474526	chunk0035_385_1	33.4851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	55474441	55474658	-79611964	-	MIR	SINE	MIR	0	262	3	6
chr11	55545184	55545185	chunk0035_386_1	15.3744	AR_DHT_Control	chr11	55544518	55545686	-79540936	+	FordPrefect	DNA	hAT-Tip100	69	1287	-396	6
chr11	56180623	56180624	chunk0035_387_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	56180319	56181080	-78905542	+	L1MDa	LINE	L1	225	1068	-5565	6
chr11	56260843	56260844	chunk0035_388_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	56259458	56261052	-78825570	-	MER52A	LTR	ERV1	0	1755	1	6
chr11	56351122	56351123	chunk0035_389_1	5.24411	AR_DHT_Control	chr11	56350640	56351307	-78735315	+	L1ME2	LINE	L1	5266	5977	-187	6
chr11	56539219	56539220	chunk0035_393_1	67.847	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	56538901	56539244	-78547378	+	L2a	LINE	L2	3061	3422	-4	6
chr11	56641073	56641074	chunk0035_394_1	26.16844	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	56640781	56641177	-78445445	+	LTR16	LTR	ERVL	31	437	-1	6
chr11	56666775	56666776	chunk0035_396_1	22.24958	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	56666717	56666859	-78419763	+	L1MA1	LINE	L1	5801	5937	-368	6
chr11	56694054	56694055	chunk0035_399_1	26.79822	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	56694032	56694283	-78392339	-	L2a	LINE	L2	-74	3352	3102	6
chr11	56706644	56706645	chunk0035_402_1	8.68286	AR_DHT_Control	chr11	56704668	56709398	-78377224	+	L1PBb	LINE	L1	56	4034	-2881	6
chr11	56716563	56716564	chunk0035_403_1	30.861	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	56715620	56716788	-78369834	+	Tigger3b	DNA	TcMar-Tigger	2	1231	0	6
chr11	56801731	56801732	chunk0035_407_1	14.6324	AR_DHT_Control	chr11	56801707	56801782	-78284840	-	L2a	LINE	L2	-5	3421	3342	6
chr11	56967935	56967936	chunk0035_411_1	51.3027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	56967207	56969514	-78117108	-	L1PA11	LINE	L1	-4253	3350	11	6
chr11	56974944	56974945	chunk0035_413_1	10.1096	AR_DHT_Control	chr11	56974221	56975187	-78111435	+	L1PA16	LINE	L1	5179	6165	-1	6
chr11	57083784	57083785	chunk0035_415_1	47.92898	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	57083617	57083808	-78002814	-	LTR42	LTR	ERVL	-305	190	1	6
chr11	57102051	57102052	chunk0035_417_1	76.142	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	57101998	57102229	-77984393	+	L3	LINE	CR1	3093	3330	-769	6
chr11	57121667	57121668	chunk0035_420_1	7.38582	AR_DHT_Control	chr11	57121416	57122135	-77964487	+	MER21C	LTR	ERVL	222	936	-2	6
chr11	57345402	57345403	chunk0035_434_1	6.65967	AR_DHT_Control	chr11	57345288	57345411	-77741211	+	MER103C	DNA	hAT-Charlie	1	132	-165	6
chr11	57478075	57478076	chunk0035_438_1	39.9329	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	57477930	57478122	-77608500	-	MER91A	DNA	hAT-Tip100	-3	193	1	6
chr11	57569530	57569531	chunk0035_443_1	10.9345	AR_DHT_Control	chr11	57569252	57569578	-77517044	-	L2c	LINE	L2	-27	3360	3028	6
chr11	57839282	57839283	chunk0036_2_1	82.8013	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	57839278	57839306	-77247316	+	A-rich	Low_complexity	Low_complexity	1	28	0	6
chr11	58030820	58030821	chunk0036_6_1	7.73888	AR_DHT_Control	chr11	58030534	58030830	-77055792	+	L2c	LINE	L2	2993	3318	-69	6
chr11	58165695	58165696	chunk0036_8_1	7.12934	AR_DHT_Control	chr11	58165469	58165709	-76920913	+	L2b	LINE	L2	3152	3382	-5	6
chr11	58239927	58239928	chunk0036_15_1	70.1748	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	58239615	58241420	-76845202	-	L1MA4	LINE	L1	-11	7708	5873	6
chr11	58296618	58296619	chunk0036_16_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	58296522	58296745	-76789877	+	MIR	SINE	MIR	1	262	0	6
chr11	58430953	58430954	chunk0036_21_1	66.2983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	58428355	58433905	-76652717	+	L1PB4	LINE	L1	1970	7432	-143	6
chr11	58449455	58449456	chunk0036_24_1	33.009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	58449355	58450133	-76636489	+	L1PA16	LINE	L1	4970	5747	-419	6
chr11	58458652	58458653	chunk0036_26_1	6.48643	AR_DHT_Control	chr11	58458177	58460232	-76626390	+	L1MA8	LINE	L1	5747	7710	0	6
chr11	58632824	58632825	chunk0036_31_1	7.11634	AR_DHT_Control	chr11	58632722	58632965	-76453657	-	MER90a	LTR	ERV1	0	614	361	6
chr11	58708853	58708854	chunk0036_35_1	13.77165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	58708802	58708873	-76377749	+	MLT1A1	LTR	ERVL-MaLR	293	390	-18	6
chr11	58750357	58750358	chunk0036_36_1	20.6373	AR_DHT_Control	chr11	58749636	58752103	-76334519	+	L1PA6	LINE	L1	1	2466	-3680	6
chr11	58833630	58833631	chunk0036_38_1	32.8041	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	58833337	58833815	-76252807	+	MLT1D	LTR	ERVL-MaLR	8	505	0	6
chr11	58926484	58926485	chunk0036_40_1	143.49693	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	58925598	58926638	-76159984	-	HERVK22-int	LTR	ERVK	-2013	4824	3676	6
chr11	58989264	58989265	chunk0036_42_1	21.2204	AR_DHT_Control	chr11	58983951	58990073	-76096549	-	L1PA6	LINE	L1	-4	6150	5	6
chr11	59012957	59012958	chunk0036_45_1	6.41766	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	59011514	59015268	-76071354	+	L1M1	LINE	L1	13	3815	-3750	6
chr11	59014533	59014534	chunk0036_46_1	115.4434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	59011514	59015268	-76071354	+	L1M1	LINE	L1	13	3815	-3750	6
chr11	59025428	59025429	chunk0036_49_1	129.3871	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	59025373	59025482	-76061140	-	MLT1B	LTR	ERVL-MaLR	-269	121	3	6
chr11	59045814	59045815	chunk0036_53_1	5.6425	AR_DHT_Control	chr11	59045648	59046130	-76040492	-	L1ME3G	LINE	L1	-408	516	4	6
chr11	59154787	59154788	chunk0036_56_1	18.246	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	59154704	59155134	-75931488	+	LTR47A2	LTR	ERVL	1	432	0	6
chr11	59156203	59156204	chunk0036_58_1	23.18458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	59155881	59156304	-75930318	+	Tigger17a	DNA	TcMar-Tigger	237	654	0	6
chr11	59273553	59273554	chunk0036_59_1	28.3574	AR_DHT_Control	chr11	59273418	59274048	-75812574	+	LTR77	LTR	ERV1	1	622	0	6
chr11	59617948	59617949	chunk0036_63_1	58.5375	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	59617826	59618458	-75468164	+	L1MC5a	LINE	L1	1995	2633	-144	6
chr11	59678313	59678314	chunk0036_66_1	10.57055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	59678223	59678632	-75407990	-	MLT1D	LTR	ERVL-MaLR	-74	431	6	6
chr11	59762055	59762056	chunk0036_68_1	6.8205	AR_DHT_Control	chr11	59761825	59762162	-75324460	-	L1MD3	LINE	L1	0	7995	7658	6
chr11	59784984	59784985	chunk0036_72_1	12.3188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	59784951	59785060	-75301562	+	MIRc	SINE	MIR	20	147	-121	6
chr11	59979973	59979974	chunk0036_74_1	7.36432	AR_DHT_Control	chr11	59979597	59980289	-75106333	-	MER67C	LTR	ERV1	0	711	1	6
chr11	60247100	60247101	chunk0036_75_1	8.52761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	60246798	60248072	-74838550	+	L1PA14	LINE	L1	624	1863	-4826	6
chr11	60625329	60625330	chunk0036_79_1	30.28662	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	60625212	60625919	-74460703	+	L1MA9	LINE	L1	4618	5398	-775	6
chr11	60729235	60729236	chunk0036_83_1	13.78363	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	60729214	60729251	-74357371	+	(ATGAAG)n	Simple_repeat	Simple_repeat	1	40	0	6
chr11	60745081	60745082	chunk0036_84_1	103.8198	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	60744434	60745170	-74341452	+	L1ME1	LINE	L1	5052	5834	-345	6
chr11	60844860	60844861	chunk0036_87_1	5.09613	AR_DHT_Control	chr11	60844845	60845426	-74241196	-	L2a	LINE	L2	-1	3386	2725	6
chr11	60866743	60866744	chunk0036_88_1	70.68599	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	60866696	60866936	-74219686	-	L1MC3	LINE	L1	-13	7772	7514	6
chr11	60881037	60881038	chunk0036_92_1	100.872	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	60880866	60881081	-74205541	+	L2c	LINE	L2	3036	3290	-97	6
chr11	60893585	60893586	chunk0036_95_1	193.4837	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	60893556	60893672	-74192950	-	Tigger1	DNA	TcMar-Tigger	0	2418	2310	6
chr11	60913092	60913093	chunk0036_96_1	7.10145	AR_DHT_Control	chr11	60912641	60913600	-74173022	-	LTR1D	LTR	ERV1	0	975	3	6
chr11	61034314	61034315	chunk0036_99_1	4.9245	AR_DHT_Control	chr11	61034086	61034391	-74052231	+	LTR84b	LTR	ERVL	6	333	-428	6
chr11	61319936	61319937	chunk0036_107_1	54.80184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	61319904	61320189	-73766433	-	L1MC4a	LINE	L1	-1651	4492	4202	6
chr11	61375818	61375819	chunk0036_109_1	13.5471	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	61375621	61376066	-73710556	+	MER4-int	LTR	ERV1	5468	5906	-692	6
chr11	62050706	62050707	chunk0036_141_1	88.95969	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	62050223	62052820	-73033802	-	HERVK3-int	LTR	ERVK	-2	7200	4595	6
chr11	62176875	62176876	chunk0036_145_1	62.2572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	62176807	62177114	-72909508	-	L1MA6	LINE	L1	-362	5938	5647	6
chr11	62180193	62180194	chunk0036_146_1	74.2949	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	62180169	62183069	-72903553	-	L1PA13	LINE	L1	-815	5951	3012	6
chr11	62186412	62186413	chunk0036_147_1	33.5059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	62186166	62186494	-72900128	-	L1PA13	LINE	L1	-5188	1597	1267	6
chr11	62238421	62238422	chunk0036_150_1	7.47392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	62238361	62238474	-72848148	-	L2b	LINE	L2	0	3375	3253	6
chr11	62342290	62342291	chunk0036_155_1	85.59855	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	62341911	62342496	-72744126	-	LTR10C	LTR	ERV1	0	591	1	6
chr11	62354137	62354138	chunk0036_156_1	5.6425	AR_DHT_Control	chr11	62354045	62354189	-72732433	-	MIR	SINE	MIR	-10	252	103	6
chr11	62369241	62369242	chunk0036_157_1	34.73482	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	62368490	62369451	-72717171	-	LTR5_Hs	LTR	ERVK	0	968	1	6
chr11	62370914	62370915	chunk0036_158_1	12.0219	AR_DHT_Control	chr11	62369544	62370999	-72715623	-	HERVK-int	LTR	ERVK	-95	7441	5984	6
chr11	62468929	62468930	chunk0036_160_1	38.7063	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	62468813	62468990	-72617632	+	LTR54	LTR	ERV1	293	469	-41	6
chr11	62508493	62508494	chunk0036_161_1	191.8695	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	62508278	62508507	-72578115	+	MIRc	SINE	MIR	40	265	-3	6
chr11	62509895	62509896	chunk0036_165_1	35.6615	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	62509660	62509935	-72576687	+	AluSx1	SINE	Alu	27	300	-12	6
chr11	62621460	62621461	chunk0036_177_1	5.58563	AR_DHT_Control	chr11	62621149	62621731	-72464891	-	L2a	LINE	L2	0	3426	2828	6
chr11	62860995	62860996	chunk0036_185_1	9.28589	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	62860433	62861082	-72225540	-	LTR5B	LTR	ERVK	-376	626	1	6
chr11	62939387	62939388	chunk0036_189_1	43.5156	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	62939236	62939458	-72147164	-	L1ME5	LINE	L1	-8	6186	5955	6
chr11	63132677	63132678	chunk0036_191_1	15.2872	AR_DHT_Control	chr11	63130814	63133447	-71953175	-	L1PA7	LINE	L1	-3536	2610	5	6
chr11	63144675	63144676	chunk0036_192_1	23.91737	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	63144593	63144697	-71941925	-	L2c	LINE	L2	-92	3295	3184	6
chr11	63280991	63280992	chunk0036_200_1	28.9956	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	63279559	63282209	-71804413	-	L1M2	LINE	L1	-2579	4983	2289	6
chr11	63495245	63495246	chunk0036_204_1	22.24509	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	63494979	63495355	-71591267	+	MER57B2	LTR	ERV1	1	403	0	6
chr11	63511567	63511568	chunk0036_207_1	7.73888	AR_DHT_Control	chr11	63511356	63511582	-71575040	-	L2b	LINE	L2	-1	3374	3142	6
chr11	64106445	64106446	chunk0036_230_1	26.85954	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	64106388	64106544	-70980078	-	L2a	LINE	L2	-1	3425	3192	6
chr11	64229072	64229073	chunk0036_235_1	13.9547	AR_DHT_Control	chr11	64229027	64229154	-70857468	+	MIR1_Amn	SINE	MIR	84	212	-18	6
chr11	64378440	64378441	chunk0036_242_1	59.55741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	64378303	64378594	-70708028	-	L1ME4a	LINE	L1	-298	5826	5536	6
chr11	64505106	64505107	chunk0036_250_1	10.0617	AR_DHT_Control	chr11	64505003	64505433	-70581189	+	MER70B	LTR	ERVL	1	445	-133	6
chr11	64561399	64561400	chunk0036_252_1	29.51156	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	64561287	64561445	-70525177	-	MIR	SINE	MIR	-75	187	25	6
chr11	64785115	64785116	chunk0036_256_1	31.17458	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	64784827	64785404	-70301218	+	L1ME1	LINE	L1	5599	6179	0	6
chr11	65104374	65104375	chunk0036_264_1	8.38847	AR_DHT_Control	chr11	65104237	65105002	-69981620	-	L1M4	LINE	L1	-1922	4224	3386	6
chr11	65104715	65104716	chunk0036_266_1	12.22092	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	65104237	65105002	-69981620	-	L1M4	LINE	L1	-1922	4224	3386	6
chr11	65429165	65429166	chunk0036_285_1	4.67596	AR_DHT_Control	chr11	65428987	65429477	-69657145	-	L1ME4a	LINE	L1	-251	5873	5367	6
chr11	65467837	65467838	chunk0036_287_1	37.97516	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	65467720	65467998	-69618624	+	L1MD1	LINE	L1	5602	5894	-348	6
chr11	65560201	65560202	chunk0036_293_1	7.06178	AR_DHT_Control	chr11	65559963	65560213	-69526409	-	L2c	LINE	L2	-4	3383	3093	6
chr11	65922958	65922959	chunk0036_301_1	6.39934	AR_DHT_Control	chr11	65922642	65923020	-69163602	+	L1ME3	LINE	L1	5483	5899	-263	6
chr11	65928053	65928054	chunk0036_302_1	12.9925	AR_DHT_Control	chr11	65927907	65928113	-69158509	-	L2a	LINE	L2	0	3426	3179	6
chr11	66004675	66004676	chunk0036_306_1	16.02789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	66004647	66004760	-69081862	-	AluJr4	SINE	Alu	-176	136	1	6
chr11	66072026	66072027	chunk0036_308_1	10.8241	AR_DHT_Control	chr11	66071930	66072475	-69014147	-	L1ME3E	LINE	L1	-106	6136	5565	6
chr11	66084281	66084282	chunk0036_309_1	6.86821	AR_DHT_Control	chr11	66083935	66084711	-69001911	-	L2a	LINE	L2	-2	3424	2545	6
chr11	66123964	66123965	chunk0036_311_1	10.0059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	66123820	66123991	-68962631	+	Tigger1	DNA	TcMar-Tigger	2225	2409	-9	6
chr11	66186654	66186655	chunk0036_319_1	117.7176	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	66186353	66186678	-68899944	+	L2a	LINE	L2	2993	3395	-31	6
chr11	66373438	66373439	chunk0036_327_1	149.5453	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	66373372	66373500	-68713122	-	L2c	LINE	L2	-296	3091	2957	6
chr11	66694938	66694939	chunk0036_334_1	5.03761	AR_DHT_Control	chr11	66694711	66694985	-68391637	+	LTR41C	LTR	ERVL	1	271	-430	6
chr11	66782784	66782785	chunk0036_343_1	7.22694	AR_DHT_Control	chr11	66782365	66782786	-68303836	-	L1MEf	LINE	L1	-5938	462	34	6
chr11	66877597	66877598	chunk0036_350_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	66877564	66877808	-68208814	+	L1ME4a	LINE	L1	5614	5887	-237	6
chr11	66887171	66887172	chunk0036_351_1	9.25272	AR_DHT_Control	chr11	66887057	66887739	-68198883	+	HAL1	LINE	L1	595	1342	-1165	6
chr11	66935147	66935148	chunk0036_357_1	12.8687	AR_DHT_Control	chr11	66935029	66935154	-68151468	+	L2b	LINE	L2	3241	3374	-1	6
chr11	66985975	66985976	chunk0036_361_1	120.9617	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	66985839	66986008	-68100614	+	MIRb	SINE	MIR	88	254	-14	6
chr11	67091798	67091799	chunk0036_363_1	13.2288	AR_DHT_Control	chr11	67091731	67091875	-67994747	-	L1PA8	LINE	L1	0	6172	6033	6
chr11	67136833	67136834	chunk0036_366_1	16.28791	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	67136788	67137135	-67949487	-	L2c	LINE	L2	-33	3354	3002	6
chr11	67177829	67177830	chunk0036_367_1	7.14391	AR_DHT_Control	chr11	67177272	67178021	-67908601	-	Tigger3b	DNA	TcMar-Tigger	-485	746	1	6
chr11	67465429	67465430	chunk0036_375_1	12.3978	AR_DHT_Control	chr11	67465317	67465595	-67621027	-	L2c	LINE	L2	-1	3386	3076	6
chr11	67513088	67513089	chunk0036_377_1	223.0285	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	67512897	67513226	-67573396	+	L1MC3	LINE	L1	5433	5766	-2019	6
chr11	67521300	67521301	chunk0036_379_1	4.96282	AR_DHT_Control	chr11	67521269	67521333	-67565289	+	L2b	LINE	L2	3022	3091	-335	6
chr11	67548721	67548722	chunk0036_380_1	22.70046	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	67548606	67548744	-67537878	-	L1ME3	LINE	L1	-1	6161	6027	6
chr11	67582547	67582548	chunk0036_382_1	21.94401	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	67582471	67582653	-67503969	+	L1M5	LINE	L1	5132	5320	-826	6
chr11	67637695	67637696	chunk0036_385_1	27.35165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	67637281	67637873	-67448749	-	LTR10C	LTR	ERV1	0	591	1	6
chr11	67649763	67649764	chunk0036_386_1	8.3176	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	67649523	67649951	-67436671	+	(GT)n	Simple_repeat	Simple_repeat	1	431	0	6
chr11	67657971	67657972	chunk0036_387_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	67657617	67658123	-67428499	+	MER101-int	LTR	ERV1	3302	3804	-2835	6
chr11	67677596	67677597	chunk0036_390_1	9.58976	AR_DHT_Control	chr11	67676231	67678578	-67408044	+	L1PB1	LINE	L1	2762	5099	-1047	6
chr11	67682299	67682300	chunk0036_391_1	7.74912	AR_DHT_Control	chr11	67681786	67682660	-67403962	-	MER11D	LTR	ERVK	0	897	1	6
chr11	67689092	67689093	chunk0036_394_1	80.6606	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	67688961	67689253	-67397369	+	L1MB5	LINE	L1	5809	6062	-122	6
chr11	67703937	67703938	chunk0036_395_1	4.06817	AR_DHT_Control	chr11	67702471	67705289	-67381333	+	HERVK11-int	LTR	ERVK	5125	7953	0	6
chr11	68138546	68138547	chunk0036_410_1	96.0944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	68138429	68138749	-66947873	+	L1ME3	LINE	L1	5787	6107	-55	6
chr11	68192234	68192235	chunk0036_416_1	7.38582	AR_DHT_Control	chr11	68192189	68192286	-66894336	+	Tigger3d	DNA	TcMar-Tigger	229	320	-1	6
chr11	68296570	68296571	chunk0036_420_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	68296507	68296613	-66790009	+	MIRb	SINE	MIR	66	178	-90	6
chr11	68408521	68408522	chunk0036_431_1	6.8205	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	68408415	68408565	-66678057	-	L1ME4a	LINE	L1	-3	6121	5966	6
chr11	68469352	68469353	chunk0036_433_1	6.8205	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	68469295	68469353	-66617269	-	AluSz6	SINE	Alu	-10	302	233	6
chr11	68480429	68480430	chunk0036_434_1	161.9524	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	68480363	68480484	-66606138	-	L2a	LINE	L2	-9	3417	3288	6
chr11	68498544	68498545	chunk0036_437_1	6.16169	AR_DHT_Control	chr11	68498492	68499136	-66587486	-	L1ME3A	LINE	L1	-151	6022	5292	6
chr11	68579574	68579575	chunk0036_448_1	12.56799	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	68579523	68579674	-66506948	-	L2a	LINE	L2	0	3426	3261	6
chr11	68673891	68673892	chunk0036_454_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	68673622	68673998	-66412624	+	MLT1G1	LTR	ERVL-MaLR	138	549	0	6
chr11	68857738	68857739	chunk0037_5_1	6.48643	AR_DHT_Control	chr11	68857309	68857788	-66228834	-	L1ME4b	LINE	L1	-61	831	315	6
chr11	68877739	68877740	chunk0037_6_1	10.83797	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	68877483	68878073	-66208549	-	MER4B-int	LTR	ERV1	-2772	3986	3396	6
chr11	68982889	68982890	chunk0037_15_1	41.6048	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	68981980	68983363	-66103259	-	L1ME2z	LINE	L1	-561	5883	4467	6
chr11	69223216	69223217	chunk0037_19_1	10.5451	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	69222824	69224833	-65861789	-	L1MD1	LINE	L1	-5	6628	4555	6
chr11	69368689	69368690	chunk0037_22_1	14.6324	AR_DHT_Control	chr11	69368652	69368970	-65717652	-	L1ME3D	LINE	L1	-39	6203	5880	6
chr11	69507964	69507965	chunk0037_23_1	24.18517	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	69507585	69508152	-65578470	-	L1MB7	LINE	L1	-1781	4365	3934	6
chr11	70247939	70247940	chunk0037_36_1	24.4467	AR_DHT_Control	chr11	70247919	70248103	-64838519	-	L2b	LINE	L2	-223	3152	2965	6
chr11	70301118	70301119	chunk0037_39_1	36.1577	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	70301071	70301262	-64785360	+	MIRb	SINE	MIR	50	247	-21	6
chr11	70371413	70371414	chunk0037_44_1	21.7951	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	70371121	70371431	-64715191	-	L1MD	LINE	L1	-3227	2919	2548	6
chr11	70402861	70402862	chunk0037_45_1	30.9337	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	70402309	70403182	-64683440	-	L1MB7	LINE	L1	-9	6175	5283	6
chr11	70517285	70517286	chunk0037_50_1	16.67428	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	70517063	70518034	-64568588	+	L1MC2	LINE	L1	5326	6335	-9	6
chr11	70740219	70740220	chunk0037_53_1	234.8993	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	70740146	70740235	-64346387	+	L2a	LINE	L2	3345	3424	-2	6
chr11	70753251	70753252	chunk0037_56_1	97.8697	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	70753142	70753434	-64333188	+	L1MEf	LINE	L1	2888	3141	-3403	6
chr11	71229180	71229181	chunk0037_76_1	89.76494	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	71228763	71229487	-63857135	+	L1MD1	LINE	L1	4076	4793	-1744	6
chr11	71296733	71296734	chunk0037_80_1	8.52187	AR_DHT_Control	chr11	71296606	71297224	-63789398	+	L1MC1	LINE	L1	5432	6024	-309	6
chr11	71464423	71464424	chunk0037_86_1	44.7901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	71464222	71464585	-63622037	-	MER51B	LTR	ERV1	0	377	50	6
chr11	71580173	71580174	chunk0037_87_1	10.7541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	71580108	71580226	-63506396	-	HAL1M8	LINE	L1	-2071	920	803	6
chr11	71679504	71679505	chunk0037_88_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	71679239	71679516	-63407106	-	L1MA4	LINE	L1	-927	5219	4945	6
chr11	71679504	71679505	chunk0037_88_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	71679500	71679942	-63406680	-	L1M2	LINE	L1	-940	6622	6168	6
chr11	71958403	71958404	chunk0037_93_1	49.8472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	71957861	71958537	-63128085	+	L3	LINE	CR1	3279	3972	-127	6
chr11	72066553	72066554	chunk0037_99_1	12.50879	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	72066335	72066877	-63019745	+	L2c	LINE	L2	2809	3385	-2	6
chr11	72092826	72092827	chunk0037_102_1	6.26854	AR_DHT_Control	chr11	72092059	72093069	-62993553	+	L2c	LINE	L2	2184	3365	-22	6
chr11	72208395	72208396	chunk0037_106_1	10.5451	AR_DHT_Control	chr11	72208280	72209123	-62877499	+	L1MB2	LINE	L1	703	1549	-5104	6
chr11	72266148	72266149	chunk0037_108_1	14.9157	AR_DHT_Control	chr11	72265712	72266359	-62820263	-	HAL1	LINE	L1	-1479	1028	350	6
chr11	72272117	72272118	chunk0037_109_1	67.4477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	72271381	72272561	-62814061	-	L1MC2	LINE	L1	-2	6342	5127	6
chr11	72359261	72359262	chunk0037_112_1	39.74213	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	72359191	72359464	-62727158	-	L2c	LINE	L2	-9	3378	3078	6
chr11	72381461	72381462	chunk0037_113_1	5.40567	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	72380978	72383242	-62703380	+	L1M3e	LINE	L1	460	3035	-4531	6
chr11	72442121	72442122	chunk0037_115_1	10.1791	AR_DHT_Control	chr11	72441734	72442147	-62644475	-	MLT1E1A	LTR	ERVL-MaLR	-188	492	1	6
chr11	72565874	72565875	chunk0037_117_1	8.02791	AR_DHT_Control	chr11	72564989	72566137	-62520485	-	L1M5	LINE	L1	-1583	4563	3374	6
chr11	72778124	72778125	chunk0037_119_1	7.34658	AR_DHT_Control	chr11	72778024	72778177	-62308445	+	MIR1_Amn	SINE	MIR	60	209	-59	6
chr11	72862977	72862978	chunk0037_124_1	11.4842	AR_DHT_Control	chr11	72862933	72863226	-62223396	-	AluJr4	SINE	Alu	-20	292	1	6
chr11	73069749	73069750	chunk0037_132_1	23.2688	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	73069332	73069834	-62016788	+	L1MEi	LINE	L1	766	1256	-956	6
chr11	73233907	73233908	chunk0037_142_1	44.8393	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	73233787	73233960	-61852662	-	MER58A	DNA	hAT-Charlie	-9	215	1	6
chr11	73255411	73255412	chunk0037_144_1	25.7533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	73255323	73255592	-61831030	-	L1ME4b	LINE	L1	0	892	592	6
chr11	73461513	73461514	chunk0037_147_1	6.48643	AR_DHT_Control	chr11	73461419	73461521	-61625101	+	MIR3	SINE	MIR	82	187	-21	6
chr11	73558901	73558902	chunk0037_153_1	17.4573	AR_DHT_Control	chr11	73558492	73559126	-61527496	+	L1MB5	LINE	L1	5199	5831	-343	6
chr11	73675610	73675611	chunk0037_161_1	10.9705	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	73675339	73675627	-61410995	-	L1MEh	LINE	L1	-1953	282	5	6
chr11	73820630	73820631	chunk0037_166_1	86.54053	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	73820522	73820702	-61265920	+	L2b	LINE	L2	2939	3115	-272	6
chr11	73996713	73996714	chunk0037_172_1	242.2531	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	73996564	73996895	-61089727	-	L1ME3A	LINE	L1	-7	6166	5811	6
chr11	74035480	74035481	chunk0037_175_1	100.3162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74035294	74035578	-61051044	+	L2c	LINE	L2	3048	3391	-35	6
chr11	74071149	74071150	chunk0037_178_1	64.54552	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	74070756	74071175	-61015447	+	L2c	LINE	L2	2925	3341	-46	6
chr11	74080039	74080040	chunk0037_180_1	97.8199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	74079893	74080047	-61006575	-	MER58A	DNA	hAT-Charlie	-26	198	43	6
chr11	74086611	74086612	chunk0037_183_1	69.622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74086135	74086667	-60999955	-	MER90	LTR	ERV1	0	575	1	6
chr11	74146106	74146107	chunk0037_188_1	16.33005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74145972	74146710	-60939912	+	Charlie8	DNA	hAT-Charlie	461	1264	-1164	6
chr11	74184740	74184741	chunk0037_190_1	19.1049	AR_DHT_Control	chr11	74184724	74184890	-60901732	+	L2b	LINE	L2	3226	3371	-4	6
chr11	74270583	74270584	chunk0037_191_1	6.69935	AR_DHT_Control	chr11	74270550	74270813	-60815809	-	MIR	SINE	MIR	-11	251	4	6
chr11	74284058	74284059	chunk0037_193_1	11.45701	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74283460	74284066	-60802556	+	L2a	LINE	L2	2755	3424	-2	6
chr11	74302712	74302713	chunk0037_194_1	11.6878	AR_DHT_Control	chr11	74302698	74302772	-60783850	+	L2b	LINE	L2	3284	3420	-6	6
chr11	74312540	74312541	chunk0037_195_1	40.19099	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	74312393	74312766	-60773856	-	L2c	LINE	L2	-1	3386	2976	6
chr11	74325547	74325548	chunk0037_197_1	4.39832	AR_DHT_Control	chr11	74325419	74325569	-60761053	+	L2-1_AMi	LINE	L2	380	530	-705	6
chr11	74442876	74442877	chunk0037_205_1	9.90633	AR_DHT_Control	chr11	74442724	74442960	-60643662	-	L2c	LINE	L2	-2	3385	3146	6
chr11	74532671	74532672	chunk0037_207_1	8.27376	AR_DHT_Control	chr11	74532105	74532914	-60553708	-	L1MEc	LINE	L1	-5174	1226	339	6
chr11	74546941	74546942	chunk0037_208_1	6.84874	AR_DHT_Control	chr11	74546482	74546982	-60539640	-	LTR32	LTR	ERVL	0	457	1	6
chr11	74648563	74648564	chunk0037_210_1	54.04462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74648455	74648809	-60437813	-	L2c	LINE	L2	-197	3190	2787	6
chr11	74657975	74657976	chunk0037_211_1	17.77368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74656597	74658050	-60428572	-	L1M1	LINE	L1	-3233	4332	2621	6
chr11	74663597	74663598	chunk0037_212_1	22.7053	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	74663210	74664443	-60422179	+	L1MEc	LINE	L1	4645	5992	-345	6
chr11	74773517	74773518	chunk0037_216_1	21.99696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	74773488	74773700	-60312922	-	Tigger10	DNA	TcMar-Tigger	-526	1318	1101	6
chr11	74806484	74806485	chunk0037_217_1	285.2147	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	74805969	74806941	-60279681	+	L1ME3A	LINE	L1	5183	6165	-8	6
chr11	74853231	74853232	chunk0037_220_1	6.54253	AR_DHT_Control	chr11	74853016	74853300	-60233322	-	L2a	LINE	L2	0	3426	3067	6
chr11	74956668	74956669	chunk0037_225_1	7.09019	AR_DHT_Control	chr11	74955938	74957190	-60129432	+	L2a	LINE	L2	2006	3421	-5	6
chr11	74963865	74963866	chunk0037_226_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	74963784	74963873	-60122749	-	L3	LINE	CR1	-1302	2797	2710	6
chr11	74964160	74964161	chunk0037_227_1	5.44741	AR_DHT_Control	chr11	74964080	74964279	-60122343	-	L1MC	LINE	L1	-384	5789	5573	6
chr11	74982359	74982360	chunk0037_228_1	26.0051	AR_DHT_Control	chr11	74982351	74982488	-60104134	-	LTR40c	LTR	ERVL	-325	140	1	6
chr11	74984210	74984211	chunk0037_230_1	140.1802	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr11	74984155	74984558	-60102064	+	LTR40b	LTR	ERVL	2	462	0	6
chr11	75330186	75330187	chunk0037_237_1	17.6361	AR_DHT_Control	chr11	75330170	75330290	-59756332	+	MIRb	SINE	MIR	60	197	-71	6
chr11	75343110	75343111	chunk0037_239_1	56.70085	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	75343056	75343311	-59743311	-	L2b	LINE	L2	-12	3363	3103	6
chr11	75479669	75479670	chunk0037_251_1	23.13236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	75479520	75480080	-59606542	-	L1MB7	LINE	L1	-19	6165	5623	6
chr11	75495690	75495691	chunk0037_252_1	20.66758	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	75495493	75495806	-59590816	+	Zaphod	DNA	hAT-Tip100	3733	4031	0	6
chr11	75513521	75513522	chunk0037_254_1	7.15668	AR_DHT_Control	chr11	75513512	75513577	-59573045	+	MIRc	SINE	MIR	171	243	-25	6
chr11	75516706	75516707	chunk0037_255_1	6.29759	AR_DHT_Control	chr11	75516669	75516878	-59569744	-	MIR	SINE	MIR	-7	255	35	6
chr11	75592991	75592992	chunk0037_259_1	41.85966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	75592422	75593278	-59493344	+	L2b	LINE	L2	2526	3374	-1	6
chr11	75692765	75692766	chunk0037_268_1	82.94	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	75692411	75693101	-59393521	-	L1MD2	LINE	L1	-227	6132	5429	6
chr11	75715181	75715182	chunk0037_270_1	53.9951	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	75715090	75715285	-59371337	+	L1MC	LINE	L1	5201	5403	-840	6
chr11	75718886	75718887	chunk0037_271_1	122.6188	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	75718872	75719142	-59367480	-	MamRep38	DNA	hAT	0	295	9	6
chr11	75739872	75739873	chunk0037_277_1	171.9094	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	75739708	75740726	-59345896	+	L1MC3	LINE	L1	6758	7778	-7	6
chr11	75832096	75832097	chunk0037_281_1	24.355	AR_DHT_Control	chr11	75831735	75832108	-59254514	-	MER47A	DNA	TcMar-Tigger	0	366	1	6
chr11	75985845	75985846	chunk0037_287_1	48.8137	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	75985794	75986371	-59100251	-	L1ME3A	LINE	L1	-72	5084	4492	6
chr11	76056333	76056334	chunk0037_290_1	65.6954	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	76056008	76056502	-59030120	-	L1ME2z	LINE	L1	-307	6137	5505	6
chr11	76113142	76113143	chunk0037_291_1	12.8531	AR_DHT_Control	chr11	76113011	76113314	-58973308	+	HAL1	LINE	L1	1968	2288	-219	6
chr11	76140600	76140601	chunk0037_294_1	52.6309	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	76140343	76140625	-58945997	-	L3	LINE	CR1	-305	3794	3505	6
chr11	76289485	76289486	chunk0037_298_1	47.1192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	76289461	76289595	-58797027	+	L1ME3A	LINE	L1	5501	5650	-523	6
chr11	76369741	76369742	chunk0037_302_1	8.76679	AR_DHT_Control	chr11	76369452	76370004	-58716618	+	MER68B	LTR	ERVL	1	547	-17	6
chr11	76688236	76688237	chunk0037_307_1	8.0483	AR_DHT_Control	chr11	76688113	76688493	-58398129	-	L2b	LINE	L2	-182	3205	2816	6
chr11	76889151	76889152	chunk0037_320_1	5.6425	AR_DHT_Control	chr11	76888968	76889417	-58197205	-	L1MEd	LINE	L1	-6631	472	34	6
chr11	76939505	76939506	chunk0037_322_1	33.76443	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	76939393	76939619	-58147003	+	AluJb	SINE	Alu	86	306	-6	6
chr11	76963307	76963308	chunk0037_323_1	25.7533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	76962900	76963486	-58123136	+	MER61F	LTR	ERV1	1	639	-37	6
chr11	77036614	77036615	chunk0037_327_1	96.21672	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77036572	77036748	-58049874	-	MIR	SINE	MIR	-2	260	42	6
chr11	77061209	77061210	chunk0037_329_1	126.1452	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	77060926	77061432	-58025190	-	L1MC4a	LINE	L1	-1174	4972	4435	6
chr11	77075686	77075687	chunk0037_331_1	6.13982	AR_DHT_Control	chr11	77075676	77075928	-58010694	-	L1ME3A	LINE	L1	0	6173	5916	6
chr11	77253114	77253115	chunk0037_334_1	25.63268	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	77252362	77254539	-57832083	-	L1M2a	LINE	L1	-4943	2623	401	6
chr11	77316924	77316925	chunk0037_337_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77316841	77317009	-57769613	+	Tigger10	DNA	TcMar-Tigger	641	815	-1029	6
chr11	77357825	77357826	chunk0037_339_1	37.1981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	77357794	77357899	-57728723	-	L2b	LINE	L2	-17	3358	3244	6
chr11	77374885	77374886	chunk0037_341_1	56.5379	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77374616	77375134	-57711488	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	6
chr11	77389363	77389364	chunk0037_343_1	7.36432	AR_DHT_Control	chr11	77388900	77389862	-57696760	-	L1MB8	LINE	L1	0	6178	5147	6
chr11	77401467	77401468	chunk0037_345_1	17.73962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	77401386	77401554	-57685068	+	MIRb	SINE	MIR	88	262	-6	6
chr11	77424896	77424897	chunk0037_346_1	7.53305	AR_DHT_Control	chr11	77424639	77424968	-57661654	+	L2a	LINE	L2	3036	3417	-9	6
chr11	77459534	77459535	chunk0037_349_1	41.4087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	77459469	77459681	-57626941	-	L2a	LINE	L2	-2	3424	3190	6
chr11	77567075	77567076	chunk0037_350_1	70.3766	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77566993	77569808	-57516814	-	L1MA3	LINE	L1	-4405	3160	22	6
chr11	77578753	77578754	chunk0037_352_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	77578210	77579591	-57507031	+	MER4-int	LTR	ERV1	986	2537	-4061	6
chr11	77581571	77581572	chunk0037_353_1	8.95381	AR_DHT_Control	chr11	77580793	77581693	-57504929	+	MER4-int	LTR	ERV1	2806	4518	-2080	6
chr11	77695720	77695721	chunk0037_355_1	8.03415	AR_DHT_Control	chr11	77694537	77695982	-57390640	-	L1MD3	LINE	L1	-9	7986	6406	6
chr11	77827854	77827855	chunk0037_356_1	11.1716	AR_DHT_Control	chr11	77827117	77827991	-57258631	+	L1M4	LINE	L1	3493	4368	-1778	6
chr11	77890704	77890705	chunk0037_357_1	9.21264	AR_DHT_Control	chr11	77890587	77890709	-57195913	+	L2c	LINE	L2	3201	3350	-37	6
chr11	78156247	78156248	chunk0037_367_1	36.8476	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	78156015	78156336	-56930286	-	L1ME4b	LINE	L1	-334	558	243	6
chr11	78348928	78348929	chunk0037_376_1	12.257	AR_DHT_Control	chr11	78348306	78349192	-56737430	+	L1ME1	LINE	L1	5208	6170	-9	6
chr11	78476394	78476395	chunk0037_377_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	78476041	78476658	-56609964	-	L1M3b	LINE	L1	-5633	648	1	6
chr11	78498253	78498254	chunk0037_378_1	18.1215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	78498253	78498583	-56588039	+	L2	LINE	L2	2072	2419	-1000	6
chr11	78508786	78508787	chunk0037_379_1	9.21264	AR_DHT_Control	chr11	78508617	78508855	-56577767	+	L1M4c	LINE	L1	1310	1531	-4853	6
chr11	78534172	78534173	chunk0037_380_1	4.54767	AR_DHT_Control	chr11	78533711	78534357	-56552265	-	L1MC1	LINE	L1	-235	6098	5421	6
chr11	78648901	78648902	chunk0037_385_1	7.83042	AR_DHT_Control	chr11	78648545	78648971	-56437651	+	LTR16A2	LTR	ERVL	78	495	0	6
chr11	78802281	78802282	chunk0037_388_1	33.7051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	78802239	78802435	-56284187	-	MIR	SINE	MIR	-17	245	46	6
chr11	78954444	78954445	chunk0037_392_1	131.3963	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	78954389	78954860	-56131762	+	MER113	DNA	hAT-Charlie	48	521	0	6
chr11	79088815	79088816	chunk0037_393_1	9.06829	AR_DHT_Control	chr11	79088766	79088859	-55997763	-	L2b	LINE	L2	0	3375	3272	6
chr11	79135026	79135027	chunk0037_394_1	14.3571	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	79132368	79135648	-55950974	+	L1PB1	LINE	L1	4507	7785	-361	6
chr11	79216164	79216165	chunk0037_398_1	6.18774	AR_DHT_Control	chr11	79216071	79216304	-55870318	+	L2b	LINE	L2	3105	3348	-27	6
chr11	79353886	79353887	chunk0037_400_1	29.599	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	79353784	79354004	-55732618	+	MER58A	DNA	hAT-Charlie	3	224	0	6
chr11	79866729	79866730	chunk0037_414_1	37.132	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	79864413	79870856	-55215766	+	L1PA7	LINE	L1	5	6469	0	6
chr11	79920790	79920791	chunk0037_417_1	54.9205	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	79920701	79920804	-55165818	+	LTR90B	LTR	LTR	153	256	-540	6
chr11	79926932	79926933	chunk0037_418_1	15.0924	AR_DHT_Control	chr11	79926500	79926933	-55159689	-	L3b	LINE	CR1	-540	4692	4482	6
chr11	79926932	79926933	chunk0037_418_1	15.0924	AR_DHT_Control	chr11	79926914	79927205	-55159417	-	L2b	LINE	L2	0	3375	3054	6
chr11	79940251	79940252	chunk0037_420_1	15.23314	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	79940244	79940573	-55146049	+	L2b	LINE	L2	3028	3342	-33	6
chr11	80197325	80197326	chunk0037_430_1	48.9669	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80197280	80197774	-54888848	+	LTR3B_	LTR	ERVK	1	499	0	6
chr11	80223911	80223912	chunk0037_432_1	63.21422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80223897	80224019	-54862603	+	MIR3	SINE	MIR	2	140	-128	6
chr11	80259061	80259062	chunk0037_436_1	13.0632	AR_DHT_Control	chr11	80258818	80259672	-54826950	-	L1MD1	LINE	L1	-105	6528	5660	6
chr11	80343922	80343923	chunk0037_438_1	6.35715	AR_DHT_Control	chr11	80343897	80343969	-54742653	-	MIRb	SINE	MIR	-120	148	79	6
chr11	80361846	80361847	chunk0037_440_1	26.4175	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80359631	80362078	-54724544	-	Tigger2	DNA	TcMar-Tigger	-188	2530	115	6
chr11	80380035	80380036	chunk0037_441_1	7.03714	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80379948	80380156	-54706466	-	MIRb	SINE	MIR	-17	251	22	6
chr11	80382397	80382398	chunk0037_442_1	5.70484	AR_DHT_Control	chr11	80382208	80382494	-54704128	+	L4_A_Mam	LINE	RTE-X	3110	3399	-1591	6
chr11	80432255	80432256	chunk0037_445_1	14.23557	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80431833	80432633	-54653989	+	L2a	LINE	L2	798	1899	-1520	6
chr11	80550508	80550509	chunk0037_447_1	8.58634	AR_DHT_Control	chr11	80548563	80550566	-54536056	+	L1PA16	LINE	L1	4334	6314	-189	6
chr11	80588091	80588092	chunk0037_448_1	52.2138	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	80587993	80588349	-54498273	-	L4_C_Mam	LINE	RTE-X	-256	4882	4533	6
chr11	80725289	80725290	chunk0038_2_1	42.6791	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80724787	80725329	-54361293	-	L1ME1	LINE	L1	0	6179	5628	6
chr11	80899592	80899593	chunk0038_13_1	41.2391	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	80898985	80900084	-54186538	-	L1MB8	LINE	L1	-6	6172	5066	6
chr11	80921429	80921430	chunk0038_15_1	127.2306	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80921306	80921917	-54164705	+	LTR10C	LTR	ERV1	1	591	0	6
chr11	80928880	80928881	chunk0038_17_1	19.5995	AR_DHT_Control	chr11	80928703	80929000	-54157622	-	L1PA15	LINE	L1	-7	6158	5855	6
chr11	80958532	80958533	chunk0038_21_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	80958381	80958545	-54128077	-	MIR3	SINE	MIR	-22	186	10	6
chr11	81119488	81119489	chunk0038_24_1	12.95178	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	81119397	81119575	-53967047	+	AmnSINE1	SINE	5S-Deu-L2	321	505	-70	6
chr11	81169736	81169737	chunk0038_31_1	16.11053	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	81168791	81169981	-53916641	-	L1PA14	LINE	L1	-4	6157	4958	6
chr11	81968537	81968538	chunk0038_38_1	14.6324	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	81968112	81968677	-53117945	-	L1ME2	LINE	L1	-2058	4883	4267	6
chr11	82235215	82235216	chunk0038_42_1	65.2142	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	82235172	82235299	-52851323	-	MIRb	SINE	MIR	-24	244	107	6
chr11	82574504	82574505	chunk0038_51_1	47.2737	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	82574493	82574552	-52512070	+	L1MA4A	LINE	L1	5922	5980	-323	6
chr11	82682518	82682519	chunk0038_52_1	15.3991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	82682499	82682531	-52404091	+	(GA)n	Simple_repeat	Simple_repeat	1	32	0	6
chr11	82902799	82902800	chunk0038_58_1	49.9733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	82902798	82902921	-52183701	-	L2c	LINE	L2	0	3426	3295	6
chr11	83007114	83007115	chunk0038_62_1	6.94032	AR_DHT_Control	chr11	83006990	83007191	-52079431	-	MIRc	SINE	MIR	-33	235	19	6
chr11	83009609	83009610	chunk0038_63_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	83009604	83009637	-52076985	+	(AAAAT)n	Simple_repeat	Simple_repeat	1	34	0	6
chr11	83020019	83020020	chunk0038_64_1	11.277	AR_DHT_Control	chr11	83019934	83021782	-52064840	+	MER52A	LTR	ERV1	1	1755	0	6
chr11	83045491	83045492	chunk0038_67_1	40.2208	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	83045434	83045538	-52041084	-	L2c	LINE	L2	-15	3372	3273	6
chr11	83052363	83052364	chunk0038_69_1	6.6351	AR_DHT_Control	chr11	83052160	83052402	-52034220	-	MIRc	SINE	MIR	-2	266	9	6
chr11	83087273	83087274	chunk0038_72_1	14.90593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	83087187	83087325	-51999297	-	L2a	LINE	L2	-5	3421	3282	6
chr11	83139544	83139545	chunk0038_78_1	187.6802	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	83139381	83139562	-51947060	+	MIRc	SINE	MIR	27	234	-34	7
chr11	83195570	83195571	chunk0038_80_1	8.67138	AR_DHT_Control	chr11	83195474	83195840	-51890782	+	L2c	LINE	L2	2358	2758	-661	7
chr11	83282518	83282519	chunk0038_83_1	10.49318	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	83282471	83282866	-51803756	+	L2b	LINE	L2	2849	3250	-125	7
chr11	83371557	83371558	chunk0038_88_1	10.1791	AR_DHT_Control	chr11	83371084	83371640	-51714982	-	L1MC3	LINE	L1	-88	7697	7116	7
chr11	83389097	83389098	chunk0038_90_1	119.4537	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	83388765	83389136	-51697486	+	L1MA6	LINE	L1	5931	6300	0	7
chr11	83778500	83778501	chunk0038_111_1	6.10159	AR_DHT_Control	chr11	83778306	83778511	-51308111	+	LTR89	LTR	ERVL?	325	534	-345	7
chr11	83855948	83855949	chunk0038_114_1	12.811	AR_DHT_Control	chr11	83855848	83857485	-51229137	-	L1PA13	LINE	L1	-26	6137	4484	7
chr11	83923306	83923307	chunk0038_116_1	4.59852	AR_DHT_Control	chr11	83923288	83923472	-51163150	-	MIRc	SINE	MIR	-64	204	20	7
chr11	83951496	83951497	chunk0038_119_1	59.2003	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	83951247	83952063	-51134559	-	L2a	LINE	L2	-4	3422	2504	7
chr11	83957314	83957315	chunk0038_121_1	39.3761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	83957287	83957413	-51129209	-	L4_A_Mam	LINE	RTE-X	-1677	3313	3154	7
chr11	83988018	83988019	chunk0038_127_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	83987794	83988646	-51097976	-	L1PA11	LINE	L1	-685	5489	4415	7
chr11	84127117	84127118	chunk0038_136_1	6.02254	AR_DHT_Control	chr11	84126942	84127137	-50959485	+	L1M5	LINE	L1	5510	5721	-403	7
chr11	84304618	84304619	chunk0038_140_1	16.5991	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	84304506	84304829	-50781793	-	MER58B	DNA	hAT-Charlie	0	341	1	7
chr11	84608930	84608931	chunk0038_152_1	9.68843	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	84608820	84609044	-50477578	-	MIR	SINE	MIR	-30	232	8	7
chr11	84777895	84777896	chunk0038_155_1	8.79298	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	84777325	84778661	-50307961	-	L1PB4	LINE	L1	-378	5778	4431	7
chr11	84867010	84867011	chunk0038_162_1	6.98682	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	84866918	84867026	-50219596	+	L2c	LINE	L2	3278	3387	0	7
chr11	84987949	84987950	chunk0038_166_1	23.0802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	84986018	84988878	-50097744	+	L1PB1	LINE	L1	3940	6865	-2	7
chr11	85581824	85581825	chunk0038_173_1	22.57645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	85581701	85582455	-49504167	-	L2a	LINE	L2	-1759	1660	833	7
chr11	85638602	85638603	chunk0038_176_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	85638540	85638676	-49447946	+	MIR	SINE	MIR	91	251	-11	7
chr11	85832349	85832350	chunk0038_183_1	8.16452	AR_DHT_Control	chr11	85832160	85832356	-49254266	-	MIRb	SINE	MIR	0	268	66	7
chr11	85867867	85867868	chunk0038_184_1	74.3638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	85867616	85868032	-49218590	-	LTR83	LTR	ERVL	-305	475	4	7
chr11	85878549	85878550	chunk0038_185_1	41.5937	AR_DHT_Control	chr11	85878098	85879445	-49207177	-	L1MD1	LINE	L1	0	6633	5235	7
chr11	86017666	86017667	chunk0038_186_1	56.4445	AR_DHT_Control	chr11	86017498	86017674	-49068948	-	MIRb	SINE	MIR	-14	254	64	7
chr11	86061751	86061752	chunk0038_187_1	93.607	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	86061360	86062234	-49024388	+	L1MC1	LINE	L1	5238	6126	-207	7
chr11	86080605	86080606	chunk0038_192_1	90.8246	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	86080487	86081001	-49005621	-	L1MC1	LINE	L1	-673	5835	5333	7
chr11	86135080	86135081	chunk0038_194_1	12.4453	AR_DHT_Control	chr11	86134756	86135187	-48951435	-	L2c	LINE	L2	-2	3385	2942	7
chr11	86160755	86160756	chunk0038_195_1	4.86605	AR_DHT_Control	chr11	86160633	86160836	-48925786	+	L2c	LINE	L2	3180	3385	-2	7
chr11	86198519	86198520	chunk0038_197_1	106.1866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	86198166	86199206	-48887416	+	L1MC1	LINE	L1	5323	6333	0	7
chr11	86248984	86248985	chunk0038_204_1	6.29634	AR_DHT_Control	chr11	86248736	86249004	-48837618	+	AluJb	SINE	Alu	1	288	-24	7
chr11	86275187	86275188	chunk0038_205_1	9.07871	AR_DHT_Control	chr11	86273310	86275285	-48811337	-	L1MD1	LINE	L1	-4349	2284	19	7
chr11	86314918	86314919	chunk0038_206_1	16.4778	AR_DHT_Control	chr11	86314792	86314979	-48771643	+	MER5A	DNA	hAT-Charlie	4	189	0	7
chr11	86378213	86378214	chunk0038_208_1	5.21805	AR_DHT_Control	chr11	86376691	86378222	-48708400	-	L1MC1	LINE	L1	-61	6447	4881	7
chr11	86499826	86499827	chunk0038_212_1	5.69226	AR_DHT_Control	chr11	86499703	86499850	-48586772	-	MIRc	SINE	MIR	0	268	118	7
chr11	86777183	86777184	chunk0038_220_1	7.36432	AR_DHT_Control	chr11	86777127	86777409	-48309213	-	L1MB3	LINE	L1	-1	5593	5289	7
chr11	86962342	86962343	chunk0038_225_1	10.1791	AR_DHT_Control	chr11	86962070	86962519	-48124103	+	MLT2F	LTR	ERVL	6	491	-172	7
chr11	86976883	86976884	chunk0038_226_1	6.89429	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	86976788	86976966	-48109656	-	MER91A	DNA	hAT-Tip100	-1	195	2	7
chr11	87036963	87036964	chunk0038_234_1	9.63948	AR_DHT_Control	chr11	87036792	87036990	-48049632	+	L2a	LINE	L2	3216	3425	-1	7
chr11	87121256	87121257	chunk0038_236_1	30.01065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	87121255	87121499	-47965123	-	L2a	LINE	L2	0	3426	3110	7
chr11	87123037	87123038	chunk0038_237_1	14.84928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	87122900	87123144	-47963478	-	MER58B	DNA	hAT-Charlie	0	341	98	7
chr11	87128553	87128554	chunk0038_239_1	91.1432	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	87128520	87128555	-47958067	+	L2b	LINE	L2	3339	3373	-2	7
chr11	87150790	87150791	chunk0038_242_1	7.97574	AR_DHT_Control	chr11	87150261	87150809	-47935813	-	HAL1	LINE	L1	-57	2408	1856	7
chr11	87173476	87173477	chunk0038_243_1	4.59338	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	87173448	87173601	-47913021	+	MIRb	SINE	MIR	86	234	-34	7
chr11	87203631	87203632	chunk0038_247_1	64.1545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	87203058	87203936	-47882686	-	L1MC1	LINE	L1	-26	6307	5428	7
chr11	87396196	87396197	chunk0038_249_1	60.0076	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	87396182	87396406	-47690216	-	L1MC5	LINE	L1	-1990	7314	7086	7
chr11	89456977	89456978	chunk0038_263_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	89456405	89457763	-45628859	+	L1PA15	LINE	L1	13	1655	-5131	7
chr11	89633515	89633516	chunk0038_272_1	22.62802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	89633486	89633802	-45452820	+	L1ME3A	LINE	L1	5850	6165	-8	7
chr11	89649146	89649147	chunk0038_273_1	9.00107	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	89648500	89649235	-45437387	-	L1M5	LINE	L1	-1994	4152	3455	7
chr11	89672793	89672794	chunk0038_277_1	11.66156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	89672739	89672959	-45413663	-	MIRc	SINE	MIR	-20	248	32	7
chr11	89685178	89685179	chunk0038_280_1	16.4778	AR_DHT_Control	chr11	89684957	89685313	-45401309	+	L1PA13	LINE	L1	4468	4832	-2749	7
chr11	89728462	89728463	chunk0038_281_1	16.4778	AR_DHT_Control	chr11	89728370	89728644	-45357978	-	L1PA15-16	LINE	L1	-5334	1519	1235	7
chr11	90074268	90074269	chunk0038_283_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	90074189	90074337	-45012285	+	AluSc	SINE	Alu	155	302	-7	7
chr11	90103785	90103786	chunk0038_285_1	12.35885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	90103565	90104186	-44982436	+	L1MC	LINE	L1	5157	5799	-380	7
chr11	90115867	90115868	chunk0038_287_1	7.63982	AR_DHT_Control	chr11	90114692	90116198	-44970424	+	L1MA5A	LINE	L1	4126	5523	-774	7
chr11	90120009	90120010	chunk0038_288_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	90119785	90120096	-44966526	-	L1ME1	LINE	L1	-153	6199	5892	7
chr11	90251715	90251716	chunk0038_292_1	36.70343	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	90251700	90251731	-44834891	+	MER51E	LTR	ERV1	45	75	-407	7
chr11	90363894	90363895	chunk0038_295_1	52.0008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	90363824	90364010	-44722612	+	MLT1J2	LTR	ERVL-MaLR	2	210	-238	7
chr11	90758329	90758330	chunk0038_300_1	14.22884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	90758131	90758559	-44328063	+	L1ME1	LINE	L1	5521	6000	-179	7
chr11	91383147	91383148	chunk0038_313_1	28.9291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	91383140	91383294	-43703328	-	MER20B	DNA	hAT-Charlie	-610	173	6	7
chr11	91397130	91397131	chunk0038_315_1	53.0556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	91396947	91397941	-43688681	-	L2a	LINE	L2	0	3426	2435	7
chr11	92026237	92026238	chunk0038_325_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	92026011	92026890	-43059732	+	L1MC3	LINE	L1	6688	7585	-200	7
chr11	92070567	92070568	chunk0038_326_1	9.21264	AR_DHT_Control	chr11	92070273	92070807	-43015815	+	L1MA4	LINE	L1	1500	2013	-4552	7
chr11	92503493	92503494	chunk0038_327_1	10.493	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	92503396	92503596	-42583026	-	MIRb	SINE	MIR	-23	245	26	7
chr11	92640343	92640344	chunk0038_328_1	15.20668	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	92640234	92640465	-42446157	+	MIRb	SINE	MIR	28	251	-17	7
chr11	92666852	92666853	chunk0038_330_1	7.26348	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	92666806	92666936	-42419686	-	MLT1J1	LTR	ERVL-MaLR	-222	222	83	7
chr11	92942807	92942808	chunk0038_347_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	92942782	92942842	-42143780	+	GA-rich	Low_complexity	Low_complexity	1	61	0	7
chr11	93257738	93257739	chunk0038_360_1	70.0373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	93257512	93257779	-41828843	-	ORSL	DNA	hAT-Tip100	0	275	1	7
chr11	93359575	93359576	chunk0038_368_1	17.297	AR_DHT_Control	chr11	93359402	93361943	-41724679	+	L1MDa	LINE	L1	16	2723	-3814	7
chr11	93374650	93374651	chunk0038_370_1	30.551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	93373662	93375947	-41710675	-	L1PB1	LINE	L1	-368	6499	4211	7
chr11	93378915	93378916	chunk0038_371_1	5.85263	AR_DHT_Control	chr11	93378787	93378941	-41707681	-	L1PBa	LINE	L1	-6727	136	1	7
chr11	93465327	93465328	chunk0038_377_1	22.64664	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	93465272	93465360	-41621262	-	MER58B	DNA	hAT-Charlie	-289	97	14	7
chr11	93648185	93648186	chunk0038_397_1	16.6995	AR_DHT_Control	chr11	93648131	93648234	-41438388	-	Charlie17a	DNA	hAT-Charlie	-110	107	2	7
chr11	93651252	93651253	chunk0038_399_1	33.8532	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	93651180	93651352	-41435270	-	L2a	LINE	L2	-1600	1819	1630	7
chr11	93745234	93745235	chunk0038_402_1	34.90059	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	93744696	93745652	-41340970	-	LTR5B	LTR	ERVK	0	1002	1	7
chr11	93768410	93768411	chunk0038_404_1	29.4712	AR_DHT_Control	chr11	93768406	93768510	-41318112	-	L2c	LINE	L2	-17	3370	3268	7
chr11	93876593	93876594	chunk0038_407_1	6.13992	AR_DHT_Control	chr11	93876094	93877036	-41209586	-	MER4-int	LTR	ERV1	-2527	2576	725	7
chr11	94146102	94146103	chunk0038_413_1	18.0664	AR_DHT_Control	chr11	94145741	94147172	-40939450	+	L1MC4	LINE	L1	6414	8041	-1	7
chr11	94236611	94236612	chunk0038_416_1	10.6722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	94232524	94238528	-40848094	-	L1PA2	LINE	L1	-3	6152	124	7
chr11	94238277	94238278	chunk0038_418_1	38.1115	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	94232524	94238528	-40848094	-	L1PA2	LINE	L1	-3	6152	124	7
chr11	94449618	94449619	chunk0038_423_1	48.9749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	94449602	94449944	-40636678	-	Tigger3a	DNA	TcMar-Tigger	-1	347	2	7
chr11	94592403	94592404	chunk0038_429_1	12.7163	AR_DHT_Control	chr11	94592387	94592473	-40494149	+	L2c	LINE	L2	3300	3386	-1	7
chr11	94632605	94632606	chunk0038_430_1	44.2864	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	94632420	94633019	-40453603	+	L1ME4b	LINE	L1	3476	4064	-2082	7
chr11	94660067	94660068	chunk0038_437_1	93.666	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	94659968	94660150	-40426472	+	L2c	LINE	L2	2910	3076	-311	7
chr11	94746841	94746842	chunk0038_444_1	16.27	AR_DHT_Control	chr11	94746841	94746929	-40339693	+	L2b	LINE	L2	3281	3369	-6	7
chr11	94838239	94838240	chunk0038_459_1	49.7594	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	94838085	94838319	-40248303	+	L2a	LINE	L2	3203	3425	-1	7
chr11	94880253	94880254	chunk0039_1_1	7.14145	AR_DHT_Control	chr11	94879931	94880376	-40206246	+	L2b	LINE	L2	2910	3374	-1	7
chr11	94885933	94885934	chunk0039_2_1	9.72299	AR_DHT_Control	chr11	94885871	94886154	-40200468	+	AluJr4	SINE	Alu	10	293	-19	7
chr11	95119593	95119594	chunk0039_10_1	9.63462	AR_DHT_Control	chr11	95117419	95121260	-39965362	-	L1MA2	LINE	L1	-3659	3906	12	7
chr11	95120850	95120851	chunk0039_11_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	95117419	95121260	-39965362	-	L1MA2	LINE	L1	-3659	3906	12	7
chr11	95349121	95349122	chunk0039_13_1	183.2671	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	95346175	95352658	-39733964	+	L1M1	LINE	L1	15	6703	-862	7
chr11	95399433	95399434	chunk0039_15_1	8.27376	AR_DHT_Control	chr11	95399179	95399781	-39686841	-	L1MB7	LINE	L1	-9	6175	5556	7
chr11	95585255	95585256	chunk0039_18_1	12.1955	AR_DHT_Control	chr11	95585114	95585496	-39501126	+	L1PREC2	LINE	L1	5775	6156	-4	7
chr11	95641708	95641709	chunk0039_20_1	5.56779	AR_DHT_Control	chr11	95641631	95641709	-39444913	-	AmnSINE1	SINE	5S-Deu-L2	-479	96	4	7
chr11	95647531	95647532	chunk0039_21_1	104.139	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	95647384	95647770	-39438852	-	Charlie29a	DNA	hAT-Charlie	-203	516	106	7
chr11	95664612	95664613	chunk0039_26_1	120.2932	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	95661603	95665287	-39421335	-	L1MB1	LINE	L1	-386	6018	2207	7
chr11	95717631	95717632	chunk0039_28_1	14.6774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	95717557	95717716	-39368906	-	MIRb	SINE	MIR	-11	257	101	7
chr11	95732557	95732558	chunk0039_29_1	15.4506	AR_DHT_Control	chr11	95732092	95732612	-39354010	-	L1ME3	LINE	L1	-1	6161	5594	7
chr11	95742132	95742133	chunk0039_30_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	95741733	95742437	-39344185	-	L1ME1	LINE	L1	-3	6349	5606	7
chr11	96057703	96057704	chunk0039_44_1	93.497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	96057662	96057879	-39028743	-	Tigger15a	DNA	TcMar-Tigger	0	715	473	7
chr11	96235238	96235239	chunk0039_57_1	21.78272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	96235220	96235444	-38851178	+	MER58A	DNA	hAT-Charlie	7	224	0	7
chr11	96256681	96256682	chunk0039_61_1	13.4818	AR_DHT_Control	chr11	96256332	96256713	-38829909	+	L2c	LINE	L2	2948	3387	0	7
chr11	96311022	96311023	chunk0039_64_1	11.142	AR_DHT_Control	chr11	96310960	96311187	-38775435	-	MIRb	SINE	MIR	-3	259	6	7
chr11	96329576	96329577	chunk0039_67_1	33.5977	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	96329526	96329704	-38756918	-	MIR1_Amn	SINE	MIR	-19	189	22	7
chr11	96403604	96403605	chunk0039_70_1	35.13014	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	96403323	96404167	-38682455	+	L1MB7	LINE	L1	5318	6173	-11	7
chr11	96420523	96420524	chunk0039_73_1	24.1561	AR_DHT_Control	chr11	96419263	96420941	-38665681	+	L1MA3	LINE	L1	5867	7724	0	7
chr11	96878126	96878127	chunk0039_75_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	96877292	96878981	-38207641	-	MER52A	LTR	ERV1	0	1755	1	7
chr11	96900391	96900392	chunk0039_76_1	15.706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	96898075	96900775	-38185847	-	L1MC3	LINE	L1	-62	7723	4909	7
chr11	97060020	97060021	chunk0039_77_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97059668	97061761	-38024861	+	L1MA4A	LINE	L1	893	2979	-4587	7
chr11	97060569	97060570	chunk0039_78_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97059668	97061761	-38024861	+	L1MA4A	LINE	L1	893	2979	-4587	7
chr11	97068781	97068782	chunk0039_79_1	5.21805	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	97068674	97073894	-38012728	-	L1PA11	LINE	L1	0	7609	2346	7
chr11	97069511	97069512	chunk0039_81_1	23.02057	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	97068674	97073894	-38012728	-	L1PA11	LINE	L1	0	7609	2346	7
chr11	97141078	97141079	chunk0039_84_1	15.28556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	97139518	97141186	-37945436	-	L1M3b	LINE	L1	-3676	3169	1554	7
chr11	97202569	97202570	chunk0039_86_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97198864	97203282	-37883340	-	L1PBb	LINE	L1	-3169	3746	65	7
chr11	97214500	97214501	chunk0039_88_1	18.7266	AR_DHT_Control	chr11	97214376	97214827	-37871795	+	L1MC1	LINE	L1	5595	6023	-310	7
chr11	97238844	97238845	chunk0039_90_1	105.30253	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	97238732	97239036	-37847586	+	ERVL-E-int	LTR	ERVL	2015	2332	-3335	7
chr11	97310426	97310427	chunk0039_99_1	7.48058	AR_DHT_Control	chr11	97310254	97310440	-37776182	+	L1ME2	LINE	L1	5978	6162	-2	7
chr11	97389415	97389416	chunk0039_101_1	64.9612	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	97389297	97389634	-37696988	-	ERVL-E-int	LTR	ERVL	-2446	3221	2874	7
chr11	97498242	97498243	chunk0039_103_1	3.85446	AR_DHT_Control	chr11	97497945	97499148	-37587474	+	L1M4b	LINE	L1	931	2176	-4691	7
chr11	97609961	97609962	chunk0039_106_1	76.60926	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	97609848	97610812	-37475810	-	HUERS-P2-int	LTR	ERV1	-1901	1187	212	7
chr11	97720122	97720123	chunk0039_112_1	22.46942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	97719735	97720710	-37365912	+	L1MB7	LINE	L1	5180	6172	-12	7
chr11	97740028	97740029	chunk0039_113_1	48.0675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	97739790	97741332	-37345290	-	L1M4b	LINE	L1	-5246	1621	6	7
chr11	97752613	97752614	chunk0039_115_1	4.70357	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97751428	97753048	-37333574	-	MER52A	LTR	ERV1	-1	1754	1	7
chr11	97854256	97854257	chunk0039_117_1	10.4825	AR_DHT_Control	chr11	97853946	97854652	-37231970	+	MER67C	LTR	ERV1	9	710	-1	7
chr11	97872117	97872118	chunk0039_118_1	53.116	AR_DHT_Control	chr11	97870533	97872635	-37213987	-	L1MA2	LINE	L1	-4812	2753	16	7
chr11	97982519	97982520	chunk0039_119_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	97981975	97982839	-37103783	+	LTR27D	LTR	ERV1	3	1077	0	7
chr11	98057140	98057141	chunk0039_123_1	29.5769	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	98056752	98057275	-37029347	-	LTR40a	LTR	ERVL	0	519	7	7
chr11	98246670	98246671	chunk0039_128_1	31.4896	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	98245225	98249424	-36837198	-	L1MA4	LINE	L1	0	7719	3471	7
chr11	98445046	98445047	chunk0039_134_1	8.27376	AR_DHT_Control	chr11	98444429	98445100	-36641522	-	L2	LINE	L2	-664	2755	2086	7
chr11	98451693	98451694	chunk0039_135_1	59.94258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	98451347	98451818	-36634804	-	L1MC1	LINE	L1	-388	5945	5458	7
chr11	98598891	98598892	chunk0039_140_1	29.24822	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	98598301	98601927	-36484695	-	L1M1	LINE	L1	-2894	4671	16	7
chr11	98631114	98631115	chunk0039_144_1	12.69436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	98630896	98631395	-36455227	-	LTR22B	LTR	ERVK	0	492	1	7
chr11	98807955	98807956	chunk0039_153_1	45.96709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	98806588	98808603	-36278019	-	L1PB4	LINE	L1	-1	6155	4155	7
chr11	98855729	98855730	chunk0039_155_1	51.42506	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	98854805	98855950	-36230672	+	L1MC1	LINE	L1	1163	2338	-4170	7
chr11	98868233	98868234	chunk0039_157_1	59.41461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	98867893	98868285	-36218337	-	MLT1E1A	LTR	ERVL-MaLR	-3	677	298	7
chr11	98876609	98876610	chunk0039_158_1	12.2633	AR_DHT_Control	chr11	98876228	98876710	-36209912	-	MLT2B4	LTR	ERVL	-71	485	1	7
chr11	98888280	98888281	chunk0039_159_1	5.6425	AR_DHT_Control	chr11	98887732	98889644	-36196978	-	L1MC1	LINE	L1	-18	6315	4414	7
chr11	99079611	99079612	chunk0039_163_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	99079610	99080056	-36006566	+	L2c	LINE	L2	2911	3369	-18	7
chr11	99350286	99350287	chunk0039_166_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	99350238	99350853	-35735769	+	L1ME2z	LINE	L1	5421	6042	-402	7
chr11	100273443	100273444	chunk0039_177_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	100272552	100273756	-34812866	+	L1PA13	LINE	L1	13	1229	-5556	7
chr11	100435023	100435024	chunk0039_179_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	100434947	100435373	-34651249	+	LTR18B	LTR	ERVL	81	614	0	7
chr11	100753195	100753196	chunk0039_186_1	4.02808	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	100752079	100754040	-34332582	-	L1PBa	LINE	L1	-5219	1644	3	7
chr11	100789613	100789614	chunk0039_189_1	24.862	AR_DHT_Control	chr11	100789364	100789752	-34296870	-	LTR18A	LTR	ERVL	0	357	1	7
chr11	100837498	100837499	chunk0039_190_1	8.65676	AR_DHT_Control	chr11	100837395	100837666	-34248956	-	LTR43B	LTR	ERV1	-65	820	430	7
chr11	100841940	100841941	chunk0039_191_1	7.91724	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	100841562	100841984	-34244638	+	L2a	LINE	L2	2871	3325	-101	7
chr11	100875820	100875821	chunk0039_193_1	32.7933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	100875817	100876045	-34210577	+	MER58B	DNA	hAT-Charlie	112	340	-1	7
chr11	100881175	100881176	chunk0039_194_1	12.4231	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	100880105	100881829	-34204793	-	L1PB1	LINE	L1	0	6151	4404	7
chr11	100902848	100902849	chunk0039_199_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	100902750	100903117	-34183505	+	LTR16D	LTR	ERVL	166	580	-71	7
chr11	100902988	100902989	chunk0039_200_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	100902750	100903117	-34183505	+	LTR16D	LTR	ERVL	166	580	-71	7
chr11	100919362	100919363	chunk0039_203_1	22.1378	AR_DHT_Control	chr11	100918930	100919464	-34167158	-	MER68	LTR	ERVL	0	563	1	7
chr11	101113596	101113597	chunk0039_213_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101113569	101113663	-33972959	-	Charlie7	DNA	hAT-Charlie	-905	1707	1613	7
chr11	101227539	101227540	chunk0039_217_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101226817	101227595	-33859027	+	L1MEd	LINE	L1	562	1398	-5688	7
chr11	101470679	101470680	chunk0039_220_1	11.5684	AR_DHT_Control	chr11	101470632	101470778	-33615844	-	L3	LINE	CR1	-601	3498	3348	7
chr11	101511372	101511373	chunk0039_224_1	8.84892	AR_DHT_Control	chr11	101511325	101511430	-33575192	+	L2b	LINE	L2	3263	3375	0	7
chr11	101521892	101521893	chunk0039_225_1	9.21264	AR_DHT_Control	chr11	101520431	101522131	-33564491	+	MSTA-int	LTR	ERVL-MaLR	1	1631	0	7
chr11	101599031	101599032	chunk0039_226_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101598935	101599442	-33487180	+	L1M5	LINE	L1	3217	3740	-2406	7
chr11	101663365	101663366	chunk0039_227_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101663241	101666127	-33420495	-	L1MA2	LINE	L1	-4219	3346	17	7
chr11	101730458	101730459	chunk0039_228_1	18.7412	AR_DHT_Control	chr11	101729184	101730995	-33355627	-	L1MB8	LINE	L1	-2	6176	4296	7
chr11	101771707	101771708	chunk0039_231_1	6.62784	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	101771664	101772137	-33314485	+	L2b	LINE	L2	2657	3124	-251	7
chr11	101932897	101932898	chunk0039_232_1	34.74311	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	101932579	101932907	-33153715	+	L2a	LINE	L2	3004	3366	-60	7
chr11	101945199	101945200	chunk0039_235_1	44.0021	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	101944973	101945444	-33141178	-	L2c	LINE	L2	-1	3374	2875	7
chr11	102007662	102007663	chunk0039_237_1	5.32898	AR_DHT_Control	chr11	102007381	102007811	-33078811	-	L2c	LINE	L2	0	3387	2901	7
chr11	102086028	102086029	chunk0039_242_1	67.222	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	102085972	102086031	-33000591	+	L2a	LINE	L2	3316	3375	-51	7
chr11	102147254	102147255	chunk0039_246_1	5.69781	AR_DHT_Control	chr11	102147188	102147277	-32939345	-	MIRb	SINE	MIR	-10	252	162	7
chr11	102201988	102201989	chunk0039_252_1	10.3174	AR_DHT_Control	chr11	102201433	102202165	-32884457	+	L1MC5a	LINE	L1	908	1700	-1077	7
chr11	102214697	102214698	chunk0039_254_1	21.6471	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	102214658	102214703	-32871919	+	(ATATTTT)n	Simple_repeat	Simple_repeat	1	47	0	7
chr11	102320865	102320866	chunk0039_263_1	5.18121	AR_DHT_Control	chr11	102320560	102321072	-32765550	-	Charlie8	DNA	hAT-Charlie	-1899	529	40	7
chr11	102344983	102344984	chunk0039_264_1	6.41766	AR_DHT_Control	chr11	102344565	102345089	-32741533	+	L1MC5a	LINE	L1	1198	1694	-1083	7
chr11	102365077	102365078	chunk0039_267_1	156.5162	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	102364839	102365578	-32721044	+	L2a	LINE	L2	1264	2091	-1328	7
chr11	102411341	102411342	chunk0039_271_1	11.6192	AR_DHT_Control	chr11	102410973	102411741	-32674881	+	MER21C	LTR	ERVL	123	921	-17	7
chr11	102485468	102485469	chunk0039_274_1	6.40219	AR_DHT_Control	chr11	102485311	102485706	-32600916	+	MER34-int	LTR	ERV1	7780	8207	0	7
chr11	102514037	102514038	chunk0039_277_1	137.0978	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	102513871	102514311	-32572311	-	MLT1C	LTR	ERVL-MaLR	0	467	2	7
chr11	102636141	102636142	chunk0039_285_1	14.82118	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	102635752	102636252	-32450370	-	L1MC4a	LINE	L1	-346	7536	6997	7
chr11	102667288	102667289	chunk0039_287_1	25.6171	AR_DHT_Control	chr11	102667267	102667372	-32419250	+	MER102c	DNA	hAT-Charlie	222	331	0	7
chr11	102739811	102739812	chunk0039_292_1	86.1698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	102738877	102741441	-32345181	-	L1M1	LINE	L1	-1253	6309	3795	7
chr11	102988297	102988298	chunk0039_299_1	9.56062	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	102988194	102988651	-32097971	-	L1MB5	LINE	L1	0	6174	5701	7
chr11	103103590	103103591	chunk0039_306_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	103103484	103103819	-31982803	-	MLT1A0	LTR	ERVL-MaLR	-1	364	21	7
chr11	103336297	103336298	chunk0039_312_1	19.04782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	103336153	103336918	-31749704	-	L1MA4	LINE	L1	-5	6295	5621	7
chr11	103450449	103450450	chunk0039_317_1	98.2045	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	103449877	103450668	-31635954	+	L1MEh	LINE	L1	2137	2973	-3173	7
chr11	103484613	103484614	chunk0039_319_1	136.1937	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	103484560	103484725	-31601897	+	MER68-int	LTR	ERVL	2544	2712	-278	7
chr11	103547667	103547668	chunk0039_320_1	9.63462	AR_DHT_Control	chr11	103547459	103547670	-31538952	-	MIRb	SINE	MIR	-2	266	30	7
chr11	103609735	103609736	chunk0039_321_1	7.36432	AR_DHT_Control	chr11	103609252	103609780	-31476842	-	LTR50	LTR	ERVL	-119	676	3	7
chr11	104352211	104352212	chunk0039_331_1	124.63073	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	104351977	104352306	-30734316	+	Tigger3a	DNA	TcMar-Tigger	4	348	0	7
chr11	104369998	104369999	chunk0039_335_1	9.83323	AR_DHT_Control	chr11	104369605	104370204	-30716418	-	Tigger17a	DNA	TcMar-Tigger	-35	619	1	7
chr11	104793300	104793301	chunk0039_338_1	51.9885	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	104792862	104793722	-30292900	+	MER21C	LTR	ERVL	3	913	-25	7
chr11	105450255	105450256	chunk0039_345_1	27.5648	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	105450039	105452223	-29634399	-	L1M4a2	LINE	L1	-3273	2873	1043	7
chr11	105452091	105452092	chunk0039_346_1	36.1277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	105450039	105452223	-29634399	-	L1M4a2	LINE	L1	-3273	2873	1043	7
chr11	105499767	105499768	chunk0039_349_1	45.071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	105499750	105500000	-29586622	-	L1MC3	LINE	L1	-1990	5795	5547	7
chr11	105500863	105500864	chunk0039_351_1	47.0814	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	105500000	105501697	-29584925	-	L1MC	LINE	L1	-2239	5546	3914	7
chr11	105701323	105701324	chunk0039_353_1	91.3512	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	105701108	105701325	-29385297	+	L2b	LINE	L2	3145	3387	0	7
chr11	105899650	105899651	chunk0039_358_1	37.3277	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	105899593	105900240	-29186382	-	Tigger17a	DNA	TcMar-Tigger	0	654	2	7
chr11	106121732	106121733	chunk0039_365_1	74.8176	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	106121389	106121931	-28964691	-	LTR36	LTR	ERV1	0	611	2	7
chr11	106138055	106138056	chunk0039_368_1	93.8546	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr11	106137489	106138814	-28947808	+	L1PREC2	LINE	L1	4817	6160	0	7
chr11	106172539	106172540	chunk0039_370_1	7.91029	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	106172244	106172674	-28913948	+	LTR56	LTR	ERV1	7	437	0	7
chr11	106819674	106819675	chunk0039_379_1	4.51651	AR_DHT_Control	chr11	106818985	106819776	-28266846	+	Tigger1	DNA	TcMar-Tigger	1613	2418	0	7
chr11	107006089	107006090	chunk0039_381_1	26.9685	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	107005980	107006161	-28080461	-	MIRb	SINE	MIR	-5	263	63	7
chr11	107103119	107103120	chunk0039_385_1	7.42871	AR_DHT_Control	chr11	107102149	107104353	-27982269	+	L1PB3	LINE	L1	60	1692	-5224	7
chr11	107128712	107128713	chunk0039_386_1	28.9709	AR_DHT_Control	chr11	107128327	107129124	-27957498	+	L2c	LINE	L2	2566	3384	-3	7
chr11	107159580	107159581	chunk0039_390_1	14.1584	AR_DHT_Control	chr11	107157863	107160541	-27926081	+	MER21-int	LTR	ERVL	1416	4067	-124	7
chr11	107161845	107161846	chunk0039_393_1	250.80157	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	107160662	107162751	-27923871	+	L1MA7	LINE	L1	4125	6285	-6	7
chr11	107425485	107425486	chunk0039_402_1	25.13246	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	107425290	107425618	-27661004	+	Tigger3a	DNA	TcMar-Tigger	2	347	-1	7
chr11	107486915	107486916	chunk0039_407_1	34.7881	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	107486436	107487034	-27599588	+	L1ME4b	LINE	L1	3613	4249	-1897	7
chr11	107499461	107499462	chunk0039_409_1	25.5232	AR_DHT_Control	chr11	107499125	107499484	-27587138	-	LTR47B2	LTR	ERVL	0	434	2	7
chr11	107500955	107500956	chunk0039_410_1	5.70484	AR_DHT_Control	chr11	107500110	107501542	-27585080	+	L1ME1	LINE	L1	4697	6169	-10	7
chr11	107508111	107508112	chunk0039_411_1	32.9823	AR_DHT_Control	chr11	107508067	107508134	-27578488	+	L2c	LINE	L2	3269	3339	-48	7
chr11	107582585	107582586	chunk0039_415_1	7.22694	AR_DHT_Control	chr11	107582516	107582621	-27504001	-	MER5A	DNA	hAT-Charlie	-2	187	86	7
chr11	107689681	107689682	chunk0039_416_1	5.52722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	107689565	107689706	-27396916	+	L2b	LINE	L2	3235	3370	-5	7
chr11	107751068	107751069	chunk0039_420_1	44.3227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	107751033	107751299	-27335323	+	L1MC4a	LINE	L1	6391	6728	-1057	7
chr11	107826119	107826120	chunk0039_423_1	77.2689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	107825936	107826278	-27260344	+	L1MC5	LINE	L1	6974	7357	-1947	7
chr11	107900799	107900800	chunk0039_431_1	32.3248	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	107900592	107900842	-27185780	+	HAL1	LINE	L1	12	250	-2257	7
chr11	108016715	108016716	chunk0039_436_1	7.92341	AR_DHT_Control	chr11	108016678	108016792	-27069830	+	AluJr	SINE	Alu	1	124	-188	7
chr11	108034280	108034281	chunk0039_437_1	6.23615	AR_DHT_Control	chr11	108034035	108034536	-27052086	-	MER68	LTR	ERVL	-4	559	22	7
chr11	108067531	108067532	chunk0039_438_1	6.18774	AR_DHT_Control	chr11	108067393	108067586	-27019036	-	MER112	DNA	hAT-Charlie	-28	233	39	7
chr11	108093571	108093572	chunk0039_440_1	58.4202	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108093168	108093719	-26992903	-	Tigger6a	DNA	TcMar-Tigger	-274	809	249	7
chr11	108124858	108124859	chunk0039_441_1	7.02986	AR_DHT_Control	chr11	108124581	108124952	-26961670	+	L2a	LINE	L2	2743	3178	-248	7
chr11	108235410	108235411	chunk0039_442_1	93.5953	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108235345	108235546	-26851076	-	MER58A	DNA	hAT-Charlie	-1	223	2	7
chr11	108316428	108316429	chunk0039_444_1	10.5201	AR_DHT_Control	chr11	108316394	108316461	-26770161	-	MIRb	SINE	MIR	-14	254	188	7
chr11	108341097	108341098	chunk0039_446_1	9.28589	AR_DHT_Control	chr11	108341005	108341550	-26745072	+	L2a	LINE	L2	2828	3426	0	7
chr11	108370898	108370899	chunk0039_450_1	30.2667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	108370879	108371225	-26715397	-	MER99	DNA	hAT?	0	831	456	7
chr11	108524739	108524740	chunk0039_453_1	34.81894	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	108524409	108524832	-26561790	-	MamRTE1	LINE	RTE-BovB	-1021	2791	2341	7
chr11	108534623	108534624	chunk0039_455_1	95.40838	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	108534423	108534754	-26551868	+	L2c	LINE	L2	2920	3277	-110	7
chr11	108621085	108621086	chunk0040_8_1	6.6833	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108621047	108621222	-26465400	-	Charlie29a	DNA	hAT-Charlie	-337	382	193	7
chr11	108649242	108649243	chunk0040_9_1	8.41723	AR_DHT_Control	chr11	108647374	108650248	-26436374	+	L1M1	LINE	L1	16	3744	-3821	7
chr11	108736319	108736320	chunk0040_13_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108736291	108736327	-26350295	+	(GT)n	Simple_repeat	Simple_repeat	1	38	0	7
chr11	108817960	108817961	chunk0040_16_1	31.72116	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	108817692	108817963	-26268659	-	L4_B_Mam	LINE	RTE-X	-6	4935	4621	7
chr11	109738914	109738915	chunk0040_22_1	5.73469	AR_DHT_Control	chr11	109738149	109739187	-25347435	-	Tigger6a	DNA	TcMar-Tigger	-1	1082	1	7
chr11	110207719	110207720	chunk0040_27_1	56.3712	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	110207551	110207848	-24878774	+	MER58B	DNA	hAT-Charlie	19	333	-8	7
chr11	110295316	110295317	chunk0040_30_1	5.79085	AR_DHT_Control	chr11	110295308	110295330	-24791292	+	(A)n	Simple_repeat	Simple_repeat	1	22	0	7
chr11	110356149	110356150	chunk0040_34_1	9.80886	AR_DHT_Control	chr11	110356064	110356221	-24730401	-	MIRb	SINE	MIR	-120	148	2	7
chr11	110445659	110445660	chunk0040_35_1	15.00252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	110445644	110445852	-24640770	+	MIR	SINE	MIR	36	230	0	7
chr11	110695800	110695801	chunk0040_41_1	37.75934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	110695112	110696324	-24390298	+	L1MB8	LINE	L1	4906	6153	-25	7
chr11	110775526	110775527	chunk0040_46_1	185.9267	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	110775510	110775587	-24311035	+	MIRc	SINE	MIR	5	81	-187	7
chr11	110832231	110832232	chunk0040_49_1	16.3678	AR_DHT_Control	chr11	110832159	110832528	-24254094	-	L2a	LINE	L2	0	3426	3060	7
chr11	111138091	111138092	chunk0040_52_1	251.5405	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr11	111138036	111138326	-23948296	-	Mam_R4	LINE	Dong-R4	-3190	619	330	7
chr11	111171874	111171875	chunk0040_56_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111171827	111172061	-23914561	-	Tigger17b	DNA	TcMar-Tigger	0	1073	816	7
chr11	111232490	111232491	chunk0040_63_1	26.8328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111232467	111232794	-23853828	-	L2c	LINE	L2	-9	3378	3032	7
chr11	111237405	111237406	chunk0040_64_1	81.0371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111237099	111237629	-23848993	+	L1ME4b	LINE	L1	244	762	-130	7
chr11	111253299	111253300	chunk0040_66_1	24.31702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	111253293	111253362	-23833260	+	Charlie17a	DNA	hAT-Charlie	130	198	-19	7
chr11	111402563	111402564	chunk0040_81_1	12.8831	AR_DHT_Control	chr11	111402490	111402609	-23684013	+	L2a	LINE	L2	3307	3426	0	7
chr11	111430415	111430416	chunk0040_83_1	29.6096	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111430076	111430676	-23655946	-	MER4A	LTR	ERV1	0	664	7	7
chr11	111446654	111446655	chunk0040_85_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	111446624	111446655	-23639967	+	(AC)n	Simple_repeat	Simple_repeat	1	31	0	7
chr11	111682878	111682879	chunk0040_93_1	8.7059	AR_DHT_Control	chr11	111682877	111683111	-23403511	-	Charlie10	DNA	hAT-Charlie	-47	2775	2549	7
chr11	111694001	111694002	chunk0040_95_1	18.8726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	111693849	111694092	-23392530	+	MIR	SINE	MIR	2	257	-5	7
chr11	111800661	111800662	chunk0040_103_1	49.4192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	111800620	111800845	-23285777	+	L2b	LINE	L2	3190	3421	-5	7
chr11	112013514	112013515	chunk0040_114_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	112013375	112013522	-23073100	+	L2c	LINE	L2	3229	3385	-2	7
chr11	112221620	112221621	chunk0040_119_1	4.88663	AR_DHT_Control	chr11	112221308	112221689	-22864933	+	L2b	LINE	L2	2914	3363	-12	7
chr11	112293829	112293830	chunk0040_122_1	11.51754	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	112293533	112293945	-22792677	+	MLT1J1	LTR	ERVL-MaLR	30	444	0	7
chr11	112307784	112307785	chunk0040_124_1	10.2576	AR_DHT_Control	chr11	112307713	112307948	-22778674	+	MIRb	SINE	MIR	15	256	-6	7
chr11	112310227	112310228	chunk0040_125_1	14.44096	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	112310159	112310315	-22776307	-	L2c	LINE	L2	0	3387	3215	7
chr11	112318670	112318671	chunk0040_126_1	7.94333	AR_DHT_Control	chr11	112318379	112318940	-22767682	+	MER89	LTR	ERV1	1	557	-2	7
chr11	112479605	112479606	chunk0040_132_1	8.73763	AR_DHT_Control	chr11	112479495	112479696	-22606926	-	L1M4	LINE	L1	-362	5761	5534	7
chr11	112517474	112517475	chunk0040_135_1	6.3126	AR_DHT_Control	chr11	112517447	112517719	-22568903	+	L1PA16	LINE	L1	4749	5024	-1122	7
chr11	112566379	112566380	chunk0040_139_1	12.7273	AR_DHT_Control	chr11	112566250	112566403	-22520219	+	L2a	LINE	L2	3280	3421	-5	7
chr11	112925651	112925652	chunk0040_142_1	7.09019	AR_DHT_Control	chr11	112925049	112926033	-22160589	-	HERVK3-int	LTR	ERVK	0	7202	6222	7
chr11	113322933	113322934	chunk0040_143_1	19.74	AR_DHT_Control	chr11	113322875	113323042	-21763580	+	L2c	LINE	L2	3206	3385	-2	7
chr11	113377002	113377003	chunk0040_147_1	21.51835	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	113376969	113377202	-21709420	-	L2b	LINE	L2	-20	3355	3119	7
chr11	113565868	113565869	chunk0040_149_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	113565806	113565948	-21520674	+	LTR107_Mam	LTR	LTR	407	570	0	7
chr11	113571703	113571704	chunk0040_150_1	103.27567	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	113571566	113572391	-21514231	+	HAL1	LINE	L1	1629	2470	-37	7
chr11	113645331	113645332	chunk0040_152_1	5.46037	AR_DHT_Control	chr11	113645307	113645489	-21441133	+	MIRb	SINE	MIR	29	238	-30	7
chr11	113762058	113762059	chunk0040_154_1	62.801	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	113762039	113762526	-21324096	-	Tigger3	DNA	TcMar-Tigger	0	3029	2498	7
chr11	113838608	113838609	chunk0040_161_1	16.74003	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	113838289	113838855	-21247767	+	L2a	LINE	L2	2750	3394	-32	7
chr11	113849551	113849552	chunk0040_162_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	113847829	113849952	-21236670	+	MER21-int	LTR	ERVL	919	3085	-1106	7
chr11	113857536	113857537	chunk0040_163_1	22.6433	AR_DHT_Control	chr11	113857023	113857701	-21228921	-	Kanga1c	DNA	TcMar-Tc2	-4	725	4	7
chr11	114001711	114001712	chunk0040_173_1	20.97364	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	114001327	114001773	-21084849	+	LTR16B2	LTR	ERVL	1	457	-5	7
chr11	114013944	114013945	chunk0040_174_1	11.75084	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	114013839	114014135	-21072487	+	AluJb	SINE	Alu	2	300	-12	7
chr11	114423940	114423941	chunk0040_228_1	35.3652	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	114423473	114424852	-20661770	-	L1M1	LINE	L1	-3937	3628	2222	7
chr11	114459824	114459825	chunk0040_232_1	7.52656	AR_DHT_Control	chr11	114459474	114459870	-20626752	-	L2a	LINE	L2	-5	3421	2955	7
chr11	114460538	114460539	chunk0040_234_1	17.46877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	114460537	114460815	-20625807	-	L1M5	LINE	L1	-1066	5080	4797	7
chr11	114478300	114478301	chunk0040_235_1	149.3634	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	114478077	114478541	-20608081	-	MER67C	LTR	ERV1	-234	477	1	7
chr11	114504338	114504339	chunk0040_238_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	114503830	114504536	-20582086	+	L1PA13	LINE	L1	479	1255	-5530	7
chr11	114554292	114554293	chunk0040_239_1	7.58612	AR_DHT_Control	chr11	114554167	114554323	-20532299	+	MLT1J1	LTR	ERVL-MaLR	35	189	-323	7
chr11	114662633	114662634	chunk0040_240_1	4.96282	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	114661966	114663286	-20423336	+	L1M1	LINE	L1	16	1446	-6119	7
chr11	114682273	114682274	chunk0040_241_1	6.86304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	114681655	114682757	-20403865	-	MER4-int	LTR	ERV1	-1633	4965	3837	7
chr11	115830811	115830812	chunk0040_254_1	8.08101	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	115830693	115832173	-19254449	+	(CTGTACA)n	Simple_repeat	Simple_repeat	1	1739	0	7
chr11	116028833	116028834	chunk0040_259_1	37.9119	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	116023288	116029763	-19056859	+	L1PB1	LINE	L1	261	6864	-3	7
chr11	116058958	116058959	chunk0040_261_1	10.0576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	116058760	116059401	-19027221	-	L1M5	LINE	L1	-1020	5126	4486	7
chr11	116177946	116177947	chunk0040_265_1	25.3616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	116177887	116178382	-18908240	+	MLT2B4	LTR	ERVL	2	513	-43	7
chr11	116667511	116667512	chunk0040_271_1	16.3135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	116666718	116672862	-18413760	+	L1PA6	LINE	L1	174	6325	-2	7
chr11	116723323	116723324	chunk0040_272_1	17.5189	AR_DHT_Control	chr11	116722983	116723389	-18363233	+	L2c	LINE	L2	2910	3387	0	7
chr11	116774275	116774276	chunk0040_275_1	32.0795	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	116774080	116774352	-18312270	-	L1MA9	LINE	L1	0	6312	6017	7
chr11	116808425	116808426	chunk0040_276_1	58.8367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	116808360	116808566	-18278056	-	MIRb	SINE	MIR	-21	247	10	7
chr11	116944279	116944280	chunk0040_285_1	5.91555	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	116944177	116944865	-18141757	+	MER77B	LTR	ERVL	6	700	0	7
chr11	116946628	116946629	chunk0040_286_1	154.03454	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	116946255	116946698	-18139924	-	LTR40b	LTR	ERVL	-15	447	1	7
chr11	117071485	117071486	chunk0040_291_1	303.9807	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	117071440	117071554	-18015068	+	L2b	LINE	L2	3254	3370	-5	7
chr11	117148455	117148456	chunk0040_297_1	14.1597	AR_DHT_Control	chr11	117148395	117148573	-17938049	+	MIR	SINE	MIR	26	256	-6	7
chr11	117176343	117176344	chunk0040_299_1	64.2702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	117176287	117176393	-17910229	+	L2a	LINE	L2	3273	3426	0	7
chr11	117232767	117232768	chunk0040_305_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	117232757	117232873	-17853749	+	G-rich	Low_complexity	Low_complexity	1	116	0	7
chr11	117256325	117256326	chunk0040_306_1	9.14794	AR_DHT_Control	chr11	117256284	117256849	-17829773	-	MLT1H1	LTR	ERVL-MaLR	0	555	1	7
chr11	117368056	117368057	chunk0040_307_1	8.75738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	117368054	117368274	-17718348	-	L2b	LINE	L2	-10	3365	3096	7
chr11	117985213	117985214	chunk0040_318_1	9.5124	AR_DHT_Control	chr11	117984780	117985418	-17101204	-	LTR38C	LTR	ERV1	0	711	21	7
chr11	118042187	118042188	chunk0040_319_1	40.815	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	118042069	118043247	-17043375	+	L1MB7	LINE	L1	3951	5102	-1904	7
chr11	118127609	118127610	chunk0040_322_1	9.99928	AR_DHT_Control	chr11	118127397	118127685	-16958937	-	L1ME1	LINE	L1	-12	6167	5864	7
chr11	118298365	118298366	chunk0040_330_1	33.7476	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	118297895	118298857	-16787765	+	ERV3-16A3_I-int	LTR	ERVL	1607	2685	-2541	7
chr11	118516721	118516722	chunk0040_342_1	25.15719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	118516550	118516722	-16569900	+	L2a	LINE	L2	3274	3426	0	7
chr11	118530386	118530387	chunk0040_345_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	118530368	118530520	-16556102	+	MIRb	SINE	MIR	8	186	-82	7
chr11	118646485	118646486	chunk0040_351_1	15.18461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	118646365	118646609	-16440013	+	Tigger20a	DNA	TcMar-Tigger	2	250	-723	7
chr11	118733603	118733604	chunk0040_353_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	118733522	118733688	-16352934	+	LTR39	LTR	ERV1	617	782	-1	7
chr11	119230781	119230782	chunk0040_377_1	137.2154	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	119230623	119230796	-15855826	-	L1MEd	LINE	L1	-1154	4992	4797	7
chr11	119329655	119329656	chunk0040_378_1	12.4453	AR_DHT_Control	chr11	119329315	119330206	-15756416	+	L1MC1	LINE	L1	5268	6179	-154	7
chr11	119590671	119590672	chunk0040_383_1	80.2341	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	119590382	119591118	-15495504	-	MER21C	LTR	ERVL	-132	806	9	7
chr11	119749902	119749903	chunk0040_389_1	9.00107	AR_DHT_Control	chr11	119749753	119749946	-15336676	+	MIRb	SINE	MIR	43	240	-28	7
chr11	119960667	119960668	chunk0040_390_1	7.58612	AR_DHT_Control	chr11	119959935	119961009	-15125613	+	L1MEh	LINE	L1	701	1963	-544	7
chr11	120146581	120146582	chunk0040_392_1	14.1972	AR_DHT_Control	chr11	120146407	120146670	-14939952	-	MIR	SINE	MIR	0	262	1	7
chr11	120382239	120382240	chunk0040_397_1	27.5287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	120380164	120382246	-14704376	-	L1MC3	LINE	L1	-10	7775	5595	7
chr11	120525990	120525991	chunk0040_401_1	35.8576	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	120525782	120526004	-14560618	+	MIRc	SINE	MIR	2	241	-27	7
chr11	121049066	121049067	chunk0040_408_1	17.03319	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	121048825	121049150	-14037472	+	L2c	LINE	L2	3030	3387	0	7
chr11	121132359	121132360	chunk0040_416_1	72.0434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	121131290	121132715	-13953907	-	L1MC4	LINE	L1	0	8042	6553	7
chr11	121258172	121258173	chunk0040_420_1	36.7234	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	121257939	121258512	-13828110	+	L2c	LINE	L2	2293	2892	-527	7
chr11	121300501	121300502	chunk0040_424_1	262.3957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	121300075	121301621	-13785001	+	L1M4	LINE	L1	2	1664	-5853	7
chr11	121409134	121409135	chunk0040_430_1	4.83532	AR_DHT_Control	chr11	121408731	121409438	-13677184	-	LTR49-int	LTR	ERV1	-783	5548	4842	7
chr11	121568136	121568137	chunk0040_445_1	8.1827	AR_DHT_Control	chr11	121567923	121568181	-13518441	-	AluJo	SINE	Alu	-30	282	6	7
chr11	121585803	121585804	chunk0040_446_1	33.0871	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	121585554	121586209	-13500413	-	L1ME4b	LINE	L1	-36	856	247	7
chr11	121649908	121649909	chunk0040_450_1	34.4541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	121649900	121650086	-13436536	-	L2a	LINE	L2	-1	3425	3234	7
chr11	121688725	121688726	chunk0040_453_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	121688671	121688876	-13397746	+	Charlie5	DNA	hAT-Charlie	2419	2624	0	7
chr11	122461978	122461979	chunk0040_455_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	122461224	122468126	-12618496	+	L1MA4A	LINE	L1	718	7702	-20	7
chr11	122571723	122571724	chunk0041_44_1	23.81734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	122571568	122571888	-12514734	+	L2c	LINE	L2	3044	3386	-1	7
chr11	123046660	123046661	chunk0041_46_1	11.1716	AR_DHT_Control	chr11	123046613	123046930	-12039692	+	L2c	LINE	L2	3029	3342	-45	7
chr11	123202497	123202498	chunk0041_49_1	4.84918	AR_DHT_Control	chr11	123202491	123202652	-11883970	-	MIR3	SINE	MIR	-19	189	19	7
chr11	123487223	123487224	chunk0041_64_1	37.0258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	123487089	123487280	-11599342	-	MIRb	SINE	MIR	-16	252	59	7
chr11	123639814	123639815	chunk0041_66_1	6.86304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	123639677	123639843	-11446779	+	L2c	LINE	L2	3197	3386	-1	7
chr11	123678049	123678050	chunk0041_70_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	123678018	123678559	-11408063	+	LTR33C	LTR	ERVL	14	569	-60	7
chr11	123744512	123744513	chunk0041_71_1	10.9705	AR_DHT_Control	chr11	123744367	123745121	-11341501	-	L1ME3G	LINE	L1	-88	836	2	7
chr11	123833617	123833618	chunk0041_72_1	44.51834	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	123833093	123834098	-11252524	+	L1MA9	LINE	L1	5232	6236	-76	7
chr11	124111593	124111594	chunk0041_77_1	25.6452	AR_DHT_Control	chr11	124111453	124111655	-10974967	+	MIRb	SINE	MIR	3	210	-58	7
chr11	124167997	124167998	chunk0041_78_1	8.82835	AR_DHT_Control	chr11	124167904	124168393	-10918229	-	LTR22B	LTR	ERVK	-4	488	1	7
chr11	124233601	124233602	chunk0041_80_1	52.66223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	124233364	124234490	-10852132	-	L1ME3	LINE	L1	-30	6132	4966	7
chr11	124705154	124705155	chunk0041_100_1	10.3174	AR_DHT_Control	chr11	124704553	124705332	-10381290	+	SVA_D	Retroposon	SVA	596	1368	-18	7
chr11	124823871	124823872	chunk0041_104_1	7.58612	AR_DHT_Control	chr11	124823775	124824459	-10262163	+	MER50	LTR	ERV1	1	718	-16	7
chr11	124904025	124904026	chunk0041_111_1	11.7357	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	124903760	124904613	-10182009	-	L1M5	LINE	L1	-1881	4265	3370	7
chr11	124961145	124961146	chunk0041_115_1	38.3722	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	124961086	124961187	-10125435	-	L2a	LINE	L2	-1	3425	3312	7
chr11	124968102	124968103	chunk0041_117_1	51.0623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	124962648	124968793	-10117829	-	L1PA6	LINE	L1	0	6327	174	7
chr11	124984330	124984331	chunk0041_118_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	124981920	124984944	-10101678	-	L1PA15	LINE	L1	-3629	3137	13	7
chr11	125019703	125019704	chunk0041_121_1	22.34005	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	125019641	125019819	-10066803	-	L2c	LINE	L2	-838	2581	2389	7
chr11	125026308	125026309	chunk0041_123_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	125025981	125026646	-10059976	-	L1M1	LINE	L1	-6848	717	8	7
chr11	125037299	125037300	chunk0041_124_1	17.0078	AR_DHT_Control	chr11	125035327	125037857	-10048765	-	L1M1	LINE	L1	-3750	3815	1285	7
chr11	125069201	125069202	chunk0041_129_1	8.71584	AR_DHT_Control	chr11	125069144	125069332	-10017290	-	MIRb	SINE	MIR	-62	206	18	7
chr11	125211349	125211350	chunk0041_132_1	34.5351	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	125211335	125211600	-9875022	-	L2a	LINE	L2	-2	3424	3141	7
chr11	125301052	125301053	chunk0041_139_1	95.6239	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	125300894	125301055	-9785567	+	MIR3	SINE	MIR	5	166	-42	7
chr11	125329583	125329584	chunk0041_141_1	18.63212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	125329487	125329861	-9756761	-	L2c	LINE	L2	-56	3331	2919	7
chr11	125564619	125564620	chunk0041_146_1	16.4902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	125564579	125565301	-9521321	-	MER4B-int	LTR	ERV1	-1566	5192	4452	7
chr11	125872336	125872337	chunk0041_154_1	5.50529	AR_DHT_Control	chr11	125871922	125872500	-9214122	-	LTR10A	LTR	ERV1	-48	561	1	7
chr11	126102619	126102620	chunk0041_170_1	9.68961	AR_DHT_Control	chr11	126102470	126102829	-8983793	-	L2b	LINE	L2	-2	3373	3000	7
chr11	126327821	126327822	chunk0041_182_1	12.2543	AR_DHT_Control	chr11	126327772	126328221	-8758401	-	L2a	LINE	L2	0	3426	2917	7
chr11	126335543	126335544	chunk0041_183_1	13.9169	AR_DHT_Control	chr11	126335522	126335646	-8750976	+	MIRc	SINE	MIR	38	154	-114	7
chr11	126437267	126437268	chunk0041_191_1	5.44099	AR_DHT_Control	chr11	126437152	126438029	-8648593	+	(CA)n	Simple_repeat	Simple_repeat	1	910	0	7
chr11	126484440	126484441	chunk0041_195_1	16.17943	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	126484348	126484545	-8602077	-	MIR	SINE	MIR	0	262	58	7
chr11	127206116	127206117	chunk0041_215_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	127205195	127209650	-7876972	+	L1PA14	LINE	L1	8	4205	-2468	7
chr11	127230232	127230233	chunk0041_216_1	15.9612	AR_DHT_Control	chr11	127229976	127230534	-7856088	-	Charlie29a	DNA	hAT-Charlie	-58	661	103	7
chr11	127412612	127412613	chunk0041_217_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	127411226	127413202	-7673420	-	MER52D	LTR	ERV1	-24	2099	8	7
chr11	127658752	127658753	chunk0041_220_1	9.63462	AR_DHT_Control	chr11	127658492	127658843	-7427779	+	Tigger6a	DNA	TcMar-Tigger	1	320	-763	7
chr11	127688774	127688775	chunk0041_221_1	23.8404	AR_DHT_Control	chr11	127688397	127690145	-7396477	-	L1MA10	LINE	L1	-2	6332	4600	7
chr11	128282323	128282324	chunk0041_228_1	32.04487	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	128282052	128282703	-6803919	+	Tigger17a	DNA	TcMar-Tigger	1	637	-17	7
chr11	128413536	128413537	chunk0041_232_1	42.3732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	128413105	128414441	-6672181	+	LTR37-int	LTR	ERV1	1	1328	-2732	7
chr11	128608049	128608050	chunk0041_244_1	89.4892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	128607699	128608056	-6478566	+	MLT1I	LTR	ERVL-MaLR	17	411	0	7
chr11	128761350	128761351	chunk0041_247_1	14.7449	AR_DHT_Control	chr11	128760848	128761386	-6325236	+	L2a	LINE	L2	2639	3247	-179	7
chr11	128881441	128881442	chunk0041_251_1	271.062	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	128881413	128881657	-6204965	+	MamRep605	LTR?	LTR?	443	707	-142	7
chr11	129048978	129048979	chunk0041_262_1	10.8743	AR_DHT_Control	chr11	129048960	129049228	-6037394	-	L2	LINE	L2	-427	2992	2704	7
chr11	129055411	129055412	chunk0041_263_1	161.6756	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	129055243	129055962	-6030660	+	L1MC2	LINE	L1	5454	6195	-149	7
chr11	129100785	129100786	chunk0041_266_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	129099751	129103193	-5983429	+	L1MB3	LINE	L1	1	6567	-236	7
chr11	129113377	129113378	chunk0041_267_1	51.051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	129112526	129113714	-5972908	-	Tigger2	DNA	TcMar-Tigger	-1534	1184	1	7
chr11	129233995	129233996	chunk0041_272_1	39.0433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	129233372	129234113	-5852509	+	L1ME3Cz	LINE	L1	261	992	-5	7
chr11	129410598	129410599	chunk0041_285_1	7.24914	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	129410547	129410691	-5675931	-	HAL1ME	LINE	L1	-1680	785	646	7
chr11	129453444	129453445	chunk0041_287_1	73.616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	129453371	129453556	-5633066	+	Tigger19a	DNA	TcMar-Tigger	118	323	0	7
chr11	129586316	129586317	chunk0041_294_1	36.4437	AR_DHT_Control	chr11	129586254	129586407	-5500215	+	MER5B	DNA	hAT-Charlie	21	176	-2	7
chr11	129779631	129779632	chunk0041_301_1	14.03215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	129779188	129779826	-5306796	-	MER61F	LTR	ERV1	-36	640	1	7
chr11	129808497	129808498	chunk0041_304_1	72.0556	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	129802985	129808592	-5278030	+	L1PB1	LINE	L1	252	6020	-842	7
chr11	129836427	129836428	chunk0041_306_1	11.1716	AR_DHT_Control	chr11	129836136	129836477	-5250145	+	MLT1B-int	LTR	ERVL-MaLR	1017	1369	-2	7
chr11	130239437	130239438	chunk0041_326_1	27.31995	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	130239380	130239579	-4847043	-	MER58A	DNA	hAT-Charlie	-6	218	1	7
chr11	130243079	130243080	chunk0041_329_1	91.1598	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr11	130242136	130243416	-4843206	-	L1ME3B	LINE	L1	-4224	2018	629	7
chr11	130535724	130535725	chunk0041_333_1	28.68121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	130535588	130535985	-4550637	+	MER57B2	LTR	ERV1	2	403	0	7
chr11	130551804	130551805	chunk0041_335_1	8.71732	AR_DHT_Control	chr11	130551792	130552009	-4534613	+	L1MA9	LINE	L1	6060	6269	-43	7
chr11	130571247	130571248	chunk0041_337_1	27.4848	AR_DHT_Control	chr11	130571210	130571397	-4515225	-	MER58A	DNA	hAT-Charlie	0	224	9	7
chr11	130592998	130592999	chunk0041_338_1	15.5336	AR_DHT_Control	chr11	130592498	130593714	-4492908	-	ERV3-16A3_I-int	LTR	ERVL	-3989	1237	1	7
chr11	130645567	130645568	chunk0041_340_1	5.85263	AR_DHT_Control	chr11	130645364	130645849	-4440773	+	L2c	LINE	L2	2919	3382	-5	7
chr11	130769942	130769943	chunk0041_354_1	17.37057	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	130769890	130770122	-4316500	-	MIR	SINE	MIR	-1	261	1	7
chr11	131310421	131310422	chunk0041_365_1	16.1511	AR_DHT_Control	chr11	131310419	131310736	-3775886	-	L2b	LINE	L2	-1	3374	3045	7
chr11	131415976	131415977	chunk0041_368_1	394.1577	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr11	131415958	131416148	-3670474	+	MER53	DNA	hAT	1	189	-4	7
chr11	131703489	131703490	chunk0041_376_1	10.0841	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	131703367	131703527	-3383095	+	L1MC5	LINE	L1	5027	5189	-957	7
chr11	131897442	131897443	chunk0041_378_1	8.55856	AR_DHT_Control	chr11	131897426	131897518	-3189104	-	MIR1_Amn	SINE	MIR	-61	169	79	7
chr11	131938795	131938796	chunk0041_380_1	18.33655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	131938033	131939417	-3147205	-	L2a	LINE	L2	-1	3425	1964	7
chr11	131949233	131949234	chunk0041_382_1	12.375	AR_DHT_Control	chr11	131948823	131949323	-3137299	-	L1MB1	LINE	L1	-1	6167	5681	7
chr11	132739263	132739264	chunk0041_389_1	13.6098	AR_DHT_Control	chr11	132738891	132739431	-2347191	+	MER34A1	LTR	ERV1	1	582	-5	7
chr11	133868727	133868728	chunk0041_407_1	38.0444	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	133868656	133869029	-1217593	-	L1M4a2	LINE	L1	-552	2200	1825	7
chr11	133901961	133901962	chunk0041_408_1	5.73469	AR_DHT_Control	chr11	133901788	133902587	-1184035	+	(CA)n	Simple_repeat	Simple_repeat	1	866	0	7
chr11	134022870	134022871	chunk0041_415_1	9.79111	AR_DHT_Control	chr11	134022663	134023016	-1063606	+	LTR86B1	LTR	ERVL	1	359	-134	7
chr11	134228048	134228049	chunk0041_416_1	236.9965	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	134228037	134228218	-858404	-	Tigger19b	DNA	TcMar-Tigger	-2	548	443	7
chr11	134355893	134355894	chunk0041_427_1	200.5986	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	134353426	134356184	-730438	-	L1MB3	LINE	L1	-3397	3703	360	7
chr11	134407087	134407088	chunk0041_432_1	7.3267	AR_DHT_Control	chr11	134406992	134407114	-679508	+	MER3	DNA	hAT-Charlie	6	127	-82	7
chr11	134527561	134527562	chunk0041_439_1	327.8833	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	134527489	134527677	-558945	-	MER53	DNA	hAT	-3	190	1	7
chr11	134565616	134565617	chunk0041_441_1	17.0716	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr11	134565510	134565750	-520872	+	(ATGATG)n	Simple_repeat	Simple_repeat	3	243	0	7
chr11	134592412	134592413	chunk0041_442_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	134592376	134592872	-493750	-	LTR53B	LTR	ERVL	0	533	1	7
chr11	134608510	134608511	chunk0041_443_1	6.3126	AR_DHT_Control	chr11	134608286	134608527	-478095	+	L2a	LINE	L2	3184	3426	0	7
chr11	134703419	134703420	chunk0041_444_1	27.1074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr11	134703150	134703636	-382986	-	MER34A	LTR	ERV1	-10	697	1	7
chr11	134850036	134850037	chunk0041_448_1	6.26854	AR_DHT_Control	chr11	134849957	134850179	-236443	+	MER58A	DNA	hAT-Charlie	1	224	0	7
chr11	134980232	134980233	chunk0041_450_1	6.13992	AR_DHT_Control	chr11	134980215	134980373	-106249	+	L2a	LINE	L2	3259	3424	-2	7
chr11	135022077	135022078	chunk0041_451_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr11	135021793	135022296	-64326	-	LTR53	LTR	ERVL	-1	518	2	7
chr12	53784	53785	chunk0041_1_1	6.78837	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	53592	53867	-133221442	+	L3	LINE	CR1	3804	4098	-1	7
chr12	309512	309513	chunk0041_9_1	7.83042	AR_DHT_Control	chr12	309242	309521	-132965788	+	MER6	DNA	TcMar-Tigger	574	865	0	7
chr12	338139	338140	chunk0041_10_1	7.74643	AR_DHT_Control	chr12	338080	338625	-132936684	+	MER68	LTR	ERVL	1	563	0	7
chr12	415057	415058	chunk0041_15_1	35.188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	415054	415093	-132860216	+	MER21C	LTR	ERVL	228	266	-672	7
chr12	419334	419335	chunk0041_16_1	60.842	AR_DHT_Control	chr12	419053	419376	-132855933	-	LTR16	LTR	ERVL	-4	434	92	7
chr12	456235	456236	chunk0041_19_1	11.2788	AR_DHT_Control	chr12	456088	456322	-132818987	+	MIRc	SINE	MIR	1	233	-35	7
chr12	744545	744546	chunk0041_28_1	42.7512	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	744485	744576	-132530733	-	L1ME1	LINE	L1	-989	6017	5949	7
chr12	775848	775849	chunk0041_31_1	17.61184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	775755	775924	-132499385	-	MIR	SINE	MIR	-30	232	58	7
chr12	818105	818106	chunk0041_32_1	36.2115	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	818007	818192	-132457117	-	L1MB5	LINE	L1	0	6174	5984	7
chr12	854849	854850	chunk0041_38_1	16.0458	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	854731	855038	-132420271	-	MER2	DNA	TcMar-Tigger	0	345	1	7
chr12	953499	953500	chunk0041_41_1	34.39307	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	953460	953591	-132321718	+	L1M5	LINE	L1	5571	5715	-479	7
chr12	1142657	1142658	chunk0042_9_1	31.0123	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	1142316	1142846	-132132463	-	L1ME4b	LINE	L1	-310	582	20	7
chr12	1220341	1220342	chunk0042_14_1	57.1257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	1219876	1220397	-132054912	+	L2a	LINE	L2	2806	3423	-3	7
chr12	1332497	1332498	chunk0042_21_1	10.1791	AR_DHT_Control	chr12	1332000	1332698	-131942611	-	HAL1ME	LINE	L1	-1086	1379	640	7
chr12	1396662	1396663	chunk0042_25_1	5.6425	AR_DHT_Control	chr12	1396658	1397057	-131878252	+	L1MEd	LINE	L1	161	566	-6537	7
chr12	1484412	1484413	chunk0042_31_1	12.8831	AR_DHT_Control	chr12	1484317	1484488	-131790821	-	L1ME4b	LINE	L1	-415	477	303	7
chr12	1537073	1537074	chunk0042_33_1	76.4179	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	1536903	1537239	-131738070	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	7
chr12	1571858	1571859	chunk0042_36_1	128.9607	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	1571850	1571964	-131703345	-	L2a	LINE	L2	-6	3420	3254	7
chr12	1768021	1768022	chunk0042_50_1	17.99683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	1767606	1768096	-131507213	-	MER110	LTR	ERV1	-18	596	1	7
chr12	1871295	1871296	chunk0042_55_1	9.22214	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	1871032	1871703	-131403606	+	(GT)n	Simple_repeat	Simple_repeat	1	702	0	7
chr12	1873815	1873816	chunk0042_56_1	50.1633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	1873810	1874015	-131401294	-	UCON105	Unknown	Unknown	-56	217	1	7
chr12	1980045	1980046	chunk0042_60_1	6.54253	AR_DHT_Control	chr12	1979848	1980308	-131295001	+	L1ME3	LINE	L1	5363	5841	-321	7
chr12	2142410	2142411	chunk0042_73_1	24.53	AR_DHT_Control	chr12	2142204	2142975	-131132334	+	Tigger3b	DNA	TcMar-Tigger	1	769	-462	7
chr12	2160297	2160298	chunk0042_74_1	8.22429	AR_DHT_Control	chr12	2160271	2160334	-131114975	+	L2b	LINE	L2	3316	3421	-5	7
chr12	2343123	2343124	chunk0042_83_1	170.644	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	2342910	2343162	-130932147	-	MIRb	SINE	MIR	-27	241	2	7
chr12	2491041	2491042	chunk0042_86_1	10.9285	AR_DHT_Control	chr12	2490948	2491398	-130783911	+	L1ME1	LINE	L1	5703	6170	-9	7
chr12	2662685	2662686	chunk0042_91_1	88.7109	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	2662271	2663239	-130612070	+	L1ME3C	LINE	L1	4225	5319	-895	7
chr12	2764585	2764586	chunk0042_94_1	26.0553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	2764571	2764766	-130510543	-	MIR	SINE	MIR	-48	214	12	7
chr12	2765151	2765152	chunk0042_95_1	9.53997	AR_DHT_Control	chr12	2765120	2765160	-130510149	+	(AC)n	Simple_repeat	Simple_repeat	1	40	0	7
chr12	3048266	3048267	chunk0042_104_1	26.72888	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	3048258	3048467	-130226842	-	L2a	LINE	L2	-19	3407	3200	7
chr12	3080723	3080724	chunk0042_108_1	7.58612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	3080634	3080816	-130194493	-	L1MB2	LINE	L1	-21	6162	5955	7
chr12	3179352	3179353	chunk0042_109_1	5.08049	AR_DHT_Control	chr12	3179336	3179508	-130095801	-	L3b	LINE	CR1	-153	5079	4873	7
chr12	3379123	3379124	chunk0042_125_1	22.0534	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	3378634	3379314	-129895995	+	L2a	LINE	L2	2735	3426	0	7
chr12	3740553	3740554	chunk0042_132_1	13.169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	3740395	3740614	-129534695	+	MIRc	SINE	MIR	22	239	-29	7
chr12	3791919	3791920	chunk0042_136_1	82.7287	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	3791702	3791951	-129483358	+	LTR50	LTR	ERVL	503	787	-8	7
chr12	3835082	3835083	chunk0042_141_1	14.6324	AR_DHT_Control	chr12	3835023	3835086	-129440223	+	L1M4b	LINE	L1	1717	1771	-5655	7
chr12	3851961	3851962	chunk0042_146_1	78.56617	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	3851135	3857278	-129418031	+	L1PA6	LINE	L1	174	6316	-11	7
chr12	3853834	3853835	chunk0042_148_1	14.42133	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	3851135	3857278	-129418031	+	L1PA6	LINE	L1	174	6316	-11	7
chr12	3863807	3863808	chunk0042_149_1	32.45581	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	3863494	3864073	-129411236	-	MER77	LTR	ERVL	0	604	12	7
chr12	3897166	3897167	chunk0042_155_1	10.0617	AR_DHT_Control	chr12	3897146	3897211	-129378098	+	L3	LINE	CR1	2454	2518	-1581	7
chr12	4071323	4071324	chunk0042_161_1	5.52722	AR_DHT_Control	chr12	4071253	4071334	-129203975	+	MARNA	DNA	TcMar-Mariner	418	500	-86	7
chr12	4082208	4082209	chunk0042_162_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	4082121	4082347	-129192962	-	AluJb	SINE	Alu	-6	306	81	7
chr12	4347147	4347148	chunk0042_163_1	13.2288	AR_DHT_Control	chr12	4346774	4347701	-128927608	+	L1MA2	LINE	L1	5366	6304	0	7
chr12	4449965	4449966	chunk0042_164_1	14.8326	AR_DHT_Control	chr12	4449754	4450012	-128825297	-	LTR88b	LTR	Gypsy?	-11	851	603	7
chr12	4707499	4707500	chunk0042_174_1	58.9712	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	4705847	4708576	-128566733	+	L1MCa	LINE	L1	814	4425	-1896	7
chr12	4736213	4736214	chunk0042_177_1	65.5525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	4735148	4736323	-128538986	+	L1M4b	LINE	L1	12	1641	-1798	7
chr12	4743674	4743675	chunk0042_178_1	7.36432	AR_DHT_Control	chr12	4743590	4743778	-128531531	+	MIR	SINE	MIR	10	197	-65	7
chr12	4845679	4845680	chunk0042_180_1	58.0391	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	4845526	4845687	-128429622	-	MER53	DNA	hAT	-3	190	4	7
chr12	5063279	5063280	chunk0042_186_1	6.84874	AR_DHT_Control	chr12	5063142	5063300	-128212009	-	MIR	SINE	MIR	-63	199	31	7
chr12	5173842	5173843	chunk0042_189_1	22.252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	5173784	5173843	-128101466	+	L2c	LINE	L2	3326	3425	-1	7
chr12	5252305	5252306	chunk0042_191_1	23.2772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	5252255	5252491	-128022818	-	MIR	SINE	MIR	-2	260	21	7
chr12	5260791	5260792	chunk0042_193_1	8.62865	AR_DHT_Control	chr12	5260402	5261406	-128013903	-	L2c	LINE	L2	-15	3372	2273	7
chr12	5328422	5328423	chunk0042_194_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	5328255	5328578	-127946731	-	L3	LINE	CR1	-930	3169	2832	7
chr12	5348259	5348260	chunk0042_196_1	59.4143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	5348181	5348277	-127927032	+	MIRc	SINE	MIR	136	254	-14	7
chr12	6005097	6005098	chunk0042_206_1	26.7569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	6004148	6005314	-127269995	+	L1MC4a	LINE	L1	3760	4913	-1301	7
chr12	6007265	6007266	chunk0042_207_1	8.03415	AR_DHT_Control	chr12	6006806	6008896	-127266413	+	L1MB1	LINE	L1	2705	4857	-1781	7
chr12	6072606	6072607	chunk0042_214_1	50.84014	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	6072590	6072672	-127202637	-	MIR1_Amn	SINE	MIR	-55	175	83	7
chr12	6237891	6237892	chunk0042_228_1	29.1667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	6237882	6237930	-127037379	+	(TTTG)n	Simple_repeat	Simple_repeat	1	50	0	7
chr12	6264958	6264959	chunk0042_230_1	71.1793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	6264887	6265199	-127010110	-	L2c	LINE	L2	-6	3381	3058	7
chr12	6267276	6267277	chunk0042_233_1	163.6011	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	6267206	6267430	-127007879	+	L1ME4b	LINE	L1	624	854	-38	7
chr12	6334964	6334965	chunk0042_240_1	18.3999	AR_DHT_Control	chr12	6334943	6335056	-126940253	+	L1ME3A	LINE	L1	6048	6165	-8	7
chr12	6342491	6342492	chunk0042_241_1	13.3755	AR_DHT_Control	chr12	6342299	6342544	-126932765	+	MIR	SINE	MIR	10	245	-17	7
chr12	6430970	6430971	chunk0042_249_1	228.0231	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	6430483	6431057	-126844252	+	L1ME3G	LINE	L1	91	697	-227	7
chr12	6497405	6497406	chunk0042_252_1	14.5084	AR_DHT_Control	chr12	6497281	6497611	-126777698	-	L1PA10	LINE	L1	-1	6167	5818	7
chr12	6533867	6533868	chunk0042_254_1	6.93824	AR_DHT_Control	chr12	6533856	6533900	-126741409	+	(CCCAGTG)n	Simple_repeat	Simple_repeat	1	48	0	7
chr12	6689208	6689209	chunk0042_260_1	15.25344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	6689167	6689214	-126586095	+	GA-rich	Low_complexity	Low_complexity	1	49	0	7
chr12	6888772	6888773	chunk0042_268_1	6.48643	AR_DHT_Control	chr12	6888388	6888786	-126386523	-	Tigger7	DNA	TcMar-Tigger	-989	1502	1104	7
chr12	7079486	7079487	chunk0042_279_1	39.9592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	7079475	7079696	-126195613	+	Charlie15b	DNA	hAT-Charlie	470	737	-324	7
chr12	7206245	7206246	chunk0042_280_1	6.29634	AR_DHT_Control	chr12	7206159	7206471	-126068838	+	MER58B	DNA	hAT-Charlie	1	341	0	7
chr12	7265536	7265537	chunk0042_281_1	90.6293	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	7265122	7265546	-126009763	-	LTR3B	LTR	ERVK	-4	433	1	7
chr12	7459817	7459818	chunk0042_287_1	95.3188	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	7459605	7460868	-125814441	+	L1M1	LINE	L1	16	1976	-5589	7
chr12	7602020	7602021	chunk0042_292_1	14.88306	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	7600508	7602645	-125672664	+	HERVP71A-int	LTR	ERV1	3364	5494	-2096	7
chr12	7704634	7704635	chunk0042_294_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	7704630	7704932	-125570377	-	AluSx4	SINE	Alu	-6	304	1	7
chr12	8351279	8351280	chunk0042_313_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	8350936	8351379	-124923930	+	L1M2	LINE	L1	6159	6622	-940	7
chr12	8482449	8482450	chunk0042_314_1	12.7163	AR_DHT_Control	chr12	8480146	8482655	-124792654	-	L1P2	LINE	L1	-3155	2991	499	7
chr12	8577740	8577741	chunk0042_315_1	6.13915	AR_DHT_Control	chr12	8577693	8577868	-124697441	-	MIR	SINE	MIR	-10	252	72	7
chr12	8655311	8655312	chunk0042_317_1	26.6654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	8655013	8655315	-124619994	+	AluSx1	SINE	Alu	1	312	0	7
chr12	8827993	8827994	chunk0042_318_1	16.47091	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	8827451	8828801	-124446508	-	L1MA3	LINE	L1	-5270	2295	918	7
chr12	9050912	9050913	chunk0042_320_1	4.56426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	9050410	9051639	-124223670	+	MER52C	LTR	ERV1	59	1180	-98	7
chr12	9066142	9066143	chunk0042_321_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	9065173	9066669	-124208640	+	MER52D	LTR	ERV1	490	2121	-2	7
chr12	9339633	9339634	chunk0042_323_1	6.65967	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	9339036	9339674	-123935635	-	MER89-int	LTR	ERV1	-5854	947	291	7
chr12	9354720	9354721	chunk0042_324_1	10.802	AR_DHT_Control	chr12	9354223	9354762	-123920547	-	LTR10A	LTR	ERV1	-64	545	1	7
chr12	9635301	9635302	chunk0042_325_1	6.48643	AR_DHT_Control	chr12	9634923	9635454	-123639855	+	MER67D	LTR	ERV1	1	510	-4	7
chr12	9673722	9673723	chunk0042_326_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	9672445	9674544	-123600765	-	L1PA10	LINE	L1	-4392	2091	10	7
chr12	9742875	9742876	chunk0042_330_1	29.87627	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	9742718	9742900	-123532409	-	L1M4	LINE	L1	-6690	827	641	7
chr12	9746543	9746544	chunk0042_332_1	15.1095	AR_DHT_Control	chr12	9746484	9746838	-123528471	+	L1MEg	LINE	L1	4012	4386	-1760	7
chr12	9770755	9770756	chunk0042_333_1	44.326	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	9770716	9771055	-123504254	+	MLT2B1	LTR	ERVL	1	338	-182	7
chr12	9801746	9801747	chunk0042_335_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	9800835	9801985	-123473324	-	L1PA8	LINE	L1	-5	6167	5016	7
chr12	9883382	9883383	chunk0042_339_1	6.73207	AR_DHT_Control	chr12	9883109	9883444	-123391865	-	L4_A_Mam	LINE	RTE-X	-195	4795	4422	7
chr12	10060582	10060583	chunk0042_346_1	7.3092	AR_DHT_Control	chr12	10059761	10060677	-123214632	+	L1MD1	LINE	L1	5197	6128	-114	7
chr12	10113341	10113342	chunk0042_350_1	42.8018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	10113010	10114305	-123161004	+	L1PB3	LINE	L1	5593	6922	-1	7
chr12	10254536	10254537	chunk0042_357_1	22.5949	AR_DHT_Control	chr12	10254452	10254606	-123020703	+	L1PREC2	LINE	L1	5188	5330	-816	7
chr12	10267495	10267496	chunk0042_359_1	32.4705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	10267408	10267552	-123007757	-	L2a	LINE	L2	-1	3425	3275	7
chr12	10362042	10362043	chunk0042_361_1	7.62275	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	10362000	10362095	-122913214	-	MLT1A	LTR	ERVL-MaLR	-275	99	1	7
chr12	10364673	10364674	chunk0042_362_1	4.89968	AR_DHT_Control	chr12	10364665	10364697	-122910612	+	(TGAGAG)n	Simple_repeat	Simple_repeat	1	32	0	7
chr12	10385461	10385462	chunk0042_364_1	11.4842	AR_DHT_Control	chr12	10385396	10385908	-122889401	+	L1MA5	LINE	L1	7191	7718	-1	7
chr12	10426774	10426775	chunk0042_368_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	10426727	10426853	-122848456	-	MLT1A1	LTR	ERVL-MaLR	-2	406	281	7
chr12	10541889	10541890	chunk0042_371_1	10.0392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	10541581	10541976	-122733333	+	L1M5	LINE	L1	5279	5725	-517	7
chr12	10623859	10623860	chunk0042_377_1	48	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	10623330	10623986	-122651323	+	Tigger13a	DNA	TcMar-Tigger	31	692	-79	7
chr12	10890297	10890298	chunk0042_390_1	4.44156	AR_DHT_Control	chr12	10890175	10890372	-122384937	-	MER68-int	LTR	ERVL	-2139	851	681	7
chr12	11040780	11040781	chunk0042_395_1	9.21264	AR_DHT_Control	chr12	11040718	11042620	-122232689	+	L1MA2	LINE	L1	3173	5052	-2513	7
chr12	11615733	11615734	chunk0042_405_1	6.48643	AR_DHT_Control	chr12	11615339	11616100	-121659209	+	MER31-int	LTR	ERV1	320	1008	-7199	7
chr12	11623612	11623613	chunk0042_407_1	129.5784	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	11623535	11623744	-121651565	+	MER31-int	LTR	ERV1	5896	6330	-1	7
chr12	11684211	11684212	chunk0042_409_1	156.3002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	11684058	11684219	-121591090	+	Kanga1d	DNA	TcMar-Tc2	294	392	-217	7
chr12	11696280	11696281	chunk0042_413_1	25.8387	AR_DHT_Control	chr12	11696177	11696361	-121578948	+	L2a	LINE	L2	3224	3426	0	7
chr12	11754535	11754536	chunk0042_416_1	13.468	AR_DHT_Control	chr12	11754495	11754655	-121520654	+	MIR3	SINE	MIR	16	201	-7	7
chr12	11842427	11842428	chunk0042_422_1	11.6322	AR_DHT_Control	chr12	11842407	11842440	-121432869	+	(AC)n	Simple_repeat	Simple_repeat	1	33	0	7
chr12	12025936	12025937	chunk0042_425_1	7.86105	AR_DHT_Control	chr12	12025848	12026424	-121248885	+	L1MEg	LINE	L1	487	1159	-5256	7
chr12	12221658	12221659	chunk0042_435_1	10.186	AR_DHT_Control	chr12	12221505	12221683	-121053626	-	MER5B	DNA	hAT-Charlie	-7	171	1	7
chr12	12405968	12405969	chunk0042_445_1	109.1046	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	12405843	12406172	-120869137	-	MLT1N2	LTR	ERVL-MaLR	-42	520	178	7
chr12	12416148	12416149	chunk0042_447_1	25.5572	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	12415581	12416432	-120858877	-	L1PA6	LINE	L1	-2249	4133	3275	7
chr12	12489199	12489200	chunk0042_455_1	5.66005	AR_DHT_Control	chr12	12489170	12489347	-120785962	-	MamRTE1	LINE	RTE-BovB	-1270	2542	2364	7
chr12	12529834	12529835	chunk0042_457_1	4.36616	AR_DHT_Control	chr12	12529413	12530558	-120744751	-	L1MA8	LINE	L1	-4	6287	5099	7
chr12	12576427	12576428	chunk0042_461_1	19.40727	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	12576279	12576441	-120698868	+	MIRb	SINE	MIR	62	245	-23	7
chr12	12679918	12679919	chunk0042_467_1	8.86683	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	12679768	12679986	-120595323	+	MIR	SINE	MIR	31	252	-10	7
chr12	12741764	12741765	chunk0043_1_1	11.7184	AR_DHT_Control	chr12	12741718	12741900	-120533409	-	MIRb	SINE	MIR	0	268	51	7
chr12	12775031	12775032	chunk0043_2_1	42.33061	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	12774574	12775608	-120499701	+	L1MC1	LINE	L1	5476	6500	-8	7
chr12	12779770	12779771	chunk0043_5_1	39.8897	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	12779484	12779903	-120495406	+	L1ME4c	LINE	L1	284	736	-94	7
chr12	13026320	13026321	chunk0043_18_1	35.53583	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	13026059	13026487	-120248822	-	L1MEh	LINE	L1	-1753	482	4	7
chr12	13051718	13051719	chunk0043_21_1	12.4335	AR_DHT_Control	chr12	13051389	13051791	-120223518	+	L3	LINE	CR1	3311	3748	-351	7
chr12	13098151	13098152	chunk0043_22_1	50.85602	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	13098127	13098155	-120177154	+	(T)n	Simple_repeat	Simple_repeat	1	28	0	7
chr12	13106277	13106278	chunk0043_26_1	24.0708	AR_DHT_Control	chr12	13105826	13106719	-120168590	+	L1MC4	LINE	L1	5351	6337	-1545	7
chr12	13130135	13130136	chunk0043_29_1	17.86019	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	13130121	13130378	-120144931	-	L1M5	LINE	L1	-905	5241	4967	7
chr12	13362326	13362327	chunk0043_38_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	13361976	13362704	-119912605	-	LTR41C	LTR	ERVL	-3	698	1	7
chr12	13376346	13376347	chunk0043_41_1	60.12363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	13376267	13376410	-119898899	-	MIRc	SINE	MIR	-48	160	13	7
chr12	13431709	13431710	chunk0043_43_1	6.89429	AR_DHT_Control	chr12	13431388	13431813	-119843496	+	L2c	LINE	L2	2918	3385	-2	7
chr12	13443713	13443714	chunk0043_44_1	33.6389	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	13443680	13443950	-119831359	-	L1ME2z	LINE	L1	-531	7511	7207	7
chr12	13501661	13501662	chunk0043_49_1	9.63462	AR_DHT_Control	chr12	13501324	13501884	-119773425	-	MLT1F2	LTR	ERVL-MaLR	0	560	1	7
chr12	13954072	13954073	chunk0043_59_1	62.73635	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	13954022	13954163	-119321146	+	MIR3	SINE	MIR	30	203	-5	8
chr12	13963557	13963558	chunk0043_61_1	6.69935	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	13963547	13963737	-119311572	-	MIRb	SINE	MIR	-47	221	1	8
chr12	14107271	14107272	chunk0043_62_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14107026	14107914	-119167395	+	L1PB1	LINE	L1	5610	6496	-371	8
chr12	14196167	14196168	chunk0043_63_1	56.9748	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14196017	14196806	-119078503	+	L1MC1	LINE	L1	5521	6326	-7	8
chr12	14208199	14208200	chunk0043_65_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14207814	14208285	-119067024	-	LTR108a_Mam	LTR	ERVL	0	511	8	8
chr12	14255767	14255768	chunk0043_66_1	18.85407	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	14255680	14256106	-119019203	-	L2b	LINE	L2	0	3426	2980	8
chr12	14276311	14276312	chunk0043_72_1	24.547	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	14276058	14276374	-118998935	-	MLT1J-int	LTR	ERVL-MaLR	-442	945	595	8
chr12	14421067	14421068	chunk0043_76_1	31.91502	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14421000	14421333	-118853976	-	L1M5	LINE	L1	-1937	4209	3841	8
chr12	14432636	14432637	chunk0043_78_1	4.63256	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14432234	14432732	-118842577	+	Tigger20a	DNA	TcMar-Tigger	438	967	-6	8
chr12	14442462	14442463	chunk0043_79_1	18.24121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14442456	14442720	-118832589	+	Merlin1_HS	DNA	Merlin	905	1172	-3	8
chr12	14781689	14781690	chunk0043_94_1	51.75236	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14781622	14781738	-118493571	+	MamGypLTR3a	LTR	Gypsy	139	256	-725	8
chr12	14820293	14820294	chunk0043_97_1	62.3831	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	14819830	14820675	-118454634	-	L1MC	LINE	L1	-2425	3721	2800	8
chr12	14903948	14903949	chunk0043_103_1	9.1484	AR_DHT_Control	chr12	14903731	14903950	-118371359	-	MIR	SINE	MIR	-17	245	3	8
chr12	14919836	14919837	chunk0043_104_1	11.1588	AR_DHT_Control	chr12	14919835	14920043	-118355266	+	MIRc	SINE	MIR	58	265	-3	8
chr12	15158276	15158277	chunk0043_108_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	15158275	15158581	-118116728	-	AluJo	SINE	Alu	-6	306	1	8
chr12	15536498	15536499	chunk0043_117_1	7.42871	AR_DHT_Control	chr12	15536061	15536699	-117738610	-	L2a	LINE	L2	0	3426	2732	8
chr12	15651124	15651125	chunk0043_123_1	5.12066	AR_DHT_Control	chr12	15651085	15651133	-117624176	+	(AC)n	Simple_repeat	Simple_repeat	1	50	0	8
chr12	15703341	15703342	chunk0043_125_1	23.2346	AR_DHT_Control	chr12	15703206	15703667	-117571642	-	L2c	LINE	L2	-17	3370	2856	8
chr12	15729830	15729831	chunk0043_126_1	92.6936	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	15729588	15729858	-117545451	-	L1MD	LINE	L1	-3160	2986	2709	8
chr12	15820154	15820155	chunk0043_131_1	175.0597	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	15820146	15820157	-117455152	+	(CATA)n	Simple_repeat	Simple_repeat	91	127	0	8
chr12	16030847	16030848	chunk0043_137_1	6.75904	AR_DHT_Control	chr12	16030522	16030871	-117244438	+	L2a	LINE	L2	3028	3426	0	8
chr12	16034278	16034279	chunk0043_138_1	9.17597	AR_DHT_Control	chr12	16034213	16034321	-117240988	-	L2b	LINE	L2	-1	3425	3286	8
chr12	16341551	16341552	chunk0043_149_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	16341284	16341613	-116933696	-	L1M2	LINE	L1	-2202	3941	3610	8
chr12	16436293	16436294	chunk0043_153_1	255.3105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	16436211	16436329	-116838980	-	L2a	LINE	L2	-8	3418	3294	8
chr12	16738247	16738248	chunk0043_160_1	6.48643	AR_DHT_Control	chr12	16738242	16738281	-116537028	+	(TC)n	Simple_repeat	Simple_repeat	1	39	0	8
chr12	16900711	16900712	chunk0043_162_1	82.9067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	16900618	16900852	-116374457	+	MER58A	DNA	hAT-Charlie	1	224	0	8
chr12	16934996	16934997	chunk0043_163_1	14.6406	AR_DHT_Control	chr12	16934808	16935959	-116339350	-	L1PA15-16	LINE	L1	-1115	5800	4660	8
chr12	16940077	16940078	chunk0043_165_1	46.54428	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	16940025	16940279	-116335030	-	L1PA15-16	LINE	L1	-5325	1594	1343	8
chr12	17194364	17194365	chunk0043_174_1	208.00604	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	17194337	17195702	-116079607	+	MLT1A1-int	LTR	ERVL-MaLR	407	1734	-1	8
chr12	17322533	17322534	chunk0043_177_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	17317968	17323002	-115952307	-	L1PB1	LINE	L1	-968	5894	634	8
chr12	17600973	17600974	chunk0043_179_1	26.77	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	17600316	17602252	-115673057	-	L1M4b	LINE	L1	-4880	1987	11	8
chr12	17949900	17949901	chunk0043_182_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	17949165	17952069	-115323240	+	L1MA9	LINE	L1	1	3007	-4161	8
chr12	18712663	18712664	chunk0043_185_1	18.87829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	18712534	18712672	-114562637	-	MER112	DNA	hAT-Charlie	0	261	111	8
chr12	18878387	18878388	chunk0043_187_1	23.8772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	18878289	18878428	-114396881	+	L2c	LINE	L2	3247	3387	0	8
chr12	18879507	18879508	chunk0043_188_1	45.4032	AR_DHT_Control	chr12	18879110	18879591	-114395718	-	MLT1B	LTR	ERVL-MaLR	-4	386	1	8
chr12	18953754	18953755	chunk0043_189_1	56.3938	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	18953738	18953881	-114321428	+	L3	LINE	CR1	2613	2757	-1342	8
chr12	18998428	18998429	chunk0043_190_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	18998116	18998450	-114276859	-	L1MEf	LINE	L1	-6014	386	35	8
chr12	19223101	19223102	chunk0043_197_1	35.26466	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	19223057	19223312	-114051997	-	Kanga1b	DNA	TcMar-Tc2	-425	354	53	8
chr12	19403196	19403197	chunk0043_203_1	6.48643	AR_DHT_Control	chr12	19401832	19403682	-113871627	-	L1PBb	LINE	L1	-5220	1643	660	8
chr12	19564398	19564399	chunk0043_210_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	19563303	19565281	-113710028	-	L1PREC2	LINE	L1	0	8155	6162	8
chr12	19610147	19610148	chunk0043_213_1	4.66817	AR_DHT_Control	chr12	19609927	19612106	-113663203	-	L1PA15	LINE	L1	0	6165	3966	8
chr12	19700902	19700903	chunk0043_215_1	3.92063	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	19700213	19706896	-113568413	+	L1PA15	LINE	L1	13	6757	-28	8
chr12	19701413	19701414	chunk0043_216_1	7.87682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	19700213	19706896	-113568413	+	L1PA15	LINE	L1	13	6757	-28	8
chr12	19719782	19719783	chunk0043_217_1	4.83532	AR_DHT_Control	chr12	19719714	19719884	-113555425	+	MER117	DNA	hAT-Charlie	1	179	-18	8
chr12	19792586	19792587	chunk0043_218_1	9.02306	AR_DHT_Control	chr12	19792430	19793414	-113481895	+	L1ME3D	LINE	L1	4381	5422	-821	8
chr12	19795879	19795880	chunk0043_219_1	19.5995	AR_DHT_Control	chr12	19795848	19795939	-113479370	-	L2a	LINE	L2	-61	3365	3280	8
chr12	19913179	19913180	chunk0043_221_1	66.57788	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	19913119	19913462	-113361847	+	L2b	LINE	L2	2934	3318	-108	8
chr12	19917184	19917185	chunk0043_225_1	28.09308	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	19916969	19917351	-113357958	-	MER57C1	LTR	ERV1	0	385	1	8
chr12	20176124	20176125	chunk0043_238_1	170.181	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	20175940	20176382	-113098927	-	L1M7	LINE	L1	-4250	1968	1482	8
chr12	20199885	20199886	chunk0043_240_1	5.03921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	20199466	20200558	-113074751	-	L1PB3	LINE	L1	-3868	3047	1844	8
chr12	20275014	20275015	chunk0043_243_1	51.29428	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	20274901	20275342	-112999967	-	L1MB8	LINE	L1	-31	6147	5678	8
chr12	20276978	20276979	chunk0043_244_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	20276704	20277401	-112997908	-	L1M4b	LINE	L1	-6107	760	21	8
chr12	20305268	20305269	chunk0043_245_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	20304248	20308522	-112966787	+	L1M2a	LINE	L1	401	4607	-2952	8
chr12	20364817	20364818	chunk0043_247_1	8.79298	AR_DHT_Control	chr12	20364713	20365128	-112910181	-	L2a	LINE	L2	-27	3399	2978	8
chr12	20547425	20547426	chunk0043_252_1	43.35	AR_DHT_Control	chr12	20547027	20547455	-112727854	+	L2a	LINE	L2	2996	3426	0	8
chr12	20717259	20717260	chunk0043_262_1	28.2804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	20717239	20717265	-112558044	+	(TTTA)n	Simple_repeat	Simple_repeat	1	27	0	8
chr12	20735357	20735358	chunk0043_265_1	5.89947	AR_DHT_Control	chr12	20735306	20735469	-112539840	+	MIR3	SINE	MIR	38	198	-10	8
chr12	20746881	20746882	chunk0043_267_1	22.70222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	20745853	20747142	-112528167	+	L1MC5	LINE	L1	7869	9156	-148	8
chr12	20830549	20830550	chunk0043_268_1	68.1639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	20830247	20830681	-112444628	-	MER4C	LTR	ERV1	0	465	1	8
chr12	20848221	20848222	chunk0043_269_1	24.8484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	20848085	20849161	-112426148	+	L1MC2	LINE	L1	5236	6344	0	8
chr12	20903237	20903238	chunk0043_271_1	110.6428	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	20903096	20903383	-112371926	+	L1MC2	LINE	L1	5488	5804	-540	8
chr12	20954008	20954009	chunk0043_273_1	50.5357	AR_DHT_Control	chr12	20951885	20957242	-112318067	+	L1PA7	LINE	L1	1042	6463	-6	8
chr12	20967891	20967892	chunk0043_274_1	58.8099	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	20967692	20968283	-112307026	-	LTR57-int	LTR	ERVL	-3768	1575	984	8
chr12	20968656	20968657	chunk0043_276_1	30.27458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	20968283	20969097	-112306212	-	MER4-int	LTR	ERV1	-169	2316	1357	8
chr12	21001116	21001117	chunk0043_277_1	46.43137	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	21000941	21003491	-112271818	-	L1PBb	LINE	L1	-5223	1693	56	8
chr12	21061638	21061639	chunk0043_279_1	12.9925	AR_DHT_Control	chr12	21058644	21063106	-112212203	-	L1PB4	LINE	L1	-475	6450	1965	8
chr12	21116591	21116592	chunk0043_280_1	4.40478	AR_DHT_Control	chr12	21116057	21118672	-112156637	-	L1M1	LINE	L1	-3894	3752	1104	8
chr12	21689331	21689332	chunk0043_292_1	25.43465	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	21689168	21690984	-111584325	+	L1PA15	LINE	L1	2006	3800	-2966	8
chr12	21984768	21984769	chunk0043_298_1	12.73	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	21984503	21985710	-111289599	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	8
chr12	22044089	22044090	chunk0043_299_1	48.2468	AR_DHT_Control	chr12	22044062	22044164	-111231145	-	L2c	LINE	L2	-13	3374	3278	8
chr12	22050299	22050300	chunk0043_300_1	14.9872	AR_DHT_Control	chr12	22050196	22050406	-111224903	+	MIR	SINE	MIR	19	235	-27	8
chr12	22123645	22123646	chunk0043_302_1	20.8552	AR_DHT_Control	chr12	22123625	22123710	-111151599	+	L3	LINE	CR1	4013	4097	-2	8
chr12	22149408	22149409	chunk0043_304_1	139.7301	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	22147464	22152713	-111122596	+	L1PA7	LINE	L1	1257	6468	-1	8
chr12	22161254	22161255	chunk0043_305_1	23.1889	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	22161010	22161418	-111113891	-	Charlie8	DNA	hAT-Charlie	-2008	420	1	8
chr12	22169221	22169222	chunk0043_307_1	37.1268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	22168564	22169382	-111105927	+	L1ME1	LINE	L1	5022	5895	-284	8
chr12	22172995	22172996	chunk0043_310_1	14.8221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	22172821	22173067	-111102242	-	MER30	DNA	hAT-Charlie	0	230	2	8
chr12	22209644	22209645	chunk0043_312_1	12.13626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	22209631	22209717	-111065592	+	L2a	LINE	L2	3079	3165	-261	8
chr12	22319092	22319093	chunk0043_318_1	66.6538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	22319036	22319236	-110956073	+	MIRb	SINE	MIR	61	268	0	8
chr12	22476716	22476717	chunk0043_324_1	6.48643	AR_DHT_Control	chr12	22476597	22476772	-110798537	-	L2c	LINE	L2	-70	3317	3133	8
chr12	22640731	22640732	chunk0043_329_1	6.6833	AR_DHT_Control	chr12	22640604	22640839	-110634470	-	MIR	SINE	MIR	-11	251	2	8
chr12	22727365	22727366	chunk0043_332_1	7.97574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	22726874	22728118	-110547191	+	L1ME1	LINE	L1	4771	6048	-131	8
chr12	22748105	22748106	chunk0043_334_1	28.11952	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	22747013	22748578	-110526731	-	LTR37-int	LTR	ERV1	-2233	1827	228	8
chr12	22756391	22756392	chunk0043_335_1	7.63168	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	22756273	22756401	-110518908	+	L1MC	LINE	L1	2316	2440	-3706	8
chr12	22760404	22760405	chunk0043_336_1	43.3033	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	22760300	22760407	-110514902	-	L3	LINE	CR1	-2036	2063	1959	8
chr12	22763806	22763807	chunk0043_339_1	22.4107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	22763707	22763942	-110511367	+	L2c	LINE	L2	3109	3380	-7	8
chr12	22917695	22917696	chunk0043_343_1	40.98797	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	22917688	22917796	-110357513	+	MamSINE1	SINE	tRNA-RTE	182	290	0	8
chr12	23005573	23005574	chunk0043_346_1	8.68049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	23005464	23006108	-110269201	+	L1ME1	LINE	L1	5552	6167	-12	8
chr12	23375707	23375708	chunk0043_359_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	23375154	23378011	-109897298	+	L1PA17	LINE	L1	345	3015	-3904	8
chr12	23381019	23381020	chunk0043_361_1	27.8822	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	23379898	23381919	-109893390	+	L1PA17	LINE	L1	4846	6933	-2	8
chr12	23389349	23389350	chunk0043_362_1	47.0004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	23388702	23390505	-109884804	+	L1PA5	LINE	L1	5	1856	-4328	8
chr12	23415356	23415357	chunk0043_363_1	5.6425	AR_DHT_Control	chr12	23415309	23415499	-109859810	+	LTR88a	LTR	Gypsy?	244	461	-355	8
chr12	24308204	24308205	chunk0043_374_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	24307858	24308569	-108966740	+	MER50	LTR	ERV1	1	722	-12	8
chr12	24551569	24551570	chunk0043_377_1	5.69226	AR_DHT_Control	chr12	24551532	24551627	-108723682	-	L2a	LINE	L2	-2	3424	3318	8
chr12	24665840	24665841	chunk0043_379_1	29.2341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	24665777	24665882	-108609427	+	L2b	LINE	L2	3240	3363	-12	8
chr12	24969407	24969408	chunk0043_382_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	24968689	24969575	-108305734	-	LTR37-int	LTR	ERV1	-2947	1113	231	8
chr12	25057838	25057839	chunk0043_383_1	12.1886	AR_DHT_Control	chr12	25057654	25058503	-108216806	-	L1ME2	LINE	L1	-17	6147	5198	8
chr12	25115857	25115858	chunk0043_386_1	12.1095	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	25115471	25115865	-108159444	+	L1M4	LINE	L1	5278	5700	-484	8
chr12	25239090	25239091	chunk0043_387_1	59.9475	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	25238658	25239260	-108036049	-	L1ME4b	LINE	L1	-232	660	26	8
chr12	25287079	25287080	chunk0043_390_1	57.15547	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	25286400	25287839	-107987470	+	L2c	LINE	L2	1560	3154	-233	8
chr12	25336843	25336844	chunk0043_392_1	41.1502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	25336825	25336907	-107938402	-	L2a	LINE	L2	-3	3423	3323	8
chr12	25437613	25437614	chunk0043_399_1	5.37069	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	25437597	25439433	-107835876	-	ERV3-16A3_I-int	LTR	ERVL	-1127	4540	2731	8
chr12	25636085	25636086	chunk0043_401_1	15.27461	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	25635269	25637147	-107638162	+	L1PB1	LINE	L1	5005	6867	0	8
chr12	25707726	25707727	chunk0043_407_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	25706554	25708082	-107567227	+	MSTB-int	LTR	ERVL-MaLR	3	1565	-86	8
chr12	25731573	25731574	chunk0043_409_1	18.45466	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	25731543	25732729	-107542580	-	L1M4b	LINE	L1	-2732	4274	3070	8
chr12	25853006	25853007	chunk0043_415_1	97.50642	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	25852914	25853029	-107422280	-	L2b	LINE	L2	-8	3367	3257	8
chr12	25861324	25861325	chunk0043_420_1	7.17788	AR_DHT_Control	chr12	25860773	25861342	-107413967	+	L2a	LINE	L2	2793	3426	0	8
chr12	25866991	25866992	chunk0043_421_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	25866378	25867827	-107407482	+	L1MB8	LINE	L1	74	1578	-5055	8
chr12	25968754	25968755	chunk0043_427_1	55.28463	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	25968700	25969214	-107306095	-	L2a	LINE	L2	-62	3364	2818	8
chr12	26038635	26038636	chunk0043_430_1	6.94032	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	26038608	26038656	-107236653	+	(AC)n	Simple_repeat	Simple_repeat	1	48	0	8
chr12	26174926	26174927	chunk0043_436_1	95.3683	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	26174820	26174981	-107100328	-	L1ME1	LINE	L1	-180	5999	5846	8
chr12	26654747	26654748	chunk0043_447_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	26654630	26655046	-106620263	+	MLT1F1	LTR	ERVL-MaLR	126	569	0	8
chr12	26723788	26723789	chunk0043_455_1	55.53771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	26723394	26724154	-106551155	+	L4_A_Mam	LINE	RTE-X	4223	4989	-1	8
chr12	26764043	26764044	chunk0043_460_1	9.23066	AR_DHT_Control	chr12	26763935	26764552	-106510757	+	L1MC	LINE	L1	4723	5327	-819	8
chr12	26796114	26796115	chunk0044_1_1	220.2931	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	26796028	26796145	-106479164	+	MER91A	DNA	hAT-Tip100	72	195	-1	8
chr12	26805661	26805662	chunk0044_2_1	25.24915	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	26805535	26806073	-106469236	-	L2a	LINE	L2	0	3426	2697	8
chr12	26913101	26913102	chunk0044_7_1	13.2288	AR_DHT_Control	chr12	26913030	26913149	-106362160	+	L2c	LINE	L2	3254	3387	0	8
chr12	26987837	26987838	chunk0044_8_1	28.20782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	26987472	26988180	-106287129	+	L1MC4	LINE	L1	6966	7679	-363	8
chr12	27087713	27087714	chunk0044_15_1	23.9868	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27087668	27088138	-106187171	+	L1MC4a	LINE	L1	7385	7880	-2	8
chr12	27132082	27132083	chunk0044_17_1	21.42192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27132015	27132194	-106143115	-	AluJb	SINE	Alu	-12	300	123	8
chr12	27161830	27161831	chunk0044_19_1	5.6425	AR_DHT_Control	chr12	27161817	27161925	-106113384	-	L2c	LINE	L2	0	3387	3267	8
chr12	27182271	27182272	chunk0044_23_1	18.40215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27182208	27182544	-106092765	+	MER21C	LTR	ERVL	49	412	-526	8
chr12	27224290	27224291	chunk0044_24_1	7.87199	AR_DHT_Control	chr12	27224082	27224863	-106050446	+	L1MC1	LINE	L1	5546	6327	-6	8
chr12	27239404	27239405	chunk0044_25_1	19.26194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27239315	27239506	-106035803	-	L1M5	LINE	L1	-2763	3383	3182	8
chr12	27279990	27279991	chunk0044_27_1	57.032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27279927	27280106	-105995203	+	MIR	SINE	MIR	70	262	0	8
chr12	27286390	27286391	chunk0044_28_1	8.79298	AR_DHT_Control	chr12	27286297	27286396	-105988913	-	L1ME4a	LINE	L1	-1	6123	6022	8
chr12	27366743	27366744	chunk0044_33_1	7.5995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27366634	27366917	-105908392	+	L1ME4c	LINE	L1	313	620	-210	8
chr12	27451587	27451588	chunk0044_37_1	4.96282	AR_DHT_Control	chr12	27451424	27451651	-105823658	-	Tigger17a	DNA	TcMar-Tigger	-115	539	290	8
chr12	27478359	27478360	chunk0044_38_1	6.94032	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	27477235	27479454	-105795855	-	L1M2	LINE	L1	-4387	3179	1411	8
chr12	27644109	27644110	chunk0044_44_1	31.48089	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27644075	27644244	-105631065	-	AluJo	SINE	Alu	-11	301	128	8
chr12	27704220	27704221	chunk0044_54_1	11.0699	AR_DHT_Control	chr12	27704019	27704605	-105570704	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	8
chr12	27727719	27727720	chunk0044_57_1	16.02215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	27727620	27727780	-105547529	-	L1MB7	LINE	L1	-1013	5133	4978	8
chr12	27748000	27748001	chunk0044_58_1	14.92251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27747898	27748078	-105527231	+	MIR	SINE	MIR	64	242	-20	8
chr12	27751869	27751870	chunk0044_60_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	27751335	27751922	-105523387	-	LTR18B	LTR	ERVL	0	614	4	8
chr12	27865371	27865372	chunk0044_63_1	96.59892	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	27865359	27865506	-105409803	+	MER58A	DNA	hAT-Charlie	76	224	0	8
chr12	27880120	27880121	chunk0044_65_1	11.1716	AR_DHT_Control	chr12	27878803	27881499	-105393810	-	L1MA8	LINE	L1	-12	7698	4964	8
chr12	27944255	27944256	chunk0044_70_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	27944116	27944338	-105330971	+	MIRb	SINE	MIR	6	238	-30	8
chr12	28072636	28072637	chunk0044_76_1	25.2231	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	28070688	28073659	-105201650	+	L1MA8	LINE	L1	4632	7708	-2	8
chr12	28098585	28098586	chunk0044_77_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	28098480	28098735	-105176574	+	MIRb	SINE	MIR	20	258	-10	8
chr12	28118089	28118090	chunk0044_79_1	45.62856	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	28118057	28118134	-105157175	-	MER91C	DNA	hAT-Tip100	-34	106	23	8
chr12	28202552	28202553	chunk0044_80_1	6.48643	AR_DHT_Control	chr12	28202042	28203376	-105071933	-	L1M4	LINE	L1	-6136	1381	3	8
chr12	28242304	28242305	chunk0044_85_1	7.37742	AR_DHT_Control	chr12	28242098	28242687	-105032622	-	MER54A	LTR	ERVL	0	901	329	8
chr12	28339743	28339744	chunk0044_94_1	14.3497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	28339557	28339752	-104935557	+	MER2	DNA	TcMar-Tigger	135	344	-1	8
chr12	28454413	28454414	chunk0044_97_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	28454124	28455005	-104820304	-	L1M3d	LINE	L1	-4978	913	4	8
chr12	28464406	28464407	chunk0044_98_1	9.25776	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	28463805	28467055	-104808254	+	L1MA2	LINE	L1	17	3352	-4213	8
chr12	28519453	28519454	chunk0044_101_1	10.1791	AR_DHT_Control	chr12	28519321	28519561	-104755748	-	L1PB1	LINE	L1	-1748	5114	4864	8
chr12	28536508	28536509	chunk0044_102_1	9.70003	AR_DHT_Control	chr12	28536471	28536703	-104738606	+	MIR	SINE	MIR	3	237	-25	8
chr12	28603864	28603865	chunk0044_104_1	40.53464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	28603760	28603895	-104671414	-	L2c	LINE	L2	-12	3375	3252	8
chr12	28807771	28807772	chunk0044_107_1	15.76565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	28807717	28807836	-104467473	-	MIRb	SINE	MIR	-5	263	134	8
chr12	29025903	29025904	chunk0044_112_1	46.9962	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	29025867	29026293	-104249016	-	L2a	LINE	L2	-1	3425	2985	8
chr12	29053805	29053806	chunk0044_115_1	87.242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	29053746	29054171	-104221138	+	L1ME2	LINE	L1	5654	6157	-7	8
chr12	29101637	29101638	chunk0044_117_1	59.5377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	29101109	29102265	-104173044	-	L1MC2	LINE	L1	-151	6193	5010	8
chr12	29127151	29127152	chunk0044_120_1	8.62865	AR_DHT_Control	chr12	29125096	29127317	-104147992	-	L1MC1	LINE	L1	-1203	5118	2860	8
chr12	29226020	29226021	chunk0044_124_1	13.41268	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	29225958	29226175	-104049134	+	MIR	SINE	MIR	29	262	0	8
chr12	29304365	29304366	chunk0044_128_1	45.14808	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	29304295	29304457	-103970852	-	L2b	LINE	L2	-28	3347	3208	8
chr12	29425725	29425726	chunk0044_137_1	37.2083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	29425516	29425786	-103849523	+	MIR	SINE	MIR	6	262	0	8
chr12	29498802	29498803	chunk0044_138_1	7.12934	AR_DHT_Control	chr12	29498791	29498870	-103776439	-	MER3	DNA	hAT-Charlie	-129	80	1	8
chr12	29552391	29552392	chunk0044_139_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	29552156	29552495	-103722814	+	MER33	DNA	hAT-Charlie	1	324	0	8
chr12	29563778	29563779	chunk0044_142_1	105.271	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	29563732	29564167	-103711142	-	L2a	LINE	L2	-9	3417	2941	8
chr12	29743231	29743232	chunk0044_153_1	10.7608	AR_DHT_Control	chr12	29743037	29743286	-103532023	-	MIR	SINE	MIR	-7	255	2	8
chr12	29840720	29840721	chunk0044_157_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	29837185	29841634	-103433675	-	L1MA3	LINE	L1	-2941	4624	72	8
chr12	29843739	29843740	chunk0044_158_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	29843683	29844040	-103431269	+	L1ME4a	LINE	L1	5504	5903	-221	8
chr12	29858747	29858748	chunk0044_159_1	74.95517	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	29858647	29859069	-103416240	+	L2c	LINE	L2	2943	3382	-5	8
chr12	29859547	29859548	chunk0044_161_1	8.0443	AR_DHT_Control	chr12	29859494	29859644	-103415665	+	L2c	LINE	L2	3242	3382	-5	8
chr12	30027786	30027787	chunk0044_171_1	9.63462	AR_DHT_Control	chr12	30027738	30027858	-103247451	-	LTR82B	LTR	ERVL	-705	125	1	8
chr12	30088473	30088474	chunk0044_175_1	17.43983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	30088171	30090409	-103184900	-	L1ME2	LINE	L1	-116	6048	3739	8
chr12	30313624	30313625	chunk0044_182_1	10.2986	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	30309930	30314563	-102960746	+	L1PA10	LINE	L1	1	5997	-1584	8
chr12	30361355	30361356	chunk0044_186_1	24.50611	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	30361016	30361497	-102913812	-	MER4CL34	LTR	ERV1	0	872	301	8
chr12	30437290	30437291	chunk0044_188_1	156.8622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr12	30437252	30437590	-102837719	+	LTR82B	LTR	ERVL	3	394	-436	8
chr12	30531933	30531934	chunk0044_192_1	4.06817	AR_DHT_Control	chr12	30531903	30531939	-102743370	+	(TGAGAG)n	Simple_repeat	Simple_repeat	1	40	0	8
chr12	30542495	30542496	chunk0044_193_1	19.12822	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	30540568	30542830	-102732479	-	L1PB2	LINE	L1	-779	6083	3811	8
chr12	30548512	30548513	chunk0044_195_1	72.318	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	30548288	30548524	-102726785	+	MIRc	SINE	MIR	49	268	0	8
chr12	30791433	30791434	chunk0044_200_1	45.1595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	30790822	30791655	-102483654	-	LTR39	LTR	ERV1	0	783	1	8
chr12	30807585	30807586	chunk0044_203_1	7.97574	AR_DHT_Control	chr12	30806990	30807917	-102467392	+	L1M3f	LINE	L1	1247	2187	-4378	8
chr12	30820757	30820758	chunk0044_205_1	21.92599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	30820730	30821285	-102454024	+	MER61F	LTR	ERV1	96	676	0	8
chr12	30851737	30851738	chunk0044_207_1	21.2512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	30850964	30851917	-102423392	+	LTR13_	LTR	ERVK	1	954	0	8
chr12	30862566	30862567	chunk0044_208_1	7.22694	AR_DHT_Control	chr12	30862552	30862593	-102412716	+	L2b	LINE	L2	3335	3374	-1	8
chr12	30885549	30885550	chunk0044_209_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	30885314	30887511	-102387798	+	L1M2a	LINE	L1	634	2842	-4326	8
chr12	31022267	31022268	chunk0044_213_1	17.94958	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	31021931	31022440	-102252869	-	LTR40a	LTR	ERVL	0	519	4	8
chr12	31357839	31357840	chunk0044_221_1	18.03424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	31357770	31357884	-101917425	-	L1ME4a	LINE	L1	-265	5859	5741	8
chr12	31391084	31391085	chunk0044_226_1	7.33732	AR_DHT_Control	chr12	31391032	31391620	-101883689	+	L2a	LINE	L2	2815	3425	-1	8
chr12	31472024	31472025	chunk0044_231_1	6.48643	AR_DHT_Control	chr12	31471612	31472303	-101803006	+	MER21-int	LTR	ERVL	505	1228	-2963	8
chr12	31491622	31491623	chunk0044_232_1	148.1763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	31491580	31491697	-101783612	+	L1ME3Cz	LINE	L1	873	988	-9	8
chr12	31518333	31518334	chunk0044_234_1	24.5771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	31518254	31518419	-101756890	-	MIR3	SINE	MIR	-11	197	31	8
chr12	31588099	31588100	chunk0044_235_1	6.62784	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	31587846	31588394	-101686915	+	L2a	LINE	L2	2706	3264	-162	8
chr12	31651079	31651080	chunk0044_237_1	7.97574	AR_DHT_Control	chr12	31650831	31651245	-101624064	-	LTR47A	LTR	ERVL	0	452	1	8
chr12	31682291	31682292	chunk0044_238_1	21.02417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	31682253	31682804	-101592505	-	LTR55	LTR	ERVL?	-2	546	8	8
chr12	31721679	31721680	chunk0044_241_1	57.0325	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	31721652	31722130	-101553179	+	HERVL40-int	LTR	ERVL	3181	3672	-1858	8
chr12	31749448	31749449	chunk0044_244_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	31749068	31749596	-101525713	-	LTR8B	LTR	ERV1	0	820	259	8
chr12	32050308	32050309	chunk0044_253_1	10.9481	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	32050034	32050660	-101224649	+	Tigger3b	DNA	TcMar-Tigger	1	658	-573	8
chr12	32093519	32093520	chunk0044_254_1	61.82038	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	32093203	32093616	-101181693	-	L4_A_Mam	LINE	RTE-X	-16	4974	4564	8
chr12	32176694	32176695	chunk0044_258_1	125.7032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	32176414	32176969	-101098340	-	L1ME2	LINE	L1	-7	6157	5602	8
chr12	32187223	32187224	chunk0044_262_1	60.1098	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	32187132	32187239	-101088070	+	MER110A	LTR	ERV1	80	167	-324	8
chr12	32693020	32693021	chunk0044_285_1	53.9032	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	32692868	32693504	-100581805	-	L1ME3C	LINE	L1	-266	5857	5086	8
chr12	32756050	32756051	chunk0044_291_1	6.35715	AR_DHT_Control	chr12	32756018	32756184	-100519125	+	MIR	SINE	MIR	58	229	-39	8
chr12	32865769	32865770	chunk0044_297_1	28.7348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	32865698	32866270	-100409039	+	L1ME1	LINE	L1	4969	5569	-750	8
chr12	33558943	33558944	chunk0044_311_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	33558510	33559007	-99716302	-	L4_B_Mam	LINE	RTE-X	-628	4313	3783	8
chr12	33780753	33780754	chunk0044_318_1	33.28634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	33779900	33780880	-99494429	-	L1MC1	LINE	L1	-9	6324	5339	8
chr12	34048633	34048634	chunk0044_320_1	11.5684	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	34048041	34048661	-99226648	+	LTR14B	LTR	ERVK	17	608	0	8
chr12	34122355	34122356	chunk0044_321_1	25.5243	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	34118238	34123355	-99151954	-	HERV15-int	LTR	ERV1	0	8735	3608	8
chr12	34199100	34199101	chunk0044_322_1	14.2911	AR_DHT_Control	chr12	34198889	34199470	-99075839	+	LTR66	LTR	ERVL	3	610	0	8
chr12	34253890	34253891	chunk0044_326_1	35.7156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	34253830	34253984	-99021325	-	L1MB2	LINE	L1	-3	7128	6973	8
chr12	34277371	34277372	chunk0044_327_1	21.61394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	34277356	34277391	-98997918	+	(T)n	Simple_repeat	Simple_repeat	1	35	0	8
chr12	38175622	38175623	chunk0044_330_1	9.99437	AR_DHT_Control	chr12	38175583	38175635	-95099674	+	(ACACAC)n	Simple_repeat	Simple_repeat	1	52	0	8
chr12	38261365	38261366	chunk0044_333_1	4.83532	AR_DHT_Control	chr12	38260809	38261539	-95013770	+	L1M2b	LINE	L1	1	962	-6247	8
chr12	38555743	38555744	chunk0044_338_1	164.10498	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	38555656	38555876	-94719433	-	ERVL-B4-int	LTR	ERVL	-1808	3906	3665	8
chr12	38571190	38571191	chunk0044_341_1	14.84122	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	38570999	38574936	-94700373	+	L1MA1	LINE	L1	16	4029	-3536	8
chr12	38579508	38579509	chunk0044_343_1	6.48643	AR_DHT_Control	chr12	38576468	38579980	-94695329	+	L1MA1	LINE	L1	4125	7721	0	8
chr12	38886283	38886284	chunk0044_349_1	27.7212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	38886208	38886387	-94388922	+	MIR	SINE	MIR	38	236	-26	8
chr12	38917494	38917495	chunk0044_354_1	18.81868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	38917439	38917648	-94357661	+	L1ME4b	LINE	L1	352	570	-322	8
chr12	39284830	39284831	chunk0044_363_1	5.6425	AR_DHT_Control	chr12	39284721	39284897	-93990412	+	MER5A	DNA	hAT-Charlie	1	189	0	8
chr12	39319361	39319362	chunk0044_365_1	31.92505	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	39319129	39319646	-93955663	+	Charlie7	DNA	hAT-Charlie	86	672	-1940	8
chr12	39606855	39606856	chunk0044_371_1	12.1906	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	39606855	39606997	-93668312	-	L2c	LINE	L2	-10	3416	3262	8
chr12	39806888	39806889	chunk0044_373_1	7.36432	AR_DHT_Control	chr12	39806796	39807040	-93468269	+	L1MD2	LINE	L1	5712	5966	-389	8
chr12	39919186	39919187	chunk0044_386_1	5.53391	AR_DHT_Control	chr12	39918982	39919228	-93356081	-	AluJr	SINE	Alu	-20	292	1	8
chr12	40635102	40635103	chunk0044_395_1	53.1221	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	40635068	40635290	-92640019	+	LTR67B	LTR	ERVL	394	617	-3	8
chr12	40683063	40683064	chunk0044_398_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	40683043	40683433	-92591876	-	L2a	LINE	L2	-11	3415	2982	8
chr12	40895514	40895515	chunk0044_399_1	92.7658	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	40895320	40895715	-92379594	-	MSTC	LTR	ERVL-MaLR	-4	424	1	8
chr12	41026382	41026383	chunk0044_403_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	41026196	41027646	-92247663	-	L2a	LINE	L2	0	3426	1925	8
chr12	41956513	41956514	chunk0044_421_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	41956067	41957073	-91318236	+	L1MC4	LINE	L1	6354	7447	-595	8
chr12	42034163	42034164	chunk0044_427_1	6.6833	AR_DHT_Control	chr12	42034011	42034260	-91241049	-	MIR	SINE	MIR	0	262	13	8
chr12	42325009	42325010	chunk0044_442_1	13.1652	AR_DHT_Control	chr12	42324924	42325227	-90950082	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	8
chr12	42362944	42362945	chunk0044_444_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	42362780	42363219	-90912090	+	LTR40c	LTR	ERVL	5	465	0	8
chr12	42594055	42594056	chunk0044_450_1	34.4596	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	42594038	42594312	-90680997	+	L2b	LINE	L2	2869	3149	-226	8
chr12	42976756	42976757	chunk0045_10_1	17.2801	AR_DHT_Control	chr12	42976670	42976788	-90298521	-	MamSINE1	SINE	tRNA-RTE	-81	209	94	8
chr12	42976756	42976757	chunk0045_10_1	17.2801	AR_DHT_Control	chr12	42976705	42976801	-90298508	-	MamRTE1	LINE	RTE-BovB	-3609	203	103	8
chr12	43099768	43099769	chunk0045_15_1	17.29169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	43099661	43099918	-90175391	+	L2c	LINE	L2	3052	3367	-20	8
chr12	43200265	43200266	chunk0045_16_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	43200121	43200335	-90074974	+	MIR	SINE	MIR	13	252	-10	8
chr12	43447577	43447578	chunk0045_18_1	9.00866	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	43446747	43449651	-89825658	+	L1PREC2	LINE	L1	3245	6160	0	8
chr12	43760634	43760635	chunk0045_20_1	10.8162	AR_DHT_Control	chr12	43760107	43760983	-89514326	+	L2a	LINE	L2	2446	3423	-3	8
chr12	43770493	43770494	chunk0045_22_1	30.5157	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	43770364	43770532	-89504777	+	MIRb	SINE	MIR	17	182	-48	8
chr12	43858203	43858204	chunk0045_29_1	64.41555	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	43858171	43858288	-89417021	-	MIR3	SINE	MIR	-91	139	24	8
chr12	44174614	44174615	chunk0045_33_1	21.1909	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	44174607	44175059	-89100250	-	L2b	LINE	L2	-1	3374	2936	8
chr12	44485156	44485157	chunk0045_37_1	59.1015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	44485067	44485162	-88790147	+	L2a	LINE	L2	3299	3426	0	8
chr12	44962219	44962220	chunk0045_45_1	64.4779	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	44961280	44962232	-88313077	+	L1PA15	LINE	L1	1800	2766	-4084	8
chr12	45132198	45132199	chunk0045_47_1	58.12904	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	45132064	45132252	-88143057	+	L1MC5a	LINE	L1	2559	2761	-16	8
chr12	45352954	45352955	chunk0045_61_1	18.4549	AR_DHT_Control	chr12	45352743	45353315	-87921994	-	L1MC5	LINE	L1	-291	9013	8433	8
chr12	45479725	45479726	chunk0045_65_1	27.26705	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	45479592	45480252	-87795057	+	HAL1ME	LINE	L1	877	1512	-953	8
chr12	45617228	45617229	chunk0045_66_1	6.54035	AR_DHT_Control	chr12	45617215	45617357	-87657952	+	Tigger15a	DNA	TcMar-Tigger	36	186	-529	8
chr12	45622614	45622615	chunk0045_68_1	57.96034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	45622540	45622680	-87652629	-	L2a	LINE	L2	-12	3414	3266	8
chr12	45623904	45623905	chunk0045_69_1	5.77611	AR_DHT_Control	chr12	45623627	45623921	-87651388	-	AluJr	SINE	Alu	-21	291	11	8
chr12	45632909	45632910	chunk0045_70_1	55.0118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	45632462	45632915	-87642394	-	L2a	LINE	L2	-20	3406	2942	8
chr12	45695183	45695184	chunk0045_73_1	4.93365	AR_DHT_Control	chr12	45695016	45695438	-87579871	+	MER57B2	LTR	ERV1	1	403	0	8
chr12	45743608	45743609	chunk0045_76_1	89.2569	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	45743557	45744239	-87531070	-	L1MC	LINE	L1	-1419	4727	4014	8
chr12	45771892	45771893	chunk0045_78_1	7.97539	AR_DHT_Control	chr12	45771676	45772309	-87503000	+	L1M4b	LINE	L1	2463	3154	-3713	8
chr12	45803991	45803992	chunk0045_80_1	7.29426	AR_DHT_Control	chr12	45802367	45804052	-87471257	-	Charlie7	DNA	hAT-Charlie	-707	1905	136	8
chr12	45828564	45828565	chunk0045_81_1	9.63462	AR_DHT_Control	chr12	45828021	45829247	-87446062	-	L1ME3A	LINE	L1	-22	6611	5181	8
chr12	45966181	45966182	chunk0045_88_1	25.4651	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	45966128	45966282	-87309027	+	Plat_L3	LINE	CR1	3132	3289	-297	8
chr12	46021056	46021057	chunk0045_93_1	51.2543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	46019318	46022325	-87252984	-	L1PB2	LINE	L1	-1926	5639	2579	8
chr12	46024657	46024658	chunk0045_95_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	46023180	46025427	-87249882	-	L1PB2	LINE	L1	-5219	2347	706	8
chr12	46089812	46089813	chunk0045_98_1	97.33515	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	46089316	46089817	-87185492	+	LTR38	LTR	ERV1	39	545	-11	8
chr12	46110184	46110185	chunk0045_99_1	6.73207	AR_DHT_Control	chr12	46109235	46110833	-87164476	+	L1PBa	LINE	L1	3	1624	-5239	8
chr12	46150069	46150070	chunk0045_101_1	75.7624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	46149656	46150341	-87124968	+	L1ME3G	LINE	L1	17	663	-334	8
chr12	46246827	46246828	chunk0045_116_1	32.93645	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	46246032	46248874	-87026435	+	L1PA6	LINE	L1	1	2833	-3313	8
chr12	46264771	46264772	chunk0045_120_1	26.33265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	46264617	46264829	-87010480	-	L1PB3	LINE	L1	0	6154	5945	8
chr12	46281233	46281234	chunk0045_122_1	4.33434	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	46280960	46283511	-86991798	+	L1MA4	LINE	L1	757	3179	-4387	8
chr12	46329171	46329172	chunk0045_123_1	80.9542	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	46329046	46329441	-86945868	+	MLT1I-int	LTR	ERVL-MaLR	49	465	-922	8
chr12	46340666	46340667	chunk0045_125_1	4.22747	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	46339557	46341208	-86934101	-	L1PB1	LINE	L1	-1	6150	4566	8
chr12	46349438	46349439	chunk0045_126_1	7.80475	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	46349219	46349865	-86925444	-	L2c	LINE	L2	-8	3379	2742	8
chr12	46397001	46397002	chunk0045_131_1	48.1064	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	46396953	46397106	-86878203	-	L1M6	LINE	L1	-5624	872	702	8
chr12	46428407	46428408	chunk0045_134_1	5.6425	AR_DHT_Control	chr12	46427083	46428535	-86846774	+	L1PA17	LINE	L1	4639	6126	-743	8
chr12	46435427	46435428	chunk0045_135_1	25.7102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	46435411	46436158	-86839151	+	L1MC2	LINE	L1	5559	6335	-9	8
chr12	46464426	46464427	chunk0045_143_1	10.0802	AR_DHT_Control	chr12	46464338	46464429	-86810880	+	L2c	LINE	L2	3313	3387	0	8
chr12	46477845	46477846	chunk0045_144_1	40.4816	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	46477503	46478173	-86797136	+	L2b	LINE	L2	1451	2266	-1153	8
chr12	46539344	46539345	chunk0045_155_1	6.38514	AR_DHT_Control	chr12	46539260	46539382	-86735927	+	MIRb	SINE	MIR	75	200	-68	8
chr12	46633665	46633666	chunk0045_158_1	7.51711	AR_DHT_Control	chr12	46633287	46635491	-86639818	-	L1MC1	LINE	L1	-524	5984	3798	8
chr12	46872287	46872288	chunk0045_170_1	8.2993	AR_DHT_Control	chr12	46871770	46872575	-86402734	+	L2b	LINE	L2	2269	3159	-216	8
chr12	46873219	46873220	chunk0045_171_1	8.18895	AR_DHT_Control	chr12	46873193	46873261	-86402048	+	MIRb	SINE	MIR	190	257	-11	8
chr12	47082608	47082609	chunk0045_182_1	8.52187	AR_DHT_Control	chr12	47082583	47082678	-86192631	-	MIRb	SINE	MIR	-1	267	168	8
chr12	47338274	47338275	chunk0045_190_1	13.4959	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	47337421	47338305	-85937004	-	L1MD1	LINE	L1	-4467	2166	1274	8
chr12	47949901	47949902	chunk0045_213_1	19.80612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	47949859	47950046	-85325263	-	L2b	LINE	L2	-4	3371	3167	8
chr12	48109988	48109989	chunk0045_222_1	27.15048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	48109878	48110439	-85164870	-	L2b	LINE	L2	-5	3370	2752	8
chr12	48193910	48193911	chunk0045_230_1	9.17597	AR_DHT_Control	chr12	48193866	48193973	-85081336	+	L3	LINE	CR1	1007	1115	-2984	8
chr12	48545755	48545756	chunk0045_234_1	49.9817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	48545611	48546006	-84729303	+	L1MCb	LINE	L1	37	432	-5613	8
chr12	48746025	48746026	chunk0045_238_1	58.3686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	48746006	48746078	-84529231	-	L2a	LINE	L2	-18	3408	3335	8
chr12	48869259	48869260	chunk0045_240_1	56.52962	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	48869176	48869354	-84405955	-	MamRep1879	DNA	hAT-Tip100?	-30	186	7	8
chr12	48925531	48925532	chunk0045_241_1	12.4926	AR_DHT_Control	chr12	48925516	48925543	-84349766	+	(GACGG)n	Simple_repeat	Simple_repeat	1	27	0	8
chr12	49053759	49053760	chunk0045_246_1	31.81656	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	49053743	49053919	-84221390	-	L2a	LINE	L2	-11	3415	3210	8
chr12	49370715	49370716	chunk0045_255_1	13.2094	AR_DHT_Control	chr12	49370654	49370755	-83904554	-	FLAM_A	SINE	Alu	-12	130	30	8
chr12	49404065	49404066	chunk0045_256_1	5.0408	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	49404004	49404274	-83871035	-	L2c	LINE	L2	0	3387	3140	8
chr12	49451717	49451718	chunk0045_258_1	27.24434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	49451665	49452287	-83823022	-	L1M4a2	LINE	L1	-566	2090	1465	8
chr12	49474109	49474110	chunk0045_260_1	35.12503	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	49473930	49474127	-83801182	+	L1ME3B	LINE	L1	6014	6225	-17	8
chr12	49593791	49593792	chunk0045_265_1	12.9759	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	49593691	49593814	-83681495	+	AluJr	SINE	Alu	1	124	-188	8
chr12	49609830	49609831	chunk0045_266_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	49608517	49610508	-83664801	+	L1ME1	LINE	L1	1	2016	-4837	8
chr12	49629790	49629791	chunk0045_267_1	4.67092	AR_DHT_Control	chr12	49629523	49629817	-83645492	-	L2a	LINE	L2	-1	3425	3093	8
chr12	49692747	49692748	chunk0045_269_1	14.81321	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	49692665	49693365	-83581944	-	L2c	LINE	L2	-13	3374	2648	8
chr12	49735764	49735765	chunk0045_271_1	6.48643	AR_DHT_Control	chr12	49734956	49736004	-83539305	+	Harlequin-int	LTR	ERV1	263	1410	-5486	8
chr12	49873445	49873446	chunk0045_278_1	23.23396	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	49873381	49873609	-83401700	+	MamRep605	LTR?	LTR?	474	710	-139	8
chr12	50258123	50258124	chunk0045_292_1	30.7169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	50257923	50258332	-83016977	-	L1MC4a	LINE	L1	-990	7052	6670	8
chr12	50324878	50324879	chunk0045_295_1	13.6098	AR_DHT_Control	chr12	50323880	50325602	-82949707	+	HERVL-int	LTR	ERVL	3923	5654	0	8
chr12	50326803	50326804	chunk0045_297_1	14.01524	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	50326605	50326953	-82948356	+	MER51A	LTR	ERV1	309	634	0	8
chr12	50623585	50623586	chunk0045_305_1	146.6304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	50623569	50623708	-82651601	-	L1ME4b	LINE	L1	-139	753	619	8
chr12	50649411	50649412	chunk0045_307_1	7.36432	AR_DHT_Control	chr12	50648750	50649571	-82625738	+	L1M5	LINE	L1	4110	4993	-1153	8
chr12	50673057	50673058	chunk0045_310_1	31.0472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	50672708	50673179	-82602130	-	L1ME4a	LINE	L1	-229	5895	5549	8
chr12	50687242	50687243	chunk0045_312_1	11.1388	AR_DHT_Control	chr12	50687186	50687408	-82587901	-	MIRb	SINE	MIR	-39	229	7	8
chr12	50746407	50746408	chunk0045_319_1	18.67569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	50746407	50746481	-82528828	-	MER131	DNA?	DNA?	-115	100	20	8
chr12	50787103	50787104	chunk0045_321_1	57.8849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	50786733	50787455	-82487854	+	L1MCc	LINE	L1	832	1658	-5470	8
chr12	50835531	50835532	chunk0045_323_1	28.375	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	50835336	50836052	-82439257	+	L1PB1	LINE	L1	4954	5676	-475	8
chr12	51005920	51005921	chunk0045_328_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	51005824	51006011	-82269298	+	MER4D1	LTR	ERV1	5	187	-713	8
chr12	51146875	51146876	chunk0045_338_1	59.702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	51146664	51146916	-82128393	+	L2c	LINE	L2	3055	3355	-32	8
chr12	51211722	51211723	chunk0045_339_1	16.1285	AR_DHT_Control	chr12	51211460	51211786	-82063523	+	AluJo	SINE	Alu	1	311	-1	8
chr12	51222705	51222706	chunk0045_340_1	69.7183	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	51222424	51222788	-82052521	+	L2a	LINE	L2	2979	3425	-1	8
chr12	51232779	51232780	chunk0045_343_1	92.9211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	51232570	51233045	-82042264	-	L1ME1	LINE	L1	-266	5913	5458	8
chr12	51546316	51546317	chunk0045_350_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	51545560	51546359	-81728950	-	L1MC4	LINE	L1	-371	7671	6811	8
chr12	51590169	51590170	chunk0045_351_1	6.48643	AR_DHT_Control	chr12	51590164	51590296	-81685013	-	MIRb	SINE	MIR	-26	242	113	8
chr12	51740760	51740761	chunk0045_354_1	6.48643	AR_DHT_Control	chr12	51740272	51740793	-81534516	-	L1MA2	LINE	L1	-3124	4441	3936	8
chr12	51759811	51759812	chunk0045_355_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	51759768	51760148	-81515161	-	MSTD	LTR	ERVL-MaLR	-17	379	1	8
chr12	51993207	51993208	chunk0045_362_1	38.1359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	51992990	51993232	-81282077	-	L1MA9	LINE	L1	0	6312	6052	8
chr12	52026206	52026207	chunk0045_364_1	5.73469	AR_DHT_Control	chr12	52026121	52026231	-81249078	+	MIRc	SINE	MIR	141	253	-15	8
chr12	52032546	52032547	chunk0045_365_1	24.8253	AR_DHT_Control	chr12	52032531	52032632	-81242677	+	L2a	LINE	L2	3253	3355	-71	8
chr12	52111533	52111534	chunk0045_372_1	8.96258	AR_DHT_Control	chr12	52108791	52114962	-81160347	-	SATR2	Satellite	Satellite	0	6002	1	8
chr12	52126713	52126714	chunk0045_374_1	580.807	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	52126686	52127059	-81148250	+	L4_B_Mam	LINE	RTE-X	4317	4719	-222	8
chr12	52298721	52298722	chunk0045_382_1	18.2031	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	52298522	52298773	-80976536	-	MIR	SINE	MIR	0	262	6	8
chr12	52417879	52417880	chunk0045_386_1	17.8514	AR_DHT_Control	chr12	52417478	52417886	-80857423	+	L2a	LINE	L2	2886	3315	-60	8
chr12	52454926	52454927	chunk0045_387_1	8.27376	AR_DHT_Control	chr12	52454892	52455011	-80820298	-	L1M7	LINE	L1	-5951	267	152	8
chr12	52814645	52814646	chunk0045_401_1	79.2821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	52814474	52814681	-80460628	+	MIRc	SINE	MIR	28	251	-17	8
chr12	53250669	53250670	chunk0045_424_1	21.74804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	53250536	53250672	-80024637	-	AluSz6	SINE	Alu	-179	133	1	8
chr12	53427097	53427098	chunk0045_428_1	16.03252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	53427040	53427257	-79848052	-	L2a	LINE	L2	0	3426	3183	8
chr12	53463473	53463474	chunk0045_429_1	22.1807	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	53463369	53463703	-79811606	+	MER2	DNA	TcMar-Tigger	1	345	0	8
chr12	53557933	53557934	chunk0045_436_1	5.6425	AR_DHT_Control	chr12	53557736	53558053	-79717256	+	MER33	DNA	hAT-Charlie	1	323	-1	8
chr12	53569429	53569430	chunk0045_439_1	27.2832	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	53569303	53569669	-79705640	+	L2c	LINE	L2	2961	3363	-24	8
chr12	53570538	53570539	chunk0045_440_1	7.04615	AR_DHT_Control	chr12	53570513	53570729	-79704580	-	MLT1C	LTR	ERVL-MaLR	-13	454	193	8
chr12	53604170	53604171	chunk0045_448_1	26.3273	AR_DHT_Control	chr12	53604088	53604243	-79671066	-	UCON49	LINE	L2	-80	619	450	8
chr12	53916998	53916999	chunk0046_1_1	5.82105	AR_DHT_Control	chr12	53916276	53917543	-79357766	-	L1MEd	LINE	L1	-3779	2540	1157	8
chr12	54137061	54137062	chunk0046_12_1	68.2787	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	54136996	54137141	-79138168	+	MARNA	DNA	TcMar-Mariner	37	194	-392	8
chr12	54278124	54278125	chunk0046_20_1	4.76227	AR_DHT_Control	chr12	54278032	54278271	-78997038	+	MER20	DNA	hAT-Charlie	2	219	0	8
chr12	54387731	54387732	chunk0046_23_1	13.34919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	54387577	54387748	-78887561	+	MIRb	SINE	MIR	69	260	-8	8
chr12	54435546	54435547	chunk0046_25_1	26.269	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	54435499	54435718	-78839591	+	L2b	LINE	L2	3111	3425	-1	8
chr12	54445385	54445386	chunk0046_30_1	10.7897	AR_DHT_Control	chr12	54445353	54445596	-78829713	+	MIRb	SINE	MIR	17	247	-21	8
chr12	54512543	54512544	chunk0046_33_1	23.79461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	54512296	54512545	-78762764	+	MIR	SINE	MIR	6	241	-21	8
chr12	54512543	54512544	chunk0046_33_1	23.79461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	54512537	54512755	-78762554	-	L2c	LINE	L2	-36	3351	3111	8
chr12	54870818	54870819	chunk0046_41_1	65.0186	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	54870672	54870833	-78404476	-	MER58A	DNA	hAT-Charlie	0	224	37	8
chr12	54882121	54882122	chunk0046_44_1	16.26424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	54882113	54882328	-78392981	-	L2	LINE	L2	-3074	345	142	8
chr12	54934447	54934448	chunk0046_48_1	13.5543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	54934108	54934713	-78340596	-	MER41B	LTR	ERV1	-3	762	1	8
chr12	55420662	55420663	chunk0046_54_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	55420305	55420899	-77854410	+	L1PA14	LINE	L1	442	1030	-5659	8
chr12	55619300	55619301	chunk0046_56_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	55619240	55619405	-77655904	+	AluJb	SINE	Alu	134	310	-2	8
chr12	55909327	55909328	chunk0046_62_1	275.6357	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	55909204	55909389	-77365920	-	L2b	LINE	L2	-224	3151	2960	8
chr12	55921017	55921018	chunk0046_64_1	5.85263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	55920985	55921109	-77354200	-	L2c	LINE	L2	-577	2842	2716	8
chr12	55933880	55933881	chunk0046_66_1	9.83377	AR_DHT_Control	chr12	55933871	55934110	-77341199	-	MIRb	SINE	MIR	0	268	3	8
chr12	56677799	56677800	chunk0046_93_1	12.8082	AR_DHT_Control	chr12	56677353	56677930	-76597379	-	MER119	DNA	hAT-Charlie	0	583	1	8
chr12	56958855	56958856	chunk0046_101_1	5.44741	AR_DHT_Control	chr12	56958252	56962811	-76312498	+	L1P2	LINE	L1	9	4558	-1588	8
chr12	57259765	57259766	chunk0046_110_1	5.77762	AR_DHT_Control	chr12	57259685	57259823	-76015486	-	L2b	LINE	L2	-3	3372	3224	8
chr12	57277103	57277104	chunk0046_113_1	43.1754	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	57277096	57277117	-75998192	+	(A)n	Simple_repeat	Simple_repeat	1	21	0	8
chr12	57301425	57301426	chunk0046_118_1	65.564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	57301404	57301595	-75973714	+	MIRc	SINE	MIR	3	193	-75	8
chr12	57323654	57323655	chunk0046_121_1	155.7909	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	57323632	57323804	-75951505	+	UCON6	Unknown	Unknown	63	229	-208	8
chr12	57356150	57356151	chunk0046_123_1	10.1096	AR_DHT_Control	chr12	57355486	57356828	-75918481	-	L1ME1	LINE	L1	-1233	5086	3554	8
chr12	57388569	57388570	chunk0046_124_1	5.66005	AR_DHT_Control	chr12	57388306	57388763	-75886546	-	MER83	LTR	ERV1	-9	439	1	8
chr12	57439726	57439727	chunk0046_128_1	5.55081	AR_DHT_Control	chr12	57439147	57439815	-75835494	-	MLT1H2-int	LTR	ERVL-MaLR	-201	1208	518	8
chr12	57839922	57839923	chunk0046_135_1	6.06878	AR_DHT_Control	chr12	57839767	57839951	-75435358	+	MIR	SINE	MIR	76	258	-4	8
chr12	58093178	58093179	chunk0046_142_1	13.9477	AR_DHT_Control	chr12	58092985	58093382	-75181927	+	MER39	LTR	ERV1	307	707	0	8
chr12	58120332	58120333	chunk0046_144_1	128.6923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	58120009	58120391	-75154918	-	L1MC5	LINE	L1	-366	8938	8574	8
chr12	58134214	58134215	chunk0046_146_1	11.967	AR_DHT_Control	chr12	58134104	58134465	-75140844	+	L2c	LINE	L2	3006	3387	0	8
chr12	58158841	58158842	chunk0046_147_1	21.6627	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	58158651	58158981	-75116328	-	L1ME3	LINE	L1	-225	5937	5584	8
chr12	58203036	58203037	chunk0046_152_1	25.4119	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	58202983	58203189	-75072120	+	MIRc	SINE	MIR	30	243	-25	8
chr12	58205968	58205969	chunk0046_153_1	7.73593	AR_DHT_Control	chr12	58205865	58206088	-75069221	+	L2b	LINE	L2	2924	3136	-239	8
chr12	58309911	58309912	chunk0046_157_1	216.2373	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	58309855	58309963	-74965346	-	MIRb	SINE	MIR	-64	204	89	8
chr12	58343094	58343095	chunk0046_161_1	9.60169	AR_DHT_Control	chr12	58343017	58344198	-74931111	-	L1MC2	LINE	L1	0	6344	5153	8
chr12	58502125	58502126	chunk0046_166_1	23.26357	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	58501992	58502131	-74773178	+	L2c	LINE	L2	3257	3386	-1	8
chr12	58561223	58561224	chunk0046_173_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	58560352	58561333	-74713976	-	L1MB1	LINE	L1	-5	6163	5181	8
chr12	58620173	58620174	chunk0046_176_1	22.08974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	58620092	58620273	-74655036	+	L1M5	LINE	L1	4021	4196	-1950	8
chr12	58656458	58656459	chunk0046_178_1	6.35715	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	58655313	58656892	-74618417	-	MER52A	LTR	ERV1	0	1755	1	8
chr12	58680278	58680279	chunk0046_179_1	8.79298	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	58678163	58681005	-74594304	-	L1MA4A	LINE	L1	-4072	3494	377	8
chr12	58781741	58781742	chunk0046_186_1	15.19245	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	58781360	58781953	-74493356	-	MER70B	LTR	ERVL	0	578	1	8
chr12	58827370	58827371	chunk0046_190_1	6.48643	AR_DHT_Control	chr12	58825857	58827595	-74447714	+	L1MA4A	LINE	L1	3626	5483	-836	8
chr12	58939384	58939385	chunk0046_198_1	27.31313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	58939371	58939670	-74335639	-	MLT1A0	LTR	ERVL-MaLR	0	365	56	8
chr12	59055600	59055601	chunk0046_204_1	9.76856	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	59055258	59055632	-74219677	+	MamRep137	DNA	TcMar-Tigger	4	377	-133	8
chr12	59110417	59110418	chunk0046_207_1	4.81216	AR_DHT_Control	chr12	59110417	59110717	-74164592	-	L2a	LINE	L2	-607	2812	2489	8
chr12	59112093	59112094	chunk0046_208_1	7.43227	AR_DHT_Control	chr12	59111963	59112333	-74162976	+	MLT1A1	LTR	ERVL-MaLR	1	426	0	8
chr12	59263907	59263908	chunk0046_209_1	58.8417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	59263792	59263915	-74011394	-	L2a	LINE	L2	-5	3421	3266	8
chr12	59390080	59390081	chunk0046_217_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	59389708	59396158	-73879151	+	L1PA8A	LINE	L1	1	6446	0	8
chr12	59549981	59549982	chunk0046_220_1	28.43	AR_DHT_Control	chr12	59549823	59552518	-73722791	+	SATR1	Satellite	Satellite	1	3016	-347	8
chr12	59983550	59983551	chunk0046_227_1	5.41601	AR_DHT_Control	chr12	59983409	59983687	-73291622	+	AluSx1	SINE	Alu	3	279	-33	8
chr12	60168614	60168615	chunk0046_230_1	10.8743	AR_DHT_Control	chr12	60168031	60168949	-73106360	-	MER49	LTR	ERV1	0	923	5	8
chr12	60190016	60190017	chunk0046_233_1	6.33484	AR_DHT_Control	chr12	60189824	60190076	-73085233	+	L1MEg	LINE	L1	338	581	-5834	8
chr12	60237665	60237666	chunk0046_234_1	10.1791	AR_DHT_Control	chr12	60234374	60240761	-73034548	+	L1PA7	LINE	L1	6	6467	-2	8
chr12	60263224	60263225	chunk0046_238_1	11.3321	AR_DHT_Control	chr12	60263046	60264447	-73010862	-	L1PB	LINE	L1	-701	5450	4046	8
chr12	60380847	60380848	chunk0046_240_1	7.36432	AR_DHT_Control	chr12	60379213	60380990	-72894319	+	L1PA10	LINE	L1	3955	5743	-746	8
chr12	60403109	60403110	chunk0046_241_1	45.1596	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	60403095	60403714	-72871595	-	L2	LINE	L2	-711	2708	2077	8
chr12	60423938	60423939	chunk0046_243_1	13.2288	AR_DHT_Control	chr12	60423717	60424092	-72851217	-	LTR59	LTR	ERV1	-10	587	230	8
chr12	60438115	60438116	chunk0046_244_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	60437955	60438743	-72836566	-	LTR1E	LTR	ERV1	0	804	1	8
chr12	60469333	60469334	chunk0046_245_1	73.03692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	60469088	60469870	-72805439	-	L1PA8	LINE	L1	-3	6169	5330	8
chr12	60526759	60526760	chunk0046_249_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	60526702	60528010	-72747299	-	L1MA7	LINE	L1	-21	6474	5111	8
chr12	60545095	60545096	chunk0046_254_1	23.3934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	60544570	60546948	-72728361	+	L1MC3	LINE	L1	5478	7837	-366	8
chr12	60565191	60565192	chunk0046_255_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	60562287	60565782	-72709527	-	L1PA15	LINE	L1	-2952	3814	290	8
chr12	60678737	60678738	chunk0046_258_1	46.31031	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	60678052	60679854	-72595455	-	L1MA5A	LINE	L1	-4760	2089	63	8
chr12	60704768	60704769	chunk0046_259_1	80.0394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	60704719	60704873	-72570436	+	LTR40a	LTR	ERVL	1	168	-351	8
chr12	60710426	60710427	chunk0046_261_1	179.7221	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	60708580	60711549	-72563760	-	L1M3de	LINE	L1	-4367	3198	838	8
chr12	61098253	61098254	chunk0046_266_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	61097983	61098461	-72176848	+	L1PA17	LINE	L1	440	1293	-6041	8
chr12	61246823	61246824	chunk0046_267_1	34.2169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	61246477	61249057	-72026252	+	Tigger2	DNA	TcMar-Tigger	2	2718	0	8
chr12	61283326	61283327	chunk0046_271_1	36.76468	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	61283296	61283689	-71991620	+	Zaphod	DNA	hAT-Tip100	52	479	-3552	8
chr12	61300843	61300844	chunk0046_272_1	12.1886	AR_DHT_Control	chr12	61300407	61300978	-71974331	+	MER67C	LTR	ERV1	3	586	-125	8
chr12	61387307	61387308	chunk0046_273_1	42.0405	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	61387251	61387848	-71887461	-	L2c	LINE	L2	-397	3022	2391	8
chr12	61664216	61664217	chunk0046_279_1	5.12066	AR_DHT_Control	chr12	61660507	61664822	-71610487	-	L1PA8A	LINE	L1	-2186	4275	10	8
chr12	61734737	61734738	chunk0046_280_1	8.68286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	61734677	61734745	-71540564	+	MIR	SINE	MIR	29	98	-164	8
chr12	61814044	61814045	chunk0046_281_1	10.1096	AR_DHT_Control	chr12	61813957	61814065	-71461244	-	L2a	LINE	L2	-42	3333	3222	8
chr12	62015247	62015248	chunk0046_285_1	13.18238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	62015173	62015343	-71259966	+	L2a	LINE	L2	3239	3425	-1	8
chr12	62273339	62273340	chunk0046_305_1	34.03609	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	62272910	62273443	-71001866	+	L2c	LINE	L2	2787	3387	0	8
chr12	62368942	62368943	chunk0046_309_1	7.36432	AR_DHT_Control	chr12	62367490	62368962	-70906347	-	L1PA7	LINE	L1	-2663	3483	2008	8
chr12	62520554	62520555	chunk0046_318_1	114.7102	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	62520113	62520651	-70754658	-	Charlie1a	DNA	hAT-Charlie	-487	968	328	8
chr12	62533631	62533632	chunk0046_320_1	98.84823	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	62533369	62533984	-70741325	-	L1MC4	LINE	L1	-921	7121	6458	8
chr12	62621472	62621473	chunk0046_325_1	11.0699	AR_DHT_Control	chr12	62621279	62621479	-70653830	+	L2b	LINE	L2	3193	3374	-1	8
chr12	62725118	62725119	chunk0046_328_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	62724665	62725260	-70550049	-	Kanga1b	DNA	TcMar-Tc2	-3	776	168	8
chr12	62890161	62890162	chunk0046_336_1	11.97744	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	62889507	62890175	-70385134	+	L1MC	LINE	L1	4744	5398	-748	8
chr12	62967856	62967857	chunk0046_350_1	12.8513	AR_DHT_Control	chr12	62967801	62968019	-70307290	-	L2c	LINE	L2	-42	3345	3101	8
chr12	62969810	62969811	chunk0046_352_1	58.40143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	62969480	62970065	-70305244	-	L2a	LINE	L2	0	3426	2787	8
chr12	63008891	63008892	chunk0046_354_1	45.3312	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	63008851	63009127	-70266182	+	MER34C_	LTR	ERV1	308	585	0	8
chr12	63010796	63010797	chunk0046_355_1	10.2957	AR_DHT_Control	chr12	63010637	63011220	-70264089	-	LTR33C	LTR	ERVL	-15	614	1	8
chr12	63221417	63221418	chunk0046_366_1	11.4948	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	63221193	63221425	-70053884	+	MIR	SINE	MIR	15	237	-25	8
chr12	63236879	63236880	chunk0046_367_1	10.6593	AR_DHT_Control	chr12	63236306	63237368	-70037941	+	L2a	LINE	L2	2223	3425	-1	8
chr12	63339847	63339848	chunk0046_369_1	15.32536	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	63336890	63343011	-69932298	+	L1PA6	LINE	L1	178	6323	-4	8
chr12	63346220	63346221	chunk0046_371_1	10.0576	AR_DHT_Control	chr12	63346219	63346841	-69928468	-	L1ME2	LINE	L1	-549	5788	5120	8
chr12	63461479	63461480	chunk0046_377_1	24.0709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	63460649	63462057	-69813252	+	L1PB1	LINE	L1	1950	3399	-3463	8
chr12	63512718	63512719	chunk0046_381_1	6.48643	AR_DHT_Control	chr12	63512620	63512797	-69762512	+	L4_C_Mam	LINE	RTE-X	4394	4578	-560	8
chr12	63764686	63764687	chunk0046_385_1	11.6447	AR_DHT_Control	chr12	63764540	63765031	-69510278	-	LTR40a	LTR	ERVL	-2	517	10	8
chr12	63806299	63806300	chunk0046_387_1	45.1498	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	63806160	63806658	-69468651	-	L2a	LINE	L2	-4	3422	2893	8
chr12	63841873	63841874	chunk0046_389_1	48.6051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	63841658	63841931	-69433378	+	L2c	LINE	L2	3051	3346	-41	8
chr12	63869983	63869984	chunk0046_392_1	23.9677	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	63869884	63870005	-69405304	-	MIRb	SINE	MIR	-100	168	58	8
chr12	63875277	63875278	chunk0046_393_1	7.92366	AR_DHT_Control	chr12	63875236	63875280	-69400029	+	L2c	LINE	L2	3333	3376	-11	8
chr12	64028694	64028695	chunk0046_399_1	5.6425	AR_DHT_Control	chr12	64028492	64028850	-69246459	-	MLT1A0	LTR	ERVL-MaLR	-2	363	1	8
chr12	64069160	64069161	chunk0046_400_1	19.4211	AR_DHT_Control	chr12	64069074	64069249	-69206060	+	MER102c	DNA	hAT-Charlie	118	331	0	8
chr12	64429171	64429172	chunk0046_411_1	254.0782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	64428605	64429397	-68845912	-	Ricksha_b	DNA	MULE-MuDR	0	1255	404	8
chr12	64634164	64634165	chunk0046_427_1	99.88286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	64634147	64634316	-68640993	-	HSMAR2	DNA	TcMar-Mariner	-801	501	333	8
chr12	64734614	64734615	chunk0046_432_1	77.0092	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	64734601	64734791	-68540518	+	L2a	LINE	L2	2992	3186	-201	8
chr12	64794205	64794206	chunk0046_433_1	7.24914	AR_DHT_Control	chr12	64793810	64794439	-68480870	-	HAL1	LINE	L1	-628	1879	1194	8
chr12	64872422	64872423	chunk0046_445_1	13.0632	AR_DHT_Control	chr12	64872327	64872454	-68402855	+	MER58A	DNA	hAT-Charlie	65	223	-1	8
chr12	64883308	64883309	chunk0046_447_1	12.8609	AR_DHT_Control	chr12	64882751	64883394	-68391915	+	MLT1K	LTR	ERVL-MaLR	1	595	0	8
chr12	64941762	64941763	chunk0046_455_1	7.12448	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	64941366	64941915	-68333394	+	MLT1D	LTR	ERVL-MaLR	1	505	0	8
chr12	64966987	64966988	chunk0046_459_1	30.9277	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	64966592	64967525	-68307784	+	L1PB	LINE	L1	4648	5577	-577	8
chr12	65037003	65037004	chunk0047_4_1	4.83532	AR_DHT_Control	chr12	65036587	65038260	-68237049	-	L1PA16	LINE	L1	-3598	3317	1648	8
chr12	65630726	65630727	chunk0047_20_1	58.6876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	65630587	65630807	-67644502	+	L2c	LINE	L2	3182	3387	0	8
chr12	66177662	66177663	chunk0047_31_1	4.83532	AR_DHT_Control	chr12	66177431	66177787	-67097522	+	MER21C	LTR	ERVL	448	809	-129	8
chr12	66316051	66316052	chunk0047_33_1	11.3499	AR_DHT_Control	chr12	66315977	66316322	-66958987	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	8
chr12	66639442	66639443	chunk0047_37_1	10.1791	AR_DHT_Control	chr12	66639256	66639505	-66635804	-	L2b	LINE	L2	-188	3199	2956	8
chr12	66745221	66745222	chunk0047_42_1	72.1267	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	66745019	66745293	-66530016	+	Mam_R4	LINE	Dong-R4	2685	2966	-843	8
chr12	67047865	67047866	chunk0047_47_1	7.53305	AR_DHT_Control	chr12	67047656	67048076	-66227233	-	L1ME4c	LINE	L1	-329	501	312	8
chr12	67437721	67437722	chunk0047_57_1	12.7204	AR_DHT_Control	chr12	67437523	67437887	-65837422	-	L2a	LINE	L2	-1	3425	3039	8
chr12	67708136	67708137	chunk0047_71_1	32.9442	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	67708080	67708325	-65566984	+	MIRc	SINE	MIR	3	266	-2	8
chr12	67999404	67999405	chunk0047_83_1	11.8978	AR_DHT_Control	chr12	67999141	67999998	-65275311	+	L1MC4a	LINE	L1	6598	7466	-416	8
chr12	68024771	68024772	chunk0047_84_1	42.4004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	68023988	68024850	-65250459	+	L2a	LINE	L2	2487	3421	-5	8
chr12	68445965	68445966	chunk0047_88_1	5.46037	AR_DHT_Control	chr12	68445698	68446429	-64828880	+	L1MA5A	LINE	L1	5558	6297	0	8
chr12	68600958	68600959	chunk0047_91_1	22.49551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	68600904	68601070	-64674239	+	L1MC5a	LINE	L1	2351	2482	-295	8
chr12	68755569	68755570	chunk0047_100_1	30.97172	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	68755494	68755914	-64519395	-	MSTB	LTR	ERVL-MaLR	0	426	1	8
chr12	68848136	68848137	chunk0047_103_1	20.2615	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	68847882	68848142	-64427167	+	AluJr4	SINE	Alu	1	296	-16	8
chr12	68937493	68937494	chunk0047_115_1	26.3039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	68937304	68937522	-64337787	+	MER20	DNA	hAT-Charlie	1	219	0	8
chr12	69101757	69101758	chunk0047_121_1	12.47512	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	69100979	69102277	-64173032	+	HSMAR2	DNA	TcMar-Mariner	1	1301	-1	8
chr12	69186375	69186376	chunk0047_123_1	9.01771	AR_DHT_Control	chr12	69185978	69186419	-64088890	+	MER4A1	LTR	ERV1	1	472	0	8
chr12	69333009	69333010	chunk0047_127_1	5.00261	AR_DHT_Control	chr12	69332914	69333204	-63942105	-	LTR22	LTR	ERVK	-279	292	1	8
chr12	69345987	69345988	chunk0047_129_1	85.5954	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	69345958	69346087	-63929222	+	LTR83	LTR	ERVL	516	635	-145	8
chr12	69511848	69511849	chunk0047_134_1	51.88474	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	69511672	69511875	-63763434	+	MIR	SINE	MIR	41	256	-6	8
chr12	69554071	69554072	chunk0047_135_1	64.4953	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	69553986	69554171	-63721138	+	AmnSINE1	SINE	5S-Deu-L2	277	454	-121	8
chr12	69580982	69580983	chunk0047_139_1	8.80746	AR_DHT_Control	chr12	69580757	69581152	-63694157	-	MLT1H	LTR	ERVL-MaLR	-13	536	152	8
chr12	69703483	69703484	chunk0047_150_1	99.4159	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	69703454	69703638	-63571671	-	Charlie22a	DNA	hAT-Charlie	-3	488	273	8
chr12	69706151	69706152	chunk0047_151_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	69705584	69706663	-63568646	+	L2a	LINE	L2	2330	3421	-5	8
chr12	69719397	69719398	chunk0047_153_1	133.13254	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	69719200	69719440	-63555869	+	MIRc	SINE	MIR	13	268	0	8
chr12	69751302	69751303	chunk0047_155_1	6.49378	AR_DHT_Control	chr12	69750279	69751991	-63523318	-	L1MC5a	LINE	L1	-135	2642	742	8
chr12	69751687	69751688	chunk0047_156_1	4.88663	AR_DHT_Control	chr12	69750279	69751991	-63523318	-	L1MC5a	LINE	L1	-135	2642	742	8
chr12	70549931	70549932	chunk0047_173_1	13.62803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	70549928	70550495	-62724814	-	L2c	LINE	L2	-4	3383	2822	8
chr12	70644244	70644245	chunk0047_179_1	11.4187	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	70643919	70644255	-62631054	+	MER57F	LTR	ERV1	88	421	-14	8
chr12	70696902	70696903	chunk0047_180_1	7.2534	AR_DHT_Control	chr12	70696592	70697851	-62577458	-	L1MB8	LINE	L1	0	6178	4834	8
chr12	71080554	71080555	chunk0047_194_1	6.48643	AR_DHT_Control	chr12	71080539	71080664	-62194645	-	FLAM_A	SINE	Alu	-19	123	1	8
chr12	71178353	71178354	chunk0047_200_1	40.1444	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	71178285	71178756	-62096553	+	L1PB3	LINE	L1	3284	3757	-3105	8
chr12	71572669	71572670	chunk0047_206_1	17.53786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	71572381	71572743	-61702566	+	MARNA	DNA	TcMar-Mariner	210	577	-9	8
chr12	71672023	71672024	chunk0047_216_1	37.5412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	71670955	71673426	-61601883	-	Tigger2	DNA	TcMar-Tigger	-235	2483	1	8
chr12	71721953	71721954	chunk0047_219_1	99.23179	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	71721858	71722436	-61552873	+	MER72B	LTR	ERV1	166	763	-5	8
chr12	71723097	71723098	chunk0047_220_1	29.16181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	71723052	71723156	-61552153	+	L1M4	LINE	L1	2350	2453	-3762	8
chr12	71756796	71756797	chunk0047_222_1	23.2018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	71756778	71757017	-61518292	-	MIR	SINE	MIR	0	262	18	8
chr12	71844676	71844677	chunk0047_229_1	5.69781	AR_DHT_Control	chr12	71844411	71844760	-61430549	+	L2c	LINE	L2	3040	3385	-2	8
chr12	71856896	71856897	chunk0047_230_1	19.0466	AR_DHT_Control	chr12	71856878	71857039	-61418270	+	MIRb	SINE	MIR	71	251	-17	8
chr12	71889880	71889881	chunk0047_231_1	42.11468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	71889631	71890085	-61385224	-	L1PA15	LINE	L1	-2	6163	5712	8
chr12	71949350	71949351	chunk0047_235_1	9.74833	AR_DHT_Control	chr12	71949083	71949428	-61325881	-	MamRep434	DNA	TcMar-Tigger	0	426	1	8
chr12	72241708	72241709	chunk0047_242_1	12.73	AR_DHT_Control	chr12	72241164	72242226	-61033083	-	L1ME1	LINE	L1	-28	6549	5453	8
chr12	72255455	72255456	chunk0047_243_1	6.3126	AR_DHT_Control	chr12	72255193	72255834	-61019475	-	MER70B	LTR	ERVL	-1	577	2	8
chr12	72364583	72364584	chunk0047_249_1	18.14268	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	72364277	72364588	-60910721	+	L2a	LINE	L2	3059	3425	-1	8
chr12	72485550	72485551	chunk0047_256_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	72484780	72489345	-60785964	+	L1MA9	LINE	L1	408	4753	-2809	8
chr12	72558139	72558140	chunk0047_257_1	28.40491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	72558063	72558507	-60716802	-	L2c	LINE	L2	-27	3360	2910	8
chr12	72590297	72590298	chunk0047_258_1	7.36432	AR_DHT_Control	chr12	72589499	72590938	-60684371	-	L1MEf	LINE	L1	-2581	3801	2238	8
chr12	72655604	72655605	chunk0047_259_1	6.98475	AR_DHT_Control	chr12	72655374	72655701	-60619608	+	L2c	LINE	L2	2973	3332	-55	8
chr12	72757287	72757288	chunk0047_260_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	72756651	72757594	-60517715	+	L1MA4A	LINE	L1	723	1663	-5903	8
chr12	72971687	72971688	chunk0047_269_1	19.61162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	72971429	72971748	-60303561	-	L4_A_Mam	LINE	RTE-X	-21	4969	4609	8
chr12	73062102	73062103	chunk0047_274_1	10.1791	AR_DHT_Control	chr12	73061742	73063399	-60211910	+	L1MB1	LINE	L1	4584	6174	-15	8
chr12	73072555	73072556	chunk0047_275_1	5.80784	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	73072554	73073477	-60201832	-	L1PA14	LINE	L1	-5897	888	13	8
chr12	73094164	73094165	chunk0047_276_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	73093383	73094587	-60180722	+	THE1B-int	LTR	ERVL-MaLR	1	1211	-369	8
chr12	73307012	73307013	chunk0047_283_1	7.36432	AR_DHT_Control	chr12	73306997	73307322	-59967987	-	L1ME4a	LINE	L1	-255	5869	5548	8
chr12	73476099	73476100	chunk0047_287_1	16.57028	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	73476025	73476534	-59798775	+	LTR40a	LTR	ERVL	1	519	0	8
chr12	73529415	73529416	chunk0047_290_1	44.0512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	73529187	73529792	-59745517	-	L1PB	LINE	L1	-842	5304	4691	8
chr12	73629593	73629594	chunk0047_296_1	32.2926	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	73629134	73629633	-59645676	-	PrimLTR79	LTR	ERV1	0	503	1	8
chr12	73658319	73658320	chunk0047_298_1	17.43995	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	73658085	73658452	-59616857	+	LTR44	LTR	ERV1	1	377	-142	8
chr12	73692759	73692760	chunk0047_299_1	17.5473	AR_DHT_Control	chr12	73692517	73693270	-59582039	+	L1MA1	LINE	L1	6961	7714	-7	8
chr12	73711597	73711598	chunk0047_300_1	27.4757	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	73711012	73711812	-59563497	-	L1MC3	LINE	L1	-1140	7063	6152	8
chr12	73835327	73835328	chunk0047_303_1	66.7946	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	73835301	73835506	-59439803	+	MIR	SINE	MIR	5	233	-29	8
chr12	73867355	73867356	chunk0047_305_1	32.59962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	73867283	73867363	-59407946	+	L2b	LINE	L2	3297	3375	0	8
chr12	73888441	73888442	chunk0047_306_1	8.27376	AR_DHT_Control	chr12	73888432	73889106	-59386203	-	LTR9A1	LTR	ERV1	0	728	1	8
chr12	73955718	73955719	chunk0047_309_1	12.7844	AR_DHT_Control	chr12	73955705	73956163	-59319146	+	LTR55	LTR	ERVL?	6	538	-10	8
chr12	73964866	73964867	chunk0047_310_1	175.1313	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	73964850	73965055	-59310254	+	MLT1D	LTR	ERVL-MaLR	1	242	-263	8
chr12	74093853	74093854	chunk0047_315_1	54.9823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	74093324	74094359	-59180950	-	L1MB1	LINE	L1	-3218	3158	2101	8
chr12	74310249	74310250	chunk0047_322_1	6.93299	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	74309891	74310454	-58964855	-	MLT1K	LTR	ERVL-MaLR	-18	577	20	8
chr12	74367012	74367013	chunk0047_329_1	17.03331	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	74366527	74369352	-58905957	+	L1MC3	LINE	L1	6024	8868	-8	8
chr12	74392299	74392300	chunk0047_331_1	19.80249	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	74392293	74392487	-58882822	+	HAL1ME	LINE	L1	2248	2441	-24	8
chr12	74418260	74418261	chunk0047_332_1	9.63462	AR_DHT_Control	chr12	74418162	74418378	-58856931	-	MER58A	DNA	hAT-Charlie	-2	222	2	8
chr12	74528504	74528505	chunk0047_334_1	21.4394	AR_DHT_Control	chr12	74528360	74528614	-58746695	-	ERVL-B4-int	LTR	ERVL	0	5714	5359	8
chr12	74544733	74544734	chunk0047_335_1	5.55081	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	74544465	74544804	-58730505	+	L1M5	LINE	L1	4801	5177	-969	8
chr12	74586814	74586815	chunk0047_337_1	7.08133	AR_DHT_Control	chr12	74586455	74586845	-58688464	-	L1MD2	LINE	L1	-6120	427	25	8
chr12	74610813	74610814	chunk0047_338_1	98.44992	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	74610671	74610880	-58664429	+	MIR	SINE	MIR	8	230	-32	8
chr12	74624372	74624373	chunk0047_341_1	47.3426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	74623206	74624998	-58650311	+	L1MC1	LINE	L1	4390	6315	-18	8
chr12	74759739	74759740	chunk0047_343_1	19.59298	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	74757316	74760462	-58514847	-	L1PB1	LINE	L1	-963	5899	2776	8
chr12	74817533	74817534	chunk0047_346_1	13.91024	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	74816332	74817882	-58457427	+	MER52A	LTR	ERV1	1	1753	-2	8
chr12	74907473	74907474	chunk0047_347_1	7.36432	AR_DHT_Control	chr12	74907407	74907750	-58367559	-	L2c	LINE	L2	-129	3258	2917	8
chr12	75000024	75000025	chunk0047_355_1	8.27376	AR_DHT_Control	chr12	75000024	75000385	-58274924	-	L1MA9	LINE	L1	-153	6159	5797	8
chr12	75078586	75078587	chunk0047_365_1	9.21264	AR_DHT_Control	chr12	75078509	75078734	-58196575	-	MIR	SINE	MIR	-1	261	32	8
chr12	75138571	75138572	chunk0047_370_1	27.1102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	75138521	75138584	-58136725	+	MER5A	DNA	hAT-Charlie	125	184	-5	8
chr12	75248491	75248492	chunk0047_379_1	66.771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	75248252	75248708	-58026601	+	L1ME3Cz	LINE	L1	12	510	-487	8
chr12	75270991	75270992	chunk0047_382_1	37.9681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	75269808	75271117	-58004192	+	L2b	LINE	L2	1926	3375	0	8
chr12	75342531	75342532	chunk0047_385_1	19.9693	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	75342507	75343347	-57931962	-	L1MEc	LINE	L1	-1306	5013	4108	8
chr12	75404764	75404765	chunk0047_386_1	7.09019	AR_DHT_Control	chr12	75403065	75405255	-57870054	+	MER31-int	LTR	ERV1	13	2058	-2878	8
chr12	75489381	75489382	chunk0047_387_1	11.3663	AR_DHT_Control	chr12	75489286	75490176	-57785133	+	L2a	LINE	L2	2142	3240	-186	8
chr12	75492741	75492742	chunk0047_388_1	11.32919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	75492718	75493116	-57782193	-	L2c	LINE	L2	0	3387	2951	8
chr12	75618617	75618618	chunk0047_393_1	12.1886	AR_DHT_Control	chr12	75617141	75620212	-57655097	+	L1PA7	LINE	L1	3084	6141	-13	8
chr12	75662016	75662017	chunk0047_395_1	75.5176	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	75661817	75662017	-57613292	+	MIRb	SINE	MIR	59	268	0	8
chr12	75782448	75782449	chunk0047_400_1	39.76783	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	75782023	75782749	-57492560	+	L1MB2	LINE	L1	5449	6167	-4	8
chr12	75819708	75819709	chunk0047_403_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	75819504	75819731	-57455578	+	MIRb	SINE	MIR	25	262	-6	8
chr12	75850655	75850656	chunk0047_404_1	12.52335	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	75850633	75850696	-57424613	+	(TC)n	Simple_repeat	Simple_repeat	1	64	0	8
chr12	75859479	75859480	chunk0047_406_1	9.45481	AR_DHT_Control	chr12	75859260	75859514	-57415795	+	MIRb	SINE	MIR	2	254	-14	8
chr12	75863379	75863380	chunk0047_407_1	5.73759	AR_DHT_Control	chr12	75863164	75863475	-57411834	+	LTR90A	LTR	LTR	20	335	-641	8
chr12	75893943	75893944	chunk0047_409_1	50.9288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	75893918	75894175	-57381134	+	Charlie23a	DNA	hAT-Charlie	1	244	-95	8
chr12	75989318	75989319	chunk0047_413_1	6.98722	AR_DHT_Control	chr12	75988881	75989450	-57285859	+	L1P3	LINE	L1	2621	3189	-2957	8
chr12	76092433	76092434	chunk0047_419_1	6.37684	AR_DHT_Control	chr12	76092417	76092895	-57182414	+	MER66A	LTR	ERV1	1	478	0	8
chr12	76096346	76096347	chunk0047_420_1	9.79111	AR_DHT_Control	chr12	76096345	76096455	-57178854	-	L2c	LINE	L2	-67	3320	3200	8
chr12	76117306	76117307	chunk0047_423_1	31.6395	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	76117272	76117409	-57157900	+	AluJr	SINE	Alu	137	272	-40	8
chr12	76264791	76264792	chunk0047_429_1	7.50454	AR_DHT_Control	chr12	76264575	76264949	-57010360	-	Tigger4	DNA	TcMar-Tigger	-1160	1571	1189	8
chr12	76387096	76387097	chunk0047_435_1	8.96258	AR_DHT_Control	chr12	76386924	76387234	-56888075	+	Charlie6	DNA	hAT-Charlie	1	329	-3171	8
chr12	76402506	76402507	chunk0047_436_1	13.1127	AR_DHT_Control	chr12	76402411	76402557	-56872752	+	Charlie17a	DNA	hAT-Charlie	31	189	-28	8
chr12	76430220	76430221	chunk0047_440_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	76429910	76430315	-56844994	+	L1MA9	LINE	L1	1836	2314	-5172	8
chr12	76439995	76439996	chunk0047_442_1	18.98799	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	76439583	76440073	-56835236	-	L1ME3D	LINE	L1	-2575	3571	3007	8
chr12	76457271	76457272	chunk0047_445_1	13.00022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	76456616	76457599	-56817710	-	Tigger2b_Pri	DNA	TcMar-Tigger	-61	1007	1	8
chr12	76520354	76520355	chunk0047_447_1	13.9359	AR_DHT_Control	chr12	76520313	76520401	-56754908	+	L2a	LINE	L2	3214	3324	-102	8
chr12	76611832	76611833	chunk0047_450_1	6.48643	AR_DHT_Control	chr12	76611682	76611903	-56663406	-	MLT1G	LTR	ERVL-MaLR	-296	295	82	8
chr12	76646084	76646085	chunk0047_454_1	6.54035	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	76644812	76646340	-56628969	+	MER52A	LTR	ERV1	138	1755	0	8
chr12	76719188	76719189	chunk0047_455_1	8.2993	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	76718858	76721514	-56553795	+	L1M1	LINE	L1	14	3394	-4171	8
chr12	76785669	76785670	chunk0047_457_1	14.8157	AR_DHT_Control	chr12	76785610	76785962	-56489347	-	L2c	LINE	L2	-187	3200	2825	8
chr12	76932436	76932437	chunk0048_4_1	7.14391	AR_DHT_Control	chr12	76932410	76932618	-56342691	-	MER102c	DNA	hAT-Charlie	-29	302	88	8
chr12	76999542	76999543	chunk0048_10_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	76999396	76999638	-56275671	+	MLT1L	LTR	ERVL-MaLR	347	601	-9	8
chr12	77077651	77077652	chunk0048_15_1	23.85082	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	77077304	77078282	-56197027	-	MLT1J2-int	LTR	ERVL-MaLR	-150	1237	245	8
chr12	77401474	77401475	chunk0048_26_1	11.1735	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	77401450	77401578	-55873731	+	MIRb	SINE	MIR	109	236	-32	8
chr12	77742810	77742811	chunk0048_30_1	104.64891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	77742369	77743398	-55531911	+	Tigger2b_Pri	DNA	TcMar-Tigger	4	1068	0	8
chr12	77768457	77768458	chunk0048_35_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	77767310	77768899	-55506410	-	MER52A	LTR	ERV1	0	1755	1	8
chr12	78012794	78012795	chunk0048_42_1	11.28468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	78012759	78012959	-55262350	+	L2a	LINE	L2	3211	3421	-5	8
chr12	78315154	78315155	chunk0048_56_1	45.77843	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	78314923	78315156	-54960153	-	MIR	SINE	MIR	-13	249	21	8
chr12	78398970	78398971	chunk0048_61_1	9.93796	AR_DHT_Control	chr12	78398903	78398983	-54876326	+	L3	LINE	CR1	3764	3842	-257	8
chr12	79015851	79015852	chunk0048_80_1	16.6987	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	79015836	79015946	-54259363	-	MIRc	SINE	MIR	-94	174	63	8
chr12	79075974	79075975	chunk0048_82_1	5.73469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	79075910	79076396	-54198913	-	MER39	LTR	ERV1	0	707	5	8
chr12	79093941	79093942	chunk0048_83_1	50.1277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	79091300	79094277	-54181032	-	LTR49-int	LTR	ERV1	-214	6117	2073	8
chr12	79278225	79278226	chunk0048_90_1	92.7084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	79276693	79281674	-53993635	+	L1PB3	LINE	L1	1934	6870	0	8
chr12	79361188	79361189	chunk0048_100_1	16.00293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	79361176	79361383	-53913926	-	MIR	SINE	MIR	-31	231	28	8
chr12	79422081	79422082	chunk0048_107_1	5.6503	AR_DHT_Control	chr12	79421784	79422663	-53852646	-	L1ME3C	LINE	L1	-1033	1456	519	8
chr12	79464831	79464832	chunk0048_108_1	6.75904	AR_DHT_Control	chr12	79460427	79471195	-53804114	+	SATR2	Satellite	Satellite	1	10678	-1	8
chr12	79504316	79504317	chunk0048_109_1	5.12066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	79504228	79506419	-53768890	+	L1PREC2	LINE	L1	1034	3216	-4939	8
chr12	79629709	79629710	chunk0048_114_1	69.9618	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	79628477	79630315	-53644994	+	L1MEc	LINE	L1	2130	4233	-2773	8
chr12	79847668	79847669	chunk0048_122_1	74.6197	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	79847537	79847787	-53427522	-	L2a	LINE	L2	0	3426	3138	8
chr12	79864349	79864350	chunk0048_124_1	20.91899	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	79861341	79867483	-53407826	+	L1PA7	LINE	L1	5	6153	-1	8
chr12	79874803	79874804	chunk0048_128_1	93.69743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	79874715	79874821	-53400488	-	MIRb	SINE	MIR	-16	252	148	8
chr12	79984110	79984111	chunk0048_137_1	8.76676	AR_DHT_Control	chr12	79983902	79984295	-53291014	-	L2a	LINE	L2	0	3426	2877	8
chr12	80051333	80051334	chunk0048_140_1	9.45481	AR_DHT_Control	chr12	80050769	80052074	-53223235	-	L1MA4A	LINE	L1	-5	6298	5021	8
chr12	80053298	80053299	chunk0048_141_1	4.64636	AR_DHT_Control	chr12	80053182	80053426	-53221883	-	L1MEi	LINE	L1	-1967	245	5	8
chr12	80081533	80081534	chunk0048_142_1	23.4743	AR_DHT_Control	chr12	80080827	80084722	-53190587	-	L1PA7	LINE	L1	-2529	3932	8	8
chr12	80585348	80585349	chunk0048_155_1	254.798	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	80585042	80585538	-52689771	+	L2a	LINE	L2	2331	2843	-576	8
chr12	80612699	80612700	chunk0048_156_1	20.4662	AR_DHT_Control	chr12	80612277	80612908	-52662401	+	L1MD2	LINE	L1	5258	5873	-486	8
chr12	80674104	80674105	chunk0048_161_1	32.4307	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	80673897	80674126	-52601183	-	MIR	SINE	MIR	-14	248	40	8
chr12	80840498	80840499	chunk0048_170_1	9.55577	AR_DHT_Control	chr12	80840498	80840606	-52434703	+	MIRc	SINE	MIR	146	249	-19	8
chr12	80906799	80906800	chunk0048_175_1	3.65606	AR_DHT_Control	chr12	80906629	80906841	-52368468	+	L1PA15	LINE	L1	5954	6165	0	8
chr12	80916914	80916915	chunk0048_176_1	44.3155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	80916876	80917198	-52358111	-	L2a	LINE	L2	-2	3424	3028	8
chr12	80917840	80917841	chunk0048_177_1	73.8663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	80917835	80917947	-52357362	-	L1MEd	LINE	L1	-6326	760	651	8
chr12	80926097	80926098	chunk0048_179_1	41.0929	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	80925907	80926309	-52349000	+	L2a	LINE	L2	2934	3409	-17	8
chr12	80968695	80968696	chunk0048_183_1	5.41601	AR_DHT_Control	chr12	80968571	80968788	-52306521	-	MER58A	DNA	hAT-Charlie	0	224	1	8
chr12	81023848	81023849	chunk0048_184_1	8.2753	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	81023747	81023871	-52251438	+	MIR	SINE	MIR	4	129	-133	8
chr12	81183708	81183709	chunk0048_196_1	22.85475	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	81183264	81187307	-52088002	+	L1MA9	LINE	L1	2878	7100	-233	8
chr12	81210054	81210055	chunk0048_199_1	7.06178	AR_DHT_Control	chr12	81209549	81210179	-52065130	-	MER41B	LTR	ERV1	0	634	1	8
chr12	81245633	81245634	chunk0048_200_1	31.0417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	81245614	81245885	-52029424	-	L1ME1	LINE	L1	-6233	275	1	8
chr12	81382266	81382267	chunk0048_205_1	132.0295	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	81381886	81383208	-51892101	-	L2a	LINE	L2	0	3426	1892	8
chr12	81395290	81395291	chunk0048_210_1	80.4793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	81395078	81395426	-51879883	+	L1M5	LINE	L1	4232	4606	-1540	8
chr12	81543197	81543198	chunk0048_231_1	18.935	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	81543131	81544236	-51731073	+	L1MC3	LINE	L1	6705	7785	0	8
chr12	81543739	81543740	chunk0048_232_1	13.1101	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	81543131	81544236	-51731073	+	L1MC3	LINE	L1	6705	7785	0	8
chr12	81571623	81571624	chunk0048_239_1	13.8636	AR_DHT_Control	chr12	81571449	81571665	-51703644	+	MIR	SINE	MIR	3	251	-11	8
chr12	81611444	81611445	chunk0048_248_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	81605846	81612173	-51663136	-	L1PA16	LINE	L1	-2	6501	2	8
chr12	81612136	81612137	chunk0048_249_1	17.0234	AR_DHT_Control	chr12	81605846	81612173	-51663136	-	L1PA16	LINE	L1	-2	6501	2	8
chr12	81738010	81738011	chunk0048_253_1	13.1346	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	81737675	81738500	-51536809	+	L1MEg	LINE	L1	937	1773	-4469	8
chr12	81984069	81984070	chunk0048_257_1	36.4097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	81982724	81984249	-51291060	+	L1MC1	LINE	L1	4338	5933	-400	8
chr12	81999620	81999621	chunk0048_260_1	222.9503	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	81999209	81999997	-51275312	+	ERV3-16A3_I-int	LTR	ERVL	4269	5046	-180	8
chr12	82009177	82009178	chunk0048_264_1	9.39801	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	82008653	82009425	-51265884	+	ERV3-16A3_I-int	LTR	ERVL	3916	4839	-828	8
chr12	82119631	82119632	chunk0048_267_1	8.80746	AR_DHT_Control	chr12	82119377	82120370	-51154939	-	L1PA16	LINE	L1	-8	6158	5133	8
chr12	82728917	82728918	chunk0048_289_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	82728587	82730158	-50545151	+	LTR12C	LTR	ERV1	2	1579	0	8
chr12	82756111	82756112	chunk0048_295_1	30.94197	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	82755970	82756122	-50519187	-	L1M4	LINE	L1	-2465	3681	3517	8
chr12	82757375	82757376	chunk0048_296_1	39.4109	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	82757367	82757518	-50517791	-	MIRc	SINE	MIR	-17	251	107	8
chr12	82789897	82789898	chunk0048_298_1	56.4417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	82789773	82789927	-50485382	-	MIRc	SINE	MIR	-11	251	100	8
chr12	82805312	82805313	chunk0048_301_1	15.7461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	82804878	82805466	-50469843	-	LTR10C	LTR	ERV1	0	591	1	8
chr12	83117047	83117048	chunk0048_314_1	12.22446	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	83116045	83117896	-50157413	-	L1PB1	LINE	L1	-128	6739	5107	8
chr12	83339408	83339409	chunk0048_321_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	83338590	83340027	-49935282	+	L1MA2	LINE	L1	15	1453	-6112	8
chr12	83806041	83806042	chunk0048_327_1	61.4723	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	83805878	83806323	-49468986	+	MLT1C	LTR	ERVL-MaLR	1	451	-16	8
chr12	83907765	83907766	chunk0048_334_1	20.19302	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	83907745	83907794	-49367515	+	L1PB4	LINE	L1	6107	6154	-2	8
chr12	84137512	84137513	chunk0048_337_1	6.0927	AR_DHT_Control	chr12	84136953	84137776	-49137533	-	L1ME1	LINE	L1	-112	6067	5206	8
chr12	85041607	85041608	chunk0048_351_1	22.374	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	85041236	85041984	-48233325	-	L2a	LINE	L2	0	3426	2518	9
chr12	85860935	85860936	chunk0048_364_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	85860787	85866628	-47408681	-	L1PA8A	LINE	L1	-640	5806	2	9
chr12	85948281	85948282	chunk0048_365_1	52.7128	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	85948214	85948672	-47326637	+	LTR40a	LTR	ERVL	16	504	-15	9
chr12	86265360	86265361	chunk0048_372_1	13.1988	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	86264931	86265361	-47009948	+	MER52A	LTR	ERV1	1331	1755	0	9
chr12	86349363	86349364	chunk0048_375_1	24.3937	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	86349190	86349513	-46925796	-	L1MEg	LINE	L1	-5550	1783	1489	9
chr12	86352554	86352555	chunk0048_376_1	5.34021	AR_DHT_Control	chr12	86352430	86352624	-46922685	-	L1ME4b	LINE	L1	-169	723	521	9
chr12	86357070	86357071	chunk0048_377_1	8.21385	AR_DHT_Control	chr12	86356355	86362494	-46912815	+	L1PA5	LINE	L1	4	6149	-5	9
chr12	86379546	86379547	chunk0048_379_1	24.95289	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	86379519	86379619	-46895690	+	L2a	LINE	L2	3320	3424	-2	9
chr12	86462858	86462859	chunk0048_380_1	19.933	AR_DHT_Control	chr12	86462468	86463010	-46812299	-	MLT2A2	LTR	ERVL	0	554	1	9
chr12	86498789	86498790	chunk0048_382_1	15.95971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	86498269	86499240	-46776069	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1033	-35	9
chr12	86877117	86877118	chunk0048_385_1	18.70334	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	86876690	86877184	-46398125	-	L1MA3	LINE	L1	-7060	505	16	9
chr12	87082938	87082939	chunk0048_386_1	14.1213	AR_DHT_Control	chr12	87082912	87083018	-46192291	-	MIR	SINE	MIR	-151	111	2	9
chr12	87146793	87146794	chunk0048_388_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	87145602	87147345	-46127964	-	L1PB1	LINE	L1	0	6867	5115	9
chr12	87215764	87215765	chunk0048_389_1	12.2633	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	87215764	87215865	-46059444	-	MIRb	SINE	MIR	-58	210	99	9
chr12	87319826	87319827	chunk0048_390_1	29.1154	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	87319662	87319893	-45955416	+	MIR	SINE	MIR	14	252	-10	9
chr12	87348311	87348312	chunk0048_392_1	24.1335	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	87348212	87348399	-45926910	+	L1ME3E	LINE	L1	5694	5870	-372	9
chr12	87713027	87713028	chunk0048_393_1	11.9063	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	87712451	87713788	-45561521	+	L1MC3	LINE	L1	5412	6793	-1167	9
chr12	87729109	87729110	chunk0048_395_1	14.04928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	87729102	87729222	-45546087	+	L1MC	LINE	L1	2658	2780	-3366	9
chr12	88238665	88238666	chunk0048_412_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	88238339	88239218	-45036091	-	L1M1	LINE	L1	-4964	2525	1992	9
chr12	88470323	88470324	chunk0048_433_1	34.9562	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	88470303	88470775	-44804534	-	L2a	LINE	L2	-1	3425	2919	9
chr12	88546691	88546692	chunk0048_439_1	36.3544	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	88546446	88546706	-44728603	+	L2a	LINE	L2	3143	3422	-4	9
chr12	88634189	88634190	chunk0048_445_1	42.28417	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	88633942	88634342	-44640967	-	LTR57	LTR	ERVL	-38	373	1	9
chr12	88635763	88635764	chunk0048_446_1	6.15258	AR_DHT_Control	chr12	88635094	88636251	-44639058	-	L1MC1	LINE	L1	-88	6245	4575	9
chr12	88684812	88684813	chunk0048_448_1	100.1154	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	88684548	88685105	-44590204	+	ERV3-16A3_I-int	LTR	ERVL	4472	5030	-196	9
chr12	88707159	88707160	chunk0048_449_1	21.0751	AR_DHT_Control	chr12	88705108	88708697	-44566612	-	L1PB4	LINE	L1	-1141	5705	1946	9
chr12	88723379	88723380	chunk0048_452_1	12.0211	AR_DHT_Control	chr12	88722971	88723475	-44551834	-	LTR37B	LTR	ERV1	0	468	15	9
chr12	88924397	88924398	chunk0048_458_1	35.60343	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	88924396	88924481	-44350828	-	MIRc	SINE	MIR	-98	170	89	9
chr12	88958362	88958363	chunk0048_461_1	20.69646	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	88958264	88958410	-44316899	-	Tigger19b	DNA	TcMar-Tigger	-340	210	59	9
chr12	89120191	89120192	chunk0048_463_1	9.1218	AR_DHT_Control	chr12	89119305	89120520	-44154789	+	L2c	LINE	L2	2158	3386	-1	9
chr12	89158873	89158874	chunk0049_1_1	7.57442	AR_DHT_Control	chr12	89158660	89158987	-44116322	+	Tigger18a	DNA	TcMar-Tigger	1	324	-528	9
chr12	89164169	89164170	chunk0049_3_1	17.34204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	89164151	89164235	-44111074	+	L2a	LINE	L2	3346	3426	0	9
chr12	89192570	89192571	chunk0049_5_1	46.2304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	89192391	89192583	-44082726	-	L2c	LINE	L2	-57	3330	3102	9
chr12	89262351	89262352	chunk0049_8_1	6.48643	AR_DHT_Control	chr12	89262166	89262382	-44012927	-	MER58A	DNA	hAT-Charlie	0	224	1	9
chr12	89290277	89290278	chunk0049_9_1	19.43008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	89290270	89290572	-43984737	-	AluSx1	SINE	Alu	-7	305	2	9
chr12	89301501	89301502	chunk0049_11_1	22.989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	89300485	89302206	-43973103	+	L1ME3B	LINE	L1	4421	6239	-3	9
chr12	89534037	89534038	chunk0049_23_1	7.80475	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	89533888	89534231	-43741078	-	MER1B	DNA	hAT-Charlie	-5	334	1	9
chr12	89645609	89645610	chunk0049_28_1	42.3534	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	89645352	89647073	-43628236	-	L2a	LINE	L2	-11	3415	1555	9
chr12	89660606	89660607	chunk0049_29_1	5.6503	AR_DHT_Control	chr12	89659945	89660620	-43614689	+	L3	LINE	CR1	2944	3587	-512	9
chr12	89676756	89676757	chunk0049_30_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	89676689	89676786	-43598523	-	UCON40	Unknown	Unknown	-142	173	76	9
chr12	89693804	89693805	chunk0049_31_1	11.9693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	89693661	89693902	-43581407	-	Tigger15a	DNA	TcMar-Tigger	-416	299	26	9
chr12	89757792	89757793	chunk0049_34_1	8.58634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	89757608	89758564	-43516745	+	L1PA16	LINE	L1	4814	5771	-395	9
chr12	89763015	89763016	chunk0049_36_1	26.13749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	89762928	89763041	-43512268	-	LTR88c	LTR	Gypsy?	-695	167	54	9
chr12	89770393	89770394	chunk0049_37_1	5.28628	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	89769141	89771604	-43503705	-	ERVL-B4-int	LTR	ERVL	-2052	3662	1244	9
chr12	89829198	89829199	chunk0049_40_1	18.6851	AR_DHT_Control	chr12	89829126	89830245	-43445064	-	L2	LINE	L2	-469	2950	1733	9
chr12	90027236	90027237	chunk0049_54_1	57.44404	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	90027087	90027553	-43247756	+	MLT1C	LTR	ERVL-MaLR	1	465	-2	9
chr12	90120217	90120218	chunk0049_60_1	15.76931	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	90119365	90123053	-43152256	-	L1MA4A	LINE	L1	-3390	4172	358	9
chr12	90180140	90180141	chunk0049_68_1	11.9693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	90179042	90180226	-43095083	-	L1ME3F	LINE	L1	-260	5983	4632	9
chr12	90284491	90284492	chunk0049_69_1	6.48643	AR_DHT_Control	chr12	90284411	90285001	-42990308	+	L1M7	LINE	L1	1252	1838	-5248	9
chr12	90305986	90305987	chunk0049_72_1	44.0241	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	90305941	90306062	-42969247	-	LTR78B	LTR	ERV1	-1164	132	3	9
chr12	90359845	90359846	chunk0049_75_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	90359807	90359852	-42915457	+	(AATGA)n	Simple_repeat	Simple_repeat	1	46	0	9
chr12	90449717	90449718	chunk0049_77_1	15.975	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	90449255	90450779	-42824530	-	L1MD1	LINE	L1	-1	6241	4631	9
chr12	90574779	90574780	chunk0049_78_1	19.3689	AR_DHT_Control	chr12	90570465	90576624	-42698685	-	L1MA3	LINE	L1	-1142	6423	98	9
chr12	90611228	90611229	chunk0049_79_1	15.702	AR_DHT_Control	chr12	90611176	90612077	-42663232	-	L1M4b	LINE	L1	-5983	884	11	9
chr12	90635330	90635331	chunk0049_81_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	90634719	90635677	-42639632	+	L1ME1	LINE	L1	3212	4186	-1960	9
chr12	90808802	90808803	chunk0049_89_1	9.50747	AR_DHT_Control	chr12	90808786	90808920	-42466389	+	MER91A	DNA	hAT-Tip100	53	196	0	9
chr12	90828672	90828673	chunk0049_92_1	4.70267	AR_DHT_Control	chr12	90828579	90828783	-42446526	-	MIRb	SINE	MIR	-56	212	3	9
chr12	90832684	90832685	chunk0049_93_1	5.9328	AR_DHT_Control	chr12	90832475	90833684	-42441625	-	L2	LINE	L2	-1736	1683	352	9
chr12	90858388	90858389	chunk0049_97_1	92.1609	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	90858097	90858689	-42416620	-	MER61F	LTR	ERV1	-37	639	7	9
chr12	90877943	90877944	chunk0049_100_1	284.18869	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr12	90874971	90880219	-42395090	+	HERVL-int	LTR	ERVL	1	5323	-331	9
chr12	90923630	90923631	chunk0049_103_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	90923367	90923712	-42351597	-	LTR16	LTR	ERVL	0	438	95	9
chr12	91299619	91299620	chunk0049_110_1	23.4097	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91298944	91302464	-41972845	+	L1PA10	LINE	L1	3982	7572	0	9
chr12	91348934	91348935	chunk0049_115_1	10.2513	AR_DHT_Control	chr12	91348515	91349015	-41926294	-	MER31B	LTR	ERV1	0	466	2	9
chr12	91441076	91441077	chunk0049_122_1	16.4902	AR_DHT_Control	chr12	91440957	91441314	-41833995	+	L1PA15	LINE	L1	5812	6165	0	9
chr12	91530052	91530053	chunk0049_124_1	23.5309	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91529894	91530328	-41744981	+	MLT1C	LTR	ERVL-MaLR	1	467	0	9
chr12	91591676	91591677	chunk0049_127_1	8.7059	AR_DHT_Control	chr12	91591472	91592185	-41683124	-	Tigger3b	DNA	TcMar-Tigger	0	1231	481	9
chr12	91638126	91638127	chunk0049_131_1	52.82201	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	91637944	91638191	-41637118	-	MER97a	DNA	hAT-Tip100	-641	249	5	9
chr12	91659291	91659292	chunk0049_134_1	38.09281	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91658798	91659733	-41615576	+	L2a	LINE	L2	2428	3426	0	9
chr12	91693404	91693405	chunk0049_136_1	12.6124	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91692503	91693430	-41581879	+	L2a	LINE	L2	2372	3426	0	9
chr12	91833717	91833718	chunk0049_142_1	7.69414	AR_DHT_Control	chr12	91833700	91833765	-41441544	+	MLT1H	LTR	ERVL-MaLR	123	186	-363	9
chr12	91915569	91915570	chunk0049_148_1	13.56714	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91915465	91915800	-41359509	+	L1MEd	LINE	L1	562	867	-6219	9
chr12	91927115	91927116	chunk0049_150_1	18.41304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	91927093	91927166	-41348143	+	AmnSINE1	SINE	5S-Deu-L2	414	486	-89	9
chr12	92043402	92043403	chunk0049_159_1	28.4669	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	92043305	92043435	-41231874	-	MIR3	SINE	MIR	-21	187	38	9
chr12	92070718	92070719	chunk0049_162_1	20.52117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	92070701	92070743	-41204566	+	MIRb	SINE	MIR	64	105	-163	9
chr12	92208567	92208568	chunk0049_167_1	22.72282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	92208518	92208687	-41066622	+	MER58A	DNA	hAT-Charlie	34	224	0	9
chr12	92244242	92244243	chunk0049_168_1	166.0263	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	92244076	92244261	-41031048	+	L2a	LINE	L2	3218	3399	-27	9
chr12	92349805	92349806	chunk0049_177_1	32.4849	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	92348644	92349857	-40925452	-	HAL1	LINE	L1	-1219	1288	2	9
chr12	92382514	92382515	chunk0049_178_1	9.07871	AR_DHT_Control	chr12	92382483	92382516	-40892793	-	L2a	LINE	L2	0	3387	3355	9
chr12	92564249	92564250	chunk0049_182_1	11.1388	AR_DHT_Control	chr12	92564219	92564260	-40711049	+	A-rich	Low_complexity	Low_complexity	1	42	0	9
chr12	92602980	92602981	chunk0049_183_1	6.6351	AR_DHT_Control	chr12	92602762	92603161	-40672148	-	L2c	LINE	L2	-11	3376	2910	9
chr12	92675057	92675058	chunk0049_184_1	5.86499	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	92674947	92675503	-40599806	+	MLT1F2	LTR	ERVL-MaLR	1	560	0	9
chr12	92723106	92723107	chunk0049_185_1	16.2208	AR_DHT_Control	chr12	92722930	92723170	-40552139	-	L2b	LINE	L2	-160	3215	2973	9
chr12	92991252	92991253	chunk0049_192_1	20.2171	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	92990899	92991367	-40283942	-	L1ME1	LINE	L1	-11	6168	5695	9
chr12	93019665	93019666	chunk0049_195_1	24.7881	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	93019136	93019733	-40255576	-	Tigger12c	DNA	TcMar-Tigger	-1	733	123	9
chr12	93087507	93087508	chunk0049_196_1	25.47813	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	93087352	93087565	-40187744	-	MER110	LTR	ERV1	-202	289	79	9
chr12	93146546	93146547	chunk0049_205_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	93146472	93146613	-40128696	+	MLT1H2	LTR	ERVL-MaLR	390	533	-16	9
chr12	93200446	93200447	chunk0049_211_1	35.8779	AR_DHT_Control	chr12	93200361	93200613	-40074696	-	LTR16E2	LTR	ERVL	-92	476	239	9
chr12	93226352	93226353	chunk0049_214_1	5.46037	AR_DHT_Control	chr12	93226026	93226371	-40048938	-	L1ME3Cz	LINE	L1	-270	727	356	9
chr12	93360201	93360202	chunk0049_217_1	5.99997	AR_DHT_Control	chr12	93360047	93360656	-39914653	+	L1ME2	LINE	L1	5616	6157	-7	9
chr12	93412542	93412543	chunk0049_222_1	17.37321	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	93412457	93413038	-39862271	-	LTR10C	LTR	ERV1	-2	589	7	9
chr12	93413025	93413026	chunk0049_223_1	9.6205	AR_DHT_Control	chr12	93412457	93413038	-39862271	-	LTR10C	LTR	ERV1	-2	589	7	9
chr12	93452011	93452012	chunk0049_231_1	88.8047	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	93451885	93452048	-39823261	+	L2c	LINE	L2	3185	3339	-36	9
chr12	93511949	93511950	chunk0049_237_1	183.8824	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	93510941	93512169	-39763140	+	Charlie10	DNA	hAT-Charlie	444	1705	-1117	9
chr12	93524626	93524627	chunk0049_239_1	7.42871	AR_DHT_Control	chr12	93524300	93524699	-39750610	+	L2b	LINE	L2	2984	3426	0	9
chr12	93552665	93552666	chunk0049_240_1	172.2495	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	93552655	93552714	-39722595	-	L2c	LINE	L2	-8	3367	3308	9
chr12	93586355	93586356	chunk0049_245_1	12.50047	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	93586128	93586536	-39688773	+	Tigger16a	DNA	TcMar-Tigger	550	952	-5	9
chr12	93653876	93653877	chunk0049_247_1	11.022	AR_DHT_Control	chr12	93653874	93654002	-39621307	+	LTR33A_	LTR	ERVL	32	165	-366	9
chr12	93704379	93704380	chunk0049_252_1	79.7984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	93704197	93704381	-39570928	+	MIR3	SINE	MIR	13	193	-15	9
chr12	93704379	93704380	chunk0049_252_1	79.7984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	93704343	93705221	-39570088	+	L2a	LINE	L2	2453	3426	0	9
chr12	93711653	93711654	chunk0049_254_1	55.34658	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	93711341	93711756	-39563553	+	L2b	LINE	L2	2737	3166	-209	9
chr12	93712304	93712305	chunk0049_256_1	35.2117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	93712264	93712464	-39562845	+	L2b	LINE	L2	3218	3426	0	9
chr12	93719699	93719700	chunk0049_257_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	93719058	93721106	-39554203	-	L1MC1	LINE	L1	-2093	4228	2145	9
chr12	93734907	93734908	chunk0049_261_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	93734496	93735154	-39540155	+	L2c	LINE	L2	2747	3386	-1	9
chr12	93749971	93749972	chunk0049_264_1	8.27376	AR_DHT_Control	chr12	93749918	93749977	-39525332	+	L2a	LINE	L2	3368	3426	0	9
chr12	93768764	93768765	chunk0049_267_1	21.83674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	93768678	93769078	-39506231	-	L1ME3A	LINE	L1	-8	6165	5767	9
chr12	93865676	93865677	chunk0049_279_1	12.0793	AR_DHT_Control	chr12	93865419	93865700	-39409609	-	AluJr4	SINE	Alu	-14	298	2	9
chr12	93898761	93898762	chunk0049_280_1	10.3842	AR_DHT_Control	chr12	93898703	93899333	-39375976	+	LTR39	LTR	ERV1	168	783	0	9
chr12	93934126	93934127	chunk0049_282_1	15.21762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	93933826	93934248	-39341061	+	LTR23	LTR	ERV1	1	432	-5	9
chr12	93943857	93943858	chunk0049_284_1	86.7346	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	93943820	93944282	-39331027	+	LTR33	LTR	ERVL	1	499	-16	9
chr12	94438606	94438607	chunk0049_302_1	66.0834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	94438241	94441633	-38833676	+	L1PB1	LINE	L1	2904	6314	-553	9
chr12	94555874	94555875	chunk0049_305_1	101.205	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	94555653	94556080	-38719229	+	L1MC4	LINE	L1	6667	7089	-953	9
chr12	94762623	94762624	chunk0049_329_1	8.16452	AR_DHT_Control	chr12	94761616	94762775	-38512534	+	Tigger3b	DNA	TcMar-Tigger	1	1229	-2	9
chr12	95075669	95075670	chunk0049_340_1	21.1421	AR_DHT_Control	chr12	95075493	95075852	-38199457	-	Tigger3a	DNA	TcMar-Tigger	-17	331	1	9
chr12	95243588	95243589	chunk0049_346_1	72.4159	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	95243548	95243620	-38031689	-	L1MC5a	LINE	L1	-165	2612	2543	9
chr12	95305316	95305317	chunk0049_350_1	20.71767	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	95305076	95305364	-37969945	-	Tigger15a	DNA	TcMar-Tigger	-285	430	105	9
chr12	95384045	95384046	chunk0049_353_1	4.09301	AR_DHT_Control	chr12	95383981	95384480	-37890829	+	LTR3B_	LTR	ERVK	1	499	0	9
chr12	95428560	95428561	chunk0049_355_1	12.55689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	95428464	95428884	-37846425	-	MSTB1	LTR	ERVL-MaLR	-2	430	2	9
chr12	95484812	95484813	chunk0049_358_1	21.91105	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	95484215	95484994	-37790315	+	L4_A_Mam	LINE	RTE-X	4107	4981	-9	9
chr12	95497190	95497191	chunk0049_359_1	13.8894	AR_DHT_Control	chr12	95497124	95497845	-37777464	-	L1MB3	LINE	L1	-51	6132	5343	9
chr12	95578934	95578935	chunk0049_363_1	101.1926	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	95578861	95578946	-37696363	+	L2b	LINE	L2	3303	3372	-3	9
chr12	95627101	95627102	chunk0049_366_1	101.402	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	95627101	95627165	-37648144	-	L3	LINE	CR1	-189	3910	3844	9
chr12	95836039	95836040	chunk0049_378_1	6.58746	AR_DHT_Control	chr12	95835990	95836053	-37439256	-	L1PA8	LINE	L1	-8	6164	6103	9
chr12	96046994	96046995	chunk0049_381_1	7.6291	AR_DHT_Control	chr12	96046814	96047326	-37227983	-	L1ME3A	LINE	L1	-8	6165	5667	9
chr12	96048549	96048550	chunk0049_384_1	20.93254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	96048422	96049053	-37226256	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	9
chr12	96064765	96064766	chunk0049_385_1	8.46955	AR_DHT_Control	chr12	96064531	96064924	-37210385	+	Tigger3c	DNA	TcMar-Tigger	219	602	0	9
chr12	96094616	96094617	chunk0049_386_1	9.56062	AR_DHT_Control	chr12	96094562	96094783	-37180526	+	MER20B	DNA	hAT-Charlie	540	776	-7	9
chr12	96101406	96101407	chunk0049_387_1	13.7322	AR_DHT_Control	chr12	96101327	96101643	-37173666	-	AluSz	SINE	Alu	-10	302	2	9
chr12	96452426	96452427	chunk0049_394_1	19.527	AR_DHT_Control	chr12	96451750	96453299	-36822010	+	L1PA17	LINE	L1	4392	5972	-194	9
chr12	96770428	96770429	chunk0049_396_1	42.25519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	96770233	96770553	-36504756	+	L1M6	LINE	L1	614	959	-5537	9
chr12	96810243	96810244	chunk0049_399_1	60.59396	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	96808910	96810427	-36464882	-	HAL1	LINE	L1	-835	1672	29	9
chr12	97368348	97368349	chunk0049_412_1	4.19326	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	97367932	97368395	-35906914	-	MLT1H	LTR	ERVL-MaLR	-12	477	7	9
chr12	97369146	97369147	chunk0049_413_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	97368952	97369288	-35906021	+	LTR41B	LTR	ERVL	389	756	-2	9
chr12	97449641	97449642	chunk0049_417_1	16.88683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	97449218	97449706	-35825603	+	L2c	LINE	L2	885	1409	-2010	9
chr12	97694725	97694726	chunk0049_421_1	32.2018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	97691324	97697438	-35577871	-	L1PA5	LINE	L1	-14	6140	4	9
chr12	97695312	97695313	chunk0049_422_1	6.22495	AR_DHT_Control	chr12	97691324	97697438	-35577871	-	L1PA5	LINE	L1	-14	6140	4	9
chr12	97857083	97857084	chunk0049_424_1	275.7271	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	97856978	97857912	-35417397	+	L1MA6	LINE	L1	3236	4190	-2655	9
chr12	97939340	97939341	chunk0049_430_1	20.0022	AR_DHT_Control	chr12	97939295	97939342	-35335967	+	MIR	SINE	MIR	216	262	0	9
chr12	97946505	97946506	chunk0049_431_1	9.28153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	97945943	97946805	-35328504	-	L3	LINE	CR1	-657	3442	2581	9
chr12	97947411	97947412	chunk0049_432_1	16.5229	AR_DHT_Control	chr12	97946930	97947515	-35327794	-	L2a	LINE	L2	0	3426	2776	9
chr12	98265145	98265146	chunk0049_435_1	16.4778	AR_DHT_Control	chr12	98265099	98265211	-35010098	+	L2b	LINE	L2	3249	3381	-6	9
chr12	98445418	98445419	chunk0049_439_1	13.9693	AR_DHT_Control	chr12	98445397	98445508	-34829801	+	MLT2B1	LTR	ERVL	1	120	-400	9
chr12	98701364	98701365	chunk0049_443_1	126.76163	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	98701235	98701609	-34573700	-	L1MB4	LINE	L1	-396	5784	5392	9
chr12	99063383	99063384	chunk0050_2_1	19.64338	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	99063365	99063615	-34211694	+	MamRTE1	LINE	RTE-BovB	3095	3386	-426	9
chr12	99553583	99553584	chunk0050_6_1	104.1186	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	99553490	99553679	-33721630	-	MER58A	DNA	hAT-Charlie	-24	200	7	9
chr12	99580483	99580484	chunk0050_7_1	12.738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	99580458	99580896	-33694413	+	L1MA4	LINE	L1	5852	6300	0	9
chr12	99732287	99732288	chunk0050_20_1	161.0663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	99731542	99732742	-33542567	+	L1ME1	LINE	L1	4860	6158	-21	9
chr12	99884431	99884432	chunk0050_22_1	14.00179	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	99884138	99884895	-33390414	+	L1ME1	LINE	L1	5769	6547	-30	9
chr12	99957915	99957916	chunk0050_27_1	39.77564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	99957847	99958308	-33317001	-	L2c	LINE	L2	0	3426	2915	9
chr12	100230138	100230139	chunk0050_35_1	6.23615	AR_DHT_Control	chr12	100230063	100230235	-33045074	+	HAL1ME	LINE	L1	1651	1826	-639	9
chr12	100463174	100463175	chunk0050_36_1	19.81061	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	100463112	100463405	-32811904	-	L2c	LINE	L2	-1	3425	3134	9
chr12	100605966	100605967	chunk0050_42_1	11.1604	AR_DHT_Control	chr12	100602506	100606998	-32668311	-	L1MA2	LINE	L1	-7	7716	3031	9
chr12	100609505	100609506	chunk0050_43_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	100609376	100609515	-32665794	-	L1M1	LINE	L1	-7196	369	221	9
chr12	100609505	100609506	chunk0050_43_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	100609488	100610126	-32665183	-	L1MA2	LINE	L1	-6904	661	16	9
chr12	100630435	100630436	chunk0050_44_1	21.1579	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	100630430	100630491	-32644818	+	L2b	LINE	L2	3314	3375	0	9
chr12	100849564	100849565	chunk0050_46_1	12.4926	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	100849472	100849824	-32425485	-	L1ME4b	LINE	L1	-221	671	299	9
chr12	101078323	101078324	chunk0050_54_1	10.8721	AR_DHT_Control	chr12	101078308	101078363	-32196946	+	(GT)n	Simple_repeat	Simple_repeat	1	55	0	9
chr12	101141340	101141341	chunk0050_58_1	6.48643	AR_DHT_Control	chr12	101141210	101141436	-32133873	-	LTR79	LTR	ERVL	-301	226	3	9
chr12	101268896	101268897	chunk0050_62_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	101268576	101269407	-32005902	-	L1MC2	LINE	L1	-265	6079	5186	9
chr12	101459997	101459998	chunk0050_68_1	33.72416	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	101459680	101460109	-31815200	+	LTR33	LTR	ERVL	18	491	-24	9
chr12	101712066	101712067	chunk0050_83_1	8.41452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	101712020	101712318	-31562991	-	AluJb	SINE	Alu	-10	302	3	9
chr12	101713503	101713504	chunk0050_84_1	17.80746	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	101712325	101713727	-31561582	-	L1MEc	LINE	L1	-4939	1461	37	9
chr12	101839176	101839177	chunk0050_92_1	7.36432	AR_DHT_Control	chr12	101839036	101839289	-31436020	-	LTR41B	LTR	ERVL	-341	417	163	9
chr12	101995853	101995854	chunk0050_109_1	31.48742	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	101995829	101996015	-31279294	+	L2c	LINE	L2	3225	3408	-18	9
chr12	102015799	102015800	chunk0050_111_1	67.81632	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	102015769	102015869	-31259440	+	Tigger3c	DNA	TcMar-Tigger	1	102	-500	9
chr12	102200409	102200410	chunk0050_129_1	56.8589	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	102199804	102200958	-31074351	-	L1ME3G	LINE	L1	-1553	4593	3383	9
chr12	102394393	102394394	chunk0050_134_1	16.4086	AR_DHT_Control	chr12	102394213	102394460	-30880849	+	MIRb	SINE	MIR	13	259	-9	9
chr12	102585180	102585181	chunk0050_144_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	102585101	102585244	-30690065	+	L1PA13	LINE	L1	6022	6163	0	9
chr12	102646194	102646195	chunk0050_147_1	8.82835	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	102646184	102646214	-30629095	+	L2c	LINE	L2	3358	3387	0	9
chr12	102694452	102694453	chunk0050_148_1	64.5288	AR_DHT_Control	chr12	102693473	102697025	-30578284	+	L1MA2	LINE	L1	22	3634	-4012	9
chr12	102892599	102892600	chunk0050_151_1	8.90544	AR_DHT_Control	chr12	102892415	102893117	-30382192	+	L1MC2	LINE	L1	5624	6333	-11	9
chr12	102924723	102924724	chunk0050_154_1	7.90337	AR_DHT_Control	chr12	102924625	102924873	-30350436	+	LTR40b	LTR	ERVL	120	351	-233	9
chr12	103161780	103161781	chunk0050_155_1	9.56998	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	103161747	103161865	-30113444	-	UCON8	DNA	DNA	-205	910	797	9
chr12	103828010	103828011	chunk0050_171_1	7.86105	AR_DHT_Control	chr12	103827963	103828117	-29447192	+	L3	LINE	CR1	3519	3678	-421	9
chr12	103839216	103839217	chunk0050_173_1	53.83675	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	103838503	103839248	-29436061	+	L1MD2	LINE	L1	5569	6294	-65	9
chr12	103849011	103849012	chunk0050_175_1	7.35925	AR_DHT_Control	chr12	103848726	103849025	-29426284	+	LTR84b	LTR	ERVL	270	567	-194	9
chr12	103994616	103994617	chunk0050_193_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	103994591	103995720	-29279589	+	L2b	LINE	L2	2144	3372	-3	9
chr12	104056816	104056817	chunk0050_194_1	34.40882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	104056596	104057235	-29218074	+	Tigger6a	DNA	TcMar-Tigger	5	676	-407	9
chr12	104090874	104090875	chunk0050_198_1	42.46102	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	104089611	104091599	-29183710	-	HAL1	LINE	L1	-241	2266	10	9
chr12	104343129	104343130	chunk0050_213_1	8.62865	AR_DHT_Control	chr12	104343099	104343303	-28932006	-	MIR	SINE	MIR	-19	243	31	9
chr12	104487567	104487568	chunk0050_215_1	9.22937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	104487560	104487665	-28787644	-	MIRb	SINE	MIR	-67	201	86	9
chr12	104677936	104677937	chunk0050_220_1	8.09329	AR_DHT_Control	chr12	104677806	104678153	-28597156	+	L2a	LINE	L2	2921	3316	-110	9
chr12	104727626	104727627	chunk0050_221_1	28.8511	AR_DHT_Control	chr12	104727578	104727630	-28547679	+	L2c	LINE	L2	3335	3387	0	9
chr12	104771284	104771285	chunk0050_224_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	104770622	104772179	-28503130	-	L1MEc	LINE	L1	-2387	3932	2381	9
chr12	104895544	104895545	chunk0050_226_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	104895518	104895820	-28379489	+	Charlie13b	DNA	hAT-Charlie	59	385	-127	9
chr12	104957093	104957094	chunk0050_229_1	5.96639	AR_DHT_Control	chr12	104956706	104957546	-28317763	+	L1MB7	LINE	L1	5293	6184	0	9
chr12	105001317	105001318	chunk0050_230_1	24.0675	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	105000632	105001484	-28273825	-	MER57A-int	LTR	ERV1	-1579	4608	3920	9
chr12	105003736	105003737	chunk0050_231_1	40.2388	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	105003660	105004060	-28271249	-	MER57D	LTR	ERV1	-9	402	1	9
chr12	105077741	105077742	chunk0050_233_1	17.54147	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	105077739	105077758	-28197551	+	(A)n	Simple_repeat	Simple_repeat	1	19	0	9
chr12	105182435	105182436	chunk0050_235_1	42.3491	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	105182328	105185703	-28089606	-	L1PA7	LINE	L1	-3063	3398	8	9
chr12	105215505	105215506	chunk0050_238_1	21.01106	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	105215473	105215553	-28059756	+	L2a	LINE	L2	3345	3424	-2	9
chr12	105233195	105233196	chunk0050_240_1	10.3736	AR_DHT_Control	chr12	105233175	105233274	-28042035	+	L2c	LINE	L2	3243	3347	-40	9
chr12	105270179	105270180	chunk0050_241_1	21.77002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	105269857	105270232	-28005077	+	Tigger16a	DNA	TcMar-Tigger	535	947	-10	9
chr12	105274617	105274618	chunk0050_243_1	5.14476	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	105274524	105274856	-28000453	-	MamGypLTR3a	LTR	Gypsy	-195	786	456	9
chr12	105353079	105353080	chunk0050_244_1	19.57635	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	105353069	105353608	-27921701	-	MLT1K	LTR	ERVL-MaLR	-7	588	16	9
chr12	105454978	105454979	chunk0050_249_1	13.5024	AR_DHT_Control	chr12	105454813	105455069	-27820240	+	MLT1A1	LTR	ERVL-MaLR	1	275	-133	9
chr12	105594912	105594913	chunk0050_251_1	8.26412	AR_DHT_Control	chr12	105594674	105595193	-27680116	+	L2b	LINE	L2	2900	3375	0	9
chr12	105733789	105733790	chunk0050_252_1	8.57499	AR_DHT_Control	chr12	105733727	105733948	-27541361	+	MER58A	DNA	hAT-Charlie	1	224	0	9
chr12	105856092	105856093	chunk0050_259_1	49.37498	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	105856068	105856111	-27419198	-	MER53	DNA	hAT	-150	43	1	9
chr12	105908004	105908005	chunk0050_260_1	12.7844	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	105907891	105909677	-27365632	+	ERV3-16A3_I-int	LTR	ERVL	2196	4041	-1185	9
chr12	106205518	106205519	chunk0050_272_1	38.68623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	106205185	106205625	-27069684	-	LTR16C	LTR	ERVL	0	489	2	9
chr12	106241221	106241222	chunk0050_274_1	15.54995	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	106241116	106241228	-27034081	+	L1MC5a	LINE	L1	2424	2541	-236	9
chr12	106291523	106291524	chunk0050_276_1	12.7341	AR_DHT_Control	chr12	106291195	106291573	-26983736	+	Tigger3c	DNA	TcMar-Tigger	1	602	0	9
chr12	106404688	106404689	chunk0050_285_1	16.07568	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	106404392	106405444	-26869865	-	L1ME2	LINE	L1	-918	5526	4442	9
chr12	106759059	106759060	chunk0050_294_1	6.26417	AR_DHT_Control	chr12	106758958	106759409	-26515900	-	L2b	LINE	L2	-5	3370	2924	9
chr12	106793833	106793834	chunk0050_304_1	18.5706	AR_DHT_Control	chr12	106792815	106795261	-26480048	+	L1MB7	LINE	L1	179	2829	-4038	9
chr12	106895260	106895261	chunk0050_308_1	7.27655	AR_DHT_Control	chr12	106894648	106895336	-26379973	+	Tigger3b	DNA	TcMar-Tigger	556	1231	0	9
chr12	107043438	107043439	chunk0050_311_1	8.68286	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	107042606	107044601	-26230708	+	L1M2a	LINE	L1	411	2381	-5185	9
chr12	107058185	107058186	chunk0050_315_1	15.43368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	107058083	107058821	-26216488	+	L3	LINE	CR1	2240	3124	-975	9
chr12	107079673	107079674	chunk0050_316_1	27.46342	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	107079566	107079753	-26195556	+	L2b	LINE	L2	2943	3131	-244	9
chr12	107114991	107114992	chunk0050_320_1	29.02643	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	107114879	107115177	-26160132	+	LTR82B	LTR	ERVL	505	828	-2	9
chr12	107159574	107159575	chunk0050_325_1	156.0316	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	107159422	107159587	-26115722	-	MLT1J2	LTR	ERVL-MaLR	-3	445	262	9
chr12	107176019	107176020	chunk0050_326_1	37.9643	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	107175946	107176153	-26099156	-	L2a	LINE	L2	-36	3390	3190	9
chr12	107288811	107288812	chunk0050_330_1	64.1759	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	107288715	107288891	-25986418	-	MIRc	SINE	MIR	-79	189	1	9
chr12	107450699	107450700	chunk0050_335_1	11.7184	AR_DHT_Control	chr12	107450266	107450814	-25824495	-	LTR29	LTR	ERV1	-24	598	79	9
chr12	107493760	107493761	chunk0050_341_1	52.09281	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	107493565	107494023	-25781286	+	MLT1C	LTR	ERVL-MaLR	1	467	0	9
chr12	107525504	107525505	chunk0050_344_1	8.62581	AR_DHT_Control	chr12	107525354	107525652	-25749657	+	Tigger3a	DNA	TcMar-Tigger	79	341	-7	9
chr12	107605037	107605038	chunk0050_345_1	24.3785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	107604437	107605041	-25670268	+	L1MA8	LINE	L1	5317	5920	-371	9
chr12	107605037	107605038	chunk0050_345_1	24.3785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	107605035	107605161	-25670148	+	L1MA8	LINE	L1	6146	6285	-6	9
chr12	107764855	107764856	chunk0050_353_1	8.79124	AR_DHT_Control	chr12	107764791	107765159	-25510150	-	Tigger3a	DNA	TcMar-Tigger	-16	332	1	9
chr12	107798535	107798536	chunk0050_359_1	7.53305	AR_DHT_Control	chr12	107798047	107798955	-25476354	+	L1MA6	LINE	L1	5206	6096	-204	9
chr12	107892332	107892333	chunk0050_361_1	8.41215	AR_DHT_Control	chr12	107892162	107892388	-25382921	+	MIRb	SINE	MIR	5	246	-22	9
chr12	107941787	107941788	chunk0050_366_1	45.37403	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	107941095	107947422	-25327887	+	L1MA4	LINE	L1	1238	7616	-103	9
chr12	108278561	108278562	chunk0050_369_1	12.6499	AR_DHT_Control	chr12	108278304	108278741	-24996568	+	MLT1L	LTR	ERVL-MaLR	133	610	0	9
chr12	108538491	108538492	chunk0050_370_1	23.36354	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	108538468	108538695	-24736614	+	L1MC5	LINE	L1	9075	9304	0	9
chr12	108639535	108639536	chunk0050_377_1	3.99562	AR_DHT_Control	chr12	108639356	108639594	-24635715	-	L2a	LINE	L2	0	3426	3104	9
chr12	108665669	108665670	chunk0050_378_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	108665546	108665738	-24609571	+	MIRb	SINE	MIR	8	236	-32	9
chr12	108716925	108716926	chunk0050_380_1	5.60881	AR_DHT_Control	chr12	108716875	108717572	-24557737	-	L2b	LINE	L2	0	3375	2677	9
chr12	108731556	108731557	chunk0050_381_1	5.47663	AR_DHT_Control	chr12	108731548	108731596	-24543713	+	(CCGCCC)n	Simple_repeat	Simple_repeat	1	48	0	9
chr12	108738151	108738152	chunk0050_382_1	59.6466	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	108737998	108738483	-24536826	-	L1MD1	LINE	L1	-1761	4776	4381	9
chr12	108926810	108926811	chunk0050_384_1	120.23058	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	108926604	108926827	-24348482	+	LTR37A	LTR	ERV1	78	321	-105	9
chr12	109386266	109386267	chunk0050_402_1	5.77445	AR_DHT_Control	chr12	109385883	109386988	-23888321	-	L1ME2	LINE	L1	-2	6162	4993	9
chr12	109482962	109482963	chunk0050_405_1	7.24914	AR_DHT_Control	chr12	109482816	109482985	-23792324	+	Charlie18a	DNA	hAT-Charlie	26	198	-144	9
chr12	109564342	109564343	chunk0050_406_1	8.35991	AR_DHT_Control	chr12	109564289	109564379	-23710930	-	MIRb	SINE	MIR	-64	204	125	9
chr12	109625057	109625058	chunk0050_408_1	6.06878	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	109625028	109625064	-23650245	+	(CTGCTGT)n	Simple_repeat	Simple_repeat	1	40	0	9
chr12	109682551	109682552	chunk0050_409_1	95.6019	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	109682333	109682598	-23592711	-	L1MC3	LINE	L1	-568	7217	6948	9
chr12	109716935	109716936	chunk0050_413_1	8.76364	AR_DHT_Control	chr12	109716862	109717048	-23558261	-	MIRb	SINE	MIR	-46	222	21	9
chr12	109886062	109886063	chunk0050_418_1	43.8032	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	109885918	109886089	-23389220	-	L1MC4	LINE	L1	-650	7392	7194	9
chr12	109940675	109940676	chunk0050_420_1	4.67225	AR_DHT_Control	chr12	109940597	109940880	-23334429	+	AluSz	SINE	Alu	1	284	-28	9
chr12	109972099	109972100	chunk0050_423_1	10.1791	AR_DHT_Control	chr12	109972011	109972471	-23302838	-	L1MEf	LINE	L1	-1830	4714	4245	9
chr12	109983026	109983027	chunk0050_424_1	9.08241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	109982945	109983030	-23292279	-	L1ME2z	LINE	L1	-63	6381	6300	9
chr12	110034485	110034486	chunk0050_427_1	6.94497	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	110034462	110034599	-23240710	-	FAM	SINE	Alu	-42	143	2	9
chr12	110306595	110306596	chunk0050_434_1	34.82141	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	110306346	110306736	-22968573	-	L1PA17	LINE	L1	-4	6162	5780	9
chr12	110488984	110488985	chunk0050_444_1	22.76021	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	110488945	110489021	-22786288	-	MIRc	SINE	MIR	-58	210	134	9
chr12	110681494	110681495	chunk0050_451_1	14.2268	AR_DHT_Control	chr12	110681296	110681516	-22593793	-	L1ME4c	LINE	L1	-400	430	202	9
chr12	110790506	110790507	chunk0050_453_1	76.692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	110790164	110790665	-22484644	-	L1ME3E	LINE	L1	-158	6084	5552	9
chr12	110984093	110984094	chunk0050_455_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	110984080	110984390	-22290919	-	AluJb	SINE	Alu	0	312	1	9
chr12	111031683	111031684	chunk0050_457_1	51.52261	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	111031110	111031768	-22243541	-	L1MC4	LINE	L1	0	8042	7386	9
chr12	111071234	111071235	chunk0050_460_1	25.95989	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111070468	111072346	-22202963	-	L1MC1	LINE	L1	-17	6316	4421	9
chr12	111238141	111238142	chunk0051_7_1	44.6499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	111238064	111238356	-22036953	+	L2b	LINE	L2	3093	3372	-3	9
chr12	111495791	111495792	chunk0051_8_1	8.27376	AR_DHT_Control	chr12	111495327	111495866	-21779443	+	L1M1	LINE	L1	3633	4183	-3382	9
chr12	111503397	111503398	chunk0051_9_1	18.27473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111503283	111503493	-21771816	+	MIR	SINE	MIR	23	248	-14	9
chr12	111560390	111560391	chunk0051_14_1	105.5995	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111560250	111560454	-21714855	+	MER2	DNA	TcMar-Tigger	135	344	-1	9
chr12	111579179	111579180	chunk0051_15_1	25.64461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111579046	111579260	-21696049	+	L1ME1	LINE	L1	5441	5705	-474	9
chr12	111758215	111758216	chunk0051_17_1	15.84802	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111758135	111758263	-21517046	-	L2a	LINE	L2	-2	3424	3297	9
chr12	111817133	111817134	chunk0051_22_1	31.56991	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	111816598	111818873	-21456436	-	HERVK3-int	LTR	ERVK	-2	7200	4914	9
chr12	111857197	111857198	chunk0051_25_1	24.1228	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111856934	111857232	-21418077	-	L1M4a1	LINE	L1	-250	2329	1961	9
chr12	111924695	111924696	chunk0051_28_1	18.04025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	111924395	111925203	-21350106	+	L1MC2	LINE	L1	5435	6295	-49	9
chr12	112018815	112018816	chunk0051_31_1	30.48222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	112018599	112019166	-21256143	+	L1MB5	LINE	L1	5580	6167	-7	9
chr12	112046185	112046186	chunk0051_32_1	59.2018	AR_DHT_Control	chr12	112045982	112046514	-21228795	+	MER68B	LTR	ERVL	1	564	0	9
chr12	112232426	112232427	chunk0051_37_1	18.5294	AR_DHT_Control	chr12	112232127	112232429	-21042880	-	AluSx1	SINE	Alu	-9	303	1	9
chr12	112335770	112335771	chunk0051_48_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	112335697	112335826	-20939483	+	L1PB1	LINE	L1	6028	6149	-2	9
chr12	112356914	112356915	chunk0051_50_1	12.7341	AR_DHT_Control	chr12	112356906	112357005	-20918304	-	MER5C1	DNA	hAT-Charlie	-149	114	1	9
chr12	112365043	112365044	chunk0051_51_1	9.08241	AR_DHT_Control	chr12	112364911	112365075	-20910234	-	MER58A	DNA	hAT-Charlie	-48	176	2	9
chr12	112375285	112375286	chunk0051_56_1	9.50747	AR_DHT_Control	chr12	112374906	112375377	-20899932	-	L1ME1	LINE	L1	-15	6164	5673	9
chr12	112466337	112466338	chunk0051_60_1	52.2996	AR_DHT_Control	chr12	112465967	112466387	-20808922	-	L2a	LINE	L2	-1	3425	2974	9
chr12	112884475	112884476	chunk0051_64_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	112884163	112884490	-20390819	-	L1ME3Cz	LINE	L1	-14	983	661	9
chr12	113018020	113018021	chunk0051_66_1	69.57749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	113017992	113018071	-20257238	-	L2	LINE	L2	-1085	2334	2261	9
chr12	113259999	113260000	chunk0051_74_1	4.06817	AR_DHT_Control	chr12	113259926	113260174	-20015135	-	L1MC4a	LINE	L1	-1829	6053	5867	9
chr12	113782073	113782074	chunk0051_78_1	12.3853	AR_DHT_Control	chr12	113781923	113782137	-19493172	+	MER58A	DNA	hAT-Charlie	1	214	-10	9
chr12	113865363	113865364	chunk0051_81_1	8.02791	AR_DHT_Control	chr12	113865033	113865574	-19409735	+	L2a	LINE	L2	2836	3426	0	9
chr12	114028422	114028423	chunk0051_83_1	11.8254	AR_DHT_Control	chr12	114028012	114028457	-19246852	-	LTR40a	LTR	ERVL	-82	437	1	9
chr12	114274507	114274508	chunk0051_84_1	16.9867	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	114274503	114274823	-19000486	-	MSTB1	LTR	ERVL-MaLR	0	432	1	9
chr12	114853751	114853752	chunk0051_102_1	6.5005	AR_DHT_Control	chr12	114853671	114853825	-18421484	+	Tigger9b	DNA	TcMar-Tigger	469	624	0	9
chr12	114891343	114891344	chunk0051_103_1	5.40815	AR_DHT_Control	chr12	114891180	114891348	-18383961	-	MIR	SINE	MIR	-1	261	73	9
chr12	114911447	114911448	chunk0051_105_1	92.14206	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	114911384	114911578	-18363731	+	MER58A	DNA	hAT-Charlie	26	224	0	9
chr12	115204313	115204314	chunk0051_117_1	19.60126	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	115204191	115204435	-18070874	+	L1ME4a	LINE	L1	5746	6046	-78	9
chr12	115269399	115269400	chunk0051_119_1	113.8005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	115269328	115269523	-18005786	+	MER58A	DNA	hAT-Charlie	20	224	0	9
chr12	115422063	115422064	chunk0051_127_1	13.5394	AR_DHT_Control	chr12	115422024	115422872	-17852437	+	L2a	LINE	L2	2497	3413	-13	9
chr12	115473441	115473442	chunk0051_128_1	14.45142	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	115473396	115473556	-17801753	-	MER5A1	DNA	hAT-Charlie	-5	161	1	9
chr12	115492020	115492021	chunk0051_132_1	76.7131	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	115492004	115492206	-17783103	-	L2c	LINE	L2	0	3387	3192	9
chr12	115693125	115693126	chunk0051_139_1	40.86939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	115693100	115693158	-17582151	-	MIR	SINE	MIR	-171	91	35	9
chr12	115714151	115714152	chunk0051_140_1	6.6351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	115714062	115714155	-17561154	+	Charlie18a	DNA	hAT-Charlie	193	289	-53	9
chr12	115830128	115830129	chunk0051_154_1	253.5672	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	115829826	115830465	-17444844	-	L1MC1	LINE	L1	-261	6072	5434	9
chr12	115835630	115835631	chunk0051_155_1	53.449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	115835460	115835633	-17439676	+	L2a	LINE	L2	2935	3124	-302	9
chr12	115858188	115858189	chunk0051_157_1	67.56321	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	115857901	115858440	-17416869	+	L2a	LINE	L2	2795	3410	-16	9
chr12	115872884	115872885	chunk0051_160_1	6.57411	AR_DHT_Control	chr12	115872761	115872967	-17402342	-	MIRb	SINE	MIR	-25	243	20	9
chr12	115915457	115915458	chunk0051_162_1	32.6913	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	115915328	115915471	-17359838	-	MIR	SINE	MIR	-23	239	98	9
chr12	116027397	116027398	chunk0051_170_1	7.37742	AR_DHT_Control	chr12	116027141	116027420	-17247889	+	AluJb	SINE	Alu	2	283	-29	9
chr12	116078660	116078661	chunk0051_172_1	39.1828	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	116078542	116078765	-17196544	+	MER58A	DNA	hAT-Charlie	1	223	-1	9
chr12	116080862	116080863	chunk0051_174_1	8.94637	AR_DHT_Control	chr12	116080464	116080986	-17194323	+	MER119	DNA	hAT-Charlie	5	583	0	9
chr12	116160466	116160467	chunk0051_184_1	76.21731	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	116160456	116160571	-17114738	+	MIR3	SINE	MIR	41	160	-48	9
chr12	116177160	116177161	chunk0051_187_1	41.9206	AR_DHT_Control	chr12	116177031	116177317	-17097992	-	L1ME3A	LINE	L1	-9	6164	5912	9
chr12	116257392	116257393	chunk0051_191_1	9.93187	AR_DHT_Control	chr12	116257333	116257638	-17017671	+	MLT1J	LTR	ERVL-MaLR	83	435	-77	9
chr12	116405510	116405511	chunk0051_202_1	113.6496	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	116405295	116405572	-16869737	+	Tigger6b	DNA	TcMar-Tigger	1066	1349	-248	9
chr12	116415255	116415256	chunk0051_205_1	11.92367	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	116414987	116415809	-16859500	+	(GT)n	Simple_repeat	Simple_repeat	1	832	0	9
chr12	116495485	116495486	chunk0051_206_1	33.44984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	116495320	116495616	-16779693	-	MLT1F1	LTR	ERVL-MaLR	-265	304	1	9
chr12	116509621	116509622	chunk0051_209_1	69.5935	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	116509596	116509678	-16765631	-	MER96B	DNA	hAT-Tip100	-10	407	325	9
chr12	116931532	116931533	chunk0051_231_1	32.67821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	116931047	116932149	-16343160	-	L1MA8	LINE	L1	-1155	4988	3838	9
chr12	116972792	116972793	chunk0051_232_1	4.63256	AR_DHT_Control	chr12	116972630	116973800	-16301509	+	L1MC4	LINE	L1	6472	7720	-322	9
chr12	116980220	116980221	chunk0051_233_1	11.3974	AR_DHT_Control	chr12	116979959	116980409	-16294900	+	MLT1O	LTR	ERVL-MaLR	75	524	-18	9
chr12	117060317	117060318	chunk0051_241_1	37.89524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	117060195	117060366	-16214943	+	L1ME3A	LINE	L1	5888	6061	-112	9
chr12	117079720	117079721	chunk0051_243_1	16.6648	AR_DHT_Control	chr12	117079579	117079915	-16195394	+	L1MB8	LINE	L1	5855	6178	0	9
chr12	117166430	117166431	chunk0051_248_1	6.48643	AR_DHT_Control	chr12	117166215	117166524	-16108785	+	L1MC1	LINE	L1	6003	6333	0	9
chr12	117393947	117393948	chunk0051_252_1	27.7549	AR_DHT_Control	chr12	117393621	117394046	-15881263	-	L2b	LINE	L2	-269	3118	2650	9
chr12	117507682	117507683	chunk0051_254_1	26.26866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	117507664	117507818	-15767491	-	MamRep434	DNA	TcMar-Tigger	-256	170	23	9
chr12	117519061	117519062	chunk0051_255_1	159.2642	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	117518632	117519119	-15756190	+	L2a	LINE	L2	2839	3417	-9	9
chr12	117527716	117527717	chunk0051_258_1	116.09975	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	117527604	117527732	-15747577	-	L2a	LINE	L2	0	3426	3295	9
chr12	117699542	117699543	chunk0051_263_1	10.802	AR_DHT_Control	chr12	117699354	117699872	-15575437	-	Tigger3c	DNA	TcMar-Tigger	-3	599	78	9
chr12	117861183	117861184	chunk0051_268_1	15.39021	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	117861018	117861290	-15414019	+	L1ME4b	LINE	L1	353	629	-263	9
chr12	118056466	118056467	chunk0051_271_1	18.16764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	118055912	118056580	-15218729	+	L2b	LINE	L2	2577	3375	0	9
chr12	118098563	118098564	chunk0051_275_1	17.67576	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	118098474	118098763	-15176546	-	L2b	LINE	L2	-34	3341	3037	9
chr12	118115996	118115997	chunk0051_278_1	14.63091	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	118115813	118116310	-15158999	-	MER50	LTR	ERV1	-161	621	1	9
chr12	118228058	118228059	chunk0051_281_1	68.2139	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	118227966	118228153	-15047156	-	L1ME3Cz	LINE	L1	-43	954	721	9
chr12	118228821	118228822	chunk0051_283_1	39.34323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	118228451	118228922	-15046387	-	L1ME3Cz	LINE	L1	-277	720	74	9
chr12	118264267	118264268	chunk0051_286_1	23.51452	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	118264070	118264723	-15010586	+	L1ME1	LINE	L1	5616	6315	-37	9
chr12	118560159	118560160	chunk0051_297_1	9.74833	AR_DHT_Control	chr12	118560107	118560352	-14714957	-	MLT1L	LTR	ERVL-MaLR	-345	265	2	9
chr12	118568351	118568352	chunk0051_299_1	134.8338	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	118568286	118568422	-14706887	-	L1ME3	LINE	L1	-3352	3885	3748	9
chr12	118589361	118589362	chunk0051_301_1	31.15699	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	118589339	118589550	-14685759	-	L2a	LINE	L2	0	3426	3209	9
chr12	118655747	118655748	chunk0051_304_1	14.7289	AR_DHT_Control	chr12	118655684	118656134	-14619175	-	MamTip3	DNA	hAT-Tip100	-9	491	6	9
chr12	119054210	119054211	chunk0051_305_1	6.94032	AR_DHT_Control	chr12	119053754	119054282	-14221027	-	L1MA2	LINE	L1	0	6304	5759	9
chr12	119319805	119319806	chunk0051_306_1	32.4672	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	119319700	119320161	-13955148	+	LTR33	LTR	ERVL	1	513	-2	9
chr12	119415916	119415917	chunk0051_309_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	119415728	119415923	-13859386	-	MER58A	DNA	hAT-Charlie	0	224	1	9
chr12	119716799	119716800	chunk0051_316_1	294.9829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	119716692	119717050	-13558259	+	L1ME3G	LINE	L1	323	692	-200	9
chr12	119728308	119728309	chunk0051_318_1	51.19007	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	119727939	119728456	-13546853	+	L1MC1	LINE	L1	5812	6333	0	9
chr12	119807613	119807614	chunk0051_319_1	9.21264	AR_DHT_Control	chr12	119807552	119807615	-13467694	+	L2b	LINE	L2	3309	3371	-4	9
chr12	119884593	119884594	chunk0051_320_1	64.7499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	119884147	119884693	-13390616	-	L1MC1	LINE	L1	-168	6165	5600	9
chr12	120237505	120237506	chunk0051_331_1	13.4882	AR_DHT_Control	chr12	120237412	120237509	-13037800	+	Chap1_Mam	DNA	hAT-Charlie	126	226	-116	9
chr12	120398341	120398342	chunk0051_346_1	88.3237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	120398333	120398380	-12876929	-	L2a	LINE	L2	-1	3425	3372	9
chr12	120480408	120480409	chunk0051_351_1	22.7291	AR_DHT_Control	chr12	120480336	120480410	-12794899	-	L2b	LINE	L2	-24	3351	3265	9
chr12	120526165	120526166	chunk0051_353_1	41.6222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	120525958	120526698	-12748611	+	Tigger6a	DNA	TcMar-Tigger	1	811	-272	9
chr12	121294622	121294623	chunk0051_362_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	121294591	121294697	-11980612	+	MIRc	SINE	MIR	35	153	-115	9
chr12	121317070	121317071	chunk0051_366_1	37.22409	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	121316762	121317253	-11958056	+	L1MB5	LINE	L1	6175	6646	-26	9
chr12	121648824	121648825	chunk0051_376_1	145.0979	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	121648757	121648936	-11626373	-	L1ME4b	LINE	L1	0	892	684	9
chr12	121712682	121712683	chunk0051_377_1	6.73207	AR_DHT_Control	chr12	121712665	121712742	-11562567	+	G-rich	Low_complexity	Low_complexity	1	77	0	9
chr12	121841404	121841405	chunk0051_385_1	99.92746	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	121841385	121841686	-11433623	+	L1MB7	LINE	L1	5602	5911	-273	9
chr12	121861565	121861566	chunk0051_388_1	67.3835	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	121861535	121861831	-11413478	+	MER68-int	LTR	ERVL	869	1178	-1812	9
chr12	121965575	121965576	chunk0051_396_1	63.7897	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	121965114	121965722	-11309587	+	L1ME3G	LINE	L1	71	688	-236	9
chr12	122072721	122072722	chunk0051_403_1	63.6521	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	122072270	122072736	-11202573	+	HAL1	LINE	L1	238	749	-1758	9
chr12	122098114	122098115	chunk0051_406_1	34.93596	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	122098092	122098125	-11177184	+	(GTTT)n	Simple_repeat	Simple_repeat	1	33	0	9
chr12	122152900	122152901	chunk0051_410_1	6.21736	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	122152800	122153162	-11122147	+	MER47B	DNA	TcMar-Tigger	22	417	-1	9
chr12	122291585	122291586	chunk0051_414_1	15.9878	AR_DHT_Control	chr12	122291489	122292010	-10983299	-	L1MC4	LINE	L1	-440	7602	7083	9
chr12	122609128	122609129	chunk0051_421_1	8.27376	AR_DHT_Control	chr12	122609094	122609209	-10666100	+	L2a	LINE	L2	3308	3426	0	9
chr12	122750260	122750261	chunk0051_424_1	7.87199	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	122749938	122750263	-10525046	+	MLT1K	LTR	ERVL-MaLR	11	332	-263	9
chr12	122796338	122796339	chunk0051_425_1	5.6425	AR_DHT_Control	chr12	122796312	122796420	-10478889	-	FLAM_A	SINE	Alu	-13	129	23	9
chr12	122839030	122839031	chunk0051_426_1	24.6101	AR_DHT_Control	chr12	122838631	122839044	-10436265	+	MLT1D	LTR	ERVL-MaLR	49	505	0	9
chr12	122926113	122926114	chunk0051_431_1	8.2993	AR_DHT_Control	chr12	122925770	122926245	-10349064	+	L1MB5	LINE	L1	5690	6174	0	9
chr12	122926626	122926627	chunk0051_432_1	10.2513	AR_DHT_Control	chr12	122926607	122926927	-10348382	+	AluJr	SINE	Alu	2	310	-2	9
chr12	123132957	123132958	chunk0051_438_1	8.15319	AR_DHT_Control	chr12	123132531	123133221	-10142088	-	L1MB4	LINE	L1	-34	6146	5493	9
chr12	123172035	123172036	chunk0051_441_1	31.6248	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	123171871	123172143	-10103166	-	L1ME3C	LINE	L1	-3	6120	5828	9
chr12	123260324	123260325	chunk0051_446_1	47.80719	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr12	123260008	123260594	-10014715	+	LTR10C	LTR	ERV1	1	591	0	9
chr12	123278227	123278228	chunk0051_448_1	37.9762	AR_DHT_Control	chr12	123278061	123278544	-9996765	-	L1MB7	LINE	L1	-145	6039	5557	9
chr12	123335746	123335747	chunk0051_449_1	46.5452	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	123335552	123335756	-9939553	-	MER58A	DNA	hAT-Charlie	-4	220	1	9
chr12	123379556	123379557	chunk0052_245_1	149.1184	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	123379353	123379699	-9895610	-	LTR50	LTR	ERVL	-298	497	37	9
chr12	123446075	123446076	chunk0052_250_1	6.48643	AR_DHT_Control	chr12	123446058	123446245	-9829064	-	MamRep488	DNA	hAT-Tip100	-33	186	1	9
chr12	123513216	123513217	chunk0052_252_1	4.29711	AR_DHT_Control	chr12	123510352	123513235	-9762074	+	(TG)n	Simple_repeat	Simple_repeat	1	3081	0	9
chr12	123654395	123654396	chunk0052_257_1	8.7059	AR_DHT_Control	chr12	123654088	123654687	-9620622	+	(GT)n	Simple_repeat	Simple_repeat	1	628	0	9
chr12	123713548	123713549	chunk0052_264_1	6.54035	AR_DHT_Control	chr12	123713513	123713718	-9561591	-	L2a	LINE	L2	0	3426	3205	9
chr12	124137065	124137066	chunk0052_270_1	19.49221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124136905	124137093	-9138216	-	MLT1K	LTR	ERVL-MaLR	-11	584	387	9
chr12	124142889	124142890	chunk0052_272_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	124142561	124143133	-9132176	+	MER61E	LTR	ERV1	1	569	0	9
chr12	124188667	124188668	chunk0052_273_1	15.16317	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124188613	124188720	-9086589	+	L2a	LINE	L2	3272	3426	0	9
chr12	124270575	124270576	chunk0052_281_1	17.3631	AR_DHT_Control	chr12	124270474	124270944	-9004365	-	L2a	LINE	L2	-96	3330	2860	9
chr12	124353039	124353040	chunk0052_282_1	5.70291	AR_DHT_Control	chr12	124352667	124353116	-8922193	+	LTR82A	LTR	ERVL	342	845	-27	9
chr12	124406251	124406252	chunk0052_289_1	34.97351	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124406097	124406285	-8869024	-	MER58A	DNA	hAT-Charlie	0	224	13	9
chr12	124504565	124504566	chunk0052_292_1	54.89242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	124504423	124505047	-8770262	+	L1MB5	LINE	L1	5527	6165	-9	9
chr12	124804449	124804450	chunk0052_303_1	5.81334	AR_DHT_Control	chr12	124804066	124804520	-8470789	+	MLT1K	LTR	ERVL-MaLR	90	573	-22	9
chr12	124825829	124825830	chunk0052_304_1	65.2364	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124825798	124826063	-8449246	+	L1MA9	LINE	L1	5887	6168	-144	9
chr12	124827963	124827964	chunk0052_307_1	30.8247	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	124827607	124828020	-8447289	+	L2a	LINE	L2	2955	3423	-3	9
chr12	125014646	125014647	chunk0052_312_1	7.52656	AR_DHT_Control	chr12	125014352	125014716	-8260593	-	MER68B	LTR	ERVL	-8	556	146	9
chr12	125041772	125041773	chunk0052_313_1	11.1716	AR_DHT_Control	chr12	125041708	125041993	-8233316	-	AluJr	SINE	Alu	-20	292	1	9
chr12	125064955	125064956	chunk0052_315_1	17.53627	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	125064953	125065122	-8210187	+	L2a	LINE	L2	3259	3421	-5	9
chr12	125080022	125080023	chunk0052_316_1	8.18895	AR_DHT_Control	chr12	125079703	125080093	-8195216	-	L1MB7	LINE	L1	-19	6165	5765	9
chr12	125635042	125635043	chunk0052_323_1	143.2249	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	125630927	125635149	-7640160	-	L1MA2	LINE	L1	-2943	4622	398	9
chr12	125812919	125812920	chunk0052_325_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	125812829	125812927	-7462382	+	MIR	SINE	MIR	166	261	-1	9
chr12	125833253	125833254	chunk0052_326_1	16.60952	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	125833142	125833499	-7441810	-	MLT1J	LTR	ERVL-MaLR	-99	511	100	9
chr12	125922470	125922471	chunk0052_330_1	6.7814	AR_DHT_Control	chr12	125922469	125922517	-7352792	+	L2a	LINE	L2	3376	3423	-3	9
chr12	125981935	125981936	chunk0052_331_1	17.2862	AR_DHT_Control	chr12	125981599	125982020	-7293289	-	MER61F	LTR	ERV1	-211	465	1	9
chr12	125990952	125990953	chunk0052_332_1	18.0019	AR_DHT_Control	chr12	125989803	125991707	-7283602	+	L1ME4a	LINE	L1	314	2237	-4005	9
chr12	126164149	126164150	chunk0052_336_1	10.8483	AR_DHT_Control	chr12	126163815	126164373	-7110936	-	LTR18B	LTR	ERVL	-72	542	1	9
chr12	126474838	126474839	chunk0052_339_1	18.1684	AR_DHT_Control	chr12	126474557	126474895	-6800414	+	L1MC3	LINE	L1	5284	5670	-2115	9
chr12	126521819	126521820	chunk0052_342_1	6.98682	AR_DHT_Control	chr12	126521749	126522128	-6753181	-	Tigger3c	DNA	TcMar-Tigger	0	602	168	9
chr12	126530064	126530065	chunk0052_344_1	7.78444	AR_DHT_Control	chr12	126529950	126530111	-6745198	+	L2c	LINE	L2	3212	3361	-14	9
chr12	126545590	126545591	chunk0052_345_1	7.77201	AR_DHT_Control	chr12	126545090	126545750	-6729559	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	9
chr12	126561426	126561427	chunk0052_347_1	60.4877	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	126560832	126562185	-6713124	+	L2b	LINE	L2	2002	3332	-43	9
chr12	126895939	126895940	chunk0052_351_1	43.0219	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	126895748	126895985	-6379324	-	MLT1K	LTR	ERVL-MaLR	-6	589	337	9
chr12	127303311	127303312	chunk0052_359_1	28.2247	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	127303299	127303431	-5971878	+	L1MA8	LINE	L1	6120	6251	-40	9
chr12	127401843	127401844	chunk0052_361_1	9.80886	AR_DHT_Control	chr12	127401491	127401926	-5873383	-	MER57A1	LTR	ERV1	0	432	1	9
chr12	127780329	127780330	chunk0052_365_1	29.544	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	127780215	127780667	-5494642	-	L1MC2	LINE	L1	-11	6333	5900	9
chr12	128206185	128206186	chunk0052_367_1	6.86162	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	128206069	128206385	-5068924	-	MER68	LTR	ERVL	-219	344	35	9
chr12	128823918	128823919	chunk0052_373_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	128823827	128823975	-4451334	+	(GCC)n	Simple_repeat	Simple_repeat	1	153	0	9
chr12	128955120	128955121	chunk0052_378_1	20.3035	AR_DHT_Control	chr12	128954993	128955155	-4320154	-	MIR	SINE	MIR	-71	191	31	9
chr12	130030982	130030983	chunk0052_388_1	8.46955	AR_DHT_Control	chr12	130030843	130031087	-3244222	+	MER50	LTR	ERV1	433	687	-47	9
chr12	130038196	130038197	chunk0052_389_1	7.92341	AR_DHT_Control	chr12	130037913	130038439	-3236870	+	L2c	LINE	L2	2868	3421	-5	9
chr12	130754621	130754622	chunk0052_397_1	5.20051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	130754397	130754837	-2520472	+	(AGCAGG)n	Simple_repeat	Simple_repeat	1	465	0	9
chr12	130886255	130886256	chunk0052_400_1	131.91964	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	130886087	130886392	-2388917	-	L1MC	LINE	L1	-445	5735	5425	9
chr12	130898569	130898570	chunk0052_403_1	8.27376	AR_DHT_Control	chr12	130898508	130899355	-2375954	-	L1ME4b	LINE	L1	-4	888	4	9
chr12	131512642	131512643	chunk0052_415_1	62.60455	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	131512327	131512693	-1762616	+	L2c	LINE	L2	2947	3359	-28	9
chr12	131513534	131513535	chunk0052_418_1	70.72548	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	131513356	131513709	-1761600	+	L2a	LINE	L2	2989	3335	-91	9
chr12	131716637	131716638	chunk0052_425_1	27.4237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	131716579	131716647	-1558662	+	MER2B	DNA	TcMar-Tigger	21	93	-243	9
chr12	131716637	131716638	chunk0052_425_1	27.4237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr12	131716635	131716799	-1558510	+	MER58B	DNA	hAT-Charlie	175	340	-1	9
chr12	131833107	131833108	chunk0052_429_1	13.7752	AR_DHT_Control	chr12	131833040	131833143	-1442166	+	MIR	SINE	MIR	75	179	-51	9
chr12	131866047	131866048	chunk0052_430_1	5.6503	AR_DHT_Control	chr12	131865997	131866114	-1409195	+	L1ME3F	LINE	L1	6108	6234	-9	9
chr12	131952699	131952700	chunk0052_434_1	6.48643	AR_DHT_Control	chr12	131952454	131952751	-1322558	-	AluJo	SINE	Alu	-4	308	1	9
chr12	131953058	131953059	chunk0052_435_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	131953028	131953274	-1322035	+	MER106A	DNA	hAT-Charlie	1	233	-3	9
chr12	132455886	132455887	chunk0052_444_1	10.4222	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	132455398	132456329	-818980	+	(TG)n	Simple_repeat	Simple_repeat	1	938	0	9
chr12	132700703	132700704	chunk0052_455_1	18.95519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr12	132700346	132700816	-574493	-	L1PB4	LINE	L1	-668	5488	4994	9
chr12	132933425	132933426	chunk0052_461_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	132933227	132933705	-341604	+	MLT1F2	LTR	ERVL-MaLR	1	560	0	9
chr12	133024238	133024239	chunk0052_463_1	5.08049	SRA057177_Lncap_AR_DHT_10nm_4hr	chr12	133024144	133025496	-249813	+	MLT1G3-int	LTR	ERVL-MaLR	13	1489	0	9
chr13	18212091	18212092	chunk0052_2_1	58.4618	Merged_Lncap_AR_Veh	chr13	18211705	18212272	-96152056	+	HSATI	Satellite	Satellite	1	567	-10	9
chr13	19016852	19016853	chunk0052_7_1	9.21264	AR_DHT_Control	chr13	19016587	19017168	-95347160	+	MER4A	LTR	ERV1	34	664	0	9
chr13	19897967	19897968	chunk0052_12_1	121.9698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	19897559	19898237	-94466091	+	L1MB2	LINE	L1	2484	3113	-3269	9
chr13	20025743	20025744	chunk0052_13_1	31.2876	AR_DHT_Control	chr13	20025671	20025953	-94338375	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	9
chr13	20057535	20057536	chunk0052_14_1	64.1269	AR_DHT_Control	chr13	20057437	20057859	-94306469	+	Tigger17	DNA	TcMar-Tigger	2216	2658	-15	9
chr13	20123391	20123392	chunk0052_16_1	7.3092	AR_DHT_Control	chr13	20123383	20123478	-94240850	+	MIR3	SINE	MIR	110	208	0	9
chr13	20217278	20217279	chunk0052_23_1	10.1791	AR_DHT_Control	chr13	20214804	20217787	-94146541	+	L1MD1	LINE	L1	3123	6139	-494	9
chr13	20497529	20497530	chunk0052_26_1	5.82105	AR_DHT_Control	chr13	20497250	20497874	-93866454	+	(CA)n	Simple_repeat	Simple_repeat	1	675	0	9
chr13	20532708	20532709	chunk0052_31_1	11.1716	AR_DHT_Control	chr13	20532338	20532837	-93831491	+	L1ME1	LINE	L1	5321	5891	-288	9
chr13	20593256	20593257	chunk0052_33_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	20593254	20593451	-93770877	-	MIR	SINE	MIR	0	262	21	9
chr13	20769239	20769240	chunk0052_36_1	44.41128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	20769230	20770097	-93594231	+	L1M4c	LINE	L1	266	1162	-5222	9
chr13	20881668	20881669	chunk0052_46_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	20881652	20881774	-93482554	+	L1ME2	LINE	L1	6053	6178	-1	9
chr13	21164757	21164758	chunk0052_60_1	70.4267	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	21164749	21164877	-93199451	-	FLAM_A	SINE	Alu	-13	129	1	9
chr13	21481523	21481524	chunk0052_74_1	4.83532	AR_DHT_Control	chr13	21481334	21481636	-92882692	-	MamRep605	LTR?	LTR?	-319	530	207	9
chr13	21713061	21713062	chunk0052_79_1	31.3899	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	21712204	21713219	-92651109	+	L1MEc	LINE	L1	1771	2924	-3395	9
chr13	21729668	21729669	chunk0052_80_1	15.8928	AR_DHT_Control	chr13	21729587	21729804	-92634524	+	MER58A	DNA	hAT-Charlie	1	222	-2	9
chr13	21753016	21753017	chunk0052_81_1	30.5288	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	21752902	21753094	-92611234	-	MIR	SINE	MIR	-51	211	15	9
chr13	22212016	22212017	chunk0052_92_1	6.10159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	22211672	22212057	-92152271	-	L3	LINE	CR1	-262	3837	3442	9
chr13	22325331	22325332	chunk0052_97_1	4.51651	AR_DHT_Control	chr13	22325318	22325418	-92038910	-	L2c	LINE	L2	-186	3201	3099	9
chr13	22469159	22469160	chunk0052_102_1	46.1166	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	22468814	22469173	-91895155	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	9
chr13	23066445	23066446	chunk0052_115_1	19.2402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	23066397	23066546	-91297782	-	L2c	LINE	L2	-20	3367	3219	9
chr13	23152827	23152828	chunk0052_116_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	23152686	23153588	-91210740	-	L1M4b	LINE	L1	-2369	4637	3765	9
chr13	23193244	23193245	chunk0052_117_1	11.1716	AR_DHT_Control	chr13	23192845	23194112	-91170216	-	L2b	LINE	L2	-5	3370	1997	9
chr13	23229716	23229717	chunk0052_120_1	20.18026	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	23229183	23231357	-91132971	-	L1PREC2	LINE	L1	-401	5759	3584	9
chr13	23463385	23463386	chunk0052_123_1	17.2307	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	23463158	23463472	-90900856	+	L1MC4	LINE	L1	7218	7575	-467	9
chr13	23500011	23500012	chunk0052_127_1	5.6425	AR_DHT_Control	chr13	23500000	23500714	-90863614	+	L1MC3	LINE	L1	6920	7640	-145	9
chr13	23540986	23540987	chunk0052_128_1	11.1716	AR_DHT_Control	chr13	23540668	23541019	-90823309	-	LTR47A2	LTR	ERVL	-76	356	1	9
chr13	23577695	23577696	chunk0052_131_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	23577390	23577722	-90786606	-	L2c	LINE	L2	0	3387	3039	9
chr13	23739889	23739890	chunk0052_139_1	5.66854	AR_DHT_Control	chr13	23739790	23739972	-90624356	-	L2b	LINE	L2	0	3375	3199	9
chr13	23743799	23743800	chunk0052_141_1	43.0852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	23743771	23743804	-90620524	+	(AC)n	Simple_repeat	Simple_repeat	1	33	0	9
chr13	23779153	23779154	chunk0052_144_1	128.2692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	23779127	23779458	-90584870	+	L1M2	LINE	L1	4078	4426	-1717	9
chr13	23793557	23793558	chunk0052_148_1	29.1302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	23793553	23794034	-90570294	-	L2a	LINE	L2	-10	3416	2779	9
chr13	23852615	23852616	chunk0052_155_1	6.62784	AR_DHT_Control	chr13	23852416	23853562	-90510766	+	Tigger3b	DNA	TcMar-Tigger	2	1189	-42	9
chr13	23853313	23853314	chunk0052_156_1	8.36569	AR_DHT_Control	chr13	23852416	23853562	-90510766	+	Tigger3b	DNA	TcMar-Tigger	2	1189	-42	9
chr13	23969903	23969904	chunk0052_162_1	42.3063	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	23969851	23970250	-90394078	-	L1ME4b	LINE	L1	-452	440	28	9
chr13	24069187	24069188	chunk0052_164_1	5.14593	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	24068002	24069642	-90294686	-	L1PA13	LINE	L1	-2	6161	4127	9
chr13	24127296	24127297	chunk0052_169_1	9.40261	AR_DHT_Control	chr13	24127137	24127556	-90236772	-	LTR33	LTR	ERVL	-42	473	1	9
chr13	24154144	24154145	chunk0052_172_1	14.82114	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	24154039	24154585	-90209743	+	L1ME3	LINE	L1	5485	6058	-104	9
chr13	24203858	24203859	chunk0052_179_1	19.03586	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	24203854	24204020	-90160308	-	L2b	LINE	L2	-9	3417	3233	9
chr13	24210040	24210041	chunk0052_181_1	40.5716	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	24209500	24211538	-90152790	-	L1MA8	LINE	L1	-368	5923	3860	9
chr13	24236813	24236814	chunk0052_182_1	27.24812	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	24236614	24237076	-90127252	+	L1MB3	LINE	L1	5371	5835	-348	1
chr13	24349287	24349288	chunk0052_185_1	14.53655	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	24348067	24350232	-90014096	-	ERVL-B4-int	LTR	ERVL	-59	5655	3388	1
chr13	24591785	24591786	chunk0052_189_1	52.5047	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	24591592	24592530	-89771798	+	LTR5_Hs	LTR	ERVK	1	968	0	1
chr13	24790520	24790521	chunk0052_192_1	15.47204	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	24790409	24790557	-89573771	-	MER3	DNA	hAT-Charlie	-4	205	64	1
chr13	24986427	24986428	chunk0052_201_1	18.262	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	24986380	24986907	-89377421	+	L1MB5	LINE	L1	5572	6124	-50	1
chr13	25084355	25084356	chunk0052_202_1	6.48643	AR_DHT_Control	chr13	25084265	25084800	-89279528	+	MER65D	LTR	ERV1	1	472	-1	1
chr13	25116307	25116308	chunk0052_204_1	36.9003	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	25116163	25116711	-89247617	+	MER41C	LTR	ERV1	1	521	0	1
chr13	25214658	25214659	chunk0052_208_1	49.25127	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	25214644	25215075	-89149253	+	MER51E	LTR	ERV1	1	480	-2	1
chr13	25234084	25234085	chunk0052_211_1	30.16579	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	25234025	25234206	-89130122	-	MER5A	DNA	hAT-Charlie	0	189	1	1
chr13	25488349	25488350	chunk0052_216_1	87.0767	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	25488156	25488403	-88875925	-	L1MB2	LINE	L1	0	6171	5921	1
chr13	25620200	25620201	chunk0052_229_1	9.08114	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	25619934	25620583	-88743745	+	L1MEd	LINE	L1	1055	1736	-5350	1
chr13	26103612	26103613	chunk0053_3_1	10.1791	AR_DHT_Control	chr13	26102953	26103848	-88260480	+	L1P3	LINE	L1	8	896	-5565	1
chr13	26179573	26179574	chunk0053_7_1	13.48136	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	26179251	26179662	-88184666	-	MER70B	LTR	ERVL	-152	426	4	1
chr13	26228271	26228272	chunk0053_11_1	4.83532	AR_DHT_Control	chr13	26226795	26228656	-88135672	-	ERV3-16A3_I-int	LTR	ERVL	-702	4524	2633	1
chr13	26499429	26499430	chunk0053_18_1	6.48643	AR_DHT_Control	chr13	26499409	26499632	-87864696	+	MIRb	SINE	MIR	9	246	-22	1
chr13	26571607	26571608	chunk0053_19_1	6.28518	AR_DHT_Control	chr13	26571324	26572577	-87791751	-	L1MC4a	LINE	L1	-1077	5137	3867	1
chr13	26635846	26635847	chunk0053_22_1	132.3385	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	26633503	26636653	-87727675	-	L1PA6	LINE	L1	-3008	3138	1	1
chr13	26839987	26839988	chunk0053_25_1	53.6176	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	26839923	26839999	-87524329	+	L2b	LINE	L2	3300	3374	-1	1
chr13	27088532	27088533	chunk0053_32_1	83.2221	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	27088439	27088900	-87275428	+	MER68	LTR	ERVL	62	563	0	1
chr13	27092004	27092005	chunk0053_33_1	5.87933	AR_DHT_Control	chr13	27091906	27092116	-87272212	+	L2c	LINE	L2	3133	3359	-28	1
chr13	27324267	27324268	chunk0053_37_1	71.0787	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	27323770	27324346	-87039982	+	L1MC1	LINE	L1	5146	5743	-590	1
chr13	27360689	27360690	chunk0053_38_1	65.12854	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	27360620	27360764	-87003564	+	L2a	LINE	L2	3264	3425	-1	1
chr13	27393599	27393600	chunk0053_40_1	20.08362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	27393236	27393809	-86970519	+	L1MD1	LINE	L1	5462	6035	-207	1
chr13	27426295	27426296	chunk0053_42_1	17.7743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	27426266	27426327	-86938001	-	L2a	LINE	L2	-4	3422	3360	1
chr13	27495736	27495737	chunk0053_45_1	22.70454	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	27495464	27495850	-86868478	+	L1ME2	LINE	L1	5768	6144	-20	1
chr13	27576921	27576922	chunk0053_49_1	36.8296	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	27576747	27577134	-86787194	+	L1M4	LINE	L1	5481	5836	-808	1
chr13	27601996	27601997	chunk0053_50_1	57.0473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	27601854	27602131	-86762197	-	L1ME2z	LINE	L1	-5	6439	6126	1
chr13	27678217	27678218	chunk0053_56_1	11.0019	AR_DHT_Control	chr13	27678161	27678325	-86686003	+	L1M5	LINE	L1	5581	5744	-700	1
chr13	28097694	28097695	chunk0053_63_1	10.1791	AR_DHT_Control	chr13	28097632	28097703	-86266625	-	L3	LINE	CR1	-2	4097	4029	1
chr13	28118180	28118181	chunk0053_64_1	6.48643	AR_DHT_Control	chr13	28118069	28118379	-86245949	+	MLT1F2	LTR	ERVL-MaLR	167	499	-61	1
chr13	28145256	28145257	chunk0053_65_1	47.4771	AR_DHT_Control	chr13	28145062	28145266	-86219062	-	L1MD2	LINE	L1	-3	6356	6135	1
chr13	28394668	28394669	chunk0053_75_1	34.92067	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	28394654	28395294	-85969034	+	MER115	DNA	hAT-Tip100	1	693	0	1
chr13	28456035	28456036	chunk0053_86_1	18.2513	AR_DHT_Control	chr13	28454567	28456515	-85907813	+	L1MC3	LINE	L1	4058	5979	-1806	1
chr13	28490113	28490114	chunk0053_91_1	5.25501	AR_DHT_Control	chr13	28490044	28490209	-85874119	+	MIR3	SINE	MIR	19	189	-19	1
chr13	28514117	28514118	chunk0053_92_1	154.3151	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	28513255	28514282	-85850046	-	L1MCa	LINE	L1	-4483	2025	998	1
chr13	28588480	28588481	chunk0053_97_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	28588251	28588613	-85775715	+	L1M5	LINE	L1	5261	5595	-529	1
chr13	28646891	28646892	chunk0053_99_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	28646361	28647256	-85717072	+	L1M5	LINE	L1	3519	4434	-1712	1
chr13	28648652	28648653	chunk0053_100_1	6.0927	AR_DHT_Control	chr13	28648561	28649215	-85715113	+	Tigger13a	DNA	TcMar-Tigger	9	686	-85	1
chr13	28952750	28952751	chunk0053_109_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	28952688	28953099	-85411229	-	L1MC4a	LINE	L1	-1970	5912	5443	1
chr13	29451042	29451043	chunk0053_113_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	29450596	29451420	-84912908	+	L1MD	LINE	L1	2147	2979	-3167	1
chr13	29455132	29455133	chunk0053_115_1	13.1652	AR_DHT_Control	chr13	29454879	29455698	-84908630	+	L1MEf	LINE	L1	38	1227	-1525	1
chr13	29554967	29554968	chunk0053_119_1	15.46375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	29554909	29555076	-84809252	-	L1MC4	LINE	L1	-65	7977	7814	1
chr13	29616248	29616249	chunk0053_121_1	10.1791	AR_DHT_Control	chr13	29615477	29619673	-84744655	+	L1PB1	LINE	L1	2567	6866	-1	1
chr13	29693898	29693899	chunk0053_123_1	8.21385	AR_DHT_Control	chr13	29693816	29693913	-84670415	+	MIR1_Amn	SINE	MIR	53	148	-82	1
chr13	29809359	29809360	chunk0053_128_1	47.66981	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	29809035	29809713	-84554615	-	L2c	LINE	L2	-2	3385	2644	1
chr13	29810549	29810550	chunk0053_130_1	28.24576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	29810063	29810601	-84553727	-	L2c	LINE	L2	-776	2643	2001	1
chr13	30026945	30026946	chunk0053_140_1	8.21408	AR_DHT_Control	chr13	30026829	30027184	-84337144	+	MER34B	LTR	ERV1	1	349	-216	1
chr13	30027587	30027588	chunk0053_141_1	7.77075	AR_DHT_Control	chr13	30027466	30027652	-84336676	+	MER34B	LTR	ERV1	350	536	-29	1
chr13	30104389	30104390	chunk0053_145_1	4.36845	AR_DHT_Control	chr13	30104087	30104519	-84259809	-	L1MC4a	LINE	L1	-1962	5920	5569	1
chr13	30289826	30289827	chunk0053_156_1	19.9492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	30287831	30290120	-84074208	-	Cheshire	DNA	hAT-Charlie	0	2420	1	1
chr13	30673990	30673991	chunk0053_165_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	30673963	30674037	-83690291	-	tRNA-Asn-AAC	tRNA	tRNA	-3	74	1	1
chr13	30690900	30690901	chunk0053_166_1	13.5952	AR_DHT_Control	chr13	30690777	30691138	-83673190	+	LTR78B	LTR	ERV1	742	1114	-182	1
chr13	30973046	30973047	chunk0053_181_1	65.7051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	30972936	30973538	-83390790	+	L1ME2	LINE	L1	5557	6164	0	1
chr13	30984307	30984308	chunk0053_183_1	33.439	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	30983949	30984385	-83379943	-	L1ME1	LINE	L1	-51	6923	6486	1
chr13	31311057	31311058	chunk0053_189_1	7.36432	AR_DHT_Control	chr13	31309984	31311087	-83053241	+	LTR27E	LTR	ERV1	1	1077	0	1
chr13	31562395	31562396	chunk0053_190_1	17.799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	31559697	31562817	-82801511	-	L1PA7	LINE	L1	-3	6151	2937	1
chr13	31613188	31613189	chunk0053_191_1	94.0789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	31612764	31613261	-82751067	-	MLT2B4	LTR	ERVL	0	556	13	1
chr13	31657551	31657552	chunk0053_194_1	15.32536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	31657438	31657767	-82706561	+	MER110	LTR	ERV1	151	479	-12	1
chr13	31706237	31706238	chunk0053_196_1	21.47164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	31705615	31706309	-82658019	+	L2	LINE	L2	577	1384	-2035	1
chr13	31949263	31949264	chunk0053_205_1	19.5428	AR_DHT_Control	chr13	31948720	31949318	-82415010	+	L2c	LINE	L2	2741	3379	-8	1
chr13	32017070	32017071	chunk0053_206_1	17.983	AR_DHT_Control	chr13	32017043	32017388	-82346940	-	L2b	LINE	L2	-16	3359	3014	1
chr13	32080448	32080449	chunk0053_215_1	9.99437	AR_DHT_Control	chr13	32080294	32080519	-82283809	-	MIR	SINE	MIR	0	262	3	1
chr13	32321297	32321298	chunk0053_227_1	17.9956	AR_DHT_Control	chr13	32321217	32321485	-82042843	-	L2c	LINE	L2	-2	3385	3109	1
chr13	32412725	32412726	chunk0053_230_1	8.27376	AR_DHT_Control	chr13	32412665	32412773	-81951555	-	L1MC4	LINE	L1	-172	7870	7766	1
chr13	32468344	32468345	chunk0053_233_1	16.56654	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	32468022	32468363	-81895965	-	L2	LINE	L2	-962	2457	2087	1
chr13	32507422	32507423	chunk0053_234_1	10.186	AR_DHT_Control	chr13	32507388	32507525	-81856803	-	L2b	LINE	L2	-6	3420	3276	1
chr13	32628857	32628858	chunk0053_235_1	22.6841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	32628777	32629051	-81735277	-	L1ME3G	LINE	L1	-359	565	279	1
chr13	32643593	32643594	chunk0053_239_1	11.4584	AR_DHT_Control	chr13	32643525	32643868	-81720460	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	1
chr13	32663870	32663871	chunk0053_241_1	19.1207	AR_DHT_Control	chr13	32663727	32664149	-81700179	-	L1PB3	LINE	L1	-7	6147	5725	1
chr13	32698402	32698403	chunk0053_244_1	9.21264	AR_DHT_Control	chr13	32698345	32698413	-81665915	-	Charlie14a	DNA	hAT-Charlie	-1096	70	1	1
chr13	32934399	32934400	chunk0053_251_1	52.6238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	32934313	32934422	-81429906	+	MIRc	SINE	MIR	96	216	-52	1
chr13	32985010	32985011	chunk0053_252_1	111.1033	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	32984834	32985118	-81379210	+	L2b	LINE	L2	3118	3374	-1	1
chr13	33045032	33045033	chunk0053_255_1	5.42901	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	33044837	33045069	-81319259	-	L1ME2	LINE	L1	-1838	4308	4094	1
chr13	33046489	33046490	chunk0053_257_1	44.5932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	33045778	33047212	-81317116	-	L1MEc	LINE	L1	-2134	4185	2763	1
chr13	33081143	33081144	chunk0053_260_1	24.63754	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	33081131	33081271	-81283057	+	L1MC3	LINE	L1	7451	7591	-194	1
chr13	33101126	33101127	chunk0053_264_1	6.0927	AR_DHT_Control	chr13	33100756	33101444	-81262884	+	Tigger17c	DNA	TcMar-Tigger	8	705	-483	1
chr13	33114205	33114206	chunk0053_265_1	115.3435	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	33113968	33114229	-81250099	+	Charlie7a	DNA	hAT-Charlie	1	265	-7	1
chr13	33196933	33196934	chunk0053_272_1	13.53803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	33196503	33196964	-81167364	+	Charlie7	DNA	hAT-Charlie	215	689	-1923	1
chr13	33228024	33228025	chunk0053_276_1	134.0031	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	33227818	33228203	-81136125	-	L2b	LINE	L2	-33	3342	2986	1
chr13	33474206	33474207	chunk0053_287_1	19.8431	AR_DHT_Control	chr13	33473613	33475333	-80888995	+	LOR1-int	LTR	ERV1	1	1743	-6377	1
chr13	33479555	33479556	chunk0053_288_1	20.79324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	33478928	33479619	-80884709	+	L1MC5	LINE	L1	6611	7229	-2075	1
chr13	33883014	33883015	chunk0053_307_1	148.3921	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	33882719	33883155	-80481173	-	L1MD2	LINE	L1	-285	6074	5615	1
chr13	34011764	34011765	chunk0053_308_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	34011143	34012097	-80352231	+	LTR1D	LTR	ERV1	3	975	0	1
chr13	34049190	34049191	chunk0053_311_1	10.1791	AR_DHT_Control	chr13	34049182	34049389	-80314939	+	MLT1A1	LTR	ERVL-MaLR	200	394	-14	1
chr13	34147987	34147988	chunk0053_314_1	68.55812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	34147974	34148478	-80215850	+	LTR33A	LTR	ERVL	15	508	-12	1
chr13	34201567	34201568	chunk0053_319_1	14.91265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	34201526	34202009	-80162319	+	L1MEg	LINE	L1	4	514	-5938	1
chr13	34317729	34317730	chunk0053_323_1	41.2775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	34317499	34318014	-80046314	-	L2a	LINE	L2	-1454	1965	1431	1
chr13	34386138	34386139	chunk0053_333_1	6.48643	AR_DHT_Control	chr13	34386128	34386407	-79977921	+	LTR33	LTR	ERVL	141	429	-86	1
chr13	34412187	34412188	chunk0053_334_1	6.38514	AR_DHT_Control	chr13	34412019	34412325	-79952003	-	Tigger3a	DNA	TcMar-Tigger	0	348	36	1
chr13	34432287	34432288	chunk0053_335_1	9.21264	AR_DHT_Control	chr13	34432263	34432540	-79931788	-	ERVL-E-int	LTR	ERVL	-3964	1703	1429	1
chr13	34762774	34762775	chunk0053_346_1	121.5167	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	34762652	34762784	-79601544	-	Tigger12	DNA	TcMar-Tigger	-25	2450	2314	1
chr13	34827375	34827376	chunk0053_350_1	69.691	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	34827290	34827498	-79536830	-	L2b	LINE	L2	-10	3377	3167	1
chr13	34960772	34960773	chunk0053_353_1	22.2389	AR_DHT_Control	chr13	34959691	34960858	-79403470	+	Tigger3b	DNA	TcMar-Tigger	10	1231	0	1
chr13	35036936	35036937	chunk0053_355_1	12.1886	AR_DHT_Control	chr13	35032621	35038080	-79326248	-	L1M1	LINE	L1	-764	6957	1376	1
chr13	35270742	35270743	chunk0053_363_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	35270359	35275864	-79088464	+	L1P2	LINE	L1	5	5501	-653	1
chr13	35620065	35620066	chunk0053_368_1	45.84392	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	35619941	35620085	-78744243	-	L2b	LINE	L2	-1	3374	3214	1
chr13	35964900	35964901	chunk0053_378_1	125.99459	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	35964696	35965029	-78399299	+	MER58B	DNA	hAT-Charlie	3	341	0	1
chr13	36029441	36029442	chunk0053_381_1	71.5486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36029186	36029461	-78334867	+	L2c	LINE	L2	3096	3383	-4	1
chr13	36195327	36195328	chunk0053_389_1	8.27376	AR_DHT_Control	chr13	36194986	36195676	-78168652	-	L2b	LINE	L2	-17	3358	2697	1
chr13	36302509	36302510	chunk0053_392_1	195.06706	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36302340	36302554	-78061774	-	MER58A	DNA	hAT-Charlie	-7	217	1	1
chr13	36323745	36323746	chunk0053_397_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36323330	36323828	-78040500	+	L4_A_Mam	LINE	RTE-X	3097	3698	-1292	1
chr13	36393694	36393695	chunk0053_403_1	30.8247	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36392747	36393927	-77970401	-	L1PA15	LINE	L1	-47	6118	4926	1
chr13	36735568	36735569	chunk0053_406_1	20.13199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36735456	36735612	-77628716	-	MamRTE1	LINE	RTE-BovB	-4	3808	3632	1
chr13	36906919	36906920	chunk0053_409_1	24.87936	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	36906515	36907386	-77456942	+	L1MB4	LINE	L1	5262	6132	-48	1
chr13	37106825	37106826	chunk0053_416_1	8.27376	AR_DHT_Control	chr13	37106667	37106926	-77257402	-	MLT1I	LTR	ERVL-MaLR	-18	393	61	1
chr13	37349472	37349473	chunk0053_421_1	14.70459	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	37349396	37349507	-77014821	+	L2a	LINE	L2	3291	3423	-3	1
chr13	37627702	37627703	chunk0053_425_1	37.947	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	37626973	37627979	-76736349	+	L1MD2	LINE	L1	5008	6030	-329	1
chr13	38372975	38372976	chunk0053_429_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	38372796	38373753	-75990575	-	HSMAR2	DNA	TcMar-Mariner	-337	965	2	1
chr13	38898508	38898509	chunk0053_430_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	38898283	38898548	-75465780	-	Tigger3b	DNA	TcMar-Tigger	-826	405	139	1
chr13	38907448	38907449	chunk0053_433_1	34.56779	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	38907443	38907476	-75456852	+	L1MC4	LINE	L1	6447	6480	-1562	1
chr13	38943419	38943420	chunk0053_435_1	88.653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	38943258	38943727	-75420601	+	MER68	LTR	ERVL	1	472	-91	1
chr13	39066169	39066170	chunk0053_437_1	63.3786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	39065986	39066266	-75298062	-	L1MB2	LINE	L1	-1131	5009	4765	1
chr13	39363354	39363355	chunk0053_441_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	39363348	39363404	-75000924	-	MIR3	SINE	MIR	-2	206	154	1
chr13	39700081	39700082	chunk0053_442_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	39700054	39700097	-74664231	+	A-rich	Low_complexity	Low_complexity	1	44	0	1
chr13	39735536	39735537	chunk0053_443_1	11.1716	AR_DHT_Control	chr13	39733530	39736410	-74627918	-	L1M1	LINE	L1	-2399	5166	2255	1
chr13	39816403	39816404	chunk0053_445_1	15.61132	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	39816396	39816514	-74547814	+	L3	LINE	CR1	1776	1896	-2203	1
chr13	39914111	39914112	chunk0053_449_1	39.58415	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	39913694	39914270	-74450058	+	L2b	LINE	L2	2549	3154	-221	1
chr13	40446747	40446748	chunk0054_11_1	13.24445	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	40446607	40446915	-73917413	+	MLT1C	LTR	ERVL-MaLR	2	352	-115	1
chr13	40476792	40476793	chunk0054_12_1	144.4298	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	40476789	40476927	-73887401	+	MamTip2	DNA	hAT-Tip100	1	158	-147	1
chr13	40996252	40996253	chunk0054_32_1	18.3425	AR_DHT_Control	chr13	40995472	40996534	-73367794	+	L1MC1	LINE	L1	4743	5878	-455	1
chr13	41017347	41017348	chunk0054_33_1	28.9397	AR_DHT_Control	chr13	41017318	41017467	-73346861	+	MIR3	SINE	MIR	39	208	0	1
chr13	41025587	41025588	chunk0054_35_1	45.8716	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	41025516	41025628	-73338700	-	MIR3	SINE	MIR	-27	181	58	1
chr13	41136574	41136575	chunk0054_42_1	7.77075	AR_DHT_Control	chr13	41136265	41136615	-73227713	+	MER89-int	LTR	ERV1	6191	6547	-254	1
chr13	41295389	41295390	chunk0054_44_1	22.23744	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	41294453	41295771	-73068557	+	MER101-int	LTR	ERV1	1985	3440	-3199	1
chr13	41696697	41696698	chunk0054_52_1	13.3531	AR_DHT_Control	chr13	41696691	41697443	-72666885	+	L2a	LINE	L2	2050	2914	-505	1
chr13	41781591	41781592	chunk0054_58_1	48.59654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	41781538	41781606	-72582722	+	L2a	LINE	L2	3331	3399	-27	1
chr13	41804955	41804956	chunk0054_60_1	7.36432	AR_DHT_Control	chr13	41803727	41805531	-72558797	+	L1M1	LINE	L1	2167	4026	-3539	1
chr13	41812078	41812079	chunk0054_61_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	41811972	41812219	-72552109	+	MIRb	SINE	MIR	7	268	0	1
chr13	41903562	41903563	chunk0054_63_1	25.6264	AR_DHT_Control	chr13	41903396	41903823	-72460505	-	L2a	LINE	L2	-113	3313	2811	1
chr13	41944813	41944814	chunk0054_64_1	11.3499	AR_DHT_Control	chr13	41944611	41946681	-72417647	+	L1M4	LINE	L1	550	2718	-5096	1
chr13	42284227	42284228	chunk0054_79_1	68.6693	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	42283987	42284239	-72080089	+	MIRb	SINE	MIR	8	263	-5	1
chr13	42415941	42415942	chunk0054_81_1	14.45876	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	42415703	42416009	-71948319	-	MER2	DNA	TcMar-Tigger	0	345	1	1
chr13	42422101	42422102	chunk0054_82_1	11.1716	AR_DHT_Control	chr13	42422067	42422248	-71942080	+	MER53	DNA	hAT	2	192	-1	1
chr13	42503934	42503935	chunk0054_84_1	9.21264	AR_DHT_Control	chr13	42503908	42504023	-71860305	-	L1MEd	LINE	L1	-592	1915	1801	1
chr13	42537579	42537580	chunk0054_86_1	47.3503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	42537499	42537659	-71826669	-	L4_C_Mam	LINE	RTE-X	-266	4872	4707	1
chr13	42689724	42689725	chunk0054_95_1	17.08082	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	42689572	42689993	-71674335	-	LTR52	LTR	ERVL	-1	420	3	1
chr13	42790652	42790653	chunk0054_102_1	7.97574	AR_DHT_Control	chr13	42790364	42790782	-71573546	+	LTR89	LTR	ERVL?	315	765	-114	1
chr13	42853154	42853155	chunk0054_104_1	57.6256	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	42852926	42853233	-71511095	+	MamRTE1	LINE	RTE-BovB	2875	3198	-614	1
chr13	42924424	42924425	chunk0054_117_1	444.5703	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	42924226	42924447	-71439881	+	Plat_L3	LINE	CR1	2572	2793	-793	1
chr13	43096438	43096439	chunk0054_119_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	43096397	43096532	-71267796	+	CR1-3_Croc	LINE	CR1	2549	2687	-918	1
chr13	43168815	43168816	chunk0054_121_1	8.27376	AR_DHT_Control	chr13	43168593	43169058	-71195270	-	MER72	LTR	ERV1	-217	505	1	1
chr13	43465390	43465391	chunk0054_127_1	7.36432	AR_DHT_Control	chr13	43464579	43465895	-70898433	-	L1MC3	LINE	L1	-12	7773	6408	1
chr13	43501476	43501477	chunk0054_130_1	9.21264	AR_DHT_Control	chr13	43500964	43504968	-70859360	+	L1MA10	LINE	L1	3386	7735	-18	1
chr13	43682321	43682322	chunk0054_139_1	58.9592	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	43682297	43682515	-70681813	+	UCON27	Unknown	Unknown	697	912	-356	1
chr13	44123531	44123532	chunk0054_156_1	10.7214	AR_DHT_Control	chr13	44123468	44123772	-70240556	-	L1M5	LINE	L1	-565	5629	5284	1
chr13	44126221	44126222	chunk0054_157_1	36.90801	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	44126183	44126388	-70237940	-	MIRb	SINE	MIR	-31	231	2	1
chr13	44389371	44389372	chunk0054_175_1	13.90473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	44389224	44389476	-69974852	+	MIR	SINE	MIR	7	262	0	1
chr13	44457051	44457052	chunk0054_176_1	19.79722	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	44457021	44457262	-69907066	+	Tigger9b	DNA	TcMar-Tigger	1	246	-378	1
chr13	44812479	44812480	chunk0054_185_1	45.86332	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	44812246	44814255	-69550073	-	HAL1	LINE	L1	-214	2293	44	1
chr13	44961449	44961450	chunk0054_198_1	29.7001	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	44961289	44961482	-69402846	+	MIRb	SINE	MIR	51	267	-1	1
chr13	45006809	45006810	chunk0054_201_1	20.7038	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	45006699	45006880	-69357448	+	MIRb	SINE	MIR	89	253	-15	1
chr13	45021931	45021932	chunk0054_203_1	26.89276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	45021869	45022533	-69341795	+	L1ME2z	LINE	L1	5580	6271	-173	1
chr13	45168367	45168368	chunk0054_211_1	6.48643	AR_DHT_Control	chr13	45168222	45168485	-69195843	+	LTR16C	LTR	ERVL	6	275	-214	1
chr13	45252400	45252401	chunk0054_214_1	12.6794	AR_DHT_Control	chr13	45252370	45252432	-69111896	+	MER3	DNA	hAT-Charlie	1	62	-147	1
chr13	45450416	45450417	chunk0054_223_1	6.48643	AR_DHT_Control	chr13	45450359	45450743	-68913585	-	MER4C	LTR	ERV1	-1	464	81	1
chr13	45538161	45538162	chunk0054_227_1	108.59972	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	45538057	45538265	-68826063	+	L2a	LINE	L2	3166	3410	-16	1
chr13	45610486	45610487	chunk0054_232_1	5.6425	AR_DHT_Control	chr13	45609836	45610574	-68753754	+	LTR8A	LTR	ERV1	1	727	0	1
chr13	46164788	46164789	chunk0054_246_1	52.70221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	46164759	46164900	-68199428	-	MIR3	SINE	MIR	-24	184	47	1
chr13	46260532	46260533	chunk0054_255_1	5.69226	AR_DHT_Control	chr13	46260434	46260876	-68103452	-	L2b	LINE	L2	-5	3382	2886	1
chr13	46295193	46295194	chunk0054_258_1	57.07646	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	46295112	46295348	-68068980	-	L1M5	LINE	L1	-476	5648	5413	1
chr13	46318275	46318276	chunk0054_259_1	20.15363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	46317770	46319497	-68044831	+	L1MA5A	LINE	L1	4556	6296	-1	1
chr13	46421625	46421626	chunk0054_261_1	17.55268	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	46421549	46423729	-67940599	+	LTR53-int	LTR	ERVL	1	2178	-1378	1
chr13	47054153	47054154	chunk0054_285_1	5.6425	AR_DHT_Control	chr13	47054050	47054423	-67309905	-	L1M5	LINE	L1	-470	5654	5260	1
chr13	47168752	47168753	chunk0054_286_1	6.48643	AR_DHT_Control	chr13	47167718	47168791	-67195537	-	Tigger6a	DNA	TcMar-Tigger	0	1083	1	1
chr13	47479214	47479215	chunk0054_288_1	24.1379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	47478777	47479427	-66884901	+	Ricksha_b	DNA	MULE-MuDR	114	802	-453	1
chr13	47936223	47936224	chunk0054_289_1	29.5636	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	47936072	47936573	-66427755	+	L1ME4a	LINE	L1	5610	6108	-16	1
chr13	48018633	48018634	chunk0054_292_1	68.4709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	48018373	48019087	-66345241	-	L1MB3	LINE	L1	-32	6151	5432	1
chr13	48213342	48213343	chunk0054_294_1	6.48643	AR_DHT_Control	chr13	48213190	48213443	-66150885	-	L1MA6	LINE	L1	-239	6061	5825	1
chr13	48391399	48391400	chunk0054_304_1	131.723	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	48390640	48391472	-65972856	-	L1MEc	LINE	L1	-3684	2635	1778	1
chr13	48493923	48493924	chunk0054_308_1	34.24967	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	48493372	48493962	-65870366	+	L2a	LINE	L2	2759	3426	0	1
chr13	48655661	48655662	chunk0054_313_1	70.91206	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	48655658	48655787	-65708541	-	MIRc	SINE	MIR	-17	251	114	1
chr13	48783504	48783505	chunk0054_314_1	5.6425	AR_DHT_Control	chr13	48782256	48784305	-65580023	-	L1PBb	LINE	L1	-5220	1643	376	1
chr13	48980414	48980415	chunk0054_319_1	6.29634	AR_DHT_Control	chr13	48980374	48980647	-65383681	+	Tigger15a	DNA	TcMar-Tigger	392	679	-36	1
chr13	48983660	48983661	chunk0054_320_1	6.23615	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	48983607	48983665	-65380663	+	L2c	LINE	L2	3313	3368	-19	1
chr13	49312787	49312788	chunk0054_332_1	26.8317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	49312780	49313026	-65051302	-	L1ME3Cz	LINE	L1	-7	990	693	1
chr13	49384696	49384697	chunk0054_335_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	49383558	49386063	-64978265	-	Tigger1	DNA	TcMar-Tigger	-1	2417	1	1
chr13	49417608	49417609	chunk0054_339_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	49417455	49417865	-64946463	-	MERX	DNA	TcMar-Tigger	-291	465	24	1
chr13	49453195	49453196	chunk0054_340_1	58.2479	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	49452430	49453294	-64911034	-	L1MC3	LINE	L1	-25	7760	6908	1
chr13	49453737	49453738	chunk0054_342_1	5.00614	AR_DHT_Control	chr13	49453596	49454140	-64910188	-	L1MC3	LINE	L1	-878	6907	6377	1
chr13	49569906	49569907	chunk0054_349_1	15.3744	AR_DHT_Control	chr13	49569748	49569933	-64794395	+	AluJb	SINE	Alu	134	306	-6	1
chr13	49772887	49772888	chunk0054_365_1	74.8436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	49772815	49773335	-64590993	+	L1ME1	LINE	L1	5595	6120	-59	1
chr13	49792699	49792700	chunk0054_366_1	7.53305	AR_DHT_Control	chr13	49792663	49792727	-64571601	+	G-rich	Low_complexity	Low_complexity	1	64	0	1
chr13	49930732	49930733	chunk0054_372_1	236.4614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	49930716	49930923	-64433405	-	MIRc	SINE	MIR	0	268	27	1
chr13	50001498	50001499	chunk0054_377_1	52.745	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50001483	50001632	-64362696	+	L5	LINE	RTE-X	1837	1992	-273	1
chr13	50115526	50115527	chunk0054_378_1	52.54631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	50115465	50115714	-64248614	+	LTR50	LTR	ERVL	244	678	-117	1
chr13	50217519	50217520	chunk0054_382_1	77.1353	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50213077	50217559	-64146769	+	L1MB7	LINE	L1	119	4827	-1817	1
chr13	50241635	50241636	chunk0054_385_1	75.29861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50241269	50241898	-64122430	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	1
chr13	50320427	50320428	chunk0054_388_1	35.106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50320427	50320470	-64043858	+	L2b	LINE	L2	3329	3371	-4	1
chr13	50334237	50334238	chunk0054_390_1	21.10095	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	50334134	50334322	-64030006	+	MIR3	SINE	MIR	16	201	-7	1
chr13	50357882	50357883	chunk0054_392_1	3.81232	AR_DHT_Control	chr13	50357864	50357900	-64006428	-	LTR27	LTR	ERV1	-104	532	498	1
chr13	50385955	50385956	chunk0054_396_1	10.8743	AR_DHT_Control	chr13	50385841	50385958	-63978370	-	MER102c	DNA	hAT-Charlie	0	331	203	1
chr13	50458394	50458395	chunk0054_402_1	7.24914	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	50458229	50458967	-63905361	-	Helitron1Nb_Mam	RC	Helitron	-366	750	1	1
chr13	50460293	50460294	chunk0054_403_1	20.74657	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	50460129	50460393	-63903935	+	L3	LINE	CR1	3815	4082	-17	1
chr13	50556640	50556641	chunk0054_408_1	17.66017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50556357	50557694	-63806634	+	Tigger2	DNA	TcMar-Tigger	1134	2487	-231	1
chr13	50568409	50568410	chunk0054_409_1	35.4097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	50568232	50568424	-63795904	-	L1MC	LINE	L1	-2829	3317	3106	1
chr13	50644307	50644308	chunk0054_411_1	16.68622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	50644210	50644420	-63719908	-	L2a	LINE	L2	-4	3422	3186	1
chr13	50660393	50660394	chunk0054_413_1	9.21264	AR_DHT_Control	chr13	50660179	50660746	-63703582	-	L1ME1	LINE	L1	-155	7115	6526	1
chr13	50879488	50879489	chunk0054_416_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	50879439	50879649	-63484679	-	MER58A	DNA	hAT-Charlie	-1	223	2	1
chr13	50941364	50941365	chunk0054_420_1	6.7814	AR_DHT_Control	chr13	50941175	50941378	-63422950	-	MIRb	SINE	MIR	-18	250	25	1
chr13	50979397	50979398	chunk0054_422_1	29.0879	AR_DHT_Control	chr13	50979176	50980132	-63384196	+	L1M7	LINE	L1	45	1087	-5131	1
chr13	51042515	51042516	chunk0054_426_1	51.73894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51042466	51042690	-63321638	-	MER58A	DNA	hAT-Charlie	-8	216	2	1
chr13	51324396	51324397	chunk0054_435_1	154.6009	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51324283	51324490	-63039838	+	L2b	LINE	L2	3192	3386	-1	1
chr13	51380499	51380500	chunk0054_437_1	12.95863	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51380462	51380500	-62983828	+	MIR	SINE	MIR	168	205	-57	1
chr13	51401290	51401291	chunk0054_444_1	43.2269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51401239	51401316	-62963012	-	L2a	LINE	L2	0	3426	3344	1
chr13	51412763	51412764	chunk0054_445_1	48.2254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51412693	51412775	-62951553	-	Chap1_Mam	DNA	hAT-Charlie	-245	97	5	1
chr13	51419415	51419416	chunk0054_447_1	92.0491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51419385	51419508	-62944820	+	L2c	LINE	L2	2924	3048	-339	1
chr13	51551714	51551715	chunk0055_2_1	9.5124	AR_DHT_Control	chr13	51551325	51551812	-62812516	-	L1ME4b	LINE	L1	-17	875	366	1
chr13	51682431	51682432	chunk0055_11_1	57.3107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	51682377	51682487	-62681841	+	L2b	LINE	L2	3261	3375	0	1
chr13	51836477	51836478	chunk0055_20_1	52.7776	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51836385	51836738	-62527590	-	L1MC4	LINE	L1	-285	7710	7195	1
chr13	51954082	51954083	chunk0055_27_1	10.4948	AR_DHT_Control	chr13	51954035	51954304	-62410024	-	L2c	LINE	L2	-177	3210	2925	1
chr13	51977691	51977692	chunk0055_31_1	48.87	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	51977182	51977890	-62386438	-	Tigger3b	DNA	TcMar-Tigger	-478	753	18	1
chr13	52252933	52252934	chunk0055_45_1	80.5414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	52251916	52253386	-62110942	+	L1MA8	LINE	L1	4771	6291	0	1
chr13	52338270	52338271	chunk0055_46_1	9.13774	AR_DHT_Control	chr13	52338176	52338814	-62025514	-	L1ME3A	LINE	L1	-7	6166	5488	1
chr13	52393235	52393236	chunk0055_50_1	38.6923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	52393066	52393313	-61971015	+	MIR	SINE	MIR	5	252	-10	1
chr13	52484990	52484991	chunk0055_54_1	19.9141	AR_DHT_Control	chr13	52484685	52485061	-61879267	+	L1ME3A	LINE	L1	5779	6166	-7	1
chr13	52553535	52553536	chunk0055_55_1	122.2428	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	52553084	52554554	-61809774	-	L1MA8	LINE	L1	0	6291	4771	1
chr13	52646581	52646582	chunk0055_60_1	20.84973	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	52646443	52647392	-61716936	-	L1ME1	LINE	L1	-405	5774	4611	1
chr13	52669302	52669303	chunk0055_61_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	52669241	52669337	-61694991	-	MER53	DNA	hAT	0	193	100	1
chr13	52706486	52706487	chunk0055_62_1	17.4969	AR_DHT_Control	chr13	52706396	52706501	-61657827	-	MIRb	SINE	MIR	-2	260	163	1
chr13	52729349	52729350	chunk0055_66_1	94.41983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	52729327	52729476	-61634852	+	MER20B	DNA	hAT-Charlie	217	365	-418	1
chr13	52760213	52760214	chunk0055_69_1	110.4307	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	52759277	52760393	-61603935	-	L1M6B	LINE	L1	-1317	1190	13	1
chr13	52903570	52903571	chunk0055_72_1	10.1791	AR_DHT_Control	chr13	52903534	52903644	-61460684	+	L2c	LINE	L2	3265	3375	-12	1
chr13	53562616	53562617	chunk0055_77_1	64.8774	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	53561829	53562915	-60801413	-	L1ME1	LINE	L1	-754	5392	4197	1
chr13	54365229	54365230	chunk0055_85_1	19.21134	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	54364324	54366265	-59998063	+	L1MDa	LINE	L1	3235	5236	-1301	1
chr13	54687464	54687465	chunk0055_87_1	52.3429	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	54686997	54691355	-59672973	+	LOR1-int	LTR	ERV1	340	4788	-3332	1
chr13	54764754	54764755	chunk0055_89_1	8.27376	AR_DHT_Control	chr13	54764663	54764775	-59599553	+	L1ME3	LINE	L1	5350	5468	-694	1
chr13	54891304	54891305	chunk0055_90_1	47.23969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	54891278	54891327	-59473001	+	U5	snRNA	snRNA	1	49	-67	1
chr13	56110861	56110862	chunk0055_99_1	33.8987	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	56110429	56110903	-58253425	-	L1M4	LINE	L1	-450	2704	1877	1
chr13	56163277	56163278	chunk0055_100_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	56163116	56163298	-58201030	+	L1MB8	LINE	L1	5996	6178	0	1
chr13	56408632	56408633	chunk0055_104_1	25.2918	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	56404377	56409746	-57954582	+	L1MA2	LINE	L1	2219	7718	-5	1
chr13	56706544	56706545	chunk0055_108_1	7.83221	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	56706323	56706653	-57657675	-	L1MC4	LINE	L1	-24	8018	7697	1
chr13	56769624	56769625	chunk0055_109_1	42.1781	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	56769400	56770001	-57594327	+	L1MC	LINE	L1	5177	5791	-542	1
chr13	57326243	57326244	chunk0055_115_1	32.5977	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	57326186	57326276	-57038052	-	Charlie4z	DNA	hAT-Charlie	-30	137	49	1
chr13	57394524	57394525	chunk0055_119_1	25.6623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	57394304	57395137	-56969191	+	L2	LINE	L2	1313	2177	-1242	1
chr13	57457622	57457623	chunk0055_123_1	6.48643	AR_DHT_Control	chr13	57457451	57458157	-56906171	-	L1MEg2	LINE	L1	-5497	955	2	1
chr13	58186052	58186053	chunk0055_130_1	11.1716	AR_DHT_Control	chr13	58185996	58186127	-56178201	-	MIRc	SINE	MIR	-97	171	37	1
chr13	59386777	59386778	chunk0055_134_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	59386642	59386854	-54977474	+	HAL1	LINE	L1	727	953	-1554	1
chr13	59471087	59471088	chunk0055_135_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	59469050	59473898	-54890430	+	L1MB1	LINE	L1	1064	5985	-681	1
chr13	59518606	59518607	chunk0055_137_1	11.1735	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	59518184	59518644	-54845684	-	HAL1	LINE	L1	-1148	1317	769	1
chr13	59541493	59541494	chunk0055_139_1	29.09927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	59541268	59541603	-54822725	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	1
chr13	59781185	59781186	chunk0055_147_1	15.1861	AR_DHT_Control	chr13	59781092	59781514	-54582814	+	HAL1	LINE	L1	1388	1808	-699	1
chr13	59914813	59914814	chunk0055_148_1	6.6833	AR_DHT_Control	chr13	59914423	59914939	-54449389	+	MLT1D	LTR	ERVL-MaLR	1	505	0	1
chr13	59946304	59946305	chunk0055_150_1	42.6436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	59946295	59946329	-54417999	-	MIRc	SINE	MIR	-17	251	218	1
chr13	60157602	60157603	chunk0055_157_1	7.36432	AR_DHT_Control	chr13	60157402	60158204	-54206124	-	L1MEb	LINE	L1	-5182	888	78	1
chr13	60175803	60175804	chunk0055_158_1	10.1791	AR_DHT_Control	chr13	60175737	60175931	-54188397	+	Tigger3c	DNA	TcMar-Tigger	407	602	0	1
chr13	60272462	60272463	chunk0055_159_1	9.21264	AR_DHT_Control	chr13	60272325	60272512	-54091816	+	L2c	LINE	L2	3077	3273	-114	1
chr13	60392418	60392419	chunk0055_163_1	8.15319	AR_DHT_Control	chr13	60391887	60392509	-53971819	-	LTR71B	LTR	ERV1	0	610	1	1
chr13	60413112	60413113	chunk0055_165_1	26.3803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	60413053	60413345	-53950983	+	Charlie13b	DNA	hAT-Charlie	87	375	-137	1
chr13	60517845	60517846	chunk0055_170_1	41.2341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	60517835	60518007	-53846321	+	MER5C1	DNA	hAT-Charlie	75	263	0	1
chr13	61128999	61129000	chunk0055_177_1	75.7852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	61128875	61129141	-53235187	-	Tigger12c	DNA	TcMar-Tigger	-435	299	24	1
chr13	61363013	61363014	chunk0055_181_1	22.9647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	61362761	61363016	-53001312	-	LTR40a	LTR	ERVL	-283	236	1	1
chr13	61463491	61463492	chunk0055_182_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	61463248	61463500	-52900828	+	L2c	LINE	L2	3107	3383	-4	1
chr13	61479335	61479336	chunk0055_184_1	91.4888	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	61478477	61482285	-52882043	-	L1PREC2	LINE	L1	-21	7160	2958	1
chr13	61628888	61628889	chunk0055_189_1	5.6425	AR_DHT_Control	chr13	61627110	61629440	-52734888	-	L1PA6	LINE	L1	-3830	2489	191	1
chr13	61665576	61665577	chunk0055_190_1	11.1716	AR_DHT_Control	chr13	61664994	61665651	-52698677	-	LTR18B	LTR	ERVL	-24	590	1	1
chr13	61783644	61783645	chunk0055_193_1	8.27376	AR_DHT_Control	chr13	61783612	61783831	-52580497	-	HAL1b	LINE	L1	-2189	232	1	1
chr13	61873792	61873793	chunk0055_196_1	6.48643	AR_DHT_Control	chr13	61873564	61874147	-52490181	-	MLT1E1A	LTR	ERVL-MaLR	0	680	14	1
chr13	61883277	61883278	chunk0055_198_1	12.30135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	61883087	61883454	-52480874	-	MLT1H1	LTR	ERVL-MaLR	-176	415	42	1
chr13	61937341	61937342	chunk0055_202_1	25.0625	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	61937192	61937993	-52426335	-	L1ME1	LINE	L1	-15	6164	5288	1
chr13	61950141	61950142	chunk0055_204_1	114.7636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	61950107	61950915	-52413413	-	HAL1M8	LINE	L1	-1603	1388	556	1
chr13	61995997	61995998	chunk0055_205_1	21.25069	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	61995441	61996156	-52368172	+	L2a	LINE	L2	2703	3416	-10	1
chr13	62103299	62103300	chunk0055_212_1	32.1994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	62102877	62103730	-52260598	-	L1MA8	LINE	L1	-3	6288	5465	1
chr13	62241535	62241536	chunk0055_215_1	38.7859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	62241226	62241839	-52122489	-	Tigger3b	DNA	TcMar-Tigger	-5	1226	584	1
chr13	62343330	62343331	chunk0055_217_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	62343090	62344454	-52019874	+	MER52A	LTR	ERV1	230	1755	0	1
chr13	62431701	62431702	chunk0055_219_1	6.06873	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	62431660	62431786	-51932542	-	L3	LINE	CR1	-629	3470	3354	1
chr13	62511033	62511034	chunk0055_222_1	20.9018	AR_DHT_Control	chr13	62508643	62513010	-51851318	-	L1PA16	LINE	L1	-1686	4797	551	1
chr13	62531772	62531773	chunk0055_225_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	62531545	62531790	-51832538	-	L1MEc	LINE	L1	-5545	855	603	1
chr13	62629707	62629708	chunk0055_226_1	17.3051	AR_DHT_Control	chr13	62629505	62629865	-51734463	-	LTR47A	LTR	ERVL	-65	387	1	1
chr13	62662385	62662386	chunk0055_227_1	11.0973	AR_DHT_Control	chr13	62662307	62662840	-51701488	-	L2a	LINE	L2	-281	3145	2548	1
chr13	62729458	62729459	chunk0055_232_1	44.4285	AR_DHT_Control	chr13	62728034	62730344	-51633984	-	L1PA6	LINE	L1	-3824	2322	5	1
chr13	62758924	62758925	chunk0055_233_1	12.1886	AR_DHT_Control	chr13	62757706	62761085	-51603243	+	L1MA9	LINE	L1	2881	6310	-2	1
chr13	62822202	62822203	chunk0055_236_1	15.16692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	62821031	62822242	-51542086	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	1
chr13	63018758	63018759	chunk0055_243_1	17.2892	AR_DHT_Control	chr13	63018223	63018798	-51345530	+	L1M4	LINE	L1	3205	3811	-2833	1
chr13	63066061	63066062	chunk0055_247_1	14.95107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	63066032	63066303	-51298025	+	L1MC5a	LINE	L1	2491	2777	0	1
chr13	63346057	63346058	chunk0055_255_1	58.1636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	63346024	63346390	-51017938	-	L2b	LINE	L2	-1101	2318	1933	1
chr13	63361624	63361625	chunk0055_256_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	63361577	63361766	-51002562	-	L1MA6	LINE	L1	0	6300	6110	1
chr13	63855600	63855601	chunk0055_268_1	15.3744	AR_DHT_Control	chr13	63855442	63855829	-50508499	+	MER70B	LTR	ERVL	34	446	-132	1
chr13	63926848	63926849	chunk0055_269_1	33.99538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	63926427	63927050	-50437278	+	L1M5	LINE	L1	4420	5073	-1073	1
chr13	64152115	64152116	chunk0055_271_1	44.7928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	64150055	64152260	-50212068	-	L1MA7	LINE	L1	-8	6283	4049	1
chr13	64457901	64457902	chunk0055_282_1	13.1034	AR_DHT_Control	chr13	64457746	64457996	-49906332	+	MIR	SINE	MIR	4	261	-1	1
chr13	64499143	64499144	chunk0055_284_1	17.66486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	64499034	64499479	-49864849	-	MER34D	LTR	ERV1	-9	570	135	1
chr13	64542706	64542707	chunk0055_286_1	11.57853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	64542580	64542868	-49821460	-	L2	LINE	L2	-2014	1405	1106	1
chr13	64720653	64720654	chunk0055_287_1	13.2288	AR_DHT_Control	chr13	64720414	64722370	-49641958	+	L1P3	LINE	L1	2491	4459	-1687	1
chr13	64764239	64764240	chunk0055_288_1	17.1871	AR_DHT_Control	chr13	64764167	64764651	-49599677	-	LTR40a	LTR	ERVL	0	519	3	1
chr13	65172916	65172917	chunk0055_291_1	15.31318	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	65172762	65172975	-49191353	-	MER58A	DNA	hAT-Charlie	-6	218	7	1
chr13	65228944	65228945	chunk0055_293_1	56.582	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	65228943	65229322	-49135006	-	L1MC5a	LINE	L1	-6	2771	2397	1
chr13	65324467	65324468	chunk0055_295_1	27.8739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	65324412	65324516	-49039812	-	MER103C	DNA	hAT-Charlie	-107	190	80	1
chr13	65471478	65471479	chunk0055_296_1	19.32884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	65471430	65471626	-48892702	+	MLT1J-int	LTR	ERVL-MaLR	132	342	-1045	1
chr13	65612461	65612462	chunk0055_297_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	65612362	65613049	-48751279	-	L1MB8	LINE	L1	-2073	4073	3434	1
chr13	65943146	65943147	chunk0055_299_1	56.561	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	65943137	65943285	-48421043	-	MamRTE1	LINE	RTE-BovB	-1464	2348	2213	1
chr13	66809713	66809714	chunk0055_311_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	66809687	66809826	-47554502	+	L2c	LINE	L2	3256	3386	-1	1
chr13	67453064	67453065	chunk0055_313_1	6.48643	AR_DHT_Control	chr13	67452274	67456207	-46908121	+	L1PA6	LINE	L1	1	3885	-2261	1
chr13	68067367	68067368	chunk0055_314_1	43.6475	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	68066923	68067373	-46296955	+	MER70A	LTR	ERVL	3	458	-14	1
chr13	68122387	68122388	chunk0055_316_1	24.6773	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	68122375	68122469	-46241859	+	MIR3	SINE	MIR	78	177	-31	1
chr13	68475743	68475744	chunk0055_319_1	10.1791	AR_DHT_Control	chr13	68475444	68475811	-45888517	+	MLT1D	LTR	ERVL-MaLR	1	453	-52	1
chr13	68663209	68663210	chunk0055_321_1	42.2977	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	68663199	68663379	-45700949	+	MIRc	SINE	MIR	56	248	-20	1
chr13	68778081	68778082	chunk0055_325_1	9.21264	AR_DHT_Control	chr13	68777925	68778259	-45586069	-	LTR80A	LTR	ERVL	0	583	226	1
chr13	68780433	68780434	chunk0055_326_1	23.64132	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	68780363	68780572	-45583756	-	LTR80A	LTR	ERVL	-361	222	1	1
chr13	68854435	68854436	chunk0055_328_1	63.8506	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	68854060	68854565	-45509763	-	MER68	LTR	ERVL	-38	525	1	1
chr13	68861117	68861118	chunk0055_329_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	68860444	68863825	-45500503	-	L1MA4A	LINE	L1	-613	6392	2944	1
chr13	69059444	69059445	chunk0055_335_1	7.36432	AR_DHT_Control	chr13	69059203	69059450	-45304878	+	L1MD3	LINE	L1	7725	7983	-12	1
chr13	69211369	69211370	chunk0055_336_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	69209733	69214609	-45149719	-	L1PA16	LINE	L1	-9	6625	1615	1
chr13	69941412	69941413	chunk0055_341_1	41.0341	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	69941076	69942066	-44422262	+	L1PB	LINE	L1	2601	3603	-2543	1
chr13	70068970	70068971	chunk0055_344_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	70068814	70069886	-44294442	+	L1MCa	LINE	L1	263	1518	-5233	1
chr13	70249443	70249444	chunk0055_349_1	11.757	AR_DHT_Control	chr13	70249227	70249445	-44114883	-	L2a	LINE	L2	-180	3246	3022	1
chr13	70389114	70389115	chunk0055_351_1	47.3266	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	70388677	70389194	-43975134	+	LTR108e_Mam	LTR	ERVL	8	545	-3	1
chr13	70391882	70391883	chunk0055_354_1	12.23117	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	70391584	70392046	-43972282	+	LTR22B1	LTR	ERVK	1	522	-4	1
chr13	70405391	70405392	chunk0055_356_1	39.7698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	70405287	70405578	-43958750	-	AluJo	SINE	Alu	-5	307	6	1
chr13	70580152	70580153	chunk0055_357_1	95.2232	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	70578700	70580534	-43783794	+	L1MD1	LINE	L1	4707	6559	-74	1
chr13	71285241	71285242	chunk0055_362_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	71284517	71287770	-43076558	-	L1M1	LINE	L1	-4273	3292	7	1
chr13	73617930	73617931	chunk0055_390_1	7.36432	AR_DHT_Control	chr13	73617722	73617949	-40746379	-	MIR	SINE	MIR	0	262	26	1
chr13	73667675	73667676	chunk0055_393_1	72.6454	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	73667144	73667694	-40696634	-	L1ME3Cz	LINE	L1	-1464	4682	4106	1
chr13	73977653	73977654	chunk0055_397_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	73977582	73979350	-40384978	+	L1MC1	LINE	L1	4603	6328	-5	1
chr13	74366028	74366029	chunk0055_405_1	11.64774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	74365924	74366046	-39998282	+	MIRb	SINE	MIR	11	121	-147	1
chr13	74433442	74433443	chunk0055_410_1	36.0213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	74433042	74434186	-39930142	+	MER97d	DNA	hAT-Tip100	16	1200	-5	1
chr13	74633743	74633744	chunk0055_412_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	74633439	74633984	-39730344	+	MLT2B1	LTR	ERVL	1	596	-5	1
chr13	74929582	74929583	chunk0055_418_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	74928943	74930085	-39434243	+	L1MB7	LINE	L1	4905	6164	-20	1
chr13	75370079	75370080	chunk0055_425_1	15.36905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	75369862	75371556	-38992772	-	L2a	LINE	L2	-91	3335	1457	1
chr13	75394889	75394890	chunk0055_426_1	48.0642	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	75394867	75394914	-38969414	-	L2b	LINE	L2	-5	3370	3324	1
chr13	75419967	75419968	chunk0055_428_1	6.01382	AR_DHT_Control	chr13	75419736	75420121	-38944207	-	L2b	LINE	L2	-4	3371	2952	1
chr13	75446321	75446322	chunk0055_430_1	17.80003	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	75446232	75446356	-38917972	-	L1MB5	LINE	L1	-6	6168	6044	1
chr13	75456071	75456072	chunk0055_433_1	8.02791	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	75455999	75456122	-38908206	-	FLAM_A	SINE	Alu	-12	130	1	1
chr13	75631904	75631905	chunk0055_440_1	7.36432	AR_DHT_Control	chr13	75631885	75632031	-38732297	-	L1ME4a	LINE	L1	-440	5684	5534	1
chr13	75643448	75643449	chunk0055_445_1	98.8599	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	75643416	75643486	-38720842	+	L2a	LINE	L2	3335	3426	0	1
chr13	75719905	75719906	chunk0055_448_1	4.75321	AR_DHT_Control	chr13	75719800	75720530	-38643798	-	L1MC1	LINE	L1	-640	5693	4952	1
chr13	77014016	77014017	chunk0056_5_1	18.0159	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	77013946	77014160	-37350168	-	L2c	LINE	L2	-92	3295	3085	1
chr13	77112900	77112901	chunk0056_12_1	4.67225	AR_DHT_Control	chr13	77112740	77113036	-37251292	+	L2c	LINE	L2	1673	1986	-1433	1
chr13	77143731	77143732	chunk0056_16_1	113.4732	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	77143652	77143973	-37220355	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	1
chr13	77167867	77167868	chunk0056_18_1	61.75462	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	77167439	77167874	-37196454	+	L1MC5a	LINE	L1	2276	2767	-10	1
chr13	77171823	77171824	chunk0056_21_1	13.6434	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	77171747	77171915	-37192413	-	L2a	LINE	L2	-141	3285	3094	1
chr13	77229121	77229122	chunk0056_23_1	23.2168	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	77229073	77229264	-37135064	+	MIRb	SINE	MIR	19	217	-51	1
chr13	77283226	77283227	chunk0056_28_1	11.804	AR_DHT_Control	chr13	77283168	77283285	-37081043	+	L2c	LINE	L2	2814	2939	-480	1
chr13	77290678	77290679	chunk0056_29_1	5.0408	AR_DHT_Control	chr13	77289934	77290852	-37073476	+	L1MD2	LINE	L1	5204	6151	-208	1
chr13	77292105	77292106	chunk0056_30_1	11.0699	AR_DHT_Control	chr13	77292074	77292353	-37071975	+	MER68	LTR	ERVL	237	527	-37	1
chr13	77312940	77312941	chunk0056_35_1	27.96553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	77312897	77313428	-37050900	+	L1MEf	LINE	L1	2614	3220	-2926	1
chr13	77356371	77356372	chunk0056_39_1	67.7185	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	77355976	77356420	-37007908	-	L1MC5a	LINE	L1	-441	2336	2039	1
chr13	77522609	77522610	chunk0056_46_1	97.039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	77522531	77522966	-36841362	-	L1PA11	LINE	L1	-35	6139	5704	1
chr13	78372867	78372868	chunk0056_59_1	31.604	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	78372538	78373036	-35991292	-	LTR26	LTR	ERV1	-75	528	1	1
chr13	78374514	78374515	chunk0056_62_1	38.0766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	78374480	78374605	-35989723	+	MLT1A	LTR	ERVL-MaLR	190	313	-77	1
chr13	78379497	78379498	chunk0056_63_1	6.62784	AR_DHT_Control	chr13	78378824	78379578	-35984750	-	L1MC4a	LINE	L1	-2444	5438	4630	1
chr13	79441897	79441898	chunk0056_71_1	74.46773	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	79441617	79442063	-34922265	+	LTR22A	LTR	ERVK	1	450	-8	1
chr13	79493135	79493136	chunk0056_74_1	22.22902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	79492737	79493203	-34871125	+	L2c	LINE	L2	2922	3387	0	1
chr13	79515054	79515055	chunk0056_78_1	49.7037	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	79514965	79515289	-34849039	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr13	79644653	79644654	chunk0056_81_1	9.21264	AR_DHT_Control	chr13	79644420	79644875	-34719453	-	Kanga11a	DNA	TcMar-Tc2	-277	452	1	1
chr13	79791519	79791520	chunk0056_82_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	79790799	79792259	-34572069	-	L1MA8	LINE	L1	-5346	1684	1	1
chr13	79950997	79950998	chunk0056_85_1	53.5191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	79950953	79951050	-34413278	+	L1MC3	LINE	L1	7184	7280	-505	1
chr13	79961401	79961402	chunk0056_86_1	90.3729	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	79959867	79964614	-34399714	+	L1PA7	LINE	L1	1775	6469	0	1
chr13	80486547	80486548	chunk0056_87_1	7.36432	AR_DHT_Control	chr13	80485261	80487172	-33877156	+	ERVL-B4-int	LTR	ERVL	1739	3703	-1964	1
chr13	81306170	81306171	chunk0056_88_1	10.1791	AR_DHT_Control	chr13	81306160	81306323	-33058005	-	MLT1I	LTR	ERVL-MaLR	-11	400	258	1
chr13	81874386	81874387	chunk0056_91_1	221.193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	81874356	81874459	-32489869	+	L1PB4	LINE	L1	5878	5978	-178	1
chr13	81988010	81988011	chunk0056_93_1	13.6789	AR_DHT_Control	chr13	81987714	81988115	-32376213	+	MER67C	LTR	ERV1	6	405	-306	1
chr13	82306650	82306651	chunk0056_96_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	82306636	82306685	-32057643	+	(AT)n	Simple_repeat	Simple_repeat	1	51	0	1
chr13	82354173	82354174	chunk0056_97_1	22.0454	AR_DHT_Control	chr13	82353586	82354232	-32010096	+	L1MA6	LINE	L1	5300	5937	-363	1
chr13	82436617	82436618	chunk0056_99_1	41.2572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	82436607	82436788	-31927540	-	HERVL40-int	LTR	ERVL	-27	5503	5305	1
chr13	82467831	82467832	chunk0056_100_1	17.2447	AR_DHT_Control	chr13	82467493	82469510	-31894818	-	L1MA2	LINE	L1	0	7723	5670	1
chr13	82470308	82470309	chunk0056_102_1	57.8935	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	82469545	82472323	-31892005	-	L1MA2	LINE	L1	-1896	5669	2902	1
chr13	82603098	82603099	chunk0056_105_1	8.27376	AR_DHT_Control	chr13	82602875	82603206	-31761122	-	L1MA8	LINE	L1	-137	6154	5821	1
chr13	82762163	82762164	chunk0056_110_1	47.55744	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	82760967	82763065	-31601263	+	L1PB4	LINE	L1	4404	6581	-291	1
chr13	82794959	82794960	chunk0056_112_1	14.3818	AR_DHT_Control	chr13	82794947	82795194	-31569134	+	L1ME3A	LINE	L1	5722	5994	-179	1
chr13	82938561	82938562	chunk0056_113_1	8.67138	AR_DHT_Control	chr13	82938197	82939171	-31425157	+	LTR2752	LTR	ERV1	89	1259	-4	1
chr13	83071130	83071131	chunk0056_124_1	85.2517	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	83070710	83071734	-31292594	-	L1PREC2	LINE	L1	-601	5565	4540	1
chr13	83125922	83125923	chunk0056_126_1	108.9465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	83125153	83126117	-31238211	+	L1MDb	LINE	L1	5111	6083	-536	1
chr13	83161849	83161850	chunk0056_129_1	14.2911	AR_DHT_Control	chr13	83161591	83161920	-31202408	+	Tigger3a	DNA	TcMar-Tigger	4	348	0	1
chr13	83166921	83166922	chunk0056_130_1	12.1886	AR_DHT_Control	chr13	83166816	83167693	-31196635	-	MER54A	LTR	ERVL	-7	894	1	1
chr13	83224082	83224083	chunk0056_133_1	10.1791	AR_DHT_Control	chr13	83223716	83224264	-31140064	-	L1MC1	LINE	L1	-297	6036	5485	1
chr13	83258968	83258969	chunk0056_137_1	20.8334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	83257647	83259238	-31105090	+	L1MB1	LINE	L1	4253	5946	-222	1
chr13	83344647	83344648	chunk0056_138_1	16.6858	AR_DHT_Control	chr13	83344083	83344920	-31019408	+	L1P4	LINE	L1	4550	5403	-743	1
chr13	83420302	83420303	chunk0056_139_1	13.2288	AR_DHT_Control	chr13	83420018	83420398	-30943930	-	L1PA16	LINE	L1	-13	6153	5770	1
chr13	83597341	83597342	chunk0056_142_1	12.8929	AR_DHT_Control	chr13	83596092	83598079	-30766249	-	L1PREC2	LINE	L1	-2808	5333	3360	1
chr13	84004034	84004035	chunk0056_148_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	84004014	84004049	-30360279	+	(TAGATA)n	Simple_repeat	Simple_repeat	1	35	0	1
chr13	84011105	84011106	chunk0056_150_1	55.1129	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	84011047	84011216	-30353112	-	L2	LINE	L2	-1241	2178	1993	1
chr13	84207266	84207267	chunk0056_154_1	17.6126	AR_DHT_Control	chr13	84206390	84207989	-30156339	-	L2a	LINE	L2	-939	2480	751	1
chr13	84668858	84668859	chunk0056_162_1	79.9391	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	84668737	84668915	-29695413	-	LFSINE_Vert	SINE	tRNA	-3	456	273	1
chr13	84697596	84697597	chunk0056_164_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	84696139	84699444	-29664884	+	L1PA10	LINE	L1	2369	5646	-707	1
chr13	84756894	84756895	chunk0056_165_1	16.3794	AR_DHT_Control	chr13	84756668	84757422	-29606906	-	L1MCa	LINE	L1	-5710	798	10	1
chr13	85184583	85184584	chunk0056_169_1	6.48643	AR_DHT_Control	chr13	85184426	85184731	-29179597	+	LTR78B	LTR	ERV1	269	604	-692	1
chr13	85228258	85228259	chunk0056_170_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	85228000	85228373	-29135955	+	MER45B	DNA	hAT-Tip100	4	409	-631	1
chr13	85236429	85236430	chunk0056_171_1	7.36432	AR_DHT_Control	chr13	85235097	85236549	-29127779	+	L1MC2	LINE	L1	4165	5748	-596	1
chr13	85373571	85373572	chunk0056_179_1	157.41057	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	85373563	85373643	-28990685	+	Charlie10	DNA	hAT-Charlie	1456	1535	-1287	1
chr13	85409619	85409620	chunk0056_181_1	3.69438	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	85409370	85410086	-28954242	+	LTR82A	LTR	ERVL	1	744	-128	1
chr13	85589688	85589689	chunk0056_187_1	5.6425	AR_DHT_Control	chr13	85589587	85589753	-28774575	+	MER58A	DNA	hAT-Charlie	54	224	0	1
chr13	85653893	85653894	chunk0056_191_1	17.32316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	85653876	85654156	-28710172	+	L2a	LINE	L2	2824	3123	-303	1
chr13	85812389	85812390	chunk0056_205_1	11.1716	AR_DHT_Control	chr13	85812269	85812611	-28551717	+	MLT2F	LTR	ERVL	307	661	-2	1
chr13	85985932	85985933	chunk0056_207_1	12.73	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	85985718	85986185	-28378143	-	L1ME3G	LINE	L1	-453	471	56	1
chr13	86080798	86080799	chunk0056_208_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	86079891	86080929	-28283399	-	L1MC5	LINE	L1	-1485	7819	6723	1
chr13	86082088	86082089	chunk0056_209_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	86081928	86082171	-28282157	-	L2a	LINE	L2	-491	2928	2694	1
chr13	86732416	86732417	chunk0056_213_1	58.0108	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	86730765	86733013	-27631315	+	L1MA4A	LINE	L1	718	2972	-4594	1
chr13	88116209	88116210	chunk0056_217_1	27.0065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	88116108	88116577	-26247751	+	LTR40a	LTR	ERVL	20	504	-15	1
chr13	88414783	88414784	chunk0056_222_1	73.8329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	88414645	88417020	-25947308	-	L1ME1	LINE	L1	-3239	2907	399	1
chr13	88659775	88659776	chunk0056_229_1	9.21264	AR_DHT_Control	chr13	88659768	88659897	-25704431	-	L1PA8	LINE	L1	0	6172	6046	1
chr13	88732050	88732051	chunk0056_230_1	5.47383	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	88731867	88732064	-25632264	-	LTR37B	LTR	ERV1	-90	378	193	1
chr13	88732687	88732688	chunk0056_232_1	81.6875	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	88732350	88732733	-25631595	-	LTR37-int	LTR	ERV1	-154	3906	3499	1
chr13	88857511	88857512	chunk0056_233_1	17.6003	AR_DHT_Control	chr13	88856398	88858078	-25506250	+	L1MB1	LINE	L1	4879	6606	-60	1
chr13	89046707	89046708	chunk0056_237_1	60.1927	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	89044375	89046869	-25317459	-	Tigger2	DNA	TcMar-Tigger	0	2718	202	1
chr13	89061967	89061968	chunk0056_239_1	15.96611	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	89060964	89062377	-25301951	-	L1PA16	LINE	L1	-4444	2409	994	1
chr13	89144097	89144098	chunk0056_242_1	65.341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	89144087	89144123	-25220205	+	(CA)n	Simple_repeat	Simple_repeat	1	36	0	1
chr13	89276445	89276446	chunk0056_245_1	28.20131	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	89276441	89276741	-25087587	-	MER58B	DNA	hAT-Charlie	0	341	27	1
chr13	89355731	89355732	chunk0056_250_1	10.1601	AR_DHT_Control	chr13	89355569	89355746	-25008582	-	MER45A	DNA	hAT-Tip100	0	178	1	1
chr13	89689317	89689318	chunk0056_254_1	47.0386	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	89688525	89690465	-24673863	+	L1M1	LINE	L1	13	1892	-5673	1
chr13	89799617	89799618	chunk0056_257_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	89798719	89800150	-24564178	-	L1PA16	LINE	L1	-1	6165	4725	1
chr13	89946293	89946294	chunk0056_260_1	11.1716	AR_DHT_Control	chr13	89946009	89946300	-24418028	-	AluSc8	SINE	Alu	-21	290	1	1
chr13	90027920	90027921	chunk0056_263_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	90026906	90028504	-24335824	+	THE1C-int	LTR	ERVL-MaLR	3	1631	0	1
chr13	90033553	90033554	chunk0056_264_1	36.9379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	90033504	90033659	-24330669	+	L1MB1	LINE	L1	6024	6168	0	1
chr13	90084086	90084087	chunk0056_268_1	38.8319	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	90084004	90084636	-24279692	+	L1ME1	LINE	L1	5494	6136	-43	1
chr13	90353008	90353009	chunk0056_276_1	19.8997	AR_DHT_Control	chr13	90352548	90353701	-24010627	+	L1MC1	LINE	L1	4	1155	-5353	1
chr13	90426347	90426348	chunk0056_284_1	18.22004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	90426073	90426424	-23937904	-	L1MCb	LINE	L1	-869	5695	5326	1
chr13	90432730	90432731	chunk0056_285_1	9.21264	AR_DHT_Control	chr13	90431763	90434597	-23929731	-	PRIMA4-int	LTR	ERV1	-3413	4857	2017	1
chr13	90447536	90447537	chunk0056_286_1	7.36432	AR_DHT_Control	chr13	90447071	90447787	-23916541	+	MER45C	DNA	hAT-Tip100	179	952	-1	1
chr13	90491329	90491330	chunk0056_289_1	22.9428	AR_DHT_Control	chr13	90490917	90491647	-23872681	-	L1MA6	LINE	L1	0	6300	5561	1
chr13	90659195	90659196	chunk0056_297_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	90658226	90659643	-23704685	+	L1PA12	LINE	L1	9	2484	-5119	1
chr13	90783385	90783386	chunk0056_300_1	21.0193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	90781956	90783447	-23580881	-	L1MA7	LINE	L1	-10	6281	4736	1
chr13	90798442	90798443	chunk0056_302_1	9.21264	AR_DHT_Control	chr13	90798441	90798583	-23565745	-	MIRc	SINE	MIR	-116	152	13	1
chr13	90834839	90834840	chunk0056_303_1	35.17708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	90834811	90834972	-23529356	+	MamRTE1	LINE	RTE-BovB	3225	3387	-425	1
chr13	91068466	91068467	chunk0056_316_1	6.43609	AR_DHT_Control	chr13	91068388	91068652	-23295676	-	L1MD	LINE	L1	-2203	3943	3657	1
chr13	91077499	91077500	chunk0056_318_1	46.0163	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	91077474	91077724	-23286604	+	MIRb	SINE	MIR	11	262	0	1
chr13	91110086	91110087	chunk0056_324_1	8.27376	AR_DHT_Control	chr13	91110007	91110198	-23254130	+	Tigger3a	DNA	TcMar-Tigger	158	347	-1	1
chr13	91168233	91168234	chunk0056_329_1	21.06127	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	91168232	91168314	-23196014	+	MIRb	SINE	MIR	177	264	-4	1
chr13	91203456	91203457	chunk0056_330_1	8.41215	AR_DHT_Control	chr13	91203456	91203658	-23160670	-	L2b	LINE	L2	-25	3401	3206	1
chr13	91211717	91211718	chunk0056_331_1	29.3516	AR_DHT_Control	chr13	91211714	91211838	-23152490	-	LTR85a	LTR	Gypsy?	-562	140	1	1
chr13	91226401	91226402	chunk0056_332_1	18.3087	AR_DHT_Control	chr13	91226383	91226610	-23137718	+	L1MB4	LINE	L1	5931	6176	-4	1
chr13	91278514	91278515	chunk0056_336_1	4.40478	AR_DHT_Control	chr13	91278290	91279263	-23085065	-	MER54A	LTR	ERVL	0	901	1	1
chr13	91338791	91338792	chunk0056_337_1	31.3642	AR_DHT_Control	chr13	91335520	91339463	-23024865	-	L1MA9	LINE	L1	-1836	5723	2002	1
chr13	91702127	91702128	chunk0056_347_1	20.63422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	91701594	91703969	-22660359	-	L1MA9	LINE	L1	-516	5796	3326	1
chr13	91955213	91955214	chunk0056_350_1	15.6721	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	91953952	91955337	-22408991	+	L1ME3	LINE	L1	3346	4751	-1395	1
chr13	91985395	91985396	chunk0056_351_1	15.5336	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	91984770	91985795	-22378533	-	L1MEg	LINE	L1	-3290	3029	1951	1
chr13	92035176	92035177	chunk0056_353_1	24.73	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	92035075	92035232	-22329096	+	AluYh3	SINE	Alu	143	299	-12	1
chr13	92903211	92903212	chunk0056_369_1	13.4959	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	92903153	92903343	-21460985	+	BLACKJACK	DNA	hAT-Blackjack	2511	2737	-232	1
chr13	93200749	93200750	chunk0056_382_1	69.0796	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	93199900	93201026	-21163302	+	L1PB4	LINE	L1	5017	6154	-2	1
chr13	93202228	93202229	chunk0056_384_1	69.3991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	93202213	93202871	-21161457	-	LTR37-int	LTR	ERV1	-3366	694	15	1
chr13	93319249	93319250	chunk0056_386_1	22.992	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	93318922	93319609	-21044719	+	HAL1	LINE	L1	423	1158	-1349	1
chr13	93713548	93713549	chunk0056_388_1	12.3389	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	93713518	93713593	-20650735	-	AluJr4	SINE	Alu	-30	282	208	1
chr13	93729615	93729616	chunk0056_389_1	5.73469	AR_DHT_Control	chr13	93729409	93730135	-20634193	+	L1ME3A	LINE	L1	5360	6166	-7	1
chr13	93746287	93746288	chunk0056_392_1	32.60787	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	93745525	93747861	-20616467	+	Tigger5	DNA	TcMar-Tigger	1	2406	0	1
chr13	94157942	94157943	chunk0056_407_1	76.3327	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	94157534	94157988	-20206340	-	L2	LINE	L2	-445	2974	2499	1
chr13	94305581	94305582	chunk0056_414_1	4.36845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	94305141	94305750	-20058578	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	1
chr13	94369964	94369965	chunk0056_415_1	12.58697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	94369956	94370035	-19994293	-	L2b	LINE	L2	0	3426	3350	1
chr13	94401176	94401177	chunk0056_417_1	5.90945	AR_DHT_Control	chr13	94401155	94401361	-19962967	-	L2a	LINE	L2	0	3426	3235	1
chr13	94455518	94455519	chunk0056_420_1	13.4475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	94455471	94455688	-19908640	+	MER58A	DNA	hAT-Charlie	5	224	0	1
chr13	94595126	94595127	chunk0056_423_1	6.48643	AR_DHT_Control	chr13	94594895	94595618	-19768710	-	L2a	LINE	L2	0	3426	2569	1
chr13	94642382	94642383	chunk0056_425_1	9.13774	AR_DHT_Control	chr13	94642367	94642412	-19721916	+	GA-rich	Low_complexity	Low_complexity	1	45	0	1
chr13	94850987	94850988	chunk0056_427_1	5.59693	AR_DHT_Control	chr13	94850971	94851085	-19513243	+	L2b	LINE	L2	3268	3375	0	1
chr13	94892273	94892274	chunk0056_428_1	7.36432	AR_DHT_Control	chr13	94892130	94892525	-19471803	+	MER57B2	LTR	ERV1	1	403	0	1
chr13	95233134	95233135	chunk0056_452_1	85.0363	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	95233114	95233241	-19131087	+	(TACAATG)n	Simple_repeat	Simple_repeat	1	128	0	1
chr13	95268249	95268250	chunk0056_457_1	147.7447	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	95268020	95269003	-19095325	+	LTR5_Hs	LTR	ERVK	1	968	0	1
chr13	95360485	95360486	chunk0056_465_1	21.26025	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	95360110	95360654	-19003674	-	MER41C	LTR	ERV1	0	521	1	1
chr13	95513307	95513308	chunk0057_7_1	39.0311	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	95513273	95513334	-18850994	-	L2b	LINE	L2	-19	3356	3291	1
chr13	95535489	95535490	chunk0057_8_1	21.47215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	95535140	95536122	-18828206	-	L2c	LINE	L2	-484	2935	1850	1
chr13	95593754	95593755	chunk0057_20_1	19.1389	AR_DHT_Control	chr13	95593597	95593789	-18770539	+	MIR	SINE	MIR	29	241	-21	1
chr13	95659774	95659775	chunk0057_29_1	79.0637	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	95659505	95659895	-18704433	+	MLT1C	LTR	ERVL-MaLR	53	464	-3	1
chr13	95703233	95703234	chunk0057_31_1	9.63462	AR_DHT_Control	chr13	95703021	95703664	-18660664	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	1
chr13	95831452	95831453	chunk0057_32_1	9.78588	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	95831433	95831786	-18532542	-	L1ME3G	LINE	L1	-334	590	193	1
chr13	96021123	96021124	chunk0057_37_1	12.64853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	96020827	96021285	-18343043	-	LTR40c	LTR	ERVL	-9	456	1	1
chr13	96248298	96248299	chunk0057_42_1	83.18207	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	96248084	96248821	-18115507	+	MERX	DNA	TcMar-Tigger	4	756	0	1
chr13	96292662	96292663	chunk0057_43_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	96292622	96292698	-18071630	-	L2a	LINE	L2	-13	3413	3277	1
chr13	96355684	96355685	chunk0057_44_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	96355426	96357566	-18006762	-	Tigger1	DNA	TcMar-Tigger	-1	2417	294	1
chr13	96728083	96728084	chunk0057_48_1	14.4596	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	96727761	96728143	-17636185	+	L2c	LINE	L2	2981	3387	0	1
chr13	97316650	97316651	chunk0057_53_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	97316000	97316981	-17047347	+	L2a	LINE	L2	2352	3425	-1	1
chr13	97576146	97576147	chunk0057_60_1	27.99296	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	97576011	97576184	-16788144	-	L1ME3G	LINE	L1	-1957	4189	4008	1
chr13	97798750	97798751	chunk0057_62_1	7.36432	AR_DHT_Control	chr13	97798738	97798832	-16565496	-	L1MA9	LINE	L1	-8	6304	6209	1
chr13	97889872	97889873	chunk0057_63_1	13.1449	AR_DHT_Control	chr13	97889778	97890211	-16474117	-	L2c	LINE	L2	-1	3386	2916	1
chr13	98004157	98004158	chunk0057_65_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	98004088	98004263	-16360065	-	Charlie10	DNA	hAT-Charlie	-77	186	1	1
chr13	98112003	98112004	chunk0057_66_1	10.1791	AR_DHT_Control	chr13	98111781	98112324	-16252004	+	MER68	LTR	ERVL	1	563	0	1
chr13	98330129	98330130	chunk0057_76_1	9.49153	AR_DHT_Control	chr13	98329777	98330334	-16033994	-	L2a	LINE	L2	-1	3425	2813	1
chr13	98463432	98463433	chunk0057_80_1	34.846	AR_DHT_Control	chr13	98463404	98463444	-15900884	+	(AACAG)n	Simple_repeat	Simple_repeat	1	40	0	1
chr13	98760583	98760584	chunk0057_90_1	8.27376	AR_DHT_Control	chr13	98760348	98760717	-15603611	+	LTR61	LTR	ERV1	224	559	0	1
chr13	98964081	98964082	chunk0057_98_1	11.5514	AR_DHT_Control	chr13	98964041	98964232	-15400096	-	L2c	LINE	L2	-1	3386	3169	1
chr13	99065895	99065896	chunk0057_106_1	6.7814	AR_DHT_Control	chr13	99065554	99065902	-15298426	+	L2c	LINE	L2	2991	3387	0	1
chr13	99094173	99094174	chunk0057_108_1	132.6662	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	99093976	99094188	-15270140	+	L1MC4a	LINE	L1	6671	6886	-1156	1
chr13	99098255	99098256	chunk0057_111_1	45.5148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	99098154	99098422	-15265906	+	L1MB7	LINE	L1	5780	6054	-130	1
chr13	99198725	99198726	chunk0057_113_1	9.54696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	99198463	99198834	-15165494	-	Charlie1a	DNA	hAT-Charlie	-280	1175	809	1
chr13	99224379	99224380	chunk0057_114_1	7.08133	AR_DHT_Control	chr13	99224042	99224410	-15139918	-	MLT1B	LTR	ERVL-MaLR	-2	388	1	1
chr13	99365133	99365134	chunk0057_122_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	99365039	99366106	-14998222	-	L1ME3Cz	LINE	L1	-2697	3449	2232	1
chr13	99411858	99411859	chunk0057_124_1	13.6122	AR_DHT_Control	chr13	99411839	99412284	-14952044	-	L1ME3A	LINE	L1	-391	5782	5302	1
chr13	99644459	99644460	chunk0057_131_1	47.4482	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	99644373	99645214	-14719114	-	L1MA3	LINE	L1	-5	6300	5460	1
chr13	99832104	99832105	chunk0057_137_1	35.3294	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	99831816	99832106	-14532222	-	Mam_R4	LINE	Dong-R4	-271	3538	3240	1
chr13	99941449	99941450	chunk0057_142_1	14.2911	AR_DHT_Control	chr13	99941276	99941614	-14422714	-	L1MC5a	LINE	L1	-1915	862	558	1
chr13	100068405	100068406	chunk0057_143_1	8.18895	AR_DHT_Control	chr13	100068384	100068634	-14295694	+	LTR40a	LTR	ERVL	1	287	-232	1
chr13	100068838	100068839	chunk0057_144_1	6.04605	AR_DHT_Control	chr13	100068674	100069019	-14295309	+	L1MC5a	LINE	L1	213	539	-2238	1
chr13	100270013	100270014	chunk0057_149_1	16.12813	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	100269856	100270084	-14094244	+	MLT1G	LTR	ERVL-MaLR	10	277	-302	1
chr13	100323179	100323180	chunk0057_152_1	12.1886	AR_DHT_Control	chr13	100323057	100323251	-14041077	-	MER58A	DNA	hAT-Charlie	-23	201	1	1
chr13	100377956	100377957	chunk0057_154_1	30.3447	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	100377793	100379396	-13984932	-	L1M2	LINE	L1	-3956	3610	2002	1
chr13	101922027	101922028	chunk0057_169_1	31.0587	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	101921647	101922117	-12442211	+	L2a	LINE	L2	2877	3426	0	1
chr13	102325903	102325904	chunk0057_173_1	11.1147	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	102325427	102325920	-12038408	+	L2a	LINE	L2	2928	3422	-4	1
chr13	102467023	102467024	chunk0057_176_1	56.0616	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	102466823	102467250	-11897078	+	L1MEg2	LINE	L1	370	827	-5625	1
chr13	102503520	102503521	chunk0057_179_1	191.2283	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	102503343	102503522	-11860806	+	MER5B	DNA	hAT-Charlie	2	174	-4	1
chr13	102823422	102823423	chunk0057_186_1	12.4942	AR_DHT_Control	chr13	102823315	102823516	-11540812	+	MIRb	SINE	MIR	47	265	-3	1
chr13	102824025	102824026	chunk0057_187_1	22.48433	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	102823957	102824163	-11540165	-	Charlie7	DNA	hAT-Charlie	-975	1637	1431	1
chr13	103297091	103297092	chunk0057_196_1	5.6425	AR_DHT_Control	chr13	103297025	103297493	-11066835	-	MER70A	LTR	ERVL	0	472	1	1
chr13	103817937	103817938	chunk0057_205_1	21.3054	AR_DHT_Control	chr13	103817806	103818221	-10546107	-	MLT1H	LTR	ERVL-MaLR	-66	483	1	1
chr13	103868298	103868299	chunk0057_209_1	36.9567	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	103867891	103868484	-10495844	+	L1MA4	LINE	L1	5698	6292	-8	1
chr13	103965824	103965825	chunk0057_211_1	5.6425	AR_DHT_Control	chr13	103965716	103966183	-10398145	-	L2c	LINE	L2	-7	3380	2910	1
chr13	104023829	104023830	chunk0057_216_1	9.58162	AR_DHT_Control	chr13	104023783	104024193	-10340135	-	MSTB	LTR	ERVL-MaLR	-5	421	1	1
chr13	104325135	104325136	chunk0057_229_1	114.6905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	104323757	104325348	-10038980	+	L2a	LINE	L2	1650	3423	-3	1
chr13	104374643	104374644	chunk0057_231_1	213.2464	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr13	104374622	104374686	-9989642	+	MIR	SINE	MIR	199	262	0	1
chr13	104389813	104389814	chunk0057_232_1	137.10973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	104389556	104390013	-9974315	-	LTR40a	LTR	ERVL	-2	517	1	1
chr13	104426917	104426918	chunk0057_235_1	32.7139	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	104426687	104427066	-9937262	-	L1MB7	LINE	L1	-201	5983	5562	1
chr13	104431977	104431978	chunk0057_236_1	11.2788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	104431560	104431993	-9932335	-	L1ME3F	LINE	L1	-382	5861	5385	1
chr13	104684025	104684026	chunk0057_247_1	30.2878	AR_DHT_Control	chr13	104683788	104684055	-9680273	+	L2a	LINE	L2	3156	3426	0	1
chr13	104993968	104993969	chunk0057_249_1	9.21264	AR_DHT_Control	chr13	104993712	104994132	-9370196	-	LTR16	LTR	ERVL	0	438	1	1
chr13	105165809	105165810	chunk0057_251_1	8.27376	AR_DHT_Control	chr13	105165499	105166119	-9198209	+	MER73	LTR	ERVL	6	630	-14	1
chr13	105172868	105172869	chunk0057_252_1	5.99997	AR_DHT_Control	chr13	105171542	105174091	-9190237	+	L1MA9	LINE	L1	3692	6311	-1	1
chr13	105255684	105255685	chunk0057_254_1	12.1886	AR_DHT_Control	chr13	105255591	105255730	-9108598	+	L2b	LINE	L2	2971	3113	-274	1
chr13	105449426	105449427	chunk0057_256_1	24.5351	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	105449375	105449702	-8914626	-	Charlie7	DNA	hAT-Charlie	-1522	1090	747	1
chr13	105962311	105962312	chunk0057_277_1	12.0416	AR_DHT_Control	chr13	105962297	105962411	-8401917	-	MamRep1527	LTR	LTR	-840	129	21	1
chr13	105991465	105991466	chunk0057_279_1	6.28518	AR_DHT_Control	chr13	105991038	105991488	-8372840	+	L2c	LINE	L2	2910	3371	-16	1
chr13	106182008	106182009	chunk0057_288_1	4.76708	AR_DHT_Control	chr13	106181640	106182233	-8182095	+	L1ME3G	LINE	L1	32	651	-273	1
chr13	106226328	106226329	chunk0057_289_1	10.1791	AR_DHT_Control	chr13	106224576	106226629	-8137699	+	Charlie25	DNA	hAT-Charlie	207	2355	-169	1
chr13	106424949	106424950	chunk0057_301_1	6.49378	AR_DHT_Control	chr13	106424926	106425233	-7939095	+	LTR107_Mam	LTR	LTR	155	442	-128	1
chr13	106550776	106550777	chunk0057_306_1	35.9292	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	106550596	106550856	-7813472	-	MLT1D	LTR	ERVL-MaLR	0	505	206	1
chr13	106704883	106704884	chunk0057_314_1	6.17841	AR_DHT_Control	chr13	106704611	106705010	-7659318	+	L2a	LINE	L2	2990	3426	0	1
chr13	106927635	106927636	chunk0057_328_1	26.9681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	106927552	106927645	-7436683	+	L2c	LINE	L2	3251	3343	-44	1
chr13	107875643	107875644	chunk0057_345_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	107874877	107877138	-6487190	+	L1PA15	LINE	L1	497	2809	-3976	1
chr13	108340631	108340632	chunk0057_351_1	106.5055	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	108340337	108341028	-6023300	+	MER67C	LTR	ERV1	1	711	0	1
chr13	108501735	108501736	chunk0057_352_1	18.38996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	108501652	108501846	-5862482	+	MER58C	DNA	hAT-Charlie	14	215	0	1
chr13	108643753	108643754	chunk0057_357_1	11.74304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	108643570	108643843	-5720485	-	L1ME1	LINE	L1	-297	5882	5628	1
chr13	109074491	109074492	chunk0057_371_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	109074316	109074568	-5289760	-	THE1D	LTR	ERVL-MaLR	0	381	113	1
chr13	109105048	109105049	chunk0057_372_1	37.05984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	109104806	109105085	-5259243	+	L2a	LINE	L2	3122	3400	-26	1
chr13	109231475	109231476	chunk0057_378_1	10.6593	AR_DHT_Control	chr13	109231418	109231595	-5132733	+	MIR3	SINE	MIR	6	194	-14	1
chr13	109278544	109278545	chunk0057_380_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	109278539	109278610	-5085718	-	MIR	SINE	MIR	-41	221	155	1
chr13	109462082	109462083	chunk0057_386_1	8.27376	AR_DHT_Control	chr13	109459043	109462489	-4901839	-	L1MA7	LINE	L1	0	7710	4149	1
chr13	109495053	109495054	chunk0057_387_1	49.249	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	109494975	109495077	-4869251	+	UCON65	Unknown	Unknown	11	109	-349	1
chr13	109564658	109564659	chunk0057_395_1	12.0277	SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	109564623	109564890	-4799438	-	L1MD	LINE	L1	-3399	2747	2452	1
chr13	109570615	109570616	chunk0057_396_1	93.2037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	109570418	109570625	-4793703	+	MIRc	SINE	MIR	11	236	-32	1
chr13	109649905	109649906	chunk0057_403_1	34.8494	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	109649895	109650049	-4714279	+	MER58A	DNA	hAT-Charlie	32	187	-37	1
chr13	109809652	109809653	chunk0057_411_1	5.56779	AR_DHT_Control	chr13	109809283	109809662	-4554666	-	L2b	LINE	L2	-4	3371	3002	1
chr13	109955797	109955798	chunk0057_416_1	17.41115	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	109955589	109956062	-4408266	+	MER67B	LTR	ERV1	1	401	-260	1
chr13	109985065	109985066	chunk0057_418_1	41.0355	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	109985040	109985362	-4378966	+	L1ME4a	LINE	L1	5566	5825	-299	1
chr13	110448873	110448874	chunk0057_432_1	8.15319	AR_DHT_Control	chr13	110448719	110448981	-3915347	-	MIRb	SINE	MIR	0	262	6	1
chr13	110475079	110475080	chunk0057_433_1	5.33602	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	110474554	110475083	-3889245	+	(CA)n	Simple_repeat	Simple_repeat	1	532	0	1
chr13	110560924	110560925	chunk0057_442_1	5.66854	AR_DHT_Control	chr13	110560909	110560953	-3803375	+	MIR	SINE	MIR	111	154	-108	1
chr13	110776793	110776794	chunk0057_447_1	34.002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	110776051	110776938	-3587390	-	L1MC4	LINE	L1	0	8042	7126	1
chr13	110802010	110802011	chunk0057_449_1	9.09887	AR_DHT_Control	chr13	110801564	110802523	-3561805	+	Charlie7	DNA	hAT-Charlie	55	1107	-1505	1
chr13	110810098	110810099	chunk0057_450_1	51.7873	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	110809986	110810500	-3553828	+	L1ME4b	LINE	L1	137	644	-248	1
chr13	110838014	110838015	chunk0058_388_1	157.5681	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	110837233	110838214	-3526114	-	LTR5B	LTR	ERVK	0	1002	1	1
chr13	111051337	111051338	chunk0058_390_1	9.25776	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	111051068	111051438	-3312890	+	(CACA)n	Simple_repeat	Simple_repeat	1	368	0	1
chr13	111247827	111247828	chunk0058_393_1	109.5779	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	111247668	111247883	-3116445	+	MER58A	DNA	hAT-Charlie	1	222	-2	1
chr13	111464825	111464826	chunk0058_398_1	14.41592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	111464783	111465589	-2898739	-	L1PA16	LINE	L1	-10	6156	5359	1
chr13	112078772	112078773	chunk0058_407_1	7.82111	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	112078608	112079188	-2285140	+	(TGTTG)n	Simple_repeat	Simple_repeat	1	592	0	1
chr13	112415047	112415048	chunk0058_410_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	112414711	112416262	-1948066	-	L1M1	LINE	L1	-5336	2229	16	1
chr13	112594693	112594694	chunk0058_414_1	14.03971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	112594512	112595201	-1769127	-	L1MDa	LINE	L1	-2932	3605	2878	1
chr13	112772012	112772013	chunk0058_419_1	5.50096	AR_DHT_Control	chr13	112771589	112772217	-1592111	-	LTR62	LTR	ERVL	0	709	1	1
chr13	113383369	113383370	chunk0058_438_1	14.2911	AR_DHT_Control	chr13	113383172	113384521	-979807	-	L1PB1	LINE	L1	-962	5900	4554	1
chr13	113423246	113423247	chunk0058_439_1	11.872	AR_DHT_Control	chr13	113423115	113423285	-941043	+	AluSx	SINE	Alu	142	311	-1	1
chr13	113437594	113437595	chunk0058_440_1	58.3617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	113437538	113437835	-926493	-	L1ME1	LINE	L1	-254	5925	5607	1
chr13	113449865	113449866	chunk0058_442_1	5.80103	SRA057177_Lncap_AR_DHT_10nm_4hr	chr13	113449855	113450069	-914259	+	MIR	SINE	MIR	15	241	-21	1
chr13	113868849	113868850	chunk0058_449_1	21.92979	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr13	113868560	113869354	-494974	-	L1ME1	LINE	L1	-957	5362	4557	1
chr13	113869864	113869865	chunk0058_451_1	57.21707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr13	113869645	113870540	-493788	-	L1ME1	LINE	L1	-1763	4556	3640	1
chr13	113870908	113870909	chunk0058_452_1	14.0614	AR_DHT_Control	chr13	113870824	113870957	-493371	-	L1ME1	LINE	L1	-2680	3639	3518	1
chr14	16093417	16093418	chunk0058_1_1	12.7474	Merged_Lncap_AR_Veh	chr14	16091798	16096530	-90947188	+	SAR	Satellite	Satellite	1	4638	0	1
chr14	16096033	16096034	chunk0058_2_1	13.6836	Merged_Lncap_AR_Veh	chr14	16091798	16096530	-90947188	+	SAR	Satellite	Satellite	1	4638	0	1
chr14	18592637	18592638	chunk0058_3_1	23.3399	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	18592624	18593638	-88450080	+	L1M2	LINE	L1	3029	4037	-2106	1
chr14	18675279	18675280	chunk0058_11_1	61.6449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	18674256	18675436	-88368282	+	L1MEh	LINE	L1	60	1354	-881	1
chr14	19172047	19172048	chunk0058_15_1	13.9612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	19171810	19172835	-87870883	+	L1M2	LINE	L1	3024	4037	-2106	1
chr14	19725223	19725224	chunk0058_18_1	90.4542	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	19725152	19727097	-87316621	-	L1MA3	LINE	L1	0	7724	4418	1
chr14	19726919	19726920	chunk0058_19_1	8.55599	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	19725152	19727097	-87316621	-	L1MA3	LINE	L1	0	7724	4418	1
chr14	19771351	19771352	chunk0058_20_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	19770890	19771845	-87271873	+	LTR27E	LTR	ERV1	1	1077	0	1
chr14	19942048	19942049	chunk0058_28_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	19941450	19942227	-87101491	+	L1M2a	LINE	L1	402	1205	-6361	1
chr14	19954139	19954140	chunk0058_29_1	39.39629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	19954016	19954141	-87089577	+	L2a	LINE	L2	3088	3240	-186	1
chr14	19965361	19965362	chunk0058_31_1	17.6003	AR_DHT_Control	chr14	19965278	19965473	-87078245	+	L1MB7	LINE	L1	2877	3050	-3594	1
chr14	20081232	20081233	chunk0058_34_1	25.1592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	20079684	20081265	-86962453	+	L1PA16	LINE	L1	4573	6159	-7	1
chr14	20167184	20167185	chunk0058_36_1	117.88939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	20167040	20167774	-86875944	+	L1ME1	LINE	L1	5675	6177	-2	1
chr14	20180528	20180529	chunk0058_40_1	38.08448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	20180254	20180763	-86862955	-	MER67C	LTR	ERV1	0	711	154	1
chr14	20213704	20213705	chunk0058_44_1	9.21264	AR_DHT_Control	chr14	20213465	20215134	-86828584	-	L1MA7	LINE	L1	-153	6138	4459	1
chr14	20565387	20565388	chunk0058_53_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	20565187	20566730	-86476988	+	L1MA4	LINE	L1	3870	5439	-861	1
chr14	20627567	20627568	chunk0058_59_1	5.70484	AR_DHT_Control	chr14	20627431	20628034	-86415684	+	LTR24B	LTR	ERV1	10	571	-5	1
chr14	20628986	20628987	chunk0058_60_1	9.78454	AR_DHT_Control	chr14	20628912	20629660	-86414058	-	L1MC1	LINE	L1	-6	6327	5562	1
chr14	20637071	20637072	chunk0058_61_1	12.36615	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	20636715	20637073	-86406645	+	L1PB2	LINE	L1	5781	6151	0	1
chr14	20715635	20715636	chunk0058_64_1	10.0039	AR_DHT_Control	chr14	20715188	20715682	-86328036	-	LTR10A	LTR	ERV1	-64	545	3	1
chr14	20894293	20894294	chunk0058_68_1	96.9072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	20894027	20894414	-86149304	-	L2a	LINE	L2	0	3426	3034	1
chr14	21085403	21085404	chunk0058_73_1	5.44741	AR_DHT_Control	chr14	21085393	21085520	-85958198	+	MIR3	SINE	MIR	4	140	-68	1
chr14	21305471	21305472	chunk0058_81_1	6.29634	AR_DHT_Control	chr14	21305101	21305550	-85738168	-	L1MC1	LINE	L1	-218	6115	5658	1
chr14	21308438	21308439	chunk0058_83_1	10.98352	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	21308363	21308562	-85735156	-	L2c	LINE	L2	0	3387	3152	1
chr14	21449350	21449351	chunk0058_86_1	7.36432	AR_DHT_Control	chr14	21449256	21449403	-85594315	+	MIRb	SINE	MIR	97	268	0	1
chr14	21557566	21557567	chunk0058_90_1	19.54252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	21557523	21557692	-85486026	+	UCON105	Unknown	Unknown	79	264	-9	1
chr14	21592645	21592646	chunk0058_92_1	116.17357	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	21591875	21593086	-85450632	+	L1MA4	LINE	L1	3319	4458	-3104	1
chr14	21703503	21703504	chunk0058_101_1	16.06868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	21703458	21703555	-85340163	+	MIRc	SINE	MIR	49	143	-125	1
chr14	21856337	21856338	chunk0058_108_1	5.46037	AR_DHT_Control	chr14	21856180	21856588	-85187130	-	L1PA17	LINE	L1	0	6166	5741	1
chr14	21993219	21993220	chunk0058_112_1	22.09847	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	21993174	21993301	-85050417	+	L2b	LINE	L2	3242	3371	-4	1
chr14	22057226	22057227	chunk0058_113_1	12.1147	AR_DHT_Control	chr14	22056461	22058108	-84985610	+	L1PA16	LINE	L1	4389	6164	-2	1
chr14	22213299	22213300	chunk0058_114_1	11.0973	AR_DHT_Control	chr14	22213178	22213383	-84830335	+	Tigger3c	DNA	TcMar-Tigger	364	601	-1	1
chr14	22296243	22296244	chunk0058_122_1	55.8315	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	22296190	22296422	-84747296	-	Charlie2a	DNA	hAT-Charlie	-2520	341	78	1
chr14	22334172	22334173	chunk0058_124_1	82.27913	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	22333874	22334387	-84709331	-	LTR106_Mam	LTR	LTR	-184	524	1	1
chr14	22561279	22561280	chunk0058_132_1	42.5761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	22561250	22561339	-84482379	-	MIRb	SINE	MIR	-169	99	1	1
chr14	22871270	22871271	chunk0058_139_1	36.6021	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	22871231	22871353	-84172365	-	L2c	LINE	L2	0	3387	3273	1
chr14	23193610	23193611	chunk0058_153_1	9.74833	AR_DHT_Control	chr14	23193125	23193756	-83849962	+	HAL1	LINE	L1	1487	2172	-335	1
chr14	23235577	23235578	chunk0058_154_1	16.26424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	23235368	23236233	-83807485	+	Charlie1a	DNA	hAT-Charlie	417	1275	-180	1
chr14	23254681	23254682	chunk0058_158_1	12.48891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	23254564	23254693	-83789025	-	AluSz6	SINE	Alu	-183	129	1	1
chr14	23255271	23255272	chunk0058_159_1	4.27166	AR_DHT_Control	chr14	23254930	23255341	-83788377	+	LTR54	LTR	ERV1	5	510	0	1
chr14	23301659	23301660	chunk0058_161_1	8.46955	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	23301598	23301665	-83742053	+	(GGAAGGC)n	Simple_repeat	Simple_repeat	1	72	0	1
chr14	23328892	23328893	chunk0058_165_1	82.2893	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	23328719	23328990	-83714728	+	L2c	LINE	L2	3010	3298	-89	1
chr14	23689711	23689712	chunk0058_172_1	127.6723	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	23689651	23690689	-83353029	-	L1P2	LINE	L1	-5158	1199	175	1
chr14	23895133	23895134	chunk0058_176_1	27.987	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	23895070	23895332	-83148386	+	LTR43B	LTR	ERV1	215	572	0	1
chr14	23914156	23914157	chunk0058_177_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	23913736	23914189	-83129529	-	LTR33	LTR	ERVL	-2	513	1	1
chr14	23977340	23977341	chunk0058_181_1	11.1716	AR_DHT_Control	chr14	23977229	23977368	-83066350	+	MER102a	DNA	hAT-Charlie	71	208	-122	1
chr14	24116414	24116415	chunk0058_185_1	8.36735	AR_DHT_Control	chr14	24116335	24116540	-82927178	-	AluJo	SINE	Alu	-1	311	119	1
chr14	24273790	24273791	chunk0058_191_1	10.7608	AR_DHT_Control	chr14	24273736	24274007	-82769711	+	MIR	SINE	MIR	2	246	-16	1
chr14	24396459	24396460	chunk0058_194_1	27.6653	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	24396320	24396528	-82647190	-	LTR88b	LTR	Gypsy?	-625	212	9	1
chr14	24403529	24403530	chunk0058_196_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	24402806	24403539	-82640179	-	HAL1	LINE	L1	-1	2506	1675	1
chr14	24442313	24442314	chunk0058_197_1	17.4534	AR_DHT_Control	chr14	24442281	24442326	-82601392	+	(GCCCC)n	Simple_repeat	Simple_repeat	1	45	0	1
chr14	24541756	24541757	chunk0058_198_1	18.3087	AR_DHT_Control	chr14	24541118	24541943	-82501775	+	L1PA15	LINE	L1	5333	6158	-7	1
chr14	24908514	24908515	chunk0058_206_1	7.11634	AR_DHT_Control	chr14	24907785	24908645	-82135073	+	L2	LINE	L2	2148	3081	-338	1
chr14	24934475	24934476	chunk0058_208_1	26.31567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	24933986	24934773	-82108945	+	HAL1b	LINE	L1	1072	1894	-527	1
chr14	25013983	25013984	chunk0058_218_1	52.4037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	25013503	25014209	-82029509	+	L1MC5	LINE	L1	8588	9300	-4	1
chr14	25081839	25081840	chunk0058_223_1	22.27273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	25081828	25081959	-81961759	+	L1ME3A	LINE	L1	6032	6166	-7	1
chr14	25112934	25112935	chunk0058_225_1	5.9324	AR_DHT_Control	chr14	25112598	25113041	-81930677	+	MLT1J	LTR	ERVL-MaLR	51	512	0	1
chr14	25193794	25193795	chunk0058_226_1	38.7746	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	25193337	25193851	-81849867	-	LTR40a	LTR	ERVL	0	519	1	1
chr14	25212771	25212772	chunk0058_228_1	17.25238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	25212673	25212867	-81830851	-	L1ME3	LINE	L1	-1	6178	5978	1
chr14	25304101	25304102	chunk0058_230_1	9.21264	AR_DHT_Control	chr14	25303203	25304548	-81739170	+	L1PREC2	LINE	L1	2465	3809	-2957	1
chr14	25457804	25457805	chunk0058_232_1	4.84918	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	25457630	25457821	-81585897	+	MER58C	DNA	hAT-Charlie	1	211	-4	1
chr14	25590148	25590149	chunk0058_242_1	20.50922	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	25590072	25590235	-81453483	-	L1MC	LINE	L1	-1487	4659	4497	1
chr14	25659257	25659258	chunk0058_247_1	36.2706	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	25659154	25659416	-81384302	-	LTR80B	LTR	ERVL	-236	348	67	1
chr14	25681707	25681708	chunk0058_253_1	49.1669	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	25681489	25681714	-81362004	+	MIR	SINE	MIR	27	257	-5	1
chr14	25884188	25884189	chunk0058_259_1	4.40478	AR_DHT_Control	chr14	25883910	25884562	-81159156	-	L2b	LINE	L2	-756	2663	1954	1
chr14	26012052	26012053	chunk0058_265_1	7.97574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	26009408	26012124	-81031594	+	L1MA3	LINE	L1	16	3497	-4068	1
chr14	26059669	26059670	chunk0058_267_1	5.81334	AR_DHT_Control	chr14	26059491	26060057	-80983661	-	L2-3_Crp	LINE	L2	-1013	1083	516	1
chr14	26101601	26101602	chunk0058_270_1	14.52604	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	26101328	26101699	-80942019	+	MLT1I	LTR	ERVL-MaLR	41	411	0	1
chr14	26317872	26317873	chunk0058_277_1	14.3818	AR_DHT_Control	chr14	26317558	26318383	-80725335	-	L1M7	LINE	L1	-4313	1998	1164	1
chr14	26727654	26727655	chunk0058_286_1	17.3051	AR_DHT_Control	chr14	26727550	26727983	-80315735	-	Charlie15b	DNA	hAT-Charlie	-436	625	162	1
chr14	26848662	26848663	chunk0058_292_1	14.0944	AR_DHT_Control	chr14	26848095	26849483	-80194235	+	L1MEg	LINE	L1	804	2246	-3900	1
chr14	26946289	26946290	chunk0058_298_1	25.04157	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	26946103	26946656	-80097062	-	MLT1N2	LTR	ERVL-MaLR	0	562	5	1
chr14	26992668	26992669	chunk0058_302_1	20.7149	AR_DHT_Control	chr14	26992463	26992681	-80051037	-	MLT2B4	LTR	ERVL	-326	230	1	1
chr14	26995258	26995259	chunk0058_303_1	6.40219	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	26993385	26995968	-80047750	-	ERVL-B4-int	LTR	ERVL	-439	5275	2651	1
chr14	27251912	27251913	chunk0058_310_1	7.36432	AR_DHT_Control	chr14	27251875	27252025	-79791693	-	L1MEb	LINE	L1	-5907	163	24	1
chr14	27544755	27544756	chunk0058_316_1	23.29436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	27544603	27544872	-79498846	+	L1MC1	LINE	L1	6037	6318	-15	1
chr14	27573146	27573147	chunk0058_318_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	27572641	27576187	-79467531	+	L1PA15	LINE	L1	1	3545	-2938	1
chr14	27682311	27682312	chunk0058_321_1	37.84109	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	27682266	27682621	-79361097	+	THE1B	LTR	ERVL-MaLR	1	362	-2	1
chr14	27739986	27739987	chunk0058_323_1	8.27376	AR_DHT_Control	chr14	27739918	27740104	-79303614	+	Tigger1	DNA	TcMar-Tigger	2248	2418	0	1
chr14	28629440	28629441	chunk0058_328_1	6.73207	AR_DHT_Control	chr14	28629163	28629462	-78414256	-	L4_A_Mam	LINE	RTE-X	-2	4988	4689	1
chr14	28653106	28653107	chunk0058_329_1	10.3842	AR_DHT_Control	chr14	28653079	28653148	-78390570	-	L2b	LINE	L2	-304	3071	3001	1
chr14	28659691	28659692	chunk0058_330_1	27.96594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	28659497	28659841	-78383877	-	MER70B	LTR	ERVL	-128	450	14	1
chr14	28679117	28679118	chunk0058_335_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	28678981	28679197	-78364521	-	MER58A	DNA	hAT-Charlie	-3	221	2	1
chr14	28703605	28703606	chunk0058_338_1	10.1791	AR_DHT_Control	chr14	28703531	28703803	-78339915	+	ERV3-16A3_I-int	LTR	ERVL	272	543	-5124	1
chr14	28847938	28847939	chunk0058_342_1	12.1886	AR_DHT_Control	chr14	28846051	28851375	-78192343	+	L1PA6	LINE	L1	829	6154	0	1
chr14	28949786	28949787	chunk0058_354_1	151.0947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr14	28949519	28950623	-78093095	-	L1PA10	LINE	L1	-641	5527	4416	1
chr14	28959393	28959394	chunk0058_359_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	28955834	28960275	-78083443	+	L1PA7	LINE	L1	1950	6469	0	1
chr14	28982447	28982448	chunk0058_363_1	55.8025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	28982410	28984123	-78059595	+	L1PREC2	LINE	L1	4445	6158	-2	1
chr14	29198515	29198516	chunk0058_370_1	13.5936	AR_DHT_Control	chr14	29198311	29198542	-77845176	-	Tigger19b	DNA	TcMar-Tigger	-215	335	88	1
chr14	29199949	29199950	chunk0058_372_1	21.51447	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	29199871	29200020	-77843698	-	L2	LINE	L2	-898	2521	2372	1
chr14	29654731	29654732	chunk0059_3_1	22.8471	AR_DHT_Control	chr14	29654640	29654733	-77388985	+	L2a	LINE	L2	3260	3365	-61	1
chr14	29734478	29734479	chunk0059_7_1	148.776	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	29734339	29735108	-77308610	-	L1MEc	LINE	L1	-5549	851	59	1
chr14	29757361	29757362	chunk0059_13_1	8.79298	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	29757285	29757467	-77286251	-	L2c	LINE	L2	-94	3281	3067	1
chr14	29820386	29820387	chunk0059_22_1	7.9784	AR_DHT_Control	chr14	29820220	29820640	-77223078	-	L2c	LINE	L2	-8	3379	2972	1
chr14	29846634	29846635	chunk0059_28_1	7.94333	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	29846114	29846903	-77196815	-	L2a	LINE	L2	0	3426	2559	1
chr14	29895759	29895760	chunk0059_32_1	17.52495	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	29895369	29896109	-77147609	+	L2a	LINE	L2	2659	3426	0	1
chr14	29905860	29905861	chunk0059_36_1	24.39348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	29905560	29905921	-77137797	-	L4_A_Mam	LINE	RTE-X	-4409	581	155	1
chr14	29985664	29985665	chunk0059_46_1	19.62412	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	29985510	29985712	-77058006	+	MIRb	SINE	MIR	37	260	-8	1
chr14	29992109	29992110	chunk0059_49_1	15.3003	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	29991510	29992432	-77051286	+	L1ME3A	LINE	L1	4376	5444	-718	1
chr14	30014200	30014201	chunk0059_50_1	6.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	30013993	30014438	-77029280	-	LTR16A1	LTR	ERVL	0	456	4	1
chr14	30028321	30028322	chunk0059_51_1	26.6033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	30028152	30028681	-77015037	-	L1PA11	LINE	L1	-733	5441	4906	1
chr14	30142390	30142391	chunk0059_53_1	19.08	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	30142168	30142611	-76901107	+	MLT1C	LTR	ERVL-MaLR	7	467	0	1
chr14	30430055	30430056	chunk0059_70_1	15.2809	AR_DHT_Control	chr14	30429845	30430114	-76613604	-	MER103C	DNA	hAT-Charlie	-1	296	1	1
chr14	30494837	30494838	chunk0059_73_1	9.06816	AR_DHT_Control	chr14	30494736	30495169	-76548549	+	L2b	LINE	L2	2915	3355	-32	1
chr14	30496314	30496315	chunk0059_74_1	10.788	AR_DHT_Control	chr14	30496309	30496991	-76546727	+	HAL1	LINE	L1	102	851	-1656	1
chr14	30503963	30503964	chunk0059_76_1	111.83103	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	30503757	30503985	-76539733	+	Tigger20a	DNA	TcMar-Tigger	119	360	-613	1
chr14	30779351	30779352	chunk0059_88_1	20.2615	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	30779288	30779510	-76264208	+	MER58A	DNA	hAT-Charlie	1	221	-3	1
chr14	30842667	30842668	chunk0059_89_1	14.24292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	30842666	30842881	-76200837	-	MIRb	SINE	MIR	-16	252	21	1
chr14	30852614	30852615	chunk0059_91_1	9.93187	AR_DHT_Control	chr14	30852514	30852753	-76190965	-	MamRep1527	LTR	LTR	-94	875	675	1
chr14	30899102	30899103	chunk0059_92_1	81.19348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	30899071	30899182	-76144536	+	L2a	LINE	L2	3300	3426	0	1
chr14	30958140	30958141	chunk0059_100_1	97.6716	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	30958104	30958336	-76085382	+	AluJo	SINE	Alu	75	309	-3	1
chr14	31065363	31065364	chunk0059_107_1	68.68303	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	31065294	31065560	-75978158	+	L2c	LINE	L2	3106	3387	0	1
chr14	31396023	31396024	chunk0059_119_1	61.87607	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	31395869	31396070	-75647648	+	MIRb	SINE	MIR	5	260	-8	1
chr14	31811898	31811899	chunk0059_130_1	59.4024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	31806624	31812769	-75230949	-	L1PA6	LINE	L1	-5	6322	178	1
chr14	31827535	31827536	chunk0059_131_1	75.7126	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	31827200	31828713	-75215005	-	L4_A_Mam	LINE	RTE-X	-119	4871	3400	1
chr14	31889507	31889508	chunk0059_134_1	5.6425	AR_DHT_Control	chr14	31889295	31889819	-75153899	-	L1MC5	LINE	L1	-412	8892	8356	1
chr14	31894928	31894929	chunk0059_135_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	31894909	31895080	-75148638	+	LTR33	LTR	ERVL	338	510	-5	1
chr14	31927844	31927845	chunk0059_137_1	82.41626	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	31927543	31928095	-75115623	+	L2a	LINE	L2	2813	3426	0	1
chr14	32110012	32110013	chunk0059_149_1	139.6317	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	32109778	32110093	-74933625	-	L1M6	LINE	L1	-4754	1742	1409	1
chr14	32282176	32282177	chunk0059_159_1	9.39801	AR_DHT_Control	chr14	32281964	32282596	-74761122	+	L1MB7	LINE	L1	5415	6047	-137	1
chr14	32393305	32393306	chunk0059_165_1	86.3177	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	32391901	32393690	-74650028	+	L1MC4a	LINE	L1	6043	7882	0	1
chr14	32604840	32604841	chunk0059_179_1	93.8055	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	32604824	32605115	-74438603	-	L1PA10	LINE	L1	-11	6157	5864	1
chr14	32756758	32756759	chunk0059_187_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	32755800	32757328	-74286390	-	L1MA8	LINE	L1	-4967	2522	462	1
chr14	33439211	33439212	chunk0059_199_1	29.09136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	33439113	33439240	-73604478	-	MIRc	SINE	MIR	-43	225	107	1
chr14	33464715	33464716	chunk0059_203_1	13.78825	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	33464639	33464892	-73578826	-	MamRTE1	LINE	RTE-BovB	-48	3764	3501	1
chr14	34226295	34226296	chunk0059_227_1	79.6723	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	34225778	34226501	-72817217	-	HAL1b	LINE	L1	-185	2236	1422	1
chr14	34549152	34549153	chunk0059_239_1	228.7352	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	34549071	34549243	-72494475	+	MER67C	LTR	ERV1	146	291	-420	1
chr14	34677028	34677029	chunk0059_241_1	11.1716	AR_DHT_Control	chr14	34676945	34677139	-72366579	-	MIRb	SINE	MIR	-6	262	24	1
chr14	35068374	35068375	chunk0059_251_1	11.4842	AR_DHT_Control	chr14	35068359	35068709	-71975009	+	LTR33	LTR	ERVL	13	362	-153	1
chr14	35174473	35174474	chunk0059_257_1	86.5544	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	35174366	35174553	-71869165	+	L2a	LINE	L2	3214	3424	-2	1
chr14	35201391	35201392	chunk0059_258_1	42.374	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	35200692	35201618	-71842100	-	L1MC3	LINE	L1	0	7785	6818	1
chr14	35354048	35354049	chunk0059_270_1	12.3743	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	35353804	35354147	-71689571	+	L1ME3G	LINE	L1	159	526	-398	1
chr14	35747655	35747656	chunk0059_288_1	22.2669	AR_DHT_Control	chr14	35747620	35747757	-71295961	+	MIR3	SINE	MIR	4	141	-67	1
chr14	35803112	35803113	chunk0059_290_1	82.25225	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	35802982	35803635	-71240083	+	L1ME1	LINE	L1	4633	5278	-868	1
chr14	35826862	35826863	chunk0059_292_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	35826846	35826873	-71216845	+	(CGGGG)n	Simple_repeat	Simple_repeat	1	27	0	1
chr14	35854913	35854914	chunk0059_293_1	23.01534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	35854657	35855012	-71188706	-	L1MEd	LINE	L1	-6293	810	428	1
chr14	35929321	35929322	chunk0059_297_1	446.7001	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	35928372	35929859	-71113859	+	L1ME1	LINE	L1	4552	6157	-7	1
chr14	35944472	35944473	chunk0059_299_1	3.53185	AR_DHT_Control	chr14	35944346	35944652	-71099066	-	Charlie7	DNA	hAT-Charlie	-1198	1414	1073	1
chr14	35950019	35950020	chunk0059_300_1	12.79032	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	35949989	35950211	-71093507	+	UCON105	Unknown	Unknown	42	254	-19	1
chr14	36062449	36062450	chunk0059_302_1	10.7301	AR_DHT_Control	chr14	36062355	36062855	-70980863	+	LTR33C	LTR	ERVL	13	628	0	1
chr14	36401327	36401328	chunk0059_312_1	25.5883	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	36401298	36401444	-70642274	-	L4_A_Mam	LINE	RTE-X	-590	4400	4254	1
chr14	36410228	36410229	chunk0059_313_1	15.8739	AR_DHT_Control	chr14	36409417	36411729	-70631989	+	L1P2	LINE	L1	1	2332	-3814	1
chr14	36430964	36430965	chunk0059_316_1	151.2848	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	36430957	36431012	-70612706	+	Charlie19a	DNA	hAT-Charlie	280	337	-49	1
chr14	36470988	36470989	chunk0059_318_1	24.30961	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	36470868	36471053	-70572665	+	L4_B_Mam	LINE	RTE-X	4071	4268	-673	1
chr14	36482791	36482792	chunk0059_320_1	37.14887	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	36482508	36482813	-70560905	-	LTR88b	LTR	Gypsy?	-383	454	134	1
chr14	36968059	36968060	chunk0059_338_1	67.59397	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	36968010	36968150	-70075568	-	L2b	LINE	L2	-253	3122	2981	1
chr14	37001727	37001728	chunk0059_341_1	8.24382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	37001632	37001772	-70041946	-	L2c	LINE	L2	0	3387	3243	1
chr14	37200562	37200563	chunk0059_350_1	14.86599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	37200342	37200671	-69843047	-	MER57E1	LTR	ERV1	0	372	5	1
chr14	37254471	37254472	chunk0059_355_1	7.87199	AR_DHT_Control	chr14	37254463	37254616	-69789102	-	L1MC1	LINE	L1	-5	6328	6173	1
chr14	37274719	37274720	chunk0059_357_1	4.73472	AR_DHT_Control	chr14	37274629	37274816	-69768902	+	MIR	SINE	MIR	12	261	-1	1
chr14	37363552	37363553	chunk0059_372_1	21.2741	AR_DHT_Control	chr14	37361875	37364273	-69679445	-	L1PA6	LINE	L1	-3758	2388	1	1
chr14	37427099	37427100	chunk0059_382_1	28.7935	AR_DHT_Control	chr14	37426943	37427589	-69616129	+	L1MB4	LINE	L1	5522	6172	-8	1
chr14	37459156	37459157	chunk0059_387_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	37458896	37459792	-69583926	+	L1PB4	LINE	L1	2865	3755	-2391	1
chr14	37517633	37517634	chunk0059_389_1	23.35234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	37517427	37518357	-69525361	+	L1MC5a	LINE	L1	269	1318	-1459	1
chr14	37527337	37527338	chunk0059_393_1	30.2284	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	37527330	37527355	-69516363	+	(TTA)n	Simple_repeat	Simple_repeat	1	25	0	1
chr14	37566953	37566954	chunk0059_397_1	101.7463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	37566905	37567195	-69476523	+	AmnSINE2	SINE	tRNA-Deu	52	349	-9	1
chr14	37645734	37645735	chunk0059_402_1	6.21736	AR_DHT_Control	chr14	37645348	37645799	-69397919	-	L2a	LINE	L2	0	3426	2915	1
chr14	37778235	37778236	chunk0059_407_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	37776906	37779358	-69264360	-	L1PA15	LINE	L1	-4326	2459	19	1
chr14	38293828	38293829	chunk0059_430_1	11.7718	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	38292815	38294522	-68749196	-	L1PB2	LINE	L1	-2	6149	4432	1
chr14	38329651	38329652	chunk0059_434_1	13.18101	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	38329521	38329681	-68714037	+	L1ME3	LINE	L1	5989	6155	-7	1
chr14	38452127	38452128	chunk0059_438_1	41.1054	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	38451193	38453495	-68590223	+	L1PA10	LINE	L1	2637	4918	-1413	1
chr14	38599166	38599167	chunk0059_439_1	17.6003	AR_DHT_Control	chr14	38597006	38602292	-68441426	-	L1PA7	LINE	L1	-1247	5214	3	1
chr14	38671746	38671747	chunk0059_440_1	13.2288	AR_DHT_Control	chr14	38671724	38675217	-68368501	+	L1PA6	LINE	L1	1002	4504	-1815	1
chr14	38839958	38839959	chunk0059_444_1	9.76623	AR_DHT_Control	chr14	38839838	38840581	-68203137	+	L1M6	LINE	L1	549	1413	-5083	1
chr14	39229450	39229451	chunk0060_8_1	5.6425	AR_DHT_Control	chr14	39229306	39229565	-67814153	-	LTR16A	LTR	ERVL	-21	401	130	1
chr14	39406485	39406486	chunk0060_13_1	39.6486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	39406351	39406784	-67636934	+	L1MEc	LINE	L1	20	491	-5909	1
chr14	39605966	39605967	chunk0060_19_1	3.99562	AR_DHT_Control	chr14	39605850	39606210	-67437508	-	MamGypsy2-I	LTR	Gypsy	-1737	2429	2042	1
chr14	39771387	39771388	chunk0060_23_1	43.8585	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	39770681	39771584	-67272134	-	Tigger3b	DNA	TcMar-Tigger	-197	1034	51	1
chr14	39781308	39781309	chunk0060_24_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	39779303	39781914	-67261804	-	L1PBa1	LINE	L1	-3911	3032	378	1
chr14	39853609	39853610	chunk0060_25_1	6.58746	AR_DHT_Control	chr14	39853140	39853658	-67190060	+	L1ME2z	LINE	L1	5428	5959	-485	1
chr14	40172393	40172394	chunk0060_27_1	113.14417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	40172228	40172430	-66871288	-	L1MD2	LINE	L1	-162	6197	5977	1
chr14	40393323	40393324	chunk0060_33_1	25.20282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	40393259	40393532	-66650186	+	ERVL-E-int	LTR	ERVL	2960	3247	-2420	1
chr14	40414532	40414533	chunk0060_36_1	18.53151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	40414424	40414590	-66629128	-	MER5B	DNA	hAT-Charlie	0	178	9	1
chr14	40698276	40698277	chunk0060_38_1	6.6468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	40698203	40698609	-66345109	-	MER57C2	LTR	ERV1	0	434	7	1
chr14	40955322	40955323	chunk0060_39_1	18.2232	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	40954934	40956059	-66087659	-	L1PA15	LINE	L1	-477	5688	4610	1
chr14	40983602	40983603	chunk0060_42_1	16.891	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	40983108	40985617	-66058101	-	L1MA2	LINE	L1	0	7723	5198	1
chr14	41167282	41167283	chunk0060_45_1	5.37222	AR_DHT_Control	chr14	41166856	41167455	-65876263	+	MER76	LTR	ERVL	1	660	-31	1
chr14	41253977	41253978	chunk0060_46_1	7.97539	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	41252704	41254211	-65789507	-	MER52A	LTR	ERV1	0	1755	1	1
chr14	41288776	41288777	chunk0060_47_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	41288192	41290209	-65753509	+	L1PA15	LINE	L1	497	2458	-4328	1
chr14	41349894	41349895	chunk0060_48_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	41349256	41350884	-65692834	+	MER52A	LTR	ERV1	1	1755	0	1
chr14	41522056	41522057	chunk0060_55_1	29.5308	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	41521881	41522205	-65521513	-	LTR47A2	LTR	ERVL	-94	338	1	1
chr14	41636955	41636956	chunk0060_60_1	25.01343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	41636664	41637206	-65406512	-	MER70A	LTR	ERVL	0	472	1	1
chr14	41652927	41652928	chunk0060_62_1	31.565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	41652703	41653418	-65390300	-	L1P3	LINE	L1	-555	5613	4897	1
chr14	41824838	41824839	chunk0060_63_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	41824805	41825408	-65218310	-	L1PB4	LINE	L1	-5628	1587	763	1
chr14	41833585	41833586	chunk0060_65_1	20.05031	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	41832152	41833621	-65210097	-	ERVL-E-int	LTR	ERVL	-480	5187	3625	1
chr14	41918118	41918119	chunk0060_68_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	41916331	41918201	-65125517	-	L1MB4	LINE	L1	-3958	2791	789	1
chr14	41925775	41925776	chunk0060_70_1	56.21193	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	41925626	41925776	-65117942	-	MamRep488	DNA	hAT-Tip100	-3	216	51	1
chr14	42023635	42023636	chunk0060_77_1	55.95	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	42023400	42023753	-65019965	-	Charlie1b	DNA	hAT-Charlie	-126	397	2	1
chr14	42120913	42120914	chunk0060_80_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	42118831	42121260	-64922458	+	L1PB1	LINE	L1	3138	5583	-568	1
chr14	42168726	42168727	chunk0060_82_1	24.3142	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	42166027	42170980	-64872738	-	L1PA7	LINE	L1	0	6469	1570	1
chr14	42193135	42193136	chunk0060_84_1	29.6351	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	42193074	42193173	-64850545	+	LTR16C	LTR	ERVL	385	485	-4	1
chr14	42544133	42544134	chunk0060_91_1	20.0054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	42542788	42544462	-64499256	-	L1MA9	LINE	L1	-11	6301	4567	1
chr14	42732991	42732992	chunk0060_95_1	12.0416	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	42732956	42733589	-64310129	+	L1ME3	LINE	L1	5297	6055	-107	1
chr14	43308492	43308493	chunk0060_99_1	10.1791	AR_DHT_Control	chr14	43307577	43308640	-63735078	+	Tigger17b	DNA	TcMar-Tigger	1	1072	-1	1
chr14	43378047	43378048	chunk0060_101_1	12.8008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	43377090	43378224	-63665494	-	Charlie1a	DNA	hAT-Charlie	-6	1449	335	1
chr14	43384870	43384871	chunk0060_103_1	7.58612	AR_DHT_Control	chr14	43384490	43384918	-63658800	+	L1MC1	LINE	L1	3927	4355	-1791	1
chr14	43449553	43449554	chunk0060_109_1	17.03007	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	43449465	43449566	-63594152	+	AluJb	SINE	Alu	198	299	-13	1
chr14	43460861	43460862	chunk0060_110_1	13.5125	AR_DHT_Control	chr14	43460821	43460923	-63582795	+	MamGypLTR3a	LTR	Gypsy	448	551	-430	1
chr14	43608669	43608670	chunk0060_113_1	5.6425	AR_DHT_Control	chr14	43608624	43609020	-63434698	-	MLT1B	LTR	ERVL-MaLR	0	390	4	1
chr14	43641202	43641203	chunk0060_114_1	8.02791	AR_DHT_Control	chr14	43638782	43644793	-63398925	+	L1PB2	LINE	L1	59	5236	-1679	1
chr14	43768884	43768885	chunk0060_116_1	6.48643	AR_DHT_Control	chr14	43768752	43769229	-63274489	+	MER51B	LTR	ERV1	1	632	-2	1
chr14	44052960	44052961	chunk0060_128_1	16.67158	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	44052920	44053094	-62990624	+	MamGypsy2-I	LTR	Gypsy	3831	4007	-159	1
chr14	44155091	44155092	chunk0060_129_1	24.1111	AR_DHT_Control	chr14	44154188	44156258	-62887460	+	L1M1	LINE	L1	463	3156	-4409	1
chr14	44513393	44513394	chunk0060_130_1	14.6406	AR_DHT_Control	chr14	44510599	44514006	-62529712	-	L1PA6	LINE	L1	0	6154	2323	1
chr14	44627106	44627107	chunk0060_131_1	8.26412	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	44626599	44627146	-62416572	+	LTR18B	LTR	ERVL	1	614	0	1
chr14	44701606	44701607	chunk0060_134_1	7.80475	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	44701473	44701966	-62341752	-	MLT1H	LTR	ERVL-MaLR	-21	603	3	1
chr14	44939102	44939103	chunk0060_137_1	5.81334	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	44938669	44939938	-62103780	-	MSTD-int	LTR	ERVL-MaLR	-350	1385	6	1
chr14	44997522	44997523	chunk0060_143_1	11.9613	AR_DHT_Control	chr14	44997432	44997562	-62046156	-	L2a	LINE	L2	-760	2659	2526	1
chr14	45006854	45006855	chunk0060_145_1	26.2123	AR_DHT_Control	chr14	45006763	45006861	-62036857	-	L1ME4a	LINE	L1	-480	5762	5661	1
chr14	45048504	45048505	chunk0060_146_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	45048488	45048694	-61995024	-	MLT1E2	LTR	ERVL-MaLR	0	654	399	1
chr14	45069786	45069787	chunk0060_148_1	72.15875	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	45069397	45069828	-61973890	+	L1MD	LINE	L1	5193	5608	-634	1
chr14	45097705	45097706	chunk0060_152_1	19.25208	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	45097437	45097777	-61945941	-	L1ME3G	LINE	L1	-404	5720	5311	1
chr14	45251302	45251303	chunk0060_159_1	15.71154	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	45251082	45251402	-61792316	+	Tigger3a	DNA	TcMar-Tigger	1	343	-5	1
chr14	45332839	45332840	chunk0060_163_1	19.85549	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	45332663	45332892	-61710826	+	LTR50	LTR	ERVL	1	274	-521	1
chr14	45412068	45412069	chunk0060_165_1	22.2257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	45411408	45416903	-61626815	+	L1PA6	LINE	L1	2	5491	-663	1
chr14	45447370	45447371	chunk0060_168_1	44.581	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	45446448	45448053	-61595665	-	L1MA4A	LINE	L1	-196	7526	5980	1
chr14	45492227	45492228	chunk0060_171_1	6.43609	AR_DHT_Control	chr14	45491428	45493613	-61550105	-	L1M1	LINE	L1	-5321	2244	15	1
chr14	46074340	46074341	chunk0060_173_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	46074197	46074360	-60969358	+	MIR	SINE	MIR	6	188	-74	1
chr14	46145005	46145006	chunk0060_176_1	24.09	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	46144845	46145019	-60898699	+	MER45A	DNA	hAT-Tip100	1	178	0	1
chr14	46401257	46401258	chunk0060_178_1	17.40498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	46401244	46401283	-60642435	+	(TG)n	Simple_repeat	Simple_repeat	1	39	0	1
chr14	46595487	46595488	chunk0060_180_1	18.0716	AR_DHT_Control	chr14	46595066	46596158	-60447560	-	L1MA7	LINE	L1	-2	6289	5185	1
chr14	46608713	46608714	chunk0060_181_1	27.1812	AR_DHT_Control	chr14	46608628	46609018	-60434700	-	L1PA15	LINE	L1	-1	6164	5745	1
chr14	46631113	46631114	chunk0060_182_1	43.4285	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	46630907	46631161	-60412557	+	L2a	LINE	L2	2711	2962	-457	1
chr14	46900746	46900747	chunk0060_184_1	103.977	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	46900046	46901022	-60142696	+	L1MD2	LINE	L1	5318	6358	-1	1
chr14	47012640	47012641	chunk0060_189_1	6.54035	AR_DHT_Control	chr14	47012543	47012661	-60031057	+	MIRb	SINE	MIR	153	268	0	1
chr14	47562264	47562265	chunk0060_190_1	10.7862	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	47560370	47563578	-59480140	-	L1PA15	LINE	L1	-678	6107	2925	1
chr14	47566176	47566177	chunk0060_191_1	7.62275	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	47564656	47566904	-59476814	-	L1PA15	LINE	L1	-4554	2231	14	1
chr14	47776492	47776493	chunk0060_193_1	7.58612	AR_DHT_Control	chr14	47776455	47776552	-59267166	+	MER34A	LTR	ERV1	7	104	-467	1
chr14	47851109	47851110	chunk0060_194_1	8.79742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	47848104	47852137	-59191581	+	L1PA10	LINE	L1	2477	6482	-1	1
chr14	48105429	48105430	chunk0060_200_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	48104433	48105445	-58938273	-	L1MEc	LINE	L1	-4788	1612	598	1
chr14	48335244	48335245	chunk0060_202_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	48334937	48335661	-58708057	+	MER50	LTR	ERV1	2	722	-12	1
chr14	48814692	48814693	chunk0060_208_1	70.7671	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	48814088	48815010	-58228708	+	L1M3f	LINE	L1	1	926	-4402	1
chr14	48842917	48842918	chunk0060_211_1	60.66556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	48842711	48843324	-58200394	+	L2a	LINE	L2	2752	3426	0	1
chr14	48905370	48905371	chunk0060_218_1	24.98266	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	48905284	48905474	-58138244	-	L2a	LINE	L2	0	3426	3220	1
chr14	49240995	49240996	chunk0060_221_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	49239112	49241938	-57801780	-	L1PA16	LINE	L1	-4016	2837	26	1
chr14	49429675	49429676	chunk0060_224_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	49428823	49431440	-57612278	+	L1PA15	LINE	L1	4	2707	-3982	1
chr14	49479547	49479548	chunk0060_228_1	52.70064	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	49479279	49479598	-57564120	+	L2c	LINE	L2	3022	3373	-14	1
chr14	49645149	49645150	chunk0060_236_1	58.8795	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	49645082	49645296	-57398422	-	L1ME4b	LINE	L1	-488	436	221	1
chr14	49658647	49658648	chunk0060_238_1	5.40567	AR_DHT_Control	chr14	49658585	49659133	-57384585	+	Tigger3b	DNA	TcMar-Tigger	3	597	-634	1
chr14	49660265	49660266	chunk0060_239_1	22.04242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	49659886	49660365	-57383353	+	Tigger3b	DNA	TcMar-Tigger	738	1231	0	1
chr14	50025823	50025824	chunk0060_253_1	7.91804	AR_DHT_Control	chr14	50025640	50026157	-57017561	+	MLT1F2	LTR	ERVL-MaLR	12	535	-25	1
chr14	50146813	50146814	chunk0060_257_1	31.0065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	50146669	50146912	-56896806	+	L1ME3Cz	LINE	L1	417	693	-304	1
chr14	50165377	50165378	chunk0060_260_1	76.98112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	50165097	50165382	-56878336	-	L1MC4	LINE	L1	-177	7865	7572	1
chr14	50313120	50313121	chunk0060_264_1	6.58498	AR_DHT_Control	chr14	50313051	50313135	-56730583	+	MIR3	SINE	MIR	91	185	-23	1
chr14	50442091	50442092	chunk0060_280_1	25.15808	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	50441988	50442107	-56601611	-	MIRb	SINE	MIR	-119	149	18	1
chr14	50452455	50452456	chunk0060_283_1	11.7378	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	50452237	50453273	-56590445	+	MER110-int	LTR	ERV1	2336	3385	-1262	1
chr14	50545049	50545050	chunk0060_288_1	57.9037	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	50544971	50545369	-56498349	+	LTR57	LTR	ERVL	1	411	0	1
chr14	50554575	50554576	chunk0060_289_1	16.6648	AR_DHT_Control	chr14	50554498	50554903	-56488815	+	LTR57	LTR	ERVL	1	411	0	1
chr14	50838593	50838594	chunk0060_301_1	5.00158	AR_DHT_Control	chr14	50838328	50838804	-56204914	+	LTR33	LTR	ERVL	3	513	-2	1
chr14	50995257	50995258	chunk0060_311_1	13.8492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	50995251	50995444	-56048274	+	L2a	LINE	L2	3202	3408	-18	1
chr14	51116905	51116906	chunk0060_312_1	28.19716	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	51116874	51117043	-55926675	+	MER117	DNA	hAT-Charlie	1	172	-25	1
chr14	51267795	51267796	chunk0060_316_1	16.13149	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	51267741	51268003	-55775715	-	MER103C	DNA	hAT-Charlie	0	297	6	1
chr14	51366222	51366223	chunk0060_321_1	5.58563	AR_DHT_Control	chr14	51365720	51366445	-55677273	-	L2a	LINE	L2	-2624	795	1	1
chr14	52111926	52111927	chunk0060_349_1	15.0481	AR_DHT_Control	chr14	52111736	52112867	-54930851	+	Tigger3b	DNA	TcMar-Tigger	82	1231	0	1
chr14	52158601	52158602	chunk0060_350_1	63.85827	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	52157773	52163865	-54879853	+	L1PA6	LINE	L1	4	6154	0	1
chr14	52291359	52291360	chunk0060_354_1	21.68864	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	52291232	52291502	-54752216	-	L1ME3B	LINE	L1	-24	6218	5925	1
chr14	52363513	52363514	chunk0060_365_1	11.946	AR_DHT_Control	chr14	52363494	52363629	-54680089	-	MIR	SINE	MIR	0	262	152	1
chr14	52413877	52413878	chunk0060_366_1	125.1674	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	52413664	52413922	-54629796	-	L1MA8	LINE	L1	-404	5887	5633	1
chr14	52423624	52423625	chunk0060_368_1	16.99049	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	52423600	52425023	-54618695	-	L1MEg	LINE	L1	-3305	3636	2034	1
chr14	52445600	52445601	chunk0060_370_1	10.4518	AR_DHT_Control	chr14	52445597	52445923	-54597795	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	1
chr14	52480284	52480285	chunk0060_371_1	12.1714	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	52474840	52480961	-54562757	+	L1PB1	LINE	L1	292	6509	-358	1
chr14	52515923	52515924	chunk0060_372_1	15.58775	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	52515710	52515956	-54527762	-	L1MEh	LINE	L1	-188	2319	2063	1
chr14	52577567	52577568	chunk0060_377_1	5.6425	AR_DHT_Control	chr14	52577541	52577684	-54466034	+	L1P4	LINE	L1	3183	3297	-2849	1
chr14	52609694	52609695	chunk0060_378_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	52607893	52609775	-54433943	-	L1MA4	LINE	L1	-3782	3777	1776	1
chr14	52610697	52610698	chunk0060_380_1	32.85684	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	52610682	52610720	-54432998	+	L2a	LINE	L2	3390	3426	0	1
chr14	52664154	52664155	chunk0060_381_1	6.18774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	52664134	52664174	-54379544	+	(TA)n	Simple_repeat	Simple_repeat	1	41	0	1
chr14	52934918	52934919	chunk0060_394_1	7.36432	AR_DHT_Control	chr14	52934183	52935127	-54108591	-	Tigger6a	DNA	TcMar-Tigger	-61	1022	60	1
chr14	53010370	53010371	chunk0060_401_1	137.20206	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	53010105	53010504	-54033214	+	L1ME4b	LINE	L1	277	752	-140	1
chr14	53091122	53091123	chunk0060_408_1	39.21148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr14	53090885	53091157	-53952561	+	L4_B_Mam	LINE	RTE-X	4443	4741	-200	1
chr14	53148894	53148895	chunk0060_412_1	18.87253	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	53148849	53148944	-53894774	-	MIR	SINE	MIR	-7	255	155	1
chr14	53305245	53305246	chunk0060_416_1	64.94975	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	53305064	53305270	-53738448	-	LTR88c	LTR	Gypsy?	-606	256	15	1
chr14	53327704	53327705	chunk0060_418_1	7.58612	AR_DHT_Control	chr14	53327504	53327725	-53715993	-	HAL1	LINE	L1	-2271	236	1	1
chr14	53706016	53706017	chunk0060_420_1	63.9655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	53705881	53706035	-53337683	+	L1PA11	LINE	L1	6017	6170	-4	1
chr14	53810509	53810510	chunk0060_424_1	36.8448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	53810349	53810590	-53233128	-	L2c	LINE	L2	-126	3261	2979	1
chr14	54285178	54285179	chunk0060_429_1	5.20246	AR_DHT_Control	chr14	54284995	54285182	-52758536	-	MIR	SINE	MIR	-5	257	63	1
chr14	54831346	54831347	chunk0060_449_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	54830511	54831472	-52212246	-	L1PA16	LINE	L1	0	6166	5183	1
chr14	55064429	55064430	chunk0060_455_1	16.30297	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	55064360	55064534	-51979184	-	L4_A_Mam	LINE	RTE-X	-1034	3956	3793	1
chr14	55241848	55241849	chunk0060_461_1	161.698	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	55241667	55241997	-51801721	-	L1MC4	LINE	L1	-945	7097	6729	1
chr14	55344920	55344921	chunk0061_1_1	57.1082	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	55344846	55344966	-51698752	+	L2c	LINE	L2	3184	3333	-54	1
chr14	55363682	55363683	chunk0061_2_1	6.48643	AR_DHT_Control	chr14	55363645	55363857	-51679861	+	MER30	DNA	hAT-Charlie	1	230	0	1
chr14	55523477	55523478	chunk0061_5_1	37.0094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	55523273	55523583	-51520135	+	L1MA3	LINE	L1	7185	7465	-259	1
chr14	55588627	55588628	chunk0061_9_1	45.31174	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	55588005	55589035	-51454683	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	5	1
chr14	55626378	55626379	chunk0061_13_1	7.36432	AR_DHT_Control	chr14	55625974	55626443	-51417275	-	L1M7	LINE	L1	-4843	1375	877	1
chr14	55789675	55789676	chunk0061_22_1	18.67217	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	55789600	55789813	-51253905	+	Charlie7	DNA	hAT-Charlie	496	720	-1892	1
chr14	55795952	55795953	chunk0061_25_1	5.66854	AR_DHT_Control	chr14	55795829	55796017	-51247701	+	L2a	LINE	L2	3186	3359	-67	1
chr14	55832436	55832437	chunk0061_29_1	97.3439	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	55832391	55832758	-51210960	+	L2a	LINE	L2	3051	3425	-1	1
chr14	56028735	56028736	chunk0061_38_1	18.40984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	56028589	56028743	-51014975	-	MLT1J	LTR	ERVL-MaLR	-351	161	6	1
chr14	56148503	56148504	chunk0061_41_1	8.24351	AR_DHT_Control	chr14	56148426	56148869	-50894849	+	L2c	LINE	L2	2938	3370	-5	1
chr14	56168375	56168376	chunk0061_43_1	7.70585	AR_DHT_Control	chr14	56167088	56169784	-50873934	-	L1MA1	LINE	L1	-4836	2729	11	1
chr14	56399538	56399539	chunk0061_54_1	8.64577	AR_DHT_Control	chr14	56399538	56399622	-50644096	+	MIR	SINE	MIR	176	260	-2	1
chr14	56522634	56522635	chunk0061_58_1	19.34845	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	56522342	56522817	-50520901	-	L1PB3	LINE	L1	-838	5305	4846	1
chr14	56606941	56606942	chunk0061_67_1	5.80784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	56606918	56607354	-50436364	-	L4_C_Mam	LINE	RTE-X	-281	4857	4342	1
chr14	56702152	56702153	chunk0061_79_1	27.2976	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	56701261	56702483	-50341235	+	L1MD1	LINE	L1	4808	6044	-198	1
chr14	56972077	56972078	chunk0061_85_1	19.30994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	56971810	56972243	-50071475	-	L1M5	LINE	L1	-1725	4421	3983	1
chr14	56984516	56984517	chunk0061_86_1	12.73	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	56984245	56984539	-50059179	+	AluJr4	SINE	Alu	12	306	-6	1
chr14	57004537	57004538	chunk0061_87_1	6.38514	AR_DHT_Control	chr14	57004515	57004664	-50039054	+	MIR3	SINE	MIR	40	202	-6	1
chr14	57402397	57402398	chunk0061_91_1	12.1004	AR_DHT_Control	chr14	57402164	57402431	-49641287	+	L2a	LINE	L2	3083	3420	-6	1
chr14	57611859	57611860	chunk0061_102_1	16.94611	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	57611811	57612104	-49431614	+	L1MEc	LINE	L1	13	311	-6089	1
chr14	57718135	57718136	chunk0061_104_1	27.2551	AR_DHT_Control	chr14	57717714	57720596	-49323122	-	L1MA2	LINE	L1	0	7723	4803	1
chr14	57757384	57757385	chunk0061_105_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	57756961	57758001	-49285717	-	L1MEc	LINE	L1	-3568	2751	1653	1
chr14	57782535	57782536	chunk0061_106_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	57782239	57784401	-49259317	+	Tigger2	DNA	TcMar-Tigger	1	2230	-488	1
chr14	57818745	57818746	chunk0061_107_1	114.1344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	57818202	57818866	-49224852	+	ERV3-16A3_I-int	LTR	ERVL	4475	5140	-86	1
chr14	58367554	58367555	chunk0061_116_1	50.09273	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	58367454	58367676	-48676042	-	L2c	LINE	L2	-10	3416	3156	1
chr14	58463368	58463369	chunk0061_117_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	58463059	58463426	-48580292	+	L2a	LINE	L2	3028	3421	-5	1
chr14	59039149	59039150	chunk0061_128_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	59039100	59039154	-48004564	+	(TAC)n	Simple_repeat	Simple_repeat	1	54	0	1
chr14	59122315	59122316	chunk0061_132_1	243.952	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	59121946	59122375	-47921343	-	LTR40b	LTR	ERVL	0	462	3	1
chr14	59244719	59244720	chunk0061_136_1	8.79298	AR_DHT_Control	chr14	59244705	59244737	-47798981	+	(TG)n	Simple_repeat	Simple_repeat	1	33	0	1
chr14	59263133	59263134	chunk0061_138_1	160.8369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	59262801	59263212	-47780506	-	L2b	LINE	L2	0	3375	2943	1
chr14	59290474	59290475	chunk0061_140_1	4.33434	AR_DHT_Control	chr14	59290323	59290554	-47753164	+	MIR	SINE	MIR	16	262	0	1
chr14	59375809	59375810	chunk0061_142_1	6.21736	AR_DHT_Control	chr14	59375037	59376997	-47666721	+	L1MC1	LINE	L1	4289	6333	0	1
chr14	59448969	59448970	chunk0061_143_1	13.0568	AR_DHT_Control	chr14	59448784	59449001	-47594717	+	HERVH-int	LTR	ERV1	5600	5819	-1894	1
chr14	59452691	59452692	chunk0061_144_1	19.45078	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	59452274	59453417	-47590301	+	L1MC1	LINE	L1	5179	6333	0	1
chr14	59634153	59634154	chunk0061_151_1	7.94482	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	59633931	59634234	-47409484	-	L2a	LINE	L2	0	3426	3065	1
chr14	59664699	59664700	chunk0061_153_1	14.41592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	59664668	59665140	-47378578	-	L1MD2	LINE	L1	-519	5840	5332	1
chr14	59691315	59691316	chunk0061_154_1	8.30836	AR_DHT_Control	chr14	59690117	59692912	-47350806	+	L1PA15-16	LINE	L1	2859	5654	-1195	1
chr14	59695461	59695462	chunk0061_156_1	140.4134	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	59695340	59695546	-47348172	+	MLT1I	LTR	ERVL-MaLR	91	290	-121	1
chr14	59788465	59788466	chunk0061_161_1	15.56783	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	59787992	59788559	-47255159	-	L1ME4b	LINE	L1	-256	636	60	1
chr14	59822498	59822499	chunk0061_166_1	36.0684	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	59820783	59823416	-47220302	-	L1PA14	LINE	L1	-715	5394	2774	1
chr14	59854923	59854924	chunk0061_168_1	140.4228	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	59854706	59854931	-47188787	+	MIR	SINE	MIR	13	256	-6	1
chr14	59931256	59931257	chunk0061_172_1	15.51081	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	59931192	59931351	-47112367	-	MIRc	SINE	MIR	-14	254	88	1
chr14	60017305	60017306	chunk0061_182_1	17.8382	AR_DHT_Control	chr14	60017214	60017677	-47026041	+	L2b	LINE	L2	2921	3387	0	1
chr14	60156527	60156528	chunk0061_186_1	14.41538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	60156526	60156619	-46887099	+	MIR3	SINE	MIR	110	202	-6	1
chr14	60157692	60157693	chunk0061_187_1	15.7246	AR_DHT_Control	chr14	60157641	60157761	-46885957	+	L2b	LINE	L2	3249	3370	-5	1
chr14	60233906	60233907	chunk0061_194_1	9.70003	AR_DHT_Control	chr14	60233572	60234654	-46809064	-	L1M4	LINE	L1	-6426	1091	10	1
chr14	60240454	60240455	chunk0061_195_1	52.77574	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	60240438	60240508	-46803210	+	L1P3	LINE	L1	5262	5341	-805	1
chr14	60273187	60273188	chunk0061_199_1	99.09816	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	60273172	60273228	-46770490	-	L2c	LINE	L2	-5	3370	3312	1
chr14	60279022	60279023	chunk0061_200_1	133.9252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	60278984	60279113	-46764605	-	MER112	DNA	hAT-Charlie	-7	254	114	1
chr14	60363474	60363475	chunk0061_209_1	12.19678	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	60363326	60363602	-46680116	+	MLT1H1	LTR	ERVL-MaLR	10	329	-266	1
chr14	60382410	60382411	chunk0061_211_1	11.643	AR_DHT_Control	chr14	60381629	60387770	-46655948	+	L1PA6	LINE	L1	3	6138	-16	1
chr14	60443805	60443806	chunk0061_212_1	22.25384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	60443052	60449196	-46594522	+	L1PA6	LINE	L1	5	6153	-1	1
chr14	60551803	60551804	chunk0061_216_1	44.72451	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	60549712	60551820	-46491898	-	L1MA5A	LINE	L1	-4705	2084	19	1
chr14	60795032	60795033	chunk0061_241_1	8.73763	AR_DHT_Control	chr14	60794938	60795051	-46248667	-	L2a	LINE	L2	-55	3371	3244	1
chr14	61042449	61042450	chunk0061_246_1	18.96097	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	61042357	61042456	-46001262	-	MER131	DNA?	DNA?	-88	127	26	1
chr14	61285591	61285592	chunk0061_252_1	94.98446	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	61285561	61285822	-45757896	-	MIRb	SINE	MIR	0	268	9	1
chr14	61430428	61430429	chunk0061_265_1	138.18302	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	61430097	61430480	-45613238	+	L1P3	LINE	L1	5278	5673	-771	1
chr14	61567411	61567412	chunk0061_286_1	37.78074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	61567157	61567638	-45476080	-	L1MA5A	LINE	L1	-4	6293	5781	1
chr14	61639272	61639273	chunk0061_292_1	93.8442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	61638832	61639491	-45404227	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	688	-380	1
chr14	61647974	61647975	chunk0061_295_1	30.081	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	61647913	61649146	-45394572	+	L1MC3	LINE	L1	5596	6857	-928	1
chr14	61653059	61653060	chunk0061_296_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	61652062	61653405	-45390313	+	L2a	LINE	L2	1812	3345	-81	1
chr14	61712216	61712217	chunk0061_297_1	8.27376	AR_DHT_Control	chr14	61711915	61712547	-45331171	-	L2a	LINE	L2	0	3426	2740	1
chr14	61735499	61735500	chunk0061_298_1	9.21264	AR_DHT_Control	chr14	61735407	61735668	-45308050	+	L2c	LINE	L2	3055	3385	-2	1
chr14	61766326	61766327	chunk0061_299_1	34.2305	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	61765997	61766536	-45277182	+	LTR10C	LTR	ERV1	2	604	-29	1
chr14	61777417	61777418	chunk0061_302_1	16.49806	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	61777393	61777586	-45266132	-	AluJr	SINE	Alu	-31	281	93	1
chr14	61863411	61863412	chunk0061_306_1	21.7097	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	61862455	61864081	-45179637	-	L1MC1	LINE	L1	-1	6332	4670	1
chr14	62207166	62207167	chunk0061_311_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	62206493	62208171	-44835547	-	MSTD-int	LTR	ERVL-MaLR	-2	1733	2	1
chr14	62689927	62689928	chunk0061_317_1	12.19153	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	62689892	62690025	-44353693	-	L2b	LINE	L2	-3	3372	3244	1
chr14	62972423	62972424	chunk0061_322_1	11.61384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	62970071	62973200	-44070518	+	L1MC1	LINE	L1	3225	6333	0	1
chr14	63093702	63093703	chunk0061_326_1	5.0408	AR_DHT_Control	chr14	63092861	63093706	-43950012	+	MER21B	LTR	ERVL	1	866	-2	1
chr14	63179707	63179708	chunk0061_328_1	38.12554	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63179687	63179736	-43863982	-	MER91A	DNA	hAT-Tip100	-151	45	1	1
chr14	63286259	63286260	chunk0061_331_1	76.19604	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	63286241	63286498	-43757220	-	L2c	LINE	L2	-97	3290	3038	1
chr14	63335513	63335514	chunk0061_334_1	24.7601	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63334832	63338576	-43705142	+	L1PB1	LINE	L1	3134	6866	-1	1
chr14	63370943	63370944	chunk0061_335_1	7.36432	AR_DHT_Control	chr14	63370707	63371197	-43672521	+	MLT1G1	LTR	ERVL-MaLR	3	579	0	1
chr14	63467998	63467999	chunk0061_341_1	7.36432	AR_DHT_Control	chr14	63467844	63468083	-43575635	+	MIR	SINE	MIR	2	248	-14	1
chr14	63477385	63477386	chunk0061_342_1	27.5675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63477360	63477495	-43566223	-	MIR	SINE	MIR	-6	256	84	1
chr14	63490544	63490545	chunk0061_343_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63490189	63491387	-43552331	+	L1PA17	LINE	L1	4899	6163	-3	1
chr14	63624767	63624768	chunk0061_344_1	17.97483	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	63624502	63625429	-43418289	+	L1ME1	LINE	L1	6046	6982	-57	1
chr14	63662981	63662982	chunk0061_347_1	11.0699	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	63662774	63664173	-43379545	-	MER52A	LTR	ERV1	0	1755	3	1
chr14	63678104	63678105	chunk0061_352_1	63.014	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63677941	63678159	-43365559	-	LTR47A2	LTR	ERVL	-197	235	1	1
chr14	63683355	63683356	chunk0061_354_1	46.6674	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	63683321	63683356	-43360362	-	Alu	SINE	Alu	-98	35	1	1
chr14	63888168	63888169	chunk0061_360_1	7.97574	AR_DHT_Control	chr14	63888092	63888230	-43155488	-	MIR3	SINE	MIR	-25	183	30	1
chr14	63896475	63896476	chunk0061_362_1	35.3361	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	63895912	63896567	-43147151	-	L4_A_Mam	LINE	RTE-X	0	4990	4273	1
chr14	63920208	63920209	chunk0061_364_1	8.9624	AR_DHT_Control	chr14	63920078	63920499	-43123219	-	L2c	LINE	L2	0	3387	2942	1
chr14	63960333	63960334	chunk0061_366_1	40.25964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	63960305	63960434	-43083284	+	L2b	LINE	L2	3170	3319	-68	1
chr14	64144623	64144624	chunk0061_379_1	27.2231	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	64144433	64144923	-42898795	+	L1ME4c	LINE	L1	11	556	-274	1
chr14	64337246	64337247	chunk0061_384_1	5.77445	AR_DHT_Control	chr14	64337183	64337309	-42706409	+	MIRc	SINE	MIR	11	149	-119	1
chr14	64432520	64432521	chunk0061_385_1	67.249	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	64432344	64432731	-42610987	+	L1ME1	LINE	L1	5600	6021	-158	1
chr14	64594551	64594552	chunk0061_393_1	8.62865	AR_DHT_Control	chr14	64594400	64594580	-42449138	+	L1MC3	LINE	L1	7621	7785	0	1
chr14	64632793	64632794	chunk0061_399_1	10.3253	AR_DHT_Control	chr14	64632665	64632896	-42410822	-	MLT1B	LTR	ERVL-MaLR	-8	382	177	1
chr14	65169065	65169066	chunk0061_422_1	6.6833	AR_DHT_Control	chr14	65168814	65169087	-41874631	+	MLT1J	LTR	ERVL-MaLR	8	280	-232	1
chr14	65184342	65184343	chunk0061_423_1	5.82105	AR_DHT_Control	chr14	65184314	65184403	-41859315	-	UCON77	Unknown	Unknown	0	117	27	1
chr14	65231729	65231730	chunk0061_425_1	87.38821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	65231718	65232035	-41811683	+	L1MEc	LINE	L1	779	1134	-5953	1
chr14	65243829	65243830	chunk0061_427_1	29.20947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	65242817	65243843	-41799875	-	L2c	LINE	L2	0	3387	2291	1
chr14	65250307	65250308	chunk0061_429_1	33.98911	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	65249282	65250562	-41793156	-	ERVL-B4-int	LTR	ERVL	-376	5338	4024	1
chr14	65424095	65424096	chunk0061_432_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	65423567	65424528	-41619190	-	Tigger2	DNA	TcMar-Tigger	-1573	1145	147	1
chr14	65468124	65468125	chunk0061_433_1	13.6455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	65468114	65468173	-41575545	+	OldhAT1	DNA	hAT-Ac	960	1018	-1830	1
chr14	65594571	65594572	chunk0061_436_1	14.29046	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	65594100	65595106	-41448612	-	LTR28B	LTR	ERV1	0	974	1	1
chr14	65632611	65632612	chunk0061_437_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	65632100	65632981	-41410737	-	L1PB1	LINE	L1	-368	5783	4902	1
chr14	65818255	65818256	chunk0061_447_1	5.37069	AR_DHT_Control	chr14	65817470	65819131	-41224587	+	(ACACC)n	Simple_repeat	Simple_repeat	1	1763	0	1
chr14	65943327	65943328	chunk0061_452_1	9.56062	AR_DHT_Control	chr14	65943136	65943353	-41100365	+	MIRb	SINE	MIR	42	260	-8	1
chr14	66246788	66246789	chunk0062_11_1	13.8656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	66246776	66246803	-40796915	+	(AC)n	Simple_repeat	Simple_repeat	1	28	0	1
chr14	66321226	66321227	chunk0062_15_1	55.1151	AR_DHT_Control	chr14	66320283	66321820	-40721898	+	L1MA5	LINE	L1	6110	7717	-2	1
chr14	66424299	66424300	chunk0062_17_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	66424205	66424311	-40619407	-	L2a	LINE	L2	-5	3421	3319	1
chr14	66424299	66424300	chunk0062_17_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	66424295	66424492	-40619226	+	MIRc	SINE	MIR	60	265	-3	1
chr14	66536775	66536776	chunk0062_20_1	6.88185	AR_DHT_Control	chr14	66536706	66537841	-40505877	-	L1ME3	LINE	L1	-3440	4014	2816	1
chr14	66540251	66540252	chunk0062_22_1	20.87527	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	66540043	66540357	-40503361	-	MLT1I	LTR	ERVL-MaLR	-17	394	71	1
chr14	66926315	66926316	chunk0062_25_1	7.3092	AR_DHT_Control	chr14	66925133	66927071	-40116647	-	L1MA3	LINE	L1	-1	7723	5750	1
chr14	67004000	67004001	chunk0062_31_1	7.97539	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67003871	67004012	-40039706	+	MIR3	SINE	MIR	4	142	-66	1
chr14	67032363	67032364	chunk0062_32_1	4.83532	AR_DHT_Control	chr14	67031937	67032501	-40011217	+	L1MB2	LINE	L1	699	1191	-5374	1
chr14	67057605	67057606	chunk0062_34_1	18.5851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67057232	67057612	-39986106	+	L1PA10	LINE	L1	6103	6482	-1	1
chr14	67151349	67151350	chunk0062_35_1	26.8288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	67150874	67151634	-39892084	-	LTR37-int	LTR	ERV1	-4371	847	100	1
chr14	67175750	67175751	chunk0062_37_1	13.0599	AR_DHT_Control	chr14	67174078	67178599	-39865119	-	L1PA6	LINE	L1	-6	6148	1628	1
chr14	67187841	67187842	chunk0062_38_1	9.99437	AR_DHT_Control	chr14	67187293	67188025	-39855693	+	L2c	LINE	L2	2470	3368	-19	1
chr14	67276349	67276350	chunk0062_45_1	23.8874	AR_DHT_Control	chr14	67276119	67276434	-39767284	+	L2c	LINE	L2	2794	3130	-257	1
chr14	67371633	67371634	chunk0062_51_1	44.6195	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	67371463	67371773	-39671945	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	1
chr14	67393832	67393833	chunk0062_53_1	40.71085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	67393753	67394092	-39649626	+	LTR47A2	LTR	ERVL	70	432	0	1
chr14	67442694	67442695	chunk0062_57_1	12.6114	AR_DHT_Control	chr14	67442627	67442739	-39600979	-	L2c	LINE	L2	-14	3373	3266	1
chr14	67492825	67492826	chunk0062_60_1	10.4198	AR_DHT_Control	chr14	67492791	67493170	-39550548	-	L2a	LINE	L2	-7	3419	2980	1
chr14	67506348	67506349	chunk0062_61_1	9.56998	AR_DHT_Control	chr14	67506232	67506435	-39537283	+	LTR78	LTR	ERV1	1079	1290	-14	1
chr14	67551289	67551290	chunk0062_66_1	178.821	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67551193	67551307	-39492411	-	MER94	DNA	hAT-Blackjack	-6	128	18	1
chr14	67697095	67697096	chunk0062_72_1	17.0918	AR_DHT_Control	chr14	67697069	67697443	-39346275	-	L2b	LINE	L2	0	3375	2995	1
chr14	67698837	67698838	chunk0062_73_1	40.3765	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67698680	67698924	-39344794	-	MER58A	DNA	hAT-Charlie	-1	223	5	1
chr14	67700195	67700196	chunk0062_75_1	12.5625	AR_DHT_Control	chr14	67700139	67700433	-39343285	-	MER101-int	LTR	ERV1	-3511	3128	2844	1
chr14	67702424	67702425	chunk0062_76_1	15.1752	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67702279	67702809	-39340909	-	LTR57-int	LTR	ERVL	-3944	1399	873	1
chr14	67787901	67787902	chunk0062_78_1	27.01282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	67787831	67788108	-39255610	+	MER68	LTR	ERVL	1	265	-298	1
chr14	67834599	67834600	chunk0062_80_1	7.53305	AR_DHT_Control	chr14	67834424	67834960	-39208758	+	L2c	LINE	L2	2818	3387	0	1
chr14	67846251	67846252	chunk0062_81_1	8.79298	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	67845959	67847263	-39196455	-	L1PA16	LINE	L1	-5343	1442	10	1
chr14	67898549	67898550	chunk0062_84_1	31.1043	AR_DHT_Control	chr14	67897951	67898717	-39145001	+	L1MA10	LINE	L1	5536	6305	-29	1
chr14	68108595	68108596	chunk0062_91_1	68.92974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	68107250	68108794	-38934924	+	L1MB7	LINE	L1	4394	6175	-9	1
chr14	68192659	68192660	chunk0062_103_1	5.03783	AR_DHT_Control	chr14	68192601	68192703	-38851015	-	MamRTE1	LINE	RTE-BovB	-1323	2489	2390	1
chr14	68274333	68274334	chunk0062_108_1	6.75575	AR_DHT_Control	chr14	68273925	68274335	-38769383	-	HAL1	LINE	L1	0	2507	2074	1
chr14	68415476	68415477	chunk0062_115_1	8.75677	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	68415390	68415672	-38628046	-	L2c	LINE	L2	0	3387	3087	1
chr14	68550581	68550582	chunk0062_129_1	146.5427	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	68550444	68550686	-38493032	-	MamRep434	DNA	TcMar-Tigger	-83	343	90	1
chr14	68778943	68778944	chunk0062_135_1	40.4013	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	68778910	68779041	-38264677	-	MIR3	SINE	MIR	-8	200	70	1
chr14	68870271	68870272	chunk0062_138_1	62.6075	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	68870266	68870477	-38173241	-	Kanga1a	DNA	TcMar-Tc2	-36	718	459	1
chr14	69102875	69102876	chunk0062_146_1	11.1388	AR_DHT_Control	chr14	69102620	69103109	-37940609	-	Tigger3b	DNA	TcMar-Tigger	-708	523	12	1
chr14	69125624	69125625	chunk0062_147_1	10.16726	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	69125559	69125909	-37917809	+	L1ME3Cz	LINE	L1	388	734	-263	1
chr14	69199905	69199906	chunk0062_154_1	15.50172	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	69199256	69200174	-37843544	-	Tigger3b	DNA	TcMar-Tigger	-290	941	2	1
chr14	69231625	69231626	chunk0062_156_1	13.11651	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	69231231	69231912	-37811806	-	HAL1	LINE	L1	-77	2430	1664	1
chr14	69310426	69310427	chunk0062_158_1	8.15319	AR_DHT_Control	chr14	69310370	69310483	-37733235	-	L1M5	LINE	L1	-1544	4602	4482	1
chr14	69343021	69343022	chunk0062_161_1	49.3675	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	69342784	69343098	-37700620	+	L2a	LINE	L2	3080	3421	-5	1
chr14	69357081	69357082	chunk0062_162_1	19.2345	AR_DHT_Control	chr14	69357005	69357259	-37686459	-	L2c	LINE	L2	-10	3377	3125	1
chr14	69433149	69433150	chunk0062_168_1	30.2818	AR_DHT_Control	chr14	69433140	69433700	-37610018	-	L1MC	LINE	L1	-2155	3991	3388	1
chr14	69580089	69580090	chunk0062_173_1	24.75875	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	69579955	69580175	-37463543	+	MER58A	DNA	hAT-Charlie	1	224	0	1
chr14	69786400	69786401	chunk0062_191_1	6.8205	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	69786362	69786586	-37257132	-	MIRb	SINE	MIR	-16	252	26	1
chr14	70048083	70048084	chunk0062_203_1	61.3445	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	70047904	70048096	-36995622	+	L2b	LINE	L2	3220	3425	-1	1
chr14	70183792	70183793	chunk0062_206_1	38.1012	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	70183691	70184136	-36859582	+	MER83	LTR	ERV1	3	439	-9	1
chr14	70837142	70837143	chunk0062_211_1	11.3519	AR_DHT_Control	chr14	70836649	70837155	-36206563	+	L1ME1	LINE	L1	5315	5824	-355	1
chr14	70933585	70933586	chunk0062_215_1	17.97065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	70933351	70933650	-36110068	+	MER58B	DNA	hAT-Charlie	2	338	-3	1
chr14	70967166	70967167	chunk0062_220_1	39.66	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	70967084	70967203	-36076515	-	L1ME3	LINE	L1	0	6173	6050	1
chr14	71036695	71036696	chunk0062_223_1	34.13579	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	71036480	71036707	-36007011	+	Tigger3c	DNA	TcMar-Tigger	363	590	-12	1
chr14	71042099	71042100	chunk0062_226_1	17.25238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	71041828	71043475	-36000243	-	L1M2	LINE	L1	-3138	3707	2062	1
chr14	71060319	71060320	chunk0062_228_1	47.4477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	71060107	71063134	-35980584	+	Tigger3	DNA	TcMar-Tigger	31	3029	0	1
chr14	71063053	71063054	chunk0062_229_1	204.147	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	71060107	71063134	-35980584	+	Tigger3	DNA	TcMar-Tigger	31	3029	0	1
chr14	71123905	71123906	chunk0062_232_1	9.68843	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	71123752	71124110	-35919608	-	ERV3-16A3_I-int	LTR	ERVL	-176	5050	4683	1
chr14	71163269	71163270	chunk0062_234_1	102.67787	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	71163014	71163365	-35880353	-	LTR37B	LTR	ERV1	-121	347	6	1
chr14	71214422	71214423	chunk0062_236_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	71214354	71214497	-35829221	+	L2c	LINE	L2	3256	3387	0	1
chr14	71457199	71457200	chunk0062_247_1	14.6222	AR_DHT_Control	chr14	71457183	71457238	-35586480	-	L3	LINE	CR1	-2283	1816	1756	1
chr14	71638701	71638702	chunk0062_257_1	33.00097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	71637867	71638917	-35404801	+	L1MDa	LINE	L1	3676	4802	-1735	1
chr14	72061975	72061976	chunk0062_274_1	46.6424	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	72061878	72062821	-34980897	-	L2a	LINE	L2	-4	3422	2292	1
chr14	72129367	72129368	chunk0062_282_1	30.1421	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	72129267	72129378	-34914340	+	L2b	LINE	L2	3252	3374	-1	1
chr14	72433920	72433921	chunk0062_289_1	54.82922	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	72433715	72433940	-34609778	+	MIR	SINE	MIR	29	252	-10	1
chr14	72500612	72500613	chunk0062_291_1	24.24805	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	72500570	72500906	-34542812	+	LTR85a	LTR	Gypsy?	1	405	-379	1
chr14	72763402	72763403	chunk0062_297_1	9.21264	AR_DHT_Control	chr14	72762483	72763954	-34279764	+	L1ME1	LINE	L1	3992	5544	-775	1
chr14	73329898	73329899	chunk0062_321_1	15.3744	AR_DHT_Control	chr14	73329726	73329907	-33713811	+	MIR	SINE	MIR	38	261	-1	1
chr14	73339428	73339429	chunk0062_322_1	5.77445	AR_DHT_Control	chr14	73339296	73339548	-33704170	+	L2a	LINE	L2	2914	3171	-255	1
chr14	73359040	73359041	chunk0062_323_1	28.31471	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	73358894	73359070	-33684648	-	L3	LINE	CR1	-1	4098	3913	1
chr14	73411605	73411606	chunk0062_331_1	30.1994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	73411569	73411692	-33632026	+	L2b	LINE	L2	3244	3373	-2	1
chr14	73432306	73432307	chunk0062_335_1	58.8683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	73432182	73432465	-33611253	+	L1M5	LINE	L1	4639	4947	-1199	1
chr14	73679533	73679534	chunk0062_344_1	18.3425	AR_DHT_Control	chr14	73679514	73679565	-33364153	+	GA-rich	Low_complexity	Low_complexity	1	55	0	1
chr14	73679977	73679978	chunk0062_346_1	24.8543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	73679810	73680114	-33363604	-	L1M5	LINE	L1	-1134	5012	4687	1
chr14	73864111	73864112	chunk0062_357_1	14.3588	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	73864075	73864999	-33178719	-	L1MB7	LINE	L1	-293	5891	4958	1
chr14	73877954	73877955	chunk0062_359_1	9.21264	AR_DHT_Control	chr14	73877875	73878160	-33165558	+	AluJr4	SINE	Alu	1	300	-12	1
chr14	73894326	73894327	chunk0062_362_1	116.78502	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	73894075	73894407	-33149311	-	L2	LINE	L2	-1080	2339	1941	1
chr14	73901138	73901139	chunk0062_363_1	10.0576	AR_DHT_Control	chr14	73900953	73901140	-33142578	-	Kanga2_a	DNA	TcMar-Tc2	-238	650	472	1
chr14	73994820	73994821	chunk0062_368_1	4.81216	AR_DHT_Control	chr14	73994788	73995048	-33048670	+	L2a	LINE	L2	3088	3324	-102	1
chr14	74062951	74062952	chunk0062_369_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	74062921	74062982	-32980736	-	L2b	LINE	L2	-4	3383	3321	1
chr14	74293703	74293704	chunk0062_375_1	71.09849	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	74293652	74293950	-32749768	-	L2b	LINE	L2	-6	3369	3062	1
chr14	74373204	74373205	chunk0062_379_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	74373093	74373292	-32670426	+	Tigger3b	DNA	TcMar-Tigger	121	307	-924	1
chr14	74396635	74396636	chunk0062_380_1	7.56068	AR_DHT_Control	chr14	74396556	74396771	-32646947	+	MIR	SINE	MIR	44	261	-1	1
chr14	74534399	74534400	chunk0062_383_1	20.1397	AR_DHT_Control	chr14	74534374	74534703	-32509015	+	L2b	LINE	L2	3004	3342	-33	1
chr14	74680547	74680548	chunk0062_385_1	18.64002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	74680205	74680697	-32363021	+	L1MD1	LINE	L1	5320	5801	-441	1
chr14	74774120	74774121	chunk0062_390_1	9.21264	AR_DHT_Control	chr14	74774056	74774243	-32269475	-	MER47B	DNA	TcMar-Tigger	0	418	214	1
chr14	74796547	74796548	chunk0062_393_1	7.92366	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	74796246	74796612	-32247106	+	L2c	LINE	L2	2926	3335	-52	1
chr14	74804633	74804634	chunk0062_394_1	22.50018	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	74804266	74804803	-32238915	+	L2c	LINE	L2	2787	3359	-28	1
chr14	74846237	74846238	chunk0062_397_1	22.0356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	74846207	74846280	-32197438	-	MER135	DNA	DNA	-138	90	14	1
chr14	74945905	74945906	chunk0062_403_1	21.00999	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	74945825	74945927	-32097791	+	L2b	LINE	L2	3301	3426	0	1
chr14	74999476	74999477	chunk0062_405_1	10.8017	AR_DHT_Control	chr14	74998708	74999505	-32044213	+	L1ME3F	LINE	L1	5094	5885	-358	1
chr14	75171844	75171845	chunk0062_417_1	6.7814	AR_DHT_Control	chr14	75171817	75171929	-31871789	+	L1MC5a	LINE	L1	2023	2162	-615	1
chr14	75200707	75200708	chunk0062_421_1	20.46987	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	75200476	75200813	-31842905	+	L2a	LINE	L2	2986	3426	0	1
chr14	75206680	75206681	chunk0062_423_1	48.4445	AR_DHT_Control	chr14	75206636	75206738	-31836980	+	L2a	LINE	L2	3059	3153	-234	1
chr14	75352732	75352733	chunk0062_435_1	16.73643	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	75352643	75352881	-31690837	+	L2b	LINE	L2	3133	3372	-3	1
chr14	75389686	75389687	chunk0062_436_1	10.3842	AR_DHT_Control	chr14	75389577	75390702	-31653016	+	L1MC3	LINE	L1	5899	7024	-1179	1
chr14	75404729	75404730	chunk0062_439_1	12.3978	AR_DHT_Control	chr14	75404554	75404786	-31638932	+	Tigger15a	DNA	TcMar-Tigger	74	308	-407	1
chr14	75441162	75441163	chunk0062_443_1	23.86264	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	75441118	75441163	-31602555	+	(GA)n	Simple_repeat	Simple_repeat	1	45	0	1
chr14	75536114	75536115	chunk0062_446_1	385.0092	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr14	75536001	75536376	-31507342	-	L2a	LINE	L2	0	3426	3017	1
chr14	75761780	75761781	chunk0062_456_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	75758637	75762113	-31281605	+	L1ME2z	LINE	L1	2719	6437	-7	1
chr14	75854218	75854219	chunk0063_1_1	8.18895	AR_DHT_Control	chr14	75854079	75855014	-31188704	-	L1ME2	LINE	L1	-49	6115	5155	1
chr14	75985101	75985102	chunk0063_6_1	113.7989	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	75985064	75985199	-31058519	+	MIRb	SINE	MIR	69	207	-61	1
chr14	76088604	76088605	chunk0063_7_1	59.2118	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	76088552	76088737	-30954981	+	MER58B	DNA	hAT-Charlie	177	340	-1	1
chr14	76143590	76143591	chunk0063_8_1	8.18895	AR_DHT_Control	chr14	76143498	76143829	-30899889	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr14	76200019	76200020	chunk0063_11_1	12.568	AR_DHT_Control	chr14	76199614	76200353	-30843365	+	L1MB3	LINE	L1	5445	6181	-2	1
chr14	76221628	76221629	chunk0063_12_1	20.4662	AR_DHT_Control	chr14	76221036	76222131	-30821587	+	L1MC1	LINE	L1	5166	6313	-20	1
chr14	76226903	76226904	chunk0063_13_1	18.6851	AR_DHT_Control	chr14	76226849	76226934	-30816784	+	L1ME3A	LINE	L1	6080	6160	-13	1
chr14	76652057	76652058	chunk0063_25_1	68.87349	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	76651759	76652198	-30391520	+	LTR16C	LTR	ERVL	3	489	0	1
chr14	76684800	76684801	chunk0063_30_1	50.809	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	76684698	76685494	-30358224	-	L1MA9	LINE	L1	-817	5323	4524	1
chr14	76849031	76849032	chunk0063_41_1	6.48643	AR_DHT_Control	chr14	76848623	76849139	-30194579	-	L2a	LINE	L2	-1534	1885	1313	1
chr14	76905199	76905200	chunk0063_44_1	82.57	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	76905033	76905213	-30138505	-	MIRb	SINE	MIR	-34	234	59	1
chr14	77034289	77034290	chunk0063_54_1	20.76298	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	77034278	77034300	-30009418	+	(GGAG)n	Simple_repeat	Simple_repeat	1	22	0	1
chr14	77204457	77204458	chunk0063_64_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	77204400	77204468	-29839250	+	MIR3	SINE	MIR	125	193	-15	1
chr14	77314258	77314259	chunk0063_65_1	12.2295	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	77314096	77314508	-29729210	+	LTR40c	LTR	ERVL	5	465	0	1
chr14	77470453	77470454	chunk0063_69_1	7.69414	AR_DHT_Control	chr14	77470441	77470481	-29573237	-	L2c	LINE	L2	-20	3367	3328	1
chr14	77590867	77590868	chunk0063_75_1	4.51289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	77590740	77590915	-29452803	-	L2a	LINE	L2	-158	3268	3053	1
chr14	77699123	77699124	chunk0063_79_1	10.2385	AR_DHT_Control	chr14	77699072	77699185	-29344533	-	MER58A	DNA	hAT-Charlie	-62	162	49	1
chr14	77946268	77946269	chunk0063_86_1	5.47663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	77946236	77946298	-29097420	-	L2c	LINE	L2	-50	3337	3275	1
chr14	77981898	77981899	chunk0063_87_1	8.21408	AR_DHT_Control	chr14	77981830	77981971	-29061747	+	MER53	DNA	hAT	5	155	-38	1
chr14	78541998	78541999	chunk0063_96_1	73.09307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	78536608	78542824	-28500894	-	L1PA6	LINE	L1	-1	6153	3	1
chr14	78654803	78654804	chunk0063_101_1	13.99675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	78654735	78654825	-28388893	+	L2a	LINE	L2	3336	3421	-5	1
chr14	78851412	78851413	chunk0063_105_1	24.17533	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	78851409	78851741	-28191977	-	LTR79	LTR	ERVL	-116	411	1	1
chr14	78951597	78951598	chunk0063_107_1	9.83323	AR_DHT_Control	chr14	78951466	78951715	-28092003	+	L2a	LINE	L2	3133	3363	-63	1
chr14	79224757	79224758	chunk0063_115_1	28.2862	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	79224598	79225000	-27818718	+	MLT1C	LTR	ERVL-MaLR	17	467	0	1
chr14	79285471	79285472	chunk0063_118_1	50.71122	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	79285417	79285830	-27757888	-	MLT1B	LTR	ERVL-MaLR	0	390	3	1
chr14	79329575	79329576	chunk0063_124_1	16.8425	AR_DHT_Control	chr14	79329483	79329654	-27714064	-	MER58A	DNA	hAT-Charlie	-49	175	2	1
chr14	79382442	79382443	chunk0063_129_1	5.30168	AR_DHT_Control	chr14	79382213	79382585	-27661133	-	MER83C	LTR	ERV1	-4	369	1	1
chr14	79405989	79405990	chunk0063_131_1	17.7052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	79405944	79406020	-27637698	-	L2a	LINE	L2	-7	3419	3337	1
chr14	79419780	79419781	chunk0063_132_1	108.1548	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	79419709	79419858	-27623860	+	MIRb	SINE	MIR	110	268	0	1
chr14	79481590	79481591	chunk0063_138_1	11.5684	AR_DHT_Control	chr14	79481333	79481613	-27562105	-	Tigger3a	DNA	TcMar-Tigger	-3	345	62	1
chr14	79633108	79633109	chunk0063_145_1	8.41215	AR_DHT_Control	chr14	79632895	79633146	-27410572	-	MIRb	SINE	MIR	-4	264	1	1
chr14	80158618	80158619	chunk0063_161_1	7.91804	AR_DHT_Control	chr14	80158451	80158708	-26885010	-	HAL1	LINE	L1	-37	2470	2182	1
chr14	80277203	80277204	chunk0063_165_1	81.9425	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	80277164	80277216	-26766502	-	MIRb	SINE	MIR	-19	249	198	1
chr14	80325187	80325188	chunk0063_171_1	150.8153	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	80325121	80325212	-26718506	-	L2a	LINE	L2	-13	3413	3263	1
chr14	80468785	80468786	chunk0063_177_1	19.3054	AR_DHT_Control	chr14	80467814	80471971	-26571747	+	HERVK22-int	LTR	ERVK	2678	6837	0	1
chr14	80601610	80601611	chunk0063_182_1	8.82096	AR_DHT_Control	chr14	80601541	80601743	-26441975	-	Tigger3c	DNA	TcMar-Tigger	-75	527	345	1
chr14	80637895	80637896	chunk0063_187_1	28.10873	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	80637645	80638111	-26405607	+	MLT1D	LTR	ERVL-MaLR	10	505	0	1
chr14	80727633	80727634	chunk0063_189_1	11.872	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	80727471	80728529	-26315189	+	L1PA15	LINE	L1	5084	6165	0	1
chr14	80878681	80878682	chunk0063_192_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	80877705	80879927	-26163791	+	L1MA2	LINE	L1	618	2667	-4501	1
chr14	80908059	80908060	chunk0063_193_1	17.17332	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	80908039	80909288	-26134430	-	L1MEg	LINE	L1	-4797	1287	2	1
chr14	81400921	81400922	chunk0063_212_1	181.441	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	81400737	81400955	-25642763	+	MIRb	SINE	MIR	11	247	-15	1
chr14	81509809	81509810	chunk0063_218_1	7.80475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	81509659	81509958	-25533760	+	L1ME3G	LINE	L1	228	524	-400	1
chr14	81517584	81517585	chunk0063_219_1	4.29711	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	81517024	81517892	-25525826	+	MER68-int	LTR	ERVL	8	899	-2091	1
chr14	81551907	81551908	chunk0063_223_1	6.94032	AR_DHT_Control	chr14	81551589	81552253	-25491465	+	L1ME2	LINE	L1	5285	5949	-215	1
chr14	81650619	81650620	chunk0063_230_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	81650502	81650869	-25392849	+	MLT1N2	LTR	ERVL-MaLR	44	432	-130	1
chr14	81796497	81796498	chunk0063_233_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	81796285	81796504	-25247214	-	MER58A	DNA	hAT-Charlie	-7	217	3	1
chr14	81903417	81903418	chunk0063_234_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	81900702	81904354	-25139364	-	L1MA8	LINE	L1	-3356	4206	460	1
chr14	82314160	82314161	chunk0063_240_1	86.1805	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	82314044	82314259	-24729459	+	MER58A	DNA	hAT-Charlie	2	223	-1	1
chr14	82380108	82380109	chunk0063_244_1	9.80886	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	82379589	82380727	-24662991	+	L1MB8	LINE	L1	3413	4555	-2451	1
chr14	82590299	82590300	chunk0063_251_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	82589100	82590824	-24452894	+	MLT1A1-int	LTR	ERVL-MaLR	2	1735	0	1
chr14	82705650	82705651	chunk0063_252_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	82702269	82705859	-24337859	-	L1PA13	LINE	L1	-1905	6236	2626	1
chr14	82725012	82725013	chunk0063_253_1	5.12066	AR_DHT_Control	chr14	82724804	82725290	-24318428	+	(GT)n	Simple_repeat	Simple_repeat	1	511	0	1
chr14	83419455	83419456	chunk0063_260_1	8.27376	AR_DHT_Control	chr14	83419441	83419464	-23624254	+	(TTTG)n	Simple_repeat	Simple_repeat	1	23	0	1
chr14	83434906	83434907	chunk0063_261_1	5.55081	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	83434156	83434998	-23608720	-	L1PB1	LINE	L1	-371	5780	4939	1
chr14	84031713	84031714	chunk0063_271_1	15.2573	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	84031621	84031831	-23011887	+	L1MC4a	LINE	L1	5729	5950	-1932	1
chr14	84302894	84302895	chunk0063_284_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84302627	84303495	-22740223	+	LTR27E	LTR	ERV1	190	1077	0	1
chr14	84315253	84315254	chunk0063_288_1	11.28093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	84315175	84318370	-22725348	+	L1MA4A	LINE	L1	720	4950	-2615	1
chr14	84355915	84355916	chunk0063_289_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	84354623	84356603	-22687115	+	L1MA3	LINE	L1	2835	4839	-2726	1
chr14	84500960	84500961	chunk0063_295_1	9.21264	AR_DHT_Control	chr14	84500659	84501036	-22542682	-	HERVH-int	LTR	ERV1	0	7713	7322	1
chr14	84520762	84520763	chunk0063_296_1	8.7059	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84519811	84521478	-22522240	-	L1MA3	LINE	L1	-5799	1766	17	1
chr14	84579222	84579223	chunk0063_297_1	5.21805	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84578745	84579552	-22464166	+	LTR27D	LTR	ERV1	1	1020	-57	1
chr14	84585254	84585255	chunk0063_298_1	7.36432	AR_DHT_Control	chr14	84583852	84585439	-22458279	+	L1PA16	LINE	L1	4540	6154	-12	1
chr14	84650472	84650473	chunk0063_301_1	4.5547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	84649637	84653207	-22390511	-	L1PA7	LINE	L1	-5	6464	2881	1
chr14	84697957	84697958	chunk0063_305_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	84697846	84698039	-22345679	+	MLT1A0	LTR	ERVL-MaLR	162	365	0	1
chr14	84803336	84803337	chunk0063_307_1	31.1122	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	84803016	84803842	-22239876	-	MER6	DNA	TcMar-Tigger	0	865	32	1
chr14	84959372	84959373	chunk0063_310_1	7.3267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	84959272	84959573	-22084145	+	MLT1H1	LTR	ERVL-MaLR	182	555	0	1
chr14	85128619	85128620	chunk0063_317_1	79.36704	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	85128251	85128635	-21915083	+	L2a	LINE	L2	2984	3408	-18	1
chr14	85236072	85236073	chunk0063_329_1	16.30791	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	85235967	85236122	-21807596	+	L2c	LINE	L2	3174	3309	-78	1
chr14	85372332	85372333	chunk0063_342_1	11.1716	AR_DHT_Control	chr14	85372208	85372399	-21671319	+	MLT1K	LTR	ERVL-MaLR	241	428	-167	1
chr14	85415490	85415491	chunk0063_347_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	85414519	85415583	-21628135	-	L2a	LINE	L2	-64	3362	2243	1
chr14	85812784	85812785	chunk0063_363_1	153.8111	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	85812540	85812792	-21230926	+	L2a	LINE	L2	3010	3285	-141	1
chr14	85871103	85871104	chunk0063_367_1	169.1124	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	85870930	85871422	-21172296	-	L1MB8	LINE	L1	-6	6172	5654	1
chr14	86040201	86040202	chunk0063_373_1	28.7034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	86040045	86040300	-21003418	+	L1MC4	LINE	L1	2147	2399	-3816	1
chr14	86248197	86248198	chunk0063_376_1	8.26412	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	86248029	86248814	-20794904	+	L1ME3A	LINE	L1	5313	6160	-13	1
chr14	86390182	86390183	chunk0063_382_1	5.16131	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	86389942	86391545	-20652173	+	MER52A	LTR	ERV1	1	1755	0	1
chr14	86570633	86570634	chunk0063_383_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	86569324	86571118	-20472600	-	L1PBa	LINE	L1	-4648	2215	351	1
chr14	86730130	86730131	chunk0063_384_1	5.6425	AR_DHT_Control	chr14	86730105	86730508	-20313210	+	L1MC4	LINE	L1	6692	7098	-944	1
chr14	86748268	86748269	chunk0063_385_1	33.9944	AR_DHT_Control	chr14	86745042	86751140	-20292578	-	L1PA6	LINE	L1	-15	6139	1	1
chr14	86766858	86766859	chunk0063_386_1	6.48643	AR_DHT_Control	chr14	86766419	86766933	-20276785	-	MLT1H	LTR	ERVL-MaLR	0	549	1	1
chr14	86919424	86919425	chunk0063_388_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	86919049	86919483	-20124235	+	Charlie29a	DNA	hAT-Charlie	214	652	-67	1
chr14	87021014	87021015	chunk0063_389_1	11.1716	AR_DHT_Control	chr14	87021012	87021073	-20022645	+	(TACATA)n	Simple_repeat	Simple_repeat	1	62	0	1
chr14	88024551	88024552	chunk0063_401_1	16.55774	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	88024340	88025306	-19018412	+	LTR5B	LTR	ERVK	2	1002	0	1
chr14	88412109	88412110	chunk0063_413_1	27.72016	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	88411707	88412256	-18631462	-	L1PA15-16	LINE	L1	-363	6506	5966	1
chr14	88417771	88417772	chunk0063_416_1	151.0273	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	88417607	88418462	-18625256	-	L1MCb	LINE	L1	-2273	4668	3715	1
chr14	88584581	88584582	chunk0063_428_1	23.9504	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	88584193	88585005	-18458713	+	Tigger2	DNA	TcMar-Tigger	1	824	-1894	1
chr14	88590109	88590110	chunk0063_430_1	8.09329	AR_DHT_Control	chr14	88589847	88590152	-18453566	+	AluSz6	SINE	Alu	1	305	-7	1
chr14	88708428	88708429	chunk0063_437_1	6.48643	AR_DHT_Control	chr14	88708239	88708485	-18335233	+	L2c	LINE	L2	3114	3373	-14	1
chr14	88780240	88780241	chunk0063_438_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	88779956	88780252	-18263466	-	AluSz	SINE	Alu	-19	293	1	1
chr14	89016045	89016046	chunk0063_447_1	12.7804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	89016025	89016065	-18027653	+	(GT)n	Simple_repeat	Simple_repeat	1	40	0	1
chr14	89053545	89053546	chunk0063_453_1	184.5847	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89053204	89054067	-17989651	+	L1MC1	LINE	L1	5255	6151	-357	1
chr14	89090040	89090041	chunk0063_454_1	18.95558	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89089900	89090097	-17953621	-	MER58A	DNA	hAT-Charlie	-32	192	2	1
chr14	89242186	89242187	chunk0064_9_1	24.7674	AR_DHT_Control	chr14	89241843	89242379	-17801339	+	MLT1O	LTR	ERVL-MaLR	15	531	-11	1
chr14	89247934	89247935	chunk0064_10_1	11.0426	AR_DHT_Control	chr14	89247584	89248297	-17795421	+	L2a	LINE	L2	2652	3412	-14	1
chr14	89355629	89355630	chunk0064_22_1	18.2507	AR_DHT_Control	chr14	89355547	89355796	-17687922	+	MER112	DNA	hAT-Charlie	1	261	0	1
chr14	89474663	89474664	chunk0064_31_1	14.60406	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89474565	89474803	-17568915	+	Mam_R4	LINE	Dong-R4	3356	3617	-192	1
chr14	89587039	89587040	chunk0064_36_1	69.359	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89586943	89587370	-17456348	-	MLT2D	LTR	ERVL	0	414	10	1
chr14	89604350	89604351	chunk0064_38_1	7.80475	AR_DHT_Control	chr14	89604240	89604406	-17439312	+	L1MEd	LINE	L1	875	1032	-6244	1
chr14	89665507	89665508	chunk0064_41_1	20.56505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89665384	89665562	-17378156	-	Charlie25	DNA	hAT-Charlie	-1075	1449	1261	1
chr14	89835231	89835232	chunk0064_50_1	15.99504	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	89835059	89835251	-17208467	-	L2	LINE	L2	-1890	1529	1309	1
chr14	89857163	89857164	chunk0064_51_1	14.11679	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89857071	89857199	-17186519	+	MIRb	SINE	MIR	51	180	-88	1
chr14	89895489	89895490	chunk0064_52_1	19.00932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	89895243	89896103	-17147615	+	L1ME3F	LINE	L1	4518	5487	-756	1
chr14	90037565	90037566	chunk0064_61_1	94.8518	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	90037507	90038153	-17005565	-	L1MC4	LINE	L1	-6	8036	7340	1
chr14	90053255	90053256	chunk0064_62_1	57.3447	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	90052621	90053322	-16990396	+	L1ME2z	LINE	L1	97	826	-5310	1
chr14	90055009	90055010	chunk0064_63_1	30.1826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	90054800	90055757	-16987961	+	L1MC1	LINE	L1	5341	6333	0	1
chr14	90293954	90293955	chunk0064_74_1	27.0334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	90293856	90294204	-16749514	+	L1MD2	LINE	L1	5547	5906	-453	1
chr14	90501342	90501343	chunk0064_80_1	37.0304	AR_DHT_Control	chr14	90501324	90501440	-16542278	+	L2a	LINE	L2	3301	3425	-1	1
chr14	90716661	90716662	chunk0064_86_1	22.20955	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	90716636	90716697	-16327021	+	MamRep434	DNA	TcMar-Tigger	313	377	-49	1
chr14	90719498	90719499	chunk0064_87_1	22.1969	AR_DHT_Control	chr14	90719299	90719809	-16323909	-	LTR87	LTR	ERVL?	-55	569	12	1
chr14	90858715	90858716	chunk0064_95_1	17.05659	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	90858631	90858862	-16184856	+	L1ME3	LINE	L1	235	463	-5779	1
chr14	90975408	90975409	chunk0064_96_1	8.27376	AR_DHT_Control	chr14	90975328	90975688	-16068030	+	MLT1B	LTR	ERVL-MaLR	1	390	0	1
chr14	90981738	90981739	chunk0064_97_1	5.55081	AR_DHT_Control	chr14	90981410	90982316	-16061402	+	Charlie24	DNA	hAT-Charlie	62	1061	-1389	1
chr14	91055369	91055370	chunk0064_100_1	6.04605	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91054803	91055498	-15988220	+	L1MB8	LINE	L1	5155	5859	-319	1
chr14	91087784	91087785	chunk0064_103_1	15.07692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91087330	91087908	-15955810	+	LTR10C	LTR	ERV1	1	580	-11	1
chr14	91105825	91105826	chunk0064_105_1	10.8483	AR_DHT_Control	chr14	91105745	91106025	-15937693	-	Tigger3a	DNA	TcMar-Tigger	-13	335	62	1
chr14	91155150	91155151	chunk0064_109_1	29.98148	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	91154701	91155282	-15888436	+	L2c	LINE	L2	2730	3354	-33	1
chr14	91164763	91164764	chunk0064_114_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91164384	91165089	-15878629	-	L1M1	LINE	L1	-5477	2088	1373	1
chr14	91266145	91266146	chunk0064_116_1	30.0147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91265963	91266296	-15777422	+	LTR29	LTR	ERV1	160	527	-95	1
chr14	91402744	91402745	chunk0064_132_1	4.29711	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91402597	91402813	-15640905	+	L1ME3Cz	LINE	L1	756	968	-29	1
chr14	91509235	91509236	chunk0064_138_1	52.50761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	91509111	91509250	-15534468	-	MIR1_Amn	SINE	MIR	-75	155	27	1
chr14	91546364	91546365	chunk0064_140_1	50.1205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91545872	91546380	-15497338	+	L1MD2	LINE	L1	5260	5802	-557	1
chr14	91609424	91609425	chunk0064_144_1	99.0591	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	91608845	91609740	-15433978	-	Tigger2b_Pri	DNA	TcMar-Tigger	-1	1067	142	1
chr14	91760586	91760587	chunk0064_150_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	91760297	91760817	-15282901	+	L1PB4	LINE	L1	1629	2654	-5211	1
chr14	91817086	91817087	chunk0064_153_1	6.9031	AR_DHT_Control	chr14	91816694	91817302	-15226416	-	L1MC5	LINE	L1	-1168	4978	4348	1
chr14	91822147	91822148	chunk0064_154_1	10.4206	AR_DHT_Control	chr14	91820192	91822409	-15221309	+	L1ME2	LINE	L1	3879	6084	-253	1
chr14	91828417	91828418	chunk0064_155_1	6.231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	91828188	91828898	-15214820	-	L1MC5	LINE	L1	-4	9300	8564	1
chr14	91829711	91829712	chunk0064_156_1	15.14162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	91828908	91829839	-15213879	-	L1MEd	LINE	L1	-4683	2419	1514	1
chr14	92100661	92100662	chunk0064_163_1	9.40261	AR_DHT_Control	chr14	92099955	92100893	-14942825	+	L1ME3A	LINE	L1	5293	6168	-5	1
chr14	92290794	92290795	chunk0064_167_1	6.98682	AR_DHT_Control	chr14	92290522	92290819	-14752899	-	L3	LINE	CR1	-2	4097	3811	1
chr14	92348189	92348190	chunk0064_171_1	18.11034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	92348145	92348326	-14695392	+	MIRb	SINE	MIR	77	267	-1	1
chr14	92608333	92608334	chunk0064_176_1	15.94222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	92607615	92608348	-14435370	+	L1MD2	LINE	L1	5593	6341	-18	1
chr14	92619823	92619824	chunk0064_178_1	22.08085	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	92619725	92620127	-14423591	-	MER41-int	LTR	ERV1	-2774	3172	2820	1
chr14	92659919	92659920	chunk0064_180_1	104.77809	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	92659741	92660153	-14383565	-	MLT1C	LTR	ERVL-MaLR	0	467	1	1
chr14	92694250	92694251	chunk0064_182_1	7.28745	AR_DHT_Control	chr14	92693822	92694339	-14349379	+	LTR40a	LTR	ERVL	1	519	0	1
chr14	92698532	92698533	chunk0064_183_1	22.9274	AR_DHT_Control	chr14	92697797	92698773	-14344945	+	L1MC3	LINE	L1	6001	7014	-771	1
chr14	92726513	92726514	chunk0064_190_1	66.1654	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	92726463	92726579	-14317139	-	L2	LINE	L2	-3223	196	68	1
chr14	92736131	92736132	chunk0064_192_1	61.7392	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	92735961	92736313	-14307405	-	MER41C	LTR	ERV1	0	521	215	1
chr14	92737844	92737845	chunk0064_194_1	19.56763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	92737764	92737866	-14305852	-	MER58A	DNA	hAT-Charlie	-112	112	4	1
chr14	92987616	92987617	chunk0064_205_1	169.9527	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	92987602	92987724	-14055994	+	MIRb	SINE	MIR	23	153	-115	1
chr14	93026913	93026914	chunk0064_209_1	50.3025	AR_DHT_Control	chr14	93026903	93027104	-14016614	+	MER6B	DNA	TcMar-Tigger	1	210	0	1
chr14	93065468	93065469	chunk0064_213_1	23.70322	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	93065403	93065656	-13978062	-	MIR	SINE	MIR	0	262	9	1
chr14	93353812	93353813	chunk0064_217_1	12.9759	AR_DHT_Control	chr14	93353730	93353884	-13689834	-	L2a	LINE	L2	-4	3422	3242	1
chr14	93396705	93396706	chunk0064_218_1	10.1791	AR_DHT_Control	chr14	93395642	93396767	-13646951	-	L1M4	LINE	L1	-5598	1919	807	1
chr14	93461739	93461740	chunk0064_219_1	19.31641	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	93461677	93461971	-13581747	-	L2c	LINE	L2	-88	3299	3021	1
chr14	93901956	93901957	chunk0064_228_1	47.6203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	93901826	93902305	-13141413	+	MER87	LTR	ERV1	80	539	-2	1
chr14	94070972	94070973	chunk0064_229_1	16.1385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94065490	94071367	-12972351	+	L1PB1	LINE	L1	252	6220	-647	1
chr14	94121227	94121228	chunk0064_231_1	23.7986	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94120508	94121304	-12922414	+	MER54A	LTR	ERVL	1	869	-32	1
chr14	94339398	94339399	chunk0064_238_1	15.2872	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94338587	94339526	-12704192	-	L1MC3	LINE	L1	-1127	6658	5735	1
chr14	94356861	94356862	chunk0064_239_1	16.66761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94356372	94356906	-12686812	+	L2a	LINE	L2	2865	3421	-5	1
chr14	94411861	94411862	chunk0064_244_1	22.91311	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	94411449	94412016	-12631702	-	LTR41	LTR	ERVL	-147	621	1	1
chr14	94438825	94438826	chunk0064_245_1	19.7964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	94438763	94438903	-12604815	+	L1MEg	LINE	L1	4702	4847	-1299	1
chr14	94519635	94519636	chunk0064_249_1	4.96796	AR_DHT_Control	chr14	94518911	94520329	-12523389	+	(GGT)n	Simple_repeat	Simple_repeat	1	1421	0	1
chr14	94564950	94564951	chunk0064_252_1	165.673	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	94564810	94564964	-12478754	-	L1ME4a	LINE	L1	-16	6108	5949	1
chr14	94655354	94655355	chunk0064_260_1	123.43449	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94655257	94655472	-12388246	+	L1M5	LINE	L1	4403	4621	-1525	1
chr14	94710143	94710144	chunk0064_262_1	59.6477	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	94710087	94710609	-12333109	-	L1ME3G	LINE	L1	-391	5733	5520	1
chr14	94730969	94730970	chunk0064_264_1	26.0635	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	94730774	94731636	-12312082	+	L1MC3	LINE	L1	6871	7726	-59	1
chr14	95042936	95042937	chunk0064_272_1	7.08265	AR_DHT_Control	chr14	95042688	95043238	-12000480	+	L1MD2	LINE	L1	5765	6344	-15	1
chr14	95146208	95146209	chunk0064_277_1	6.69534	AR_DHT_Control	chr14	95146085	95146813	-11896905	+	LTR27C	LTR	ERV1	1	762	-5	1
chr14	95157357	95157358	chunk0064_278_1	15.3276	Merged_Lncap_AR_Veh	chr14	95157309	95157360	-11886358	+	(GCC)n	Simple_repeat	Simple_repeat	1	51	0	1
chr14	95168894	95168895	chunk0064_279_1	12.1886	AR_DHT_Control	chr14	95168646	95169254	-11874464	-	L2c	LINE	L2	-2	3385	2751	1
chr14	95291990	95291991	chunk0064_289_1	16.39333	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	95291964	95292144	-11751574	-	MIR	SINE	MIR	-3	259	78	1
chr14	95302837	95302838	chunk0064_291_1	6.13293	AR_DHT_Control	chr14	95302666	95302889	-11740829	-	MIRb	SINE	MIR	-47	221	3	1
chr14	95304705	95304706	chunk0064_292_1	18.5948	AR_DHT_Control	chr14	95304359	95305077	-11738641	+	HAL1	LINE	L1	219	895	-1612	1
chr14	95501295	95501296	chunk0064_300_1	9.39982	AR_DHT_Control	chr14	95501202	95501409	-11542309	+	L2a	LINE	L2	3216	3426	0	1
chr14	95503387	95503388	chunk0064_301_1	11.3575	AR_DHT_Control	chr14	95503319	95503494	-11540224	-	MIR	SINE	MIR	0	262	68	1
chr14	95571440	95571441	chunk0064_306_1	6.48643	AR_DHT_Control	chr14	95571353	95571486	-11472232	-	MER58A	DNA	hAT-Charlie	-84	140	4	1
chr14	95619965	95619966	chunk0064_307_1	7.29426	AR_DHT_Control	chr14	95619853	95620047	-11423671	-	MIR	SINE	MIR	0	262	41	1
chr14	95649477	95649478	chunk0064_308_1	16.9845	AR_DHT_Control	chr14	95649309	95649688	-11394030	-	L2c	LINE	L2	0	3387	2990	1
chr14	95971803	95971804	chunk0064_321_1	8.79298	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	95971764	95972138	-11071580	+	MSTD	LTR	ERVL-MaLR	1	396	0	1
chr14	96029421	96029422	chunk0064_323_1	30.80913	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	96029239	96029422	-11014296	-	MIRb	SINE	MIR	-10	258	38	1
chr14	96063653	96063654	chunk0064_325_1	112.292	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	96063648	96064363	-10979355	+	L1PB	LINE	L1	5069	5790	-361	1
chr14	96252001	96252002	chunk0064_327_1	7.16019	AR_DHT_Control	chr14	96251928	96252247	-10791471	-	L2a	LINE	L2	-4	3422	2995	1
chr14	96391923	96391924	chunk0064_329_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	96391796	96392034	-10651684	+	(GCCCC)n	Simple_repeat	Simple_repeat	1	243	0	1
chr14	96431557	96431558	chunk0064_331_1	57.13304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	96430487	96432702	-10611016	-	L1PA5	LINE	L1	-2203	4116	2027	1
chr14	96473967	96473968	chunk0064_332_1	26.722	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	96473956	96474029	-10569689	-	LTR4	LTR	ERV1	-195	401	335	1
chr14	96515675	96515676	chunk0064_334_1	9.63948	AR_DHT_Control	chr14	96515659	96515735	-10527983	-	L4_A_Mam	LINE	RTE-X	-268	4722	4647	1
chr14	96661749	96661750	chunk0064_343_1	42.05124	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	96661632	96661809	-10381909	-	MER91A	DNA	hAT-Tip100	0	196	1	1
chr14	96690925	96690926	chunk0064_345_1	13.90362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	96690888	96691008	-10352710	-	L2b	LINE	L2	-2	3373	3248	1
chr14	96708496	96708497	chunk0064_347_1	12.1955	AR_DHT_Control	chr14	96708372	96709474	-10334244	+	(AGT)n	Simple_repeat	Simple_repeat	1	1109	0	1
chr14	96827940	96827941	chunk0064_351_1	12.3389	AR_DHT_Control	chr14	96827847	96828378	-10215340	-	L1ME3	LINE	L1	-20	6142	5477	1
chr14	96837107	96837108	chunk0064_353_1	54.7496	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	96836828	96837167	-10206551	+	L2a	LINE	L2	3042	3422	-4	1
chr14	96839459	96839460	chunk0064_355_1	50.8229	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	96838888	96839831	-10203887	-	L1ME2	LINE	L1	-7	6330	5359	1
chr14	96859332	96859333	chunk0064_358_1	12.8831	AR_DHT_Control	chr14	96858528	96859534	-10184184	-	L1ME3A	LINE	L1	-1132	5014	3985	1
chr14	96983986	96983987	chunk0064_359_1	4.89968	AR_DHT_Control	chr14	96983942	96984044	-10059674	+	(CTGTT)n	Simple_repeat	Simple_repeat	1	102	0	1
chr14	97262317	97262318	chunk0064_362_1	28.0881	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	97261444	97263107	-9780611	+	L1ME1	LINE	L1	4655	6354	-263	1
chr14	97851011	97851012	chunk0064_365_1	6.37684	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	97850970	97851118	-9192600	+	MIRc	SINE	MIR	2	152	-116	1
chr14	98304751	98304752	chunk0064_368_1	419.0871	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr14	98304285	98305106	-8738612	+	L1ME3F	LINE	L1	5534	6398	-236	1
chr14	98656598	98656599	chunk0064_374_1	34.011	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	98656382	98657016	-8386702	+	L1MEa	LINE	L1	987	1684	-4558	1
chr14	98909546	98909547	chunk0064_383_1	32.5879	AR_DHT_Control	chr14	98909545	98909795	-8133923	+	MIR	SINE	MIR	5	258	-4	1
chr14	98976008	98976009	chunk0064_384_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	98975692	98976497	-8067221	+	L1MEc	LINE	L1	2201	3027	-3292	1
chr14	99004382	99004383	chunk0064_386_1	90.31308	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99004262	99004679	-8039039	-	MER45B	DNA	hAT-Tip100	-7	1033	606	1
chr14	99076617	99076618	chunk0064_388_1	23.9533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	99076602	99076807	-7966911	+	L1ME4c	LINE	L1	455	679	-151	1
chr14	99274759	99274760	chunk0064_396_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99274709	99274797	-7768921	+	(CCT)n	Simple_repeat	Simple_repeat	1	89	0	1
chr14	99350679	99350680	chunk0064_397_1	7.38866	AR_DHT_Control	chr14	99350648	99350797	-7692921	+	MIRb	SINE	MIR	21	202	-66	1
chr14	99556073	99556074	chunk0064_410_1	7.09019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99555515	99556136	-7487582	+	L1MC4	LINE	L1	7001	7684	-358	1
chr14	99604247	99604248	chunk0064_418_1	5.82105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99604225	99604272	-7439446	+	(CCGCCCCG)n	Simple_repeat	Simple_repeat	1	49	0	1
chr14	99605910	99605911	chunk0064_419_1	6.00386	AR_DHT_Control	chr14	99605509	99606066	-7437652	-	L2a	LINE	L2	-3	3423	2759	1
chr14	99616231	99616232	chunk0064_420_1	21.8431	AR_DHT_Control	chr14	99616053	99616368	-7427350	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	1
chr14	99685520	99685521	chunk0064_422_1	72.5804	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	99685330	99685624	-7358094	+	L2c	LINE	L2	3052	3387	0	1
chr14	99847241	99847242	chunk0064_425_1	47.1245	AR_DHT_Control	chr14	99846963	99847348	-7196370	-	L1ME1	LINE	L1	-3107	3039	2592	1
chr14	99862473	99862474	chunk0064_428_1	146.7526	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	99861791	99864518	-7179200	-	L1MC3	LINE	L1	0	7785	4941	1
chr14	99863744	99863745	chunk0064_429_1	40.9025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99861791	99864518	-7179200	-	L1MC3	LINE	L1	0	7785	4941	1
chr14	99928396	99928397	chunk0064_434_1	8.46955	AR_DHT_Control	chr14	99928248	99928544	-7115174	-	L1MC5	LINE	L1	-983	8321	8256	1
chr14	99956739	99956740	chunk0064_436_1	19.4061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	99956472	99956776	-7086942	-	L1M5	LINE	L1	-2733	3413	3090	1
chr14	99980638	99980639	chunk0065_188_1	38.8823	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	99980278	99980668	-7063050	-	LTR86C	LTR	ERVL	-134	487	83	1
chr14	100012042	100012043	chunk0065_190_1	17.84809	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	100011872	100012088	-7031630	-	MIRc	SINE	MIR	-19	249	31	1
chr14	100091435	100091436	chunk0065_204_1	7.57442	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	100091049	100091952	-6951766	+	MER21A	LTR	ERVL	1	882	-56	1
chr14	100104045	100104046	chunk0065_206_1	268.7908	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	100103993	100104144	-6939574	+	MIRb	SINE	MIR	99	268	0	1
chr14	100156534	100156535	chunk0065_209_1	46.028	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	100156454	100156643	-6887075	-	MIR	SINE	MIR	-49	213	9	1
chr14	100173017	100173018	chunk0065_210_1	8.52761	AR_DHT_Control	chr14	100172869	100173125	-6870593	+	HERVL74-int	LTR	ERVL	5376	5639	-46	1
chr14	100210113	100210114	chunk0065_212_1	31.71022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	100210093	100210201	-6833517	-	L4_A_Mam	LINE	RTE-X	-158	4832	4735	1
chr14	100302793	100302794	chunk0065_218_1	20.45034	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	100302730	100303233	-6740485	-	L1MEj	LINE	L1	-951	1209	663	1
chr14	100762271	100762272	chunk0065_224_1	69.05701	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	100761960	100762498	-6281220	+	L1MB8	LINE	L1	5780	6349	-2	1
chr14	100899727	100899728	chunk0065_228_1	5.62266	AR_DHT_Control	chr14	100899610	100899838	-6143880	+	MIRb	SINE	MIR	35	262	-6	1
chr14	101032681	101032682	chunk0065_232_1	10.6706	AR_DHT_Control	chr14	101032278	101032737	-6010981	+	MLT1K	LTR	ERVL-MaLR	163	572	-23	1
chr14	101053319	101053320	chunk0065_236_1	41.15754	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	101053242	101053773	-5989945	-	L2a	LINE	L2	-6	3420	2787	1
chr14	101315844	101315845	chunk0065_242_1	8.0668	AR_DHT_Control	chr14	101315698	101316286	-5727432	+	LTR10A	LTR	ERV1	1	547	-62	1
chr14	101323639	101323640	chunk0065_243_1	30.1679	AR_DHT_Control	chr14	101323523	101324134	-5719584	+	LTR10A	LTR	ERV1	1	582	-27	1
chr14	101484451	101484452	chunk0065_250_1	16.24985	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	101483451	101484523	-5559195	+	L1MA4	LINE	L1	5181	6289	-11	1
chr14	101722306	101722307	chunk0065_257_1	12.47616	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	101722082	101722338	-5321380	+	L1ME3Cz	LINE	L1	5218	5432	-692	1
chr14	101749545	101749546	chunk0065_259_1	22.0068	AR_DHT_Control	chr14	101744246	101750388	-5293330	-	L1PA6	LINE	L1	-11	6143	1	1
chr14	101792772	101792773	chunk0065_261_1	28.8739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	101792361	101792872	-5250846	-	L1MC5a	LINE	L1	-784	1993	1465	1
chr14	101835097	101835098	chunk0065_263_1	17.42132	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	101834479	101835469	-5208249	-	L4_C_Mam	LINE	RTE-X	-2935	2203	1104	1
chr14	101869501	101869502	chunk0065_269_1	8.28044	AR_DHT_Control	chr14	101869044	101869654	-5174064	-	L1MD3	LINE	L1	-1939	6229	5571	1
chr14	101978693	101978694	chunk0065_273_1	8.79298	AR_DHT_Control	chr14	101978542	101978787	-5064931	-	L2a	LINE	L2	-3	3423	3108	1
chr14	102057135	102057136	chunk0065_274_1	7.86105	AR_DHT_Control	chr14	102057000	102057477	-4986241	+	(AC)n	Simple_repeat	Simple_repeat	1	479	0	1
chr14	102057531	102057532	chunk0065_275_1	5.16739	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	102057477	102057679	-4986039	+	L2a	LINE	L2	3218	3420	-6	1
chr14	102185528	102185529	chunk0065_277_1	14.292	AR_DHT_Control	chr14	102185485	102185680	-4858038	+	MIRc	SINE	MIR	13	251	-17	1
chr14	102481959	102481960	chunk0065_283_1	110.3008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	102481948	102482047	-4561671	-	HAL1	LINE	L1	-388	2119	2025	1
chr14	102525285	102525286	chunk0065_285_1	15.2678	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	102525253	102525597	-4518121	+	L1MB3	LINE	L1	5698	6042	-141	1
chr14	102531285	102531286	chunk0065_287_1	7.36432	AR_DHT_Control	chr14	102530975	102531370	-4512348	+	MER51B	LTR	ERV1	49	375	-2	1
chr14	102678996	102678997	chunk0065_291_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	102678591	102679474	-4364244	-	L1ME1	LINE	L1	-487	5692	4796	1
chr14	102691830	102691831	chunk0065_292_1	31.2612	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	102691812	102692097	-4351621	-	L1M5	LINE	L1	-398	5775	5437	1
chr14	103072173	103072174	chunk0065_317_1	5.81492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	103072158	103072243	-3971475	+	MER30	DNA	hAT-Charlie	1	90	-140	1
chr14	103142540	103142541	chunk0065_319_1	139.32956	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	103142414	103142857	-3900861	+	MER83	LTR	ERV1	3	448	0	1
chr14	103213864	103213865	chunk0065_325_1	49.345	AR_DHT_Control	chr14	103212930	103213965	-3829753	-	ERVL-E-int	LTR	ERVL	-935	4732	3668	1
chr14	103214688	103214689	chunk0065_326_1	5.9171	AR_DHT_Control	chr14	103214592	103214894	-3828824	+	MER90	LTR	ERV1	15	322	-253	1
chr14	103260206	103260207	chunk0065_332_1	99.7401	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	103260094	103260635	-3783083	+	LTR66	LTR	ERVL	1	608	-2	1
chr14	103525666	103525667	chunk0065_340_1	166.5912	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	103524915	103525904	-3517814	-	LTR5B	LTR	ERVK	0	1002	1	1
chr14	103620980	103620981	chunk0065_347_1	125.289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	103620928	103621203	-3422515	+	L1ME2z	LINE	L1	5642	5979	-465	1
chr14	103627233	103627234	chunk0065_349_1	18.44764	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	103627065	103627362	-3416356	+	L2a	LINE	L2	3072	3424	-2	1
chr14	103772309	103772310	chunk0065_356_1	66.8173	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	103771811	103772665	-3271053	-	L1ME1	LINE	L1	-2	6177	5325	1
chr14	103773533	103773534	chunk0065_357_1	8.84439	AR_DHT_Control	chr14	103773477	103773944	-3269774	+	HAL1	LINE	L1	52	538	-1969	1
chr14	103835117	103835118	chunk0065_361_1	38.50422	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	103835104	103835423	-3208295	-	AluJb	SINE	Alu	-11	301	2	1
chr14	103878655	103878656	chunk0065_362_1	8.22827	AR_DHT_Control	chr14	103878577	103879016	-3164702	+	MER41D	LTR	ERV1	1	451	-106	1
chr14	103911208	103911209	chunk0065_364_1	5.6425	AR_DHT_Control	chr14	103911086	103911254	-3132464	+	MIRc	SINE	MIR	54	227	-41	1
chr14	104009057	104009058	chunk0065_370_1	44.5444	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	104008963	104009243	-3034475	-	Tigger3b	DNA	TcMar-Tigger	0	1231	953	1
chr14	104054422	104054423	chunk0065_376_1	21.56589	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	104054376	104054505	-2989213	-	MER58A	DNA	hAT-Charlie	-44	180	38	1
chr14	104082939	104082940	chunk0065_377_1	21.1639	AR_DHT_Control	chr14	104082764	104083118	-2960600	+	L2a	LINE	L2	2962	3420	-6	1
chr14	104405987	104405988	chunk0065_382_1	42.71531	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	104405371	104407444	-2636274	+	L1ME3A	LINE	L1	50	3332	-4001	1
chr14	104638236	104638237	chunk0065_386_1	22.89764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	104637747	104638336	-2405382	+	L1M5	LINE	L1	3763	4367	-1779	1
chr14	104685126	104685127	chunk0065_389_1	18.50692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	104685054	104685141	-2358577	-	Tigger17c	DNA	TcMar-Tigger	-1101	87	1	1
chr14	105114757	105114758	chunk0065_398_1	13.5024	AR_DHT_Control	chr14	105114672	105114818	-1928900	-	MER50-int	LTR	ERV1	-6594	611	512	1
chr14	105317224	105317225	chunk0065_404_1	20.8388	AR_DHT_Control	chr14	105317100	105317665	-1726053	-	L1ME3E	LINE	L1	-343	5899	5266	1
chr14	105617465	105617466	chunk0065_410_1	21.53796	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr14	105617400	105618033	-1425685	+	(TCACA)n	Simple_repeat	Simple_repeat	1	643	0	1
chr14	105762034	105762035	chunk0065_414_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	105761839	105762222	-1281496	+	(CACAT)n	Simple_repeat	Simple_repeat	1	390	0	1
chr14	105823874	105823875	chunk0065_415_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	105823666	105824028	-1219690	-	MER101-int	LTR	ERV1	-3890	2749	2358	1
chr14	105826367	105826368	chunk0065_417_1	18.26922	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	105825316	105826832	-1216886	-	L1PB1	LINE	L1	-2	6865	5374	1
chr14	106052622	106052623	chunk0065_424_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106052326	106053406	-990312	-	HUERS-P1-int	LTR	ERV1	-37	6226	5130	1
chr14	106071437	106071438	chunk0065_426_1	19.55492	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106071054	106071463	-972255	+	L1MA9	LINE	L1	4596	5019	-1121	1
chr14	106135192	106135193	chunk0065_427_1	56.51944	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	106134672	106135481	-908237	-	LTR19C	LTR	ERV1	0	779	1	1
chr14	106191802	106191803	chunk0065_428_1	7.97917	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106191429	106192536	-851182	-	L1PB4	LINE	L1	-447	5709	4561	1
chr14	106332163	106332164	chunk0065_434_1	20.53606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106331880	106332166	-711552	+	L1M3	LINE	L1	2475	2766	-3374	1
chr14	106332163	106332164	chunk0065_434_1	20.53606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106332152	106332232	-711486	+	L1M3	LINE	L1	3549	3633	-2507	1
chr14	106426382	106426383	chunk0065_436_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106425562	106426755	-616963	-	L1P4	LINE	L1	-344	5812	4561	1
chr14	106539464	106539465	chunk0065_444_1	17.9357	SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106539393	106540357	-503361	+	LTR13_	LTR	ERVK	3	954	0	1
chr14	106543095	106543096	chunk0065_446_1	153.6068	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106542787	106543656	-500062	-	L1MA5	LINE	L1	-4	6296	5402	1
chr14	106549255	106549256	chunk0065_448_1	86.15825	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr14	106548995	106549401	-494317	+	L1MA9	LINE	L1	4596	5019	-1121	1
chr14	106553550	106553551	chunk0065_450_1	8.11113	AR_DHT_Control	chr14	106553436	106553952	-489766	-	L1P4	LINE	L1	-825	5321	4833	1
chr14	106563345	106563346	chunk0065_451_1	34.8239	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr14	106563075	106563465	-480253	-	L1ME1	LINE	L1	-101	6078	5702	1
chr14	106846380	106846381	chunk0065_457_1	275.485	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr14	106845982	106849095	-194623	-	L1PBb	LINE	L1	-3053	3862	713	1
chr15	17081692	17081693	chunk0065_2_1	28.88994	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	17080532	17081942	-84909247	+	(GGAAT)n	Simple_repeat	Simple_repeat	4	1415	0	1
chr15	17083302	17083303	chunk0065_3_1	4.5547	AR_DHT_Control	chr15	17082412	17083573	-84907616	+	(GGAAT)n	Simple_repeat	Simple_repeat	5	1165	0	1
chr15	19640406	19640407	chunk0065_4_1	9.20249	Merged_Lncap_AR_Veh	chr15	19500000	19725253	-82265936	+	ALR/Alpha	Satellite	centr	1	226784	0	1
chr15	20231675	20231676	chunk0065_7_1	4.89968	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	20231665	20231811	-81759378	+	(AC)n	Simple_repeat	Simple_repeat	1	151	0	1
chr15	20293792	20293793	chunk0065_14_1	18.4237	AR_DHT_Control	chr15	20293436	20293923	-81697266	+	Tigger3	DNA	TcMar-Tigger	2505	3026	-3	1
chr15	20340401	20340402	chunk0065_16_1	28.28542	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	20340241	20344102	-81647087	+	(AGCCAGCCA)n	Simple_repeat	Simple_repeat	1	4048	0	1
chr15	20341427	20341428	chunk0065_20_1	25.12363	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20340241	20344102	-81647087	+	(AGCCAGCCA)n	Simple_repeat	Simple_repeat	1	4048	0	1
chr15	20361196	20361197	chunk0065_21_1	4.22809	AR_DHT_Control	chr15	20361071	20361555	-81629634	+	L1MD2	LINE	L1	20	548	-5861	1
chr15	20386596	20386597	chunk0065_22_1	7.67158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	20386449	20386675	-81604514	+	MIR	SINE	MIR	12	262	0	1
chr15	20642495	20642496	chunk0065_26_1	8.80534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20641984	20642724	-81348465	-	MER49	LTR	ERV1	0	923	182	1
chr15	20644552	20644553	chunk0065_30_1	8.58088	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20644336	20645523	-81345666	+	L1MC3	LINE	L1	5594	6887	-1108	1
chr15	20659382	20659383	chunk0065_31_1	6.94032	AR_DHT_Control	chr15	20659339	20659649	-81331540	+	AluSx3	SINE	Alu	1	309	-2	1
chr15	20672897	20672898	chunk0065_34_1	144.23983	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20672798	20673019	-81318170	-	L2a	LINE	L2	-1	3425	3216	1
chr15	20732583	20732584	chunk0065_35_1	29.1927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	20731587	20735614	-81255575	-	L1MEc	LINE	L1	-1001	5318	1115	1
chr15	21261295	21261296	chunk0065_39_1	15.80904	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	21261145	21261313	-80729876	+	REP522	Satellite	telo	561	727	-1090	1
chr15	21285460	21285461	chunk0065_42_1	46.90735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	21285274	21285697	-80705492	-	LTR9	LTR	ERV1	-208	404	1	1
chr15	21301856	21301857	chunk0065_46_1	8.31418	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	21300635	21304660	-80686529	-	L1MD2	LINE	L1	-1001	5318	1121	1
chr15	22301552	22301553	chunk0065_49_1	15.7965	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	22301515	22301620	-79689569	+	L2c	LINE	L2	3283	3378	-9	1
chr15	22745945	22745946	chunk0065_51_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	22745536	22746274	-79244915	+	L1M7	LINE	L1	875	1655	-700	1
chr15	23034106	23034107	chunk0065_63_1	112.4396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	23033945	23034288	-78956901	+	MER77	LTR	ERVL	1	351	-253	1
chr15	23107466	23107467	chunk0065_66_1	14.8326	AR_DHT_Control	chr15	23107447	23107848	-78883341	-	L1MC4	LINE	L1	-44	7998	7590	1
chr15	23370080	23370081	chunk0065_67_1	12.1886	AR_DHT_Control	chr15	23369983	23370081	-78621108	-	L1ME3G	LINE	L1	-127	797	704	1
chr15	23471518	23471519	chunk0065_72_1	11.8254	AR_DHT_Control	chr15	23471209	23473309	-78517880	-	ERVL-B4-int	LTR	ERVL	-944	4770	2633	1
chr15	23530147	23530148	chunk0065_74_1	22.65497	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	23527274	23530482	-78460707	-	HERV35I-int	LTR	ERV1	-422	6496	2841	1
chr15	23546359	23546360	chunk0065_76_1	489.5526	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr15	23545544	23546553	-78444636	-	ERVL-B4-int	LTR	ERVL	-476	5238	4228	1
chr15	23599183	23599184	chunk0065_81_1	227.74	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	23598883	23599305	-78391884	-	MLT2B4	LTR	ERVL	-53	514	4	1
chr15	23658630	23658631	chunk0065_84_1	6.18182	AR_DHT_Control	chr15	23658540	23659044	-78332145	+	L1MA8	LINE	L1	4781	5283	-1008	1
chr15	23750982	23750983	chunk0065_88_1	37.4994	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	23750653	23751245	-78239944	+	MER4B-int	LTR	ERV1	3079	3669	-3089	1
chr15	23773388	23773389	chunk0065_89_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	23772693	23774219	-78216970	-	L1PA16	LINE	L1	-3	6163	4638	1
chr15	23774062	23774063	chunk0065_90_1	6.48643	AR_DHT_Control	chr15	23772693	23774219	-78216970	-	L1PA16	LINE	L1	-3	6163	4638	1
chr15	23882289	23882290	chunk0065_94_1	28.5668	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	23882172	23883196	-78107993	-	L1MC3	LINE	L1	-660	7125	6106	1
chr15	23961544	23961545	chunk0065_97_1	96.3628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	23961406	23961921	-78029268	-	L1MC3	LINE	L1	-25	7760	7205	1
chr15	23980703	23980704	chunk0065_99_1	17.35195	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	23980581	23981091	-78010098	-	MER54A	LTR	ERVL	-18	883	373	1
chr15	24051254	24051255	chunk0065_103_1	22.60554	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	24051203	24051424	-77939765	+	L1MEc	LINE	L1	92	318	-6082	1
chr15	24103361	24103362	chunk0065_105_1	18.2328	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	24102451	24103606	-77887583	-	L1MCa	LINE	L1	-3016	3305	2117	1
chr15	24368728	24368729	chunk0065_109_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	24367881	24369049	-77622140	-	L1MC3	LINE	L1	-3015	3306	2122	1
chr15	24621723	24621724	chunk0065_110_1	6.18182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	24621045	24622557	-77368632	-	L1PA13	LINE	L1	-4775	2010	156	1
chr15	24632424	24632425	chunk0065_112_1	36.2716	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	24632152	24633007	-77358182	-	ERVL-B4-int	LTR	ERVL	-3837	1877	1013	1
chr15	24647408	24647409	chunk0065_114_1	6.88185	AR_DHT_Control	chr15	24647361	24647460	-77343729	-	L1MC	LINE	L1	-3622	2524	2425	1
chr15	24879697	24879698	chunk0065_128_1	50.8156	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	24879675	24879854	-77111335	+	MER58A	DNA	hAT-Charlie	16	198	-26	1
chr15	24919816	24919817	chunk0065_129_1	64.20039	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	24919446	24919852	-77071337	-	MER31A	LTR	ERV1	-15	470	1	1
chr15	24942890	24942891	chunk0065_132_1	4.56426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	24942077	24943810	-77047379	-	ERVL-B4-int	LTR	ERVL	-784	4930	3147	1
chr15	24943253	24943254	chunk0065_133_1	12.6489	AR_DHT_Control	chr15	24942077	24943810	-77047379	-	ERVL-B4-int	LTR	ERVL	-784	4930	3147	1
chr15	25124143	25124144	chunk0065_137_1	42.1177	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	25123626	25125760	-76865429	-	L1MC4a	LINE	L1	-2	8053	5928	1
chr15	25142118	25142119	chunk0065_139_1	10.82205	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	25140287	25143435	-76847754	-	MER110-int	LTR	ERV1	-1317	3330	171	1
chr15	25346121	25346122	chunk0065_144_1	17.82158	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	25345979	25347018	-76644171	+	L1ME2	LINE	L1	536	1682	-4951	1
chr15	25386338	25386339	chunk0065_147_1	37.41129	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	25385566	25386636	-76604553	+	L1MC1	LINE	L1	12	1137	-5371	1
chr15	25418015	25418016	chunk0065_149_1	31.2332	AR_DHT_Control	chr15	25417956	25418238	-76572951	-	Tigger3a	DNA	TcMar-Tigger	-61	287	1	1
chr15	25426831	25426832	chunk0065_152_1	41.0094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	25426827	25427042	-76564147	-	AluJr	SINE	Alu	-17	295	44	1
chr15	25441391	25441392	chunk0065_154_1	18.46302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	25441300	25441428	-76549761	-	L2c	LINE	L2	-24	3363	3208	1
chr15	25513221	25513222	chunk0065_155_1	5.77762	AR_DHT_Control	chr15	25513183	25513722	-76477467	-	MLT1G1	LTR	ERVL-MaLR	-3	576	16	1
chr15	25518857	25518858	chunk0065_157_1	38.5095	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	25518045	25519131	-76472058	+	L1MD1	LINE	L1	4924	6041	-201	1
chr15	25560657	25560658	chunk0065_160_1	9.88994	AR_DHT_Control	chr15	25560612	25560678	-76430511	+	Charlie18a	DNA	hAT-Charlie	32	94	-248	1
chr15	25661083	25661084	chunk0065_162_1	24.0516	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	25660688	25661280	-76329909	+	L1M6B	LINE	L1	1025	1655	-852	1
chr15	25825499	25825500	chunk0065_167_1	7.29426	AR_DHT_Control	chr15	25825040	25826277	-76164912	+	L1M4	LINE	L1	266	1606	-5911	1
chr15	25829796	25829797	chunk0065_168_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	25829699	25830086	-76161103	-	L2	LINE	L2	-341	3078	2671	1
chr15	26096576	26096577	chunk0065_173_1	17.0206	AR_DHT_Control	chr15	26096502	26097080	-75894109	+	MER90	LTR	ERV1	1	575	0	1
chr15	26291682	26291683	chunk0065_179_1	7.52656	AR_DHT_Control	chr15	26291394	26291833	-75699356	+	L2c	LINE	L2	2910	3387	0	1
chr15	26473111	26473112	chunk0065_181_1	9.34168	AR_DHT_Control	chr15	26472995	26473412	-75517777	-	LTR23	LTR	ERV1	-5	432	1	1
chr15	26628302	26628303	chunk0065_185_1	189.7037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	26628288	26628586	-75362603	-	L2c	LINE	L2	0	3387	3079	1
chr15	26786117	26786118	chunk0066_2_1	23.77612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	26786047	26786388	-75204801	-	L1MEf	LINE	L1	-4867	1766	1407	1
chr15	26901313	26901314	chunk0066_6_1	17.21982	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	26900532	26902955	-75088234	-	L1MD3	LINE	L1	0	6333	3838	1
chr15	26902011	26902012	chunk0066_7_1	5.06979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	26900532	26902955	-75088234	-	L1MD3	LINE	L1	0	6333	3838	1
chr15	26918529	26918530	chunk0066_11_1	62.1802	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	26916308	26918879	-75072310	-	L1M3d	LINE	L1	-1228	5410	2715	1
chr15	27006633	27006634	chunk0066_12_1	21.379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	27006501	27006843	-74984346	-	L1PA15	LINE	L1	-7	6158	5814	1
chr15	27283071	27283072	chunk0066_17_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27280435	27283233	-74707956	-	L1MD2	LINE	L1	-3108	3429	626	1
chr15	27545724	27545725	chunk0066_27_1	35.40733	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	27545591	27545740	-74445449	+	ERV3-16A3_I-int	LTR	ERVL	4058	4198	-1028	1
chr15	27583925	27583926	chunk0066_29_1	22.0454	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	27583424	27584888	-74406301	+	L1M4	LINE	L1	4255	5761	-419	1
chr15	27608815	27608816	chunk0066_31_1	43.07269	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	27608668	27609198	-74381991	-	LTR12	LTR	ERV1	-234	592	1	1
chr15	27629634	27629635	chunk0066_32_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27629520	27630016	-74361173	+	MLT2F	LTR	ERVL	1	591	-72	1
chr15	27630968	27630969	chunk0066_34_1	41.0524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27630958	27631011	-74360178	+	L2a	LINE	L2	3369	3424	-2	1
chr15	27672800	27672801	chunk0066_36_1	5.19865	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	27672654	27672843	-74318346	+	(GCACAT)n	Simple_repeat	Simple_repeat	1	207	0	1
chr15	27737356	27737357	chunk0066_39_1	16.2797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	27736724	27738448	-74252741	+	L1ME3A	LINE	L1	3975	5935	-238	1
chr15	27768425	27768426	chunk0066_40_1	7.48058	AR_DHT_Control	chr15	27768269	27768711	-74222478	+	LTR23	LTR	ERV1	1	467	0	1
chr15	27909095	27909096	chunk0066_45_1	28.92625	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	27909068	27910675	-74080514	+	L1MC4a	LINE	L1	4372	6054	-1896	1
chr15	27924518	27924519	chunk0066_46_1	10.802	AR_DHT_Control	chr15	27924408	27924883	-74066306	+	L1M4a2	LINE	L1	2108	2598	-58	1
chr15	28103132	28103133	chunk0066_48_1	93.5121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	28103016	28103766	-73887423	+	L1MC1	LINE	L1	5509	6285	-48	1
chr15	28225858	28225859	chunk0066_54_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	28225726	28226097	-73765092	+	L1MB5	LINE	L1	3265	3660	-2486	1
chr15	28661856	28661857	chunk0066_58_1	11.1716	AR_DHT_Control	chr15	28661821	28661995	-73329194	+	MER58A	DNA	hAT-Charlie	44	224	0	1
chr15	28820265	28820266	chunk0066_61_1	48.0369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	28819986	28820604	-73170585	+	L1M7	LINE	L1	850	1527	-4691	1
chr15	28892641	28892642	chunk0066_62_1	9.01503	AR_DHT_Control	chr15	28892631	28892690	-73098499	+	(TG)n	Simple_repeat	Simple_repeat	2	60	0	1
chr15	28973201	28973202	chunk0066_65_1	20.45696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	28972698	28973523	-73017666	+	MER97a	DNA	hAT-Tip100	2	849	-41	1
chr15	29012487	29012488	chunk0066_66_1	7.72091	AR_DHT_Control	chr15	29011978	29012701	-72978488	-	L1MC3	LINE	L1	-12	7773	6918	1
chr15	29167331	29167332	chunk0066_68_1	23.3275	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	29161799	29168334	-72822855	+	L1PB1	LINE	L1	253	6866	-1	1
chr15	29208148	29208149	chunk0066_70_1	5.24411	AR_DHT_Control	chr15	29208094	29208272	-72782917	-	MER117	DNA	hAT-Charlie	0	197	1	1
chr15	29343151	29343152	chunk0066_74_1	15.91971	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	29342998	29343177	-72648012	+	L1ME4b	LINE	L1	544	722	-170	1
chr15	29401895	29401896	chunk0066_78_1	35.81831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	29401288	29401977	-72589212	+	L1ME4b	LINE	L1	5	761	-131	1
chr15	29438424	29438425	chunk0066_79_1	9.34711	AR_DHT_Control	chr15	29438301	29438521	-72552668	+	MER101B	LTR	ERV1	1	217	-353	1
chr15	29671143	29671144	chunk0066_83_1	13.9477	AR_DHT_Control	chr15	29670793	29671598	-72319591	+	MER21C	LTR	ERVL	1	922	-16	1
chr15	29777092	29777093	chunk0066_93_1	126.79703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	29776382	29777446	-72213743	-	Charlie1a	DNA	hAT-Charlie	-349	1106	7	1
chr15	29784658	29784659	chunk0066_95_1	65.5857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	29784599	29784954	-72206235	+	HAL1M8	LINE	L1	1537	1916	-1075	1
chr15	29812307	29812308	chunk0066_97_1	27.9242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	29812248	29812357	-72178832	+	L1ME3B	LINE	L1	6130	6242	0	1
chr15	29829190	29829191	chunk0066_100_1	12.7844	AR_DHT_Control	chr15	29829104	29829256	-72161933	-	L1MD3	LINE	L1	-15	7980	7814	1
chr15	29854491	29854492	chunk0066_104_1	7.34658	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	29854255	29854701	-72136488	+	MLT1C	LTR	ERVL-MaLR	1	458	-9	1
chr15	29886998	29886999	chunk0066_108_1	13.1999	AR_DHT_Control	chr15	29886712	29887080	-72104109	+	L1M5	LINE	L1	4412	4843	-1303	1
chr15	29887928	29887929	chunk0066_109_1	7.83042	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	29887839	29888184	-72103005	+	L1ME4c	LINE	L1	281	671	-159	1
chr15	29923322	29923323	chunk0066_110_1	8.81034	AR_DHT_Control	chr15	29922919	29923327	-72067862	+	L1M5	LINE	L1	5345	5823	-301	1
chr15	29930165	29930166	chunk0066_111_1	8.35541	AR_DHT_Control	chr15	29929728	29930932	-72060257	+	L1MEg	LINE	L1	3067	4377	-1769	1
chr15	30173163	30173164	chunk0066_115_1	13.59767	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	30172482	30173339	-71817850	+	(GT)n	Simple_repeat	Simple_repeat	1	906	0	1
chr15	30740985	30740986	chunk0066_117_1	7.97917	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	30735634	30742017	-71249172	+	L1PB1	LINE	L1	293	8203	-1817	1
chr15	30869683	30869684	chunk0066_118_1	32.98032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	30869424	30871437	-71119752	+	ERVL-B4-int	LTR	ERVL	2322	4406	-1308	1
chr15	31008085	31008086	chunk0066_122_1	5.36932	AR_DHT_Control	chr15	31007696	31008699	-70982490	-	L1MEf	LINE	L1	-1512	5032	4018	1
chr15	31100859	31100860	chunk0066_131_1	24.5901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	31100762	31100890	-70890299	-	L1ME3Cz	LINE	L1	-433	564	443	1
chr15	31125293	31125294	chunk0066_132_1	51.5243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	31125207	31125428	-70865761	+	L1MC2	LINE	L1	6279	6504	-15	1
chr15	31254639	31254640	chunk0066_135_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	31254345	31254742	-70736447	+	MLT1F1	LTR	ERVL-MaLR	110	567	-2	1
chr15	31405694	31405695	chunk0066_147_1	7.74912	AR_DHT_Control	chr15	31405655	31406197	-70584992	+	HAL1ME	LINE	L1	710	1275	-1190	1
chr15	32042814	32042815	chunk0066_156_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	32041601	32042854	-69948335	-	L1MC1	LINE	L1	-5246	1262	5	1
chr15	32092173	32092174	chunk0066_158_1	28.98283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	32092058	32092454	-69898735	-	HAL1b	LINE	L1	-1251	1170	763	1
chr15	32109403	32109404	chunk0066_159_1	4.24079	AR_DHT_Control	chr15	32108996	32109532	-69881657	-	MER41A	LTR	ERV1	-1	553	1	1
chr15	32256636	32256637	chunk0066_160_1	18.2328	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	32256157	32256894	-69734295	-	L1MC5a	LINE	L1	-189	2588	1856	1
chr15	32700615	32700616	chunk0066_166_1	15.8249	AR_DHT_Control	chr15	32700433	32700801	-69290388	-	MER57B2	LTR	ERV1	0	403	1	1
chr15	32971061	32971062	chunk0066_174_1	8.01864	AR_DHT_Control	chr15	32970992	32971229	-69019960	+	MIRb	SINE	MIR	16	253	-15	1
chr15	33022862	33022863	chunk0066_175_1	7.37742	AR_DHT_Control	chr15	33022636	33022902	-68968287	+	L1MEi	LINE	L1	157	381	-1831	1
chr15	33109975	33109976	chunk0066_180_1	24.2364	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	33109947	33110011	-68881178	+	L2b	LINE	L2	3311	3375	0	1
chr15	33174011	33174012	chunk0066_191_1	48.1404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	33173957	33174084	-68817105	+	LTR88a	LTR	Gypsy?	662	787	-29	1
chr15	33218396	33218397	chunk0066_193_1	7.60463	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	33218211	33218733	-68772456	+	L1PB3	LINE	L1	2577	3093	-3756	1
chr15	33598153	33598154	chunk0066_204_1	25.25114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	33598124	33598441	-68392748	-	MER4-int	LTR	ERV1	-5314	1284	1005	1
chr15	33754373	33754374	chunk0066_206_1	7.92341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	33754199	33754594	-68236595	+	L2a	LINE	L2	2729	3180	-246	1
chr15	33761045	33761046	chunk0066_207_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	33757851	33763610	-68227579	+	L1PA7	LINE	L1	11	5798	-671	1
chr15	33822327	33822328	chunk0066_208_1	5.82105	AR_DHT_Control	chr15	33822319	33822407	-68168782	-	Tigger12A	DNA	TcMar-Tigger	-4	815	728	1
chr15	33888245	33888246	chunk0066_211_1	26.2941	AR_DHT_Control	chr15	33888145	33888571	-68102618	-	L2c	LINE	L2	-2	3385	2932	1
chr15	33903919	33903920	chunk0066_215_1	13.0599	AR_DHT_Control	chr15	33903770	33904107	-68087082	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr15	33985331	33985332	chunk0066_221_1	147.6053	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	33985138	33985584	-68005605	-	LTR40c	LTR	ERVL	-5	460	44	1
chr15	34189670	34189671	chunk0066_231_1	30.9115	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34189323	34189827	-67801362	-	LOR1-int	LTR	ERV1	-3322	4798	4289	1
chr15	34216647	34216648	chunk0066_234_1	98.0158	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	34216405	34216649	-67774540	+	L1ME3G	LINE	L1	426	675	-217	1
chr15	34262920	34262921	chunk0066_236_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	34262069	34263014	-67728175	+	LTR28C	LTR	ERV1	54	1128	-1	1
chr15	34447906	34447907	chunk0066_240_1	6.6363	AR_DHT_Control	chr15	34447566	34448073	-67543116	+	L1MC4	LINE	L1	6635	7102	-940	1
chr15	34462017	34462018	chunk0066_243_1	92.09787	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34460255	34462127	-67529062	+	L1MC3	LINE	L1	3992	5888	-1897	1
chr15	34664286	34664287	chunk0066_249_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34663915	34664779	-67326410	+	L1ME1	LINE	L1	5287	6150	-29	1
chr15	34684495	34684496	chunk0066_251_1	45.08	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34684426	34684527	-67306662	-	MER63B	DNA	hAT-Blackjack	-327	109	6	1
chr15	34703852	34703853	chunk0066_252_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34703842	34703939	-67287250	-	MIR3	SINE	MIR	-69	139	29	1
chr15	34805162	34805163	chunk0066_256_1	24.32394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34805138	34805189	-67186000	-	L2a	LINE	L2	-5	3370	3320	1
chr15	34829357	34829358	chunk0066_259_1	17.7222	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34829215	34829433	-67161756	+	L1MEd	LINE	L1	29	249	-6837	1
chr15	34850952	34850953	chunk0066_262_1	8.62581	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34850887	34850973	-67140216	+	MIR3	SINE	MIR	52	152	-56	1
chr15	34912096	34912097	chunk0066_265_1	7.98358	AR_DHT_Control	chr15	34910675	34912262	-67078927	-	L1MA9	LINE	L1	-3	6545	4893	1
chr15	34956017	34956018	chunk0066_269_1	47.2401	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	34955926	34956184	-67035005	+	L1ME3A	LINE	L1	5882	6160	-13	1
chr15	35134438	35134439	chunk0066_280_1	47.00793	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	35134340	35134633	-66856556	-	L2c	LINE	L2	-16	3371	3035	1
chr15	35278699	35278700	chunk0066_283_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	35277481	35278767	-66712422	+	MSTB-int	LTR	ERVL-MaLR	1	1326	-325	1
chr15	35325677	35325678	chunk0066_287_1	76.4611	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	35325145	35326160	-66665029	+	L1M5	LINE	L1	4558	5611	-512	1
chr15	35370659	35370660	chunk0066_288_1	47.17015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	35369712	35371537	-66619652	+	L1MC1	LINE	L1	4463	6328	-5	1
chr15	35412426	35412427	chunk0066_290_1	32.608	AR_DHT_Control	chr15	35411744	35413157	-66578032	+	L1MC1	LINE	L1	4872	6322	-11	1
chr15	35443516	35443517	chunk0066_293_1	14.1764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	35443247	35443701	-66547488	+	LTR68	LTR	ERV1	9	466	-274	1
chr15	35557221	35557222	chunk0066_299_1	18.8273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	35556834	35557277	-66433912	-	LTR33	LTR	ERVL	-63	452	1	1
chr15	36230451	36230452	chunk0066_321_1	31.8357	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	36230428	36230985	-65760204	-	L2c	LINE	L2	0	3387	2794	1
chr15	36582286	36582287	chunk0066_328_1	5.20246	AR_DHT_Control	chr15	36581820	36582694	-65408495	-	Charlie1a	DNA	hAT-Charlie	-547	908	2	1
chr15	36612431	36612432	chunk0066_330_1	26.76	AR_DHT_Control	chr15	36612024	36612478	-65378711	+	MLT1J	LTR	ERVL-MaLR	3	506	-6	1
chr15	37292149	37292150	chunk0066_342_1	6.48643	AR_DHT_Control	chr15	37292066	37293310	-64697879	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	2	1
chr15	37834944	37834945	chunk0066_344_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	37834934	37835099	-64156090	+	MIRb	SINE	MIR	71	242	-26	1
chr15	37896429	37896430	chunk0066_345_1	17.75766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	37896096	37896480	-64094709	+	L2c	LINE	L2	2983	3374	-13	1
chr15	37926191	37926192	chunk0066_346_1	5.6425	AR_DHT_Control	chr15	37924870	37926464	-64064725	+	L1M3b	LINE	L1	2841	4460	-3102	1
chr15	37944229	37944230	chunk0066_348_1	16.16227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	37944225	37944385	-64046804	-	MamTip3	DNA	hAT-Tip100	-175	325	141	1
chr15	37969747	37969748	chunk0066_349_1	71.5558	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	37969559	37970134	-64021055	-	L1PA15	LINE	L1	-13	8147	7545	1
chr15	38187886	38187887	chunk0066_350_1	130.141	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	38187459	38188089	-63803100	-	L2c	LINE	L2	-3	3384	2706	1
chr15	38243409	38243410	chunk0066_356_1	12.0293	AR_DHT_Control	chr15	38243249	38243561	-63747628	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	1
chr15	38265202	38265203	chunk0066_358_1	71.0435	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	38265142	38265255	-63725934	+	MIR	SINE	MIR	57	171	-91	1
chr15	38295314	38295315	chunk0066_360_1	7.74912	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	38295134	38295545	-63695644	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr15	38369161	38369162	chunk0066_362_1	85.523	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	38369090	38369599	-63621590	+	L1MEc	LINE	L1	1633	2160	-4240	1
chr15	38369985	38369986	chunk0066_363_1	19.19355	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	38369891	38370038	-63621151	+	L2b	LINE	L2	3234	3375	0	1
chr15	38430424	38430425	chunk0066_367_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	38430126	38430684	-63560505	-	MLT1G	LTR	ERVL-MaLR	-1	590	1	1
chr15	38440497	38440498	chunk0066_368_1	5.59431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	38439797	38440687	-63550502	-	L1PB4	LINE	L1	-4712	2141	1268	1
chr15	38467901	38467902	chunk0066_370_1	20.78751	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	38467272	38468031	-63523158	+	L1ME4b	LINE	L1	11	780	-112	1
chr15	38541116	38541117	chunk0066_373_1	12.7341	AR_DHT_Control	chr15	38541104	38541231	-63449958	-	MIRc	SINE	MIR	-9	259	128	1
chr15	38702871	38702872	chunk0066_374_1	5.41601	AR_DHT_Control	chr15	38702426	38702880	-63288309	+	LTR22A	LTR	ERVK	1	458	0	1
chr15	39041122	39041123	chunk0066_391_1	69.44079	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	39041098	39041177	-62950012	+	Tigger5b	DNA	TcMar-Tigger	1	80	-392	1
chr15	39045554	39045555	chunk0066_393_1	7.11634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	39045129	39046365	-62944824	+	L1PB1	LINE	L1	4486	5788	-363	1
chr15	39361179	39361180	chunk0066_407_1	56.1889	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	39360503	39361182	-62630007	+	L1MC4	LINE	L1	7206	7898	-144	1
chr15	39419505	39419506	chunk0066_411_1	58.7241	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	39418493	39419671	-62571518	-	L1PB1	LINE	L1	0	6151	4961	1
chr15	39554375	39554376	chunk0066_419_1	6.10159	AR_DHT_Control	chr15	39554290	39554858	-62436331	+	CR1-16_AMi	LINE	CR1	195	729	-122	1
chr15	39652730	39652731	chunk0066_432_1	5.6425	AR_DHT_Control	chr15	39652704	39652893	-62338296	-	Tigger3b	DNA	TcMar-Tigger	-89	1142	945	1
chr15	39693975	39693976	chunk0066_434_1	31.70422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	39693911	39694083	-62297106	+	L1MA7	LINE	L1	6124	6291	0	1
chr15	39784783	39784784	chunk0066_439_1	17.05258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	39784004	39784784	-62206405	-	MER99	DNA	hAT?	0	831	2	1
chr15	39795104	39795105	chunk0066_440_1	9.17597	AR_DHT_Control	chr15	39795040	39795203	-62195986	-	MLT1K	LTR	ERVL-MaLR	-43	552	370	1
chr15	39888178	39888179	chunk0067_1_1	18.22201	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	39887803	39888273	-62102916	+	MER34A1	LTR	ERV1	1	506	-81	1
chr15	39975085	39975086	chunk0067_8_1	7.15668	AR_DHT_Control	chr15	39975081	39975312	-62015877	-	MIRb	SINE	MIR	-4	264	20	1
chr15	39988529	39988530	chunk0067_11_1	17.45385	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	39988334	39988652	-62002537	+	MER58B	DNA	hAT-Charlie	1	341	0	1
chr15	40397799	40397800	chunk0067_31_1	56.0323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	40397757	40397829	-61593360	-	L1M5	LINE	L1	-254	5908	5828	1
chr15	40460984	40460985	chunk0067_35_1	8.26412	AR_DHT_Control	chr15	40460960	40461019	-61530170	-	MIR	SINE	MIR	0	268	198	1
chr15	40830730	40830731	chunk0067_49_1	4.73472	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	40830724	40830912	-61160277	+	MIRb	SINE	MIR	18	238	-30	1
chr15	40831817	40831818	chunk0067_50_1	40.7449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	40831771	40832467	-61158722	-	L2b	LINE	L2	-69	3306	2600	1
chr15	40958268	40958269	chunk0067_61_1	74.84336	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	40957968	40958296	-61032893	-	L2b	LINE	L2	-3	3384	3024	1
chr15	41206557	41206558	chunk0067_65_1	7.36432	AR_DHT_Control	chr15	41206549	41206599	-60784590	+	MIRc	SINE	MIR	204	253	-15	1
chr15	41337730	41337731	chunk0067_73_1	6.3126	AR_DHT_Control	chr15	41337303	41337909	-60653280	+	L2a	LINE	L2	1567	2299	-1120	1
chr15	41404986	41404987	chunk0067_76_1	66.8276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	41404719	41405008	-60586181	-	AluSx	SINE	Alu	-18	294	2	1
chr15	41666497	41666498	chunk0067_81_1	29.65421	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	41666450	41666600	-60324589	+	L1PA17	LINE	L1	6015	6164	-2	1
chr15	41771960	41771961	chunk0067_83_1	29.2618	AR_DHT_Control	chr15	41771861	41772162	-60219027	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	1
chr15	41922885	41922886	chunk0067_88_1	6.7231	AR_DHT_Control	chr15	41922457	41923008	-60068181	+	Kanga1c	DNA	TcMar-Tc2	56	591	-138	1
chr15	42046733	42046734	chunk0067_94_1	12.16069	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	42045593	42046757	-59944432	+	L2b	LINE	L2	2115	3374	-1	1
chr15	42152534	42152535	chunk0067_97_1	28.9802	AR_DHT_Control	chr15	42152503	42152593	-59838596	-	L3	LINE	CR1	-112	3987	3899	1
chr15	42286630	42286631	chunk0067_104_1	90.3515	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	42286623	42286663	-59704526	+	(CACTGTT)n	Simple_repeat	Simple_repeat	1	43	0	1
chr15	42529205	42529206	chunk0067_118_1	33.78239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	42529059	42529257	-59461932	-	MER58A	DNA	hAT-Charlie	-19	205	2	1
chr15	42707233	42707234	chunk0067_122_1	41.9974	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	42707139	42707238	-59283951	+	L1M5	LINE	L1	5424	5526	-668	1
chr15	42764820	42764821	chunk0067_123_1	10.1791	AR_DHT_Control	chr15	42764132	42770256	-59220933	+	L1PA6	LINE	L1	1	6152	-2	1
chr15	42787175	42787176	chunk0067_124_1	87.89942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	42787087	42787288	-59203901	+	MER58A	DNA	hAT-Charlie	9	224	0	1
chr15	42822049	42822050	chunk0067_126_1	10.6105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	42821989	42822276	-59168913	-	L1ME1	LINE	L1	-742	5437	5149	1
chr15	42864165	42864166	chunk0067_127_1	15.47975	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	42862905	42864275	-59126914	+	L1P4	LINE	L1	4000	5335	-811	1
chr15	42865947	42865948	chunk0067_129_1	31.3448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	42865849	42866157	-59125032	+	L1MD3	LINE	L1	2255	2572	-3749	1
chr15	42901885	42901886	chunk0067_131_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	42901630	42901933	-59089256	+	L1M4	LINE	L1	5168	5441	-737	1
chr15	42931863	42931864	chunk0067_134_1	24.31102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	42931757	42931908	-59059281	-	MLT1D	LTR	ERVL-MaLR	-345	160	20	1
chr15	43127923	43127924	chunk0067_142_1	40.224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	43127882	43128033	-58863156	-	Helitron3Na_Mam	RC	Helitron	-1	485	318	1
chr15	43248617	43248618	chunk0067_147_1	42.4983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	43248547	43248651	-58742538	-	MIR	SINE	MIR	-1	261	146	1
chr15	43294558	43294559	chunk0067_149_1	11.9502	AR_DHT_Control	chr15	43294338	43294575	-58696614	+	MIRb	SINE	MIR	12	262	-6	1
chr15	43976154	43976155	chunk0067_158_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	43975590	43976507	-58014682	+	L1M4	LINE	L1	4456	5366	-780	1
chr15	44221749	44221750	chunk0067_175_1	10.3257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	44221738	44221848	-57769341	-	MIR	SINE	MIR	-15	253	119	1
chr15	44385447	44385448	chunk0067_180_1	5.6425	AR_DHT_Control	chr15	44385369	44385559	-57605630	-	L1MB5	LINE	L1	-668	5506	5332	1
chr15	44580303	44580304	chunk0067_186_1	62.43665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	44579771	44580401	-57410788	+	Tigger3c	DNA	TcMar-Tigger	1	602	0	1
chr15	44712301	44712302	chunk0067_189_1	48.16104	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	44712292	44712500	-57278689	-	MIR	SINE	MIR	-1	261	46	1
chr15	44868967	44868968	chunk0067_198_1	168.5521	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	44868161	44870289	-57120900	+	L1PA6	LINE	L1	2056	4176	-1978	1
chr15	44893558	44893559	chunk0067_199_1	73.9473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	44890546	44896672	-57094517	-	L1PA6	LINE	L1	-1	6153	5	1
chr15	44990612	44990613	chunk0067_207_1	19.04988	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	44990612	44990735	-57000454	-	AluJb	SINE	Alu	-187	125	3	1
chr15	44993156	44993157	chunk0067_208_1	22.068	AR_DHT_Control	chr15	44991143	44995956	-56995233	+	L1PA6	LINE	L1	1036	5571	-583	1
chr15	45024859	45024860	chunk0067_209_1	7.86105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	45024707	45024888	-56966301	-	L2c	LINE	L2	-5	3382	3174	1
chr15	45139889	45139890	chunk0067_216_1	300.5191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	45139811	45139900	-56851289	-	MIRb	SINE	MIR	-8	260	159	1
chr15	45345175	45345176	chunk0067_222_1	27.9859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	45345098	45345266	-56645923	+	MLT2C2	LTR	ERVL	265	403	-61	1
chr15	45468033	45468034	chunk0067_235_1	5.73469	AR_DHT_Control	chr15	45467952	45468073	-56523116	-	L2b	LINE	L2	-2	3373	3250	1
chr15	45500375	45500376	chunk0067_239_1	50.3147	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	45500241	45500411	-56490778	-	MIRb	SINE	MIR	-8	260	88	1
chr15	45518150	45518151	chunk0067_243_1	4.86684	AR_DHT_Control	chr15	45517977	45518457	-56472732	+	L2a	LINE	L2	2854	3402	-24	1
chr15	45552181	45552182	chunk0067_246_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	45552051	45552268	-56438921	+	MIRc	SINE	MIR	52	265	-3	1
chr15	45750585	45750586	chunk0067_256_1	4.83532	AR_DHT_Control	chr15	45750577	45751649	-56239540	-	L1ME3A	LINE	L1	-41	6132	5074	1
chr15	45755849	45755850	chunk0067_257_1	22.7661	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	45752524	45756731	-56234458	-	L1PA6	LINE	L1	-11	6143	1940	1
chr15	45812036	45812037	chunk0067_261_1	209.4798	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	45811767	45812068	-56179121	+	L1M1	LINE	L1	1756	2086	-5479	1
chr15	46060433	46060434	chunk0067_269_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	46058960	46060797	-55930392	+	LTR53-int	LTR	ERVL	1099	2974	-355	1
chr15	46654988	46654989	chunk0067_270_1	15.4338	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	46654951	46655456	-55335733	+	L1ME2	LINE	L1	5560	6110	-54	1
chr15	46676772	46676773	chunk0067_271_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	46676541	46676869	-55314320	-	LTR16A	LTR	ERVL	-112	344	1	1
chr15	46728959	46728960	chunk0067_273_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	46726900	46730042	-55261147	-	L1M3b	LINE	L1	-3690	3872	1219	1
chr15	46993671	46993672	chunk0067_275_1	7.36432	AR_DHT_Control	chr15	46990781	46997253	-54993936	-	L1PA8A	LINE	L1	0	6446	1	1
chr15	47177242	47177243	chunk0067_277_1	53.0037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	47177100	47177565	-54813624	+	MLT1H2	LTR	ERVL-MaLR	15	489	0	1
chr15	47466469	47466470	chunk0067_293_1	63.9905	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	47466005	47466727	-54524462	-	L1MA9	LINE	L1	0	6312	5599	1
chr15	47487062	47487063	chunk0067_294_1	9.46036	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	47486944	47487084	-54504105	-	L2b	LINE	L2	-9	3417	3242	1
chr15	47858027	47858028	chunk0067_310_1	28.80934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	47857925	47858101	-54133088	-	MIRb	SINE	MIR	-76	192	16	1
chr15	47944855	47944856	chunk0067_317_1	51.331	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	47944299	47945325	-54045864	+	L1ME3D	LINE	L1	4927	6015	-108	1
chr15	48003089	48003090	chunk0067_319_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	48003009	48003132	-53988057	+	L2c	LINE	L2	3259	3418	-8	1
chr15	48308506	48308507	chunk0067_331_1	9.08241	AR_DHT_Control	chr15	48308360	48308578	-53682611	+	MIRb	SINE	MIR	4	234	-34	1
chr15	48365075	48365076	chunk0067_334_1	27.8143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	48364175	48365315	-53625874	-	HAL1	LINE	L1	-1313	1194	4	1
chr15	48415350	48415351	chunk0067_338_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	48415308	48415426	-53575763	+	Tigger19b	DNA	TcMar-Tigger	356	484	-66	1
chr15	48463664	48463665	chunk0067_340_1	84.63768	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	48463608	48463682	-53527507	+	Tigger19b	DNA	TcMar-Tigger	431	505	-45	1
chr15	48610450	48610451	chunk0067_360_1	5.08049	AR_DHT_Control	chr15	48610396	48610475	-53380714	-	L2c	LINE	L2	-5	3382	3303	1
chr15	48637760	48637761	chunk0067_362_1	52.4311	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	48637691	48637801	-53353388	-	L2c	LINE	L2	-10	3377	3277	1
chr15	48908595	48908596	chunk0067_372_1	4.92181	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	48908056	48914023	-53077166	-	L1PB1	LINE	L1	-502	6365	354	1
chr15	48935973	48935974	chunk0067_373_1	12.5575	AR_DHT_Control	chr15	48935953	48936153	-53055036	+	L2c	LINE	L2	3180	3426	0	1
chr15	48959442	48959443	chunk0067_376_1	13.7182	AR_DHT_Control	chr15	48959214	48959477	-53031712	+	L2a	LINE	L2	3181	3426	0	1
chr15	48994471	48994472	chunk0067_377_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	48994399	48994686	-52996503	+	L2c	LINE	L2	2853	3163	-224	1
chr15	49071220	49071221	chunk0067_382_1	9.45295	AR_DHT_Control	chr15	49068556	49073687	-52917502	+	L1PA7	LINE	L1	5	5043	-1103	1
chr15	49075887	49075888	chunk0067_383_1	83.5083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	49075734	49076049	-52915140	+	MamGypsy2-I	LTR	Gypsy	2291	2632	-1534	1
chr15	49093631	49093632	chunk0067_386_1	6.30505	AR_DHT_Control	chr15	49093620	49093655	-52897534	+	(ATTTTG)n	Simple_repeat	Simple_repeat	1	36	0	1
chr15	49110563	49110564	chunk0067_390_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	49110028	49114203	-52876986	+	L1MA4A	LINE	L1	719	5024	-2541	1
chr15	49112693	49112694	chunk0067_391_1	6.83133	AR_DHT_Control	chr15	49110028	49114203	-52876986	+	L1MA4A	LINE	L1	719	5024	-2541	1
chr15	49183929	49183930	chunk0067_398_1	71.452	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	49183863	49184975	-52806214	-	L1MA3	LINE	L1	-3397	4168	3032	1
chr15	49406966	49406967	chunk0067_403_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	49402266	49407536	-52583653	-	L1PA13	LINE	L1	-1466	5300	1	1
chr15	49627614	49627615	chunk0067_414_1	8.27376	AR_DHT_Control	chr15	49627458	49628541	-52362648	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	85	1
chr15	49646080	49646081	chunk0067_415_1	8.21408	AR_DHT_Control	chr15	49646044	49646252	-52344937	+	MLT1H	LTR	ERVL-MaLR	240	407	-142	1
chr15	49691405	49691406	chunk0067_418_1	28.291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	49691360	49692028	-52299161	-	L2a	LINE	L2	-720	2699	2030	1
chr15	49886387	49886388	chunk0067_425_1	4.77556	AR_DHT_Control	chr15	49886234	49886392	-52104797	+	MIRb	SINE	MIR	86	267	-1	1
chr15	49946874	49946875	chunk0067_431_1	25.5948	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	49946310	49947117	-52044072	+	MER54B	LTR	ERVL	1	792	-1	1
chr15	50006368	50006369	chunk0067_439_1	43.9764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	50006337	50006396	-51984793	+	(ATAG)n	Simple_repeat	Simple_repeat	1	62	0	1
chr15	50163752	50163753	chunk0067_442_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	50162805	50165040	-51826149	-	L1M1	LINE	L1	-5101	2464	182	1
chr15	50164686	50164687	chunk0067_443_1	38.227	AR_DHT_Control	chr15	50162805	50165040	-51826149	-	L1M1	LINE	L1	-5101	2464	182	1
chr15	50195599	50195600	chunk0067_444_1	7.5528	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	50195518	50195653	-51795536	+	HAL1ME	LINE	L1	2386	2504	-3	1
chr15	50216042	50216043	chunk0067_445_1	21.3176	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	50212104	50216605	-51774584	+	L1PB1	LINE	L1	1929	6506	-361	1
chr15	50245238	50245239	chunk0067_450_1	198.876	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	50245173	50245373	-51745816	+	MER58A	DNA	hAT-Charlie	1	223	-1	1
chr15	50300103	50300104	chunk0067_455_1	24.47913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	50299809	50300106	-51691083	-	AluJb	SINE	Alu	-8	304	1	1
chr15	50382188	50382189	chunk0067_459_1	90.205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	50382102	50382209	-51608980	-	L1M5	LINE	L1	-1543	4603	4498	1
chr15	50471055	50471056	chunk0067_463_1	7.53305	AR_DHT_Control	chr15	50470987	50471207	-51519982	+	MIR	SINE	MIR	2	256	-6	1
chr15	50501985	50501986	chunk0068_2_1	165.9835	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	50501751	50502077	-51489112	+	MER58B	DNA	hAT-Charlie	2	341	0	1
chr15	50524005	50524006	chunk0068_4_1	121.84088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	50523471	50524727	-51466462	+	L1MA7	LINE	L1	4326	5608	-683	1
chr15	50571807	50571808	chunk0068_11_1	28.3065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	50571795	50572024	-51419165	+	Tigger1	DNA	TcMar-Tigger	1836	2083	-335	1
chr15	50671891	50671892	chunk0068_15_1	337.8749	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	50671815	50672056	-51319133	+	Tigger3b	DNA	TcMar-Tigger	98	320	-911	1
chr15	50835193	50835194	chunk0068_22_1	23.5545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	50834571	50835245	-51155944	-	L1MC5a	LINE	L1	-498	2279	1640	1
chr15	50858985	50858986	chunk0068_25_1	33.17151	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	50858801	50859128	-51132061	+	L2a	LINE	L2	1021	1372	-2047	1
chr15	51030635	51030636	chunk0068_33_1	5.6425	AR_DHT_Control	chr15	51028779	51031605	-50959584	-	L1M1	LINE	L1	-4544	3021	173	1
chr15	51060245	51060246	chunk0068_34_1	25.386	AR_DHT_Control	chr15	51060158	51060468	-50930721	+	MARNA	DNA	TcMar-Mariner	255	572	-14	1
chr15	51307956	51307957	chunk0068_40_1	12.0852	AR_DHT_Control	chr15	51307951	51308002	-50683187	+	MIRb	SINE	MIR	199	252	-16	1
chr15	51425001	51425002	chunk0068_43_1	69.42003	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	51423246	51425731	-50565458	-	MER4-int	LTR	ERV1	-686	5912	2046	1
chr15	51494593	51494594	chunk0068_49_1	111.3215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	51494566	51494766	-50496423	+	Charlie16a	DNA	hAT-Charlie	61	270	-72	1
chr15	51676213	51676214	chunk0068_52_1	3.93843	AR_DHT_Control	chr15	51676184	51676373	-50314816	-	L2c	LINE	L2	-5	3382	3185	1
chr15	51679083	51679084	chunk0068_53_1	12.6839	AR_DHT_Control	chr15	51679049	51679220	-50311969	+	Charlie14a	DNA	hAT-Charlie	232	399	-767	1
chr15	51796831	51796832	chunk0068_60_1	6.94497	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	51796509	51797143	-50194046	-	MER44D	DNA	TcMar-Tigger	-1	704	32	1
chr15	51816609	51816610	chunk0068_64_1	12.78629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	51816575	51816935	-50174254	-	Tigger19b	DNA	TcMar-Tigger	-25	525	154	1
chr15	51907666	51907667	chunk0068_68_1	33.92961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	51907609	51907684	-50083505	-	MIRb	SINE	MIR	-167	101	25	1
chr15	51924951	51924952	chunk0068_71_1	141.3643	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	51924901	51925066	-50066123	-	MIRb	SINE	MIR	-19	249	87	1
chr15	51933261	51933262	chunk0068_74_1	19.80502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	51933184	51933420	-50057769	-	ERVL-B4-int	LTR	ERVL	-2149	3565	3301	1
chr15	51984687	51984688	chunk0068_77_1	13.9693	AR_DHT_Control	chr15	51984648	51984848	-50006341	-	MER63A	DNA	hAT-Blackjack	0	210	7	1
chr15	51995379	51995380	chunk0068_81_1	73.7426	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	51995046	51995468	-49995721	-	LTR16A	LTR	ERVL	-2	449	6	1
chr15	52006889	52006890	chunk0068_83_1	7.07302	AR_DHT_Control	chr15	52006871	52007089	-49984100	-	Tigger16b	DNA	TcMar-Tigger	0	336	105	1
chr15	52011156	52011157	chunk0068_84_1	6.36834	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	52010988	52011242	-49979947	+	Tigger17c	DNA	TcMar-Tigger	2	264	-924	1
chr15	52011828	52011829	chunk0068_85_1	186.4921	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	52011770	52011883	-49979306	-	UCON40	Unknown	Unknown	-60	255	141	1
chr15	52071328	52071329	chunk0068_89_1	206.95	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	52071133	52071392	-49919797	+	L2a	LINE	L2	3119	3421	-5	1
chr15	52132404	52132405	chunk0068_91_1	23.5971	AR_DHT_Control	chr15	52132336	52132472	-49858717	+	L2a	LINE	L2	2660	2791	-628	1
chr15	52295713	52295714	chunk0068_104_1	6.25666	AR_DHT_Control	chr15	52295644	52295715	-49695474	+	G-rich	Low_complexity	Low_complexity	1	73	0	1
chr15	52296077	52296078	chunk0068_105_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52295994	52296782	-49694407	+	L1M5	LINE	L1	4210	5079	-1067	1
chr15	52436680	52436681	chunk0068_111_1	66.18113	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52436249	52436733	-49554456	+	L2a	LINE	L2	2882	3421	-5	1
chr15	52449482	52449483	chunk0068_114_1	12.1886	AR_DHT_Control	chr15	52449326	52449584	-49541605	+	L2c	LINE	L2	2911	3188	-199	1
chr15	52456844	52456845	chunk0068_116_1	21.73553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	52452863	52457159	-49534030	+	L1MA4A	LINE	L1	2428	6746	-816	1
chr15	52478801	52478802	chunk0068_119_1	23.04848	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	52478673	52479001	-49512188	-	Tigger2	DNA	TcMar-Tigger	-2127	591	263	1
chr15	52601438	52601439	chunk0068_123_1	23.7094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52601391	52601454	-49389735	-	Charlie15a	DNA	hAT-Charlie	-18	206	147	1
chr15	52624521	52624522	chunk0068_125_1	49.79796	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52624413	52624609	-49366580	+	MamSINE1	SINE	tRNA-RTE	23	222	-68	1
chr15	52698765	52698766	chunk0068_132_1	28.05575	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	52698275	52698845	-49292344	+	L1ME3	LINE	L1	5516	6134	-28	1
chr15	52706249	52706250	chunk0068_135_1	44.0578	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	52706034	52706514	-49284675	+	L1MC4	LINE	L1	6064	6515	-1367	1
chr15	52717796	52717797	chunk0068_136_1	8.03415	AR_DHT_Control	chr15	52717733	52717835	-49273354	-	LTR79	LTR	ERVL	-34	493	381	1
chr15	53565577	53565578	chunk0068_143_1	107.57477	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	53565348	53565898	-48425291	-	L1ME4b	LINE	L1	-56	836	261	1
chr15	53630801	53630802	chunk0068_148_1	205.8921	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	53630005	53631040	-48360149	+	L1M4	LINE	L1	3283	4319	-1827	1
chr15	53694904	53694905	chunk0068_149_1	6.6833	AR_DHT_Control	chr15	53694874	53695096	-48296093	+	MER58A	DNA	hAT-Charlie	1	221	-3	1
chr15	53730385	53730386	chunk0068_151_1	18.9236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	53730356	53730417	-48260772	+	L2b	LINE	L2	3229	3317	-70	1
chr15	53878013	53878014	chunk0068_155_1	22.8196	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	53877671	53878081	-48113108	-	L1ME2	LINE	L1	-7	6157	5763	1
chr15	54079123	54079124	chunk0068_163_1	77.6447	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	54077829	54082498	-47908691	-	L1PA17	LINE	L1	-16	6919	2175	1
chr15	54107789	54107790	chunk0068_168_1	8.15319	AR_DHT_Control	chr15	54107593	54107842	-47883347	+	L3b	LINE	CR1	4956	5227	-5	1
chr15	54173274	54173275	chunk0068_172_1	50.17247	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	54172778	54174304	-47816885	-	L1ME2z	LINE	L1	-1038	5108	3553	1
chr15	54174129	54174130	chunk0068_174_1	15.30653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	54172778	54174304	-47816885	-	L1ME2z	LINE	L1	-1038	5108	3553	1
chr15	54481075	54481076	chunk0068_180_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	54479168	54482712	-47508477	-	L1MA4A	LINE	L1	-3588	3974	358	1
chr15	54724888	54724889	chunk0068_184_1	22.5549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	54724433	54727273	-47263916	-	L1MA2	LINE	L1	-3116	4449	1540	1
chr15	54760964	54760965	chunk0068_185_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	54760245	54761640	-47229549	+	L1MA1	LINE	L1	521	2421	-5144	1
chr15	54868224	54868225	chunk0068_194_1	7.3267	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	54867317	54870295	-47120894	+	L1MA7	LINE	L1	3275	6289	-2	1
chr15	54944855	54944856	chunk0068_200_1	111.7202	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	54944760	54950216	-47040973	+	L1PA6	LINE	L1	717	6153	-1	1
chr15	54968375	54968376	chunk0068_203_1	8.7059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	54968193	54969256	-47021933	-	L1PA7	LINE	L1	-615	5539	4472	1
chr15	55004455	55004456	chunk0068_206_1	5.51262	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	55004424	55004556	-46986633	+	(TG)n	Simple_repeat	Simple_repeat	1	143	0	1
chr15	55055946	55055947	chunk0068_207_1	13.2699	AR_DHT_Control	chr15	55055917	55056053	-46935136	+	L2b	LINE	L2	3230	3374	-1	1
chr15	55201987	55201988	chunk0068_212_1	8.47279	AR_DHT_Control	chr15	55201831	55202357	-46788832	-	L2a	LINE	L2	0	3426	2920	1
chr15	55256058	55256059	chunk0068_220_1	104.2015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	55255889	55256078	-46735111	+	MIRc	SINE	MIR	32	254	-14	1
chr15	55348435	55348436	chunk0068_229_1	8.27376	AR_DHT_Control	chr15	55348397	55348792	-46642397	+	MSTB1	LTR	ERVL-MaLR	1	419	-13	1
chr15	55862140	55862141	chunk0068_242_1	80.0138	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	55861691	55862160	-46129029	-	L5	LINE	RTE-X	-567	1698	1208	1
chr15	55965112	55965113	chunk0068_247_1	31.6234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	55964742	55965150	-46026039	+	MSTA1	LTR	ERVL-MaLR	3	464	-1	1
chr15	56060169	56060170	chunk0068_252_1	8.52761	AR_DHT_Control	chr15	56059942	56060689	-45930500	+	L1MC1	LINE	L1	5	739	-5769	1
chr15	56292195	56292196	chunk0068_259_1	20.93515	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	56291714	56292618	-45698571	+	ERV3-16A3_I-int	LTR	ERVL	4117	5048	-178	1
chr15	56422407	56422408	chunk0068_262_1	20.32857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	56422281	56422638	-45568551	-	L1MEc	LINE	L1	-4024	2376	1948	1
chr15	56423038	56423039	chunk0068_264_1	46.09407	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	56422647	56423123	-45568066	-	L1MB2	LINE	L1	-2	6770	6281	1
chr15	56451535	56451536	chunk0068_266_1	14.1125	AR_DHT_Control	chr15	56451144	56451566	-45539623	-	L1MB4	LINE	L1	-6158	449	9	1
chr15	56628078	56628079	chunk0068_267_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	56628038	56628131	-45363058	-	Tigger3b	DNA	TcMar-Tigger	-1123	108	1	1
chr15	56685516	56685517	chunk0068_274_1	11.0019	AR_DHT_Control	chr15	56685374	56686137	-45305052	+	L1M7	LINE	L1	1852	2490	-3725	1
chr15	56724001	56724002	chunk0068_277_1	22.9384	AR_DHT_Control	chr15	56723796	56724210	-45266979	-	MER47B	DNA	TcMar-Tigger	-1	417	1	1
chr15	56773054	56773055	chunk0068_279_1	6.48643	AR_DHT_Control	chr15	56772845	56773059	-45218130	-	L2	LINE	L2	-1545	1874	1659	1
chr15	56969029	56969030	chunk0068_287_1	63.94285	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	56968673	56969268	-45021921	-	MER4A1_	LTR	ERV1	-1	599	1	1
chr15	56974645	56974646	chunk0068_289_1	26.3425	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	56974582	56974805	-45016384	-	MIRb	SINE	MIR	-32	230	14	1
chr15	57053641	57053642	chunk0068_296_1	37.90784	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	57053626	57053800	-44937389	+	MER58A	DNA	hAT-Charlie	50	224	0	1
chr15	57185973	57185974	chunk0068_305_1	22.9169	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	57185907	57186216	-44804973	+	L1MB5	LINE	L1	3216	3522	-2624	1
chr15	57263732	57263733	chunk0068_311_1	9.08241	AR_DHT_Control	chr15	57263639	57264195	-44726994	-	Tigger3b	DNA	TcMar-Tigger	-2	1229	606	1
chr15	57307802	57307803	chunk0068_312_1	12.76603	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	57307654	57307873	-44683316	-	MamRep564	Unknown	Unknown	-69	288	62	1
chr15	57412640	57412641	chunk0068_317_1	10.3253	AR_DHT_Control	chr15	57412520	57412827	-44578362	-	L3	LINE	CR1	-63	4036	3736	1
chr15	57522447	57522448	chunk0068_325_1	10.2147	AR_DHT_Control	chr15	57522370	57522457	-44468732	+	MIRc	SINE	MIR	179	267	-1	1
chr15	57529052	57529053	chunk0068_327_1	192.8532	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	57528986	57529117	-44462072	-	MIR3	SINE	MIR	-3	205	76	1
chr15	57673946	57673947	chunk0068_337_1	16.05872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	57673942	57674050	-44317139	-	L2c	LINE	L2	0	3387	3279	1
chr15	57759195	57759196	chunk0068_346_1	11.8369	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	57759153	57759310	-44231879	-	MIR	SINE	MIR	-72	190	2	1
chr15	57827239	57827240	chunk0068_350_1	129.1869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	57827175	57827281	-44163908	-	L4_A_Mam	LINE	RTE-X	-146	4844	4719	1
chr15	57975172	57975173	chunk0068_358_1	94.86855	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	57974461	57975387	-44015802	+	L1ME1	LINE	L1	4841	5781	-398	1
chr15	57988058	57988059	chunk0068_360_1	4.67225	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	57987900	57988474	-44002715	+	L1MEc	LINE	L1	1694	2328	-4072	1
chr15	58027059	58027060	chunk0068_363_1	13.6548	AR_DHT_Control	chr15	58026398	58032514	-43958675	+	L1PA4	LINE	L1	5	6151	-4	1
chr15	58038740	58038741	chunk0068_365_1	93.1151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	58038730	58038771	-43952418	+	(TGGTAA)n	Simple_repeat	Simple_repeat	1	41	0	1
chr15	58056626	58056627	chunk0068_368_1	4.83636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	58056598	58057590	-43933599	+	L1ME3Cz	LINE	L1	6	986	-11	1
chr15	58159914	58159915	chunk0068_371_1	15.44117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	58159370	58160425	-43830764	-	L1MA4	LINE	L1	-1	6299	5235	1
chr15	58644597	58644598	chunk0068_397_1	11.4219	AR_DHT_Control	chr15	58644542	58644701	-43346488	+	L2b	LINE	L2	2975	3170	-217	1
chr15	58701651	58701652	chunk0068_400_1	52.904	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	58701135	58701823	-43289366	+	L1MA4A	LINE	L1	6603	7249	-336	1
chr15	58962989	58962990	chunk0068_405_1	10.186	AR_DHT_Control	chr15	58962929	58963345	-43027844	+	L4_A_Mam	LINE	RTE-X	4571	4990	0	1
chr15	59005214	59005215	chunk0068_407_1	101.96065	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	59005197	59005318	-42985871	-	AluJo	SINE	Alu	-181	131	1	1
chr15	59011841	59011842	chunk0068_409_1	9.19742	AR_DHT_Control	chr15	59011449	59011853	-42979336	-	MLT1B	LTR	ERVL-MaLR	0	390	1	1
chr15	59075313	59075314	chunk0068_411_1	16.02622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	59073503	59075319	-42915870	-	Tigger1	DNA	TcMar-Tigger	-589	1829	2	1
chr15	59120250	59120251	chunk0068_412_1	5.6503	AR_DHT_Control	chr15	59120007	59120345	-42870844	+	L1MC5a	LINE	L1	1244	1580	-1197	1
chr15	59370565	59370566	chunk0068_425_1	10.3077	AR_DHT_Control	chr15	59370419	59370570	-42620619	-	MER130	DNA	DNA	-309	1285	1117	1
chr15	59456206	59456207	chunk0068_426_1	5.6425	AR_DHT_Control	chr15	59455944	59456381	-42534808	-	L2c	LINE	L2	0	3387	2913	1
chr15	59488341	59488342	chunk0068_429_1	68.2766	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	59487292	59488694	-42502495	+	L1MA3	LINE	L1	4431	5833	-1732	1
chr15	59549816	59549817	chunk0068_431_1	13.433	AR_DHT_Control	chr15	59549701	59550227	-42440962	-	MER4B	LTR	ERV1	-11	599	3	1
chr15	59605065	59605066	chunk0068_437_1	12.4926	AR_DHT_Control	chr15	59605039	59605435	-42385754	+	MER57B2	LTR	ERV1	8	403	0	1
chr15	59636239	59636240	chunk0068_438_1	13.838	AR_DHT_Control	chr15	59636217	59636767	-42354422	-	L1PA10	LINE	L1	-17	6151	5585	1
chr15	59689997	59689998	chunk0068_444_1	6.20921	AR_DHT_Control	chr15	59689817	59690122	-42301067	+	AluSq2	SINE	Alu	1	313	0	1
chr15	59784000	59784001	chunk0068_449_1	78.4496	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	59781126	59784821	-42206368	-	L1PB	LINE	L1	-2452	3694	1	1
chr15	59786230	59786231	chunk0068_450_1	17.0601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	59784825	59786415	-42204774	+	L1PB	LINE	L1	3724	5326	-820	1
chr15	60035565	60035566	chunk0069_6_1	31.0993	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	60035391	60036092	-41955097	+	Tigger3b	DNA	TcMar-Tigger	2	716	-515	1
chr15	60200901	60200902	chunk0069_12_1	33.6142	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	60200816	60201011	-41790178	-	MIR	SINE	MIR	-26	236	4	1
chr15	60264603	60264604	chunk0069_13_1	18.25357	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	60264566	60264613	-41726576	+	(T)n	Simple_repeat	Simple_repeat	1	47	0	1
chr15	60335565	60335566	chunk0069_15_1	8.7059	AR_DHT_Control	chr15	60331600	60335816	-41655373	+	L1PA3	LINE	L1	1840	6154	-1	1
chr15	60440039	60440040	chunk0069_25_1	145.8968	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	60439682	60440318	-41550871	-	Tigger6a	DNA	TcMar-Tigger	-340	743	2	1
chr15	60479522	60479523	chunk0069_31_1	5.73759	AR_DHT_Control	chr15	60479376	60479559	-41511630	+	MIR	SINE	MIR	72	252	-10	1
chr15	60508503	60508504	chunk0069_37_1	4.85178	AR_DHT_Control	chr15	60508441	60508805	-41482384	-	MIR	SINE	MIR	-1	261	3	1
chr15	60758401	60758402	chunk0069_57_1	39.45639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	60758356	60758774	-41232415	-	CR1_Mam	LINE	CR1	-1210	994	581	1
chr15	60776996	60776997	chunk0069_58_1	13.1449	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	60776801	60777077	-41214112	+	L2a	LINE	L2	3148	3426	0	1
chr15	60807766	60807767	chunk0069_60_1	26.79972	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	60807347	60808702	-41182487	+	L1PB	LINE	L1	4411	5790	-361	1
chr15	60852448	60852449	chunk0069_64_1	16.03596	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	60852361	60852541	-41138648	+	MIRb	SINE	MIR	79	253	-15	1
chr15	60984653	60984654	chunk0069_73_1	28.19728	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	60984602	60984927	-41006262	+	MER5C	DNA	hAT-Charlie	1	298	-15	1
chr15	61030037	61030038	chunk0069_76_1	7.72091	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	61030029	61030432	-40960757	+	L1MC4	LINE	L1	7471	7900	-142	1
chr15	61033125	61033126	chunk0069_77_1	16.36242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	61032909	61033134	-40958055	-	MIRb	SINE	MIR	-1	267	15	1
chr15	61079674	61079675	chunk0069_80_1	6.35715	AR_DHT_Control	chr15	61079666	61079762	-40911427	-	L2b	LINE	L2	-6	3369	3263	1
chr15	61108576	61108577	chunk0069_83_1	8.31466	AR_DHT_Control	chr15	61108405	61108621	-40882568	+	MER58A	DNA	hAT-Charlie	1	224	0	1
chr15	61295493	61295494	chunk0069_93_1	12.95731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	61295154	61295535	-40695654	+	MLT2C1	LTR	ERVL	1	397	0	1
chr15	61328213	61328214	chunk0069_95_1	4.22747	AR_DHT_Control	chr15	61328102	61328394	-40662795	-	L1ME3Cz	LINE	L1	-525	472	189	1
chr15	61353492	61353493	chunk0069_96_1	26.19939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	61353483	61353811	-40637378	-	MLT1J1	LTR	ERVL-MaLR	-101	343	1	1
chr15	61389777	61389778	chunk0069_98_1	58.4813	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	61389684	61389813	-40601376	+	MIRc	SINE	MIR	29	156	-112	1
chr15	61422027	61422028	chunk0069_102_1	145.8106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	61421967	61422242	-40568947	+	L2b	LINE	L2	3052	3336	-39	1
chr15	61561292	61561293	chunk0069_104_1	8.02791	AR_DHT_Control	chr15	61561244	61561594	-40429595	+	L2	LINE	L2	2694	3072	-347	1
chr15	61607912	61607913	chunk0069_105_1	3.68809	AR_DHT_Control	chr15	61607747	61607967	-40383222	-	MER58A	DNA	hAT-Charlie	0	224	2	1
chr15	61772348	61772349	chunk0069_122_1	12.1886	AR_DHT_Control	chr15	61772097	61773495	-40217694	+	L1MEc	LINE	L1	879	2316	-4084	1
chr15	61796244	61796245	chunk0069_123_1	12.5882	AR_DHT_Control	chr15	61796134	61796642	-40194547	-	L1ME1	LINE	L1	-285	5894	5363	1
chr15	61857332	61857333	chunk0069_124_1	192.9403	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	61857144	61857545	-40133644	-	L2c	LINE	L2	-4	3383	2910	1
chr15	62109380	62109381	chunk0069_132_1	8.00425	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	62109177	62109953	-39881236	-	Charlie15b	DNA	hAT-Charlie	-196	865	37	1
chr15	62113016	62113017	chunk0069_135_1	78.31172	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	62112975	62113116	-39878073	-	MIRb	SINE	MIR	-90	172	25	1
chr15	62125695	62125696	chunk0069_138_1	6.45888	AR_DHT_Control	chr15	62125688	62125743	-39865446	-	L1MEi	LINE	L1	-886	1326	1272	1
chr15	62210006	62210007	chunk0069_140_1	17.28852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	62209713	62210204	-39780985	-	MER9B	LTR	ERVK	0	499	1	1
chr15	62436415	62436416	chunk0069_143_1	27.63904	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	62436179	62436659	-39554530	-	L2b	LINE	L2	-2	3424	2939	1
chr15	62506393	62506394	chunk0069_151_1	44.3881	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	62506369	62506417	-39484772	+	L2b	LINE	L2	3328	3375	0	1
chr15	62528722	62528723	chunk0069_156_1	42.3279	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	62528245	62528800	-39462389	-	LTR102_Mam	LTR	ERVL	0	851	250	1
chr15	62542079	62542080	chunk0069_159_1	7.97539	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	62542023	62542125	-39449064	-	MIRb	SINE	MIR	-16	252	144	1
chr15	62728487	62728488	chunk0069_165_1	90.8218	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	62727969	62729555	-39261634	-	L1ME3A	LINE	L1	-12	6334	4616	1
chr15	62788522	62788523	chunk0069_170_1	84.7771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	62788456	62788628	-39202561	-	MIRb	SINE	MIR	-2	266	85	1
chr15	62853950	62853951	chunk0069_173_1	54.5066	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	62853758	62853981	-39137208	-	MER58C	DNA	hAT-Charlie	0	215	4	1
chr15	63121647	63121648	chunk0069_184_1	9.21433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	63121642	63121702	-38869487	+	GA-rich	Low_complexity	Low_complexity	1	60	0	1
chr15	63332841	63332842	chunk0069_193_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	63332831	63333266	-38657923	-	L2c	LINE	L2	-3	3384	2916	1
chr15	63349784	63349785	chunk0069_196_1	7.11634	AR_DHT_Control	chr15	63349754	63349861	-38641328	+	L2c	LINE	L2	3269	3382	-5	1
chr15	63362370	63362371	chunk0069_197_1	7.64898	AR_DHT_Control	chr15	63362225	63362434	-38628755	-	MIR	SINE	MIR	-43	219	22	1
chr15	63466497	63466498	chunk0069_204_1	48.3182	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	63466422	63466531	-38524658	+	L2a	LINE	L2	3299	3424	-2	1
chr15	63474629	63474630	chunk0069_209_1	106.97483	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	63474603	63474856	-38516333	-	MIRb	SINE	MIR	-3	265	1	1
chr15	63497917	63497918	chunk0069_210_1	15.2298	AR_DHT_Control	chr15	63497648	63498105	-38493084	+	L2c	LINE	L2	2929	3385	-2	1
chr15	63502262	63502263	chunk0069_211_1	12.8218	AR_DHT_Control	chr15	63502166	63502301	-38488888	-	L2b	LINE	L2	-2	3424	3220	1
chr15	63520035	63520036	chunk0069_214_1	17.8382	AR_DHT_Control	chr15	63519064	63520554	-38470635	-	L1MC4	LINE	L1	-148	7847	6213	1
chr15	63778586	63778587	chunk0069_225_1	7.69414	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	63777992	63779575	-38211614	+	L1MC4	LINE	L1	7	2692	-3522	1
chr15	63925400	63925401	chunk0069_232_1	30.12829	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	63925294	63925440	-38065749	+	MER115	DNA	hAT-Tip100	42	203	-490	1
chr15	64116909	64116910	chunk0069_241_1	40.61894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	64116861	64117206	-37873983	-	Tigger15a	DNA	TcMar-Tigger	-30	685	287	1
chr15	64287952	64287953	chunk0069_245_1	21.7803	AR_DHT_Control	chr15	64287830	64288020	-37703169	+	HAL1	LINE	L1	1	203	-2304	1
chr15	64344767	64344768	chunk0069_246_1	16.25771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	64344680	64344875	-37646314	+	MIR3	SINE	MIR	14	205	-3	1
chr15	64453738	64453739	chunk0069_252_1	19.47051	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	64453731	64453774	-37537415	+	GA-rich	Low_complexity	Low_complexity	1	43	0	1
chr15	64524836	64524837	chunk0069_257_1	5.37069	AR_DHT_Control	chr15	64524578	64525196	-37465993	-	L1MB7	LINE	L1	-283	5901	5241	1
chr15	64536408	64536409	chunk0069_258_1	5.6425	AR_DHT_Control	chr15	64536321	64536503	-37454686	+	MLT1N2	LTR	ERVL-MaLR	393	562	0	1
chr15	64558691	64558692	chunk0069_259_1	7.09019	AR_DHT_Control	chr15	64558492	64558738	-37432451	+	L2b	LINE	L2	3085	3376	-11	1
chr15	64572189	64572190	chunk0069_260_1	11.7184	AR_DHT_Control	chr15	64572166	64572213	-37418976	+	L2a	LINE	L2	3129	3175	-251	1
chr15	64599918	64599919	chunk0069_262_1	5.12066	AR_DHT_Control	chr15	64599759	64600010	-37391179	+	L2b	LINE	L2	2954	3236	-139	1
chr15	64637144	64637145	chunk0069_264_1	42.7055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	64636911	64637994	-37353195	-	L1ME3A	LINE	L1	-13	6160	5024	1
chr15	64640306	64640307	chunk0069_265_1	8.85686	AR_DHT_Control	chr15	64640208	64640332	-37350857	-	AluJo	SINE	Alu	-182	130	6	1
chr15	64669127	64669128	chunk0069_268_1	10.8017	AR_DHT_Control	chr15	64668984	64669570	-37321619	+	L1ME4b	LINE	L1	164	829	-63	1
chr15	64938262	64938263	chunk0069_276_1	8.68286	AR_DHT_Control	chr15	64937837	64938669	-37052520	+	L1MC3	LINE	L1	6738	7584	-201	1
chr15	64943778	64943779	chunk0069_277_1	5.50529	AR_DHT_Control	chr15	64943641	64943867	-37047322	+	L2c	LINE	L2	3056	3273	-102	1
chr15	65161221	65161222	chunk0069_284_1	21.36924	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	65161153	65161393	-36829796	+	MamRep137	DNA	TcMar-Tigger	246	489	-21	1
chr15	65326339	65326340	chunk0069_294_1	16.1482	AR_DHT_Control	chr15	65326281	65326367	-36664822	+	MIR	SINE	MIR	77	169	-93	1
chr15	65342869	65342870	chunk0069_295_1	5.81334	AR_DHT_Control	chr15	65342833	65342927	-36648262	-	FLAM_A	SINE	Alu	0	142	65	1
chr15	65354560	65354561	chunk0069_297_1	21.2697	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	65354486	65354680	-36636509	+	L2c	LINE	L2	3199	3368	-19	1
chr15	65524832	65524833	chunk0069_299_1	12.1886	AR_DHT_Control	chr15	65524505	65525194	-36465995	-	MER49	LTR	ERV1	-33	890	198	1
chr15	65541370	65541371	chunk0069_303_1	27.6989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	65541210	65541376	-36449813	-	Kanga1a	DNA	TcMar-Tc2	-4	750	587	1
chr15	65970949	65970950	chunk0069_323_1	4.22747	AR_DHT_Control	chr15	65970875	65971065	-36020124	-	L2c	LINE	L2	0	3387	3183	1
chr15	66000596	66000597	chunk0069_324_1	33.10239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	66000571	66000667	-35990522	+	L2a	LINE	L2	3337	3426	0	1
chr15	66261225	66261226	chunk0069_331_1	13.1346	AR_DHT_Control	chr15	66260920	66261259	-35729930	+	L2c	LINE	L2	3038	3377	-10	1
chr15	66482622	66482623	chunk0069_341_1	37.08475	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	66482613	66482731	-35508458	+	L2b	LINE	L2	3245	3375	0	1
chr15	66554580	66554581	chunk0069_344_1	10.8743	AR_DHT_Control	chr15	66554546	66554845	-35436344	+	L1ME4b	LINE	L1	335	657	-235	1
chr15	66813153	66813154	chunk0069_355_1	15.2076	AR_DHT_Control	chr15	66811397	66814133	-35177056	-	L1PA6	LINE	L1	-3403	2743	5	1
chr15	67079629	67079630	chunk0069_359_1	16.9805	AR_DHT_Control	chr15	67079596	67079738	-34911451	-	MIRb	SINE	MIR	-14	254	106	1
chr15	67147173	67147174	chunk0069_362_1	14.38203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	67147147	67147177	-34844012	+	(GA)n	Simple_repeat	Simple_repeat	1	32	0	1
chr15	67506028	67506029	chunk0069_381_1	21.41085	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	67505943	67506474	-34484715	-	MER67A	LTR	ERV1	0	543	1	1
chr15	67750552	67750553	chunk0069_393_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	67750506	67750678	-34240511	+	MER5A	DNA	hAT-Charlie	1	188	-1	1
chr15	67917715	67917716	chunk0069_405_1	41.12917	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	67917495	67917948	-34073241	-	LTR23	LTR	ERV1	0	467	1	1
chr15	67941965	67941966	chunk0069_409_1	4.28535	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	67941905	67942192	-34048997	+	Charlie16a	DNA	hAT-Charlie	58	340	-2	1
chr15	68019492	68019493	chunk0069_412_1	48.1589	AR_DHT_Control	chr15	68019144	68019561	-33971628	-	L2b	LINE	L2	-1	3374	3000	1
chr15	68028685	68028686	chunk0069_416_1	73.3023	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	68028492	68028775	-33962414	-	MER58B	DNA	hAT-Charlie	0	341	56	1
chr15	68042426	68042427	chunk0069_419_1	141.1654	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	68042386	68043046	-33948143	-	L1MB4	LINE	L1	-5749	858	166	1
chr15	68084691	68084692	chunk0069_422_1	6.10159	AR_DHT_Control	chr15	68084657	68084702	-33906487	+	(TTCA)n	Simple_repeat	Simple_repeat	1	46	0	1
chr15	68109410	68109411	chunk0069_425_1	8.6237	AR_DHT_Control	chr15	68108460	68109491	-33881698	+	L2a	LINE	L2	2240	3422	-4	1
chr15	68309263	68309264	chunk0069_429_1	7.73888	AR_DHT_Control	chr15	68308785	68309409	-33681780	+	HSMAR2	DNA	TcMar-Mariner	340	964	-338	1
chr15	68352563	68352564	chunk0069_434_1	5.95209	AR_DHT_Control	chr15	68352543	68352779	-33638410	-	MamTip1	DNA	hAT-Tip100	-27	240	5	1
chr15	68435112	68435113	chunk0069_437_1	7.38582	AR_DHT_Control	chr15	68434661	68435327	-33555862	-	L1MB7	LINE	L1	-30	6154	5527	1
chr15	68537642	68537643	chunk0069_443_1	6.54035	AR_DHT_Control	chr15	68537486	68537747	-33453442	-	L1PA10	LINE	L1	0	6168	5902	1
chr15	68592756	68592757	chunk0069_444_1	143.7525	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	68592724	68592774	-33398415	+	(TGTAC)n	Simple_repeat	Simple_repeat	1	53	0	1
chr15	68601986	68601987	chunk0069_446_1	8.80746	AR_DHT_Control	chr15	68601793	68602156	-33389033	-	MLT1A1	LTR	ERVL-MaLR	0	408	1	1
chr15	68716464	68716465	chunk0069_450_1	29.9728	AR_DHT_Control	chr15	68716423	68717022	-33274167	-	L2a	LINE	L2	-6	3420	2800	1
chr15	68803188	68803189	chunk0070_4_1	30.3757	AR_DHT_Control	chr15	68803149	68803315	-33187874	+	MIRb	SINE	MIR	90	257	-11	1
chr15	68944765	68944766	chunk0070_15_1	42.9702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	68944636	68944826	-33046363	-	MER58A	DNA	hAT-Charlie	-10	214	13	1
chr15	69052783	69052784	chunk0070_19_1	29.0368	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	69052393	69053163	-32938026	+	LTR106_Mam	LTR	LTR	3	708	0	1
chr15	69057268	69057269	chunk0070_21_1	7.08233	AR_DHT_Control	chr15	69057084	69057299	-32933890	-	L1ME2z	LINE	L1	0	6444	6224	1
chr15	69173097	69173098	chunk0070_22_1	21.93816	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	69172585	69173537	-32817652	+	L3	LINE	CR1	2969	3900	-199	1
chr15	69210758	69210759	chunk0070_24_1	8.02791	AR_DHT_Control	chr15	69210742	69210941	-32780248	+	MER58A	DNA	hAT-Charlie	1	224	0	1
chr15	69222214	69222215	chunk0070_25_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	69221889	69222526	-32768663	-	L1P4e	LINE	L1	-5084	1207	460	1
chr15	69288919	69288920	chunk0070_27_1	34.43235	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	69288875	69289015	-32702174	+	MIRb	SINE	MIR	58	195	-73	1
chr15	69307347	69307348	chunk0070_30_1	4.46365	AR_DHT_Control	chr15	69307189	69307396	-32683793	-	L1MB3	LINE	L1	-396	5787	5574	1
chr15	69343427	69343428	chunk0070_31_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	69343197	69343551	-32647638	+	Kanga2_a	DNA	TcMar-Tc2	8	362	-526	1
chr15	69367030	69367031	chunk0070_33_1	12.09071	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	69366521	69367384	-32623805	-	L1MEd	LINE	L1	-3315	2831	1932	1
chr15	69562308	69562309	chunk0070_51_1	65.4803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	69562248	69562313	-32428876	+	L2b	LINE	L2	3309	3373	-2	1
chr15	69562308	69562309	chunk0070_51_1	65.4803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	69562288	69562545	-32428644	-	MIRc	SINE	MIR	-5	257	1	1
chr15	69587953	69587954	chunk0070_53_1	48.72914	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	69587936	69587993	-32403196	-	MIRc	SINE	MIR	-194	74	15	1
chr15	69736266	69736267	chunk0070_67_1	4.81216	AR_DHT_Control	chr15	69736177	69736322	-32254867	-	MIRc	SINE	MIR	-3	205	61	1
chr15	69930677	69930678	chunk0070_72_1	7.29426	AR_DHT_Control	chr15	69930551	69930708	-32060481	+	L3	LINE	CR1	3769	3924	-175	1
chr15	69951798	69951799	chunk0070_73_1	22.7274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	69951249	69952060	-32039129	+	L1ME4b	LINE	L1	133	825	-67	1
chr15	70091691	70091692	chunk0070_77_1	23.82708	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	70091662	70091707	-31899482	+	(AGACAG)n	Simple_repeat	Simple_repeat	1	45	0	1
chr15	70174050	70174051	chunk0070_87_1	6.25666	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	70174050	70174221	-31816968	-	MIR3	SINE	MIR	-28	180	13	1
chr15	70177953	70177954	chunk0070_88_1	5.81492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	70177886	70178194	-31812995	-	AluSz6	SINE	Alu	-5	307	1	1
chr15	70271617	70271618	chunk0070_89_1	5.26765	AR_DHT_Control	chr15	70270838	70271841	-31719348	+	ERVL-B4-int	LTR	ERVL	4184	5277	-437	1
chr15	70368572	70368573	chunk0070_103_1	90.6932	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	70367847	70370921	-31620268	+	L1PA6	LINE	L1	134	3160	-2986	1
chr15	70421216	70421217	chunk0070_107_1	7.51711	AR_DHT_Control	chr15	70420934	70421452	-31569737	+	L2a	LINE	L2	2836	3426	0	1
chr15	70439480	70439481	chunk0070_108_1	8.65676	AR_DHT_Control	chr15	70439440	70439799	-31551390	+	MLT1A	LTR	ERVL-MaLR	1	374	0	1
chr15	70508122	70508123	chunk0070_112_1	4.67092	AR_DHT_Control	chr15	70507989	70508147	-31483042	-	MIRb	SINE	MIR	-18	250	75	1
chr15	70552220	70552221	chunk0070_113_1	7.2534	AR_DHT_Control	chr15	70551855	70552302	-31438887	-	L2c	LINE	L2	-203	3184	2728	1
chr15	70617129	70617130	chunk0070_116_1	17.13622	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	70617128	70617388	-31373801	+	LTR86C	LTR	ERVL	337	619	-2	1
chr15	70712971	70712972	chunk0070_117_1	18.15391	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	70712959	70713063	-31278126	-	L2b	LINE	L2	-81	3294	3191	1
chr15	70778914	70778915	chunk0070_127_1	8.79298	AR_DHT_Control	chr15	70778828	70778961	-31212228	+	L2a	LINE	L2	3288	3426	0	1
chr15	70874900	70874901	chunk0070_129_1	20.95321	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	70874839	70874932	-31116257	-	L2a	LINE	L2	-2	3424	3309	1
chr15	70913864	70913865	chunk0070_134_1	5.32898	AR_DHT_Control	chr15	70913734	70914262	-31076927	+	Charlie14a	DNA	hAT-Charlie	77	611	-555	1
chr15	70966085	70966086	chunk0070_136_1	18.68452	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	70965945	70966122	-31025067	+	MER58A	DNA	hAT-Charlie	38	222	-2	1
chr15	71071707	71071708	chunk0070_141_1	31.74348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	71071558	71072041	-30919148	+	LTR40a	LTR	ERVL	1	515	-4	1
chr15	71079249	71079250	chunk0070_144_1	45.0066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	71079220	71079316	-30911873	+	MIR3	SINE	MIR	98	204	-4	1
chr15	71199787	71199788	chunk0070_153_1	13.60046	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	71199439	71199936	-30791253	+	(TG)n	Simple_repeat	Simple_repeat	1	522	0	1
chr15	71252197	71252198	chunk0070_157_1	16.0254	AR_DHT_Control	chr15	71252162	71252303	-30738886	-	UCON43	Unknown	Unknown	-6	166	26	1
chr15	71291662	71291663	chunk0070_159_1	5.40372	AR_DHT_Control	chr15	71291270	71291758	-30699431	-	MLT2B4	LTR	ERVL	0	556	6	1
chr15	71295184	71295185	chunk0070_160_1	8.27423	AR_DHT_Control	chr15	71295146	71295188	-30696001	+	L2	LINE	L2	2700	2742	-677	1
chr15	71295184	71295185	chunk0070_160_1	8.27423	AR_DHT_Control	chr15	71295168	71295364	-30695825	-	MIRb	SINE	MIR	-66	202	5	1
chr15	71626855	71626856	chunk0070_175_1	93.71949	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	71625976	71627094	-30364095	-	L1M5	LINE	L1	-1628	4518	3405	1
chr15	71654151	71654152	chunk0070_177_1	34.3512	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	71653990	71654212	-30336977	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr15	71669120	71669121	chunk0070_178_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	71668938	71669228	-30321961	-	L1ME4b	LINE	L1	-395	5729	5470	1
chr15	71717563	71717564	chunk0070_181_1	8.41215	AR_DHT_Control	chr15	71717470	71717565	-30273624	+	L1ME5	LINE	L1	6084	6186	-8	1
chr15	71834015	71834016	chunk0070_184_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	71832256	71834490	-30156699	+	L1ME3B	LINE	L1	1338	3865	-2454	1
chr15	71868207	71868208	chunk0070_186_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	71867954	71868620	-30122569	-	MLT1E2	LTR	ERVL-MaLR	0	627	1	1
chr15	71962761	71962762	chunk0070_189_1	8.8907	AR_DHT_Control	chr15	71962564	71962801	-30028388	-	MIRb	SINE	MIR	-6	256	4	1
chr15	72033541	72033542	chunk0070_190_1	23.56185	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	72033455	72033800	-29957389	+	L1ME1	LINE	L1	5781	6167	-12	1
chr15	72035325	72035326	chunk0070_192_1	6.13982	AR_DHT_Control	chr15	72034955	72035528	-29955661	+	L1ME1	LINE	L1	5338	5900	-279	1
chr15	72060890	72060891	chunk0070_193_1	8.7059	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	72060423	72062737	-29928452	+	L1M1	LINE	L1	172	2523	-5042	1
chr15	72071094	72071095	chunk0070_194_1	8.27376	AR_DHT_Control	chr15	72070702	72071458	-29919731	+	L1P4	LINE	L1	4790	5557	-609	1
chr15	72153441	72153442	chunk0070_200_1	24.8508	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	72153350	72153546	-29837643	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr15	72359169	72359170	chunk0070_210_1	9.45492	AR_DHT_Control	chr15	72359107	72359262	-29631927	+	MIR3	SINE	MIR	30	203	-5	1
chr15	72493429	72493430	chunk0070_214_1	54.07429	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	72493215	72493718	-29497471	+	Charlie15b	DNA	hAT-Charlie	166	721	-340	1
chr15	72626205	72626206	chunk0070_217_1	32.3768	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	72626142	72626248	-29364941	-	L1MD2	LINE	L1	-424	5935	5836	1
chr15	72734185	72734186	chunk0070_223_1	239.1883	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	72733296	72734226	-29256963	-	L1PREC2	LINE	L1	0	6160	5176	1
chr15	72754642	72754643	chunk0070_224_1	7.91804	AR_DHT_Control	chr15	72754337	72755028	-29236161	+	L1ME4b	LINE	L1	180	891	-1	1
chr15	72814789	72814790	chunk0070_225_1	17.69064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	72814731	72815394	-29175795	-	L1ME5	LINE	L1	-57	6137	5393	1
chr15	72865795	72865796	chunk0070_227_1	60.40205	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	72865729	72865801	-29125388	+	L2	LINE	L2	3009	3080	-339	1
chr15	72879763	72879764	chunk0070_228_1	17.7298	AR_DHT_Control	chr15	72879623	72880083	-29111106	-	L1ME1	LINE	L1	-3376	2943	2473	1
chr15	72897660	72897661	chunk0070_230_1	130.176	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	72897113	72897815	-29093374	-	L1MC2	LINE	L1	-8	6336	5571	1
chr15	72980261	72980262	chunk0070_233_1	10.186	AR_DHT_Control	chr15	72979828	72980498	-29010691	+	L1ME1	LINE	L1	5478	6163	-16	1
chr15	73001038	73001039	chunk0070_235_1	17.11256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	73000613	73001487	-28989702	-	L1ME4b	LINE	L1	-17	875	14	1
chr15	73058155	73058156	chunk0070_239_1	17.91934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	73058014	73058169	-28933020	-	L1ME3G	LINE	L1	-238	686	538	1
chr15	73150871	73150872	chunk0070_242_1	17.58272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	73150394	73151032	-28840157	-	L1ME2z	LINE	L1	-5	6439	5772	1
chr15	73380410	73380411	chunk0070_244_1	6.3364	AR_DHT_Control	chr15	73379983	73380451	-28610738	+	MER67A	LTR	ERV1	1	543	0	1
chr15	73504971	73504972	chunk0070_247_1	39.7534	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	73504934	73505029	-28486160	+	L2c	LINE	L2	2962	3056	-319	1
chr15	73630257	73630258	chunk0070_254_1	7.14145	AR_DHT_Control	chr15	73630098	73630329	-28360860	-	MIR	SINE	MIR	-2	260	2	1
chr15	73637743	73637744	chunk0070_256_1	44.3774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	73637551	73637811	-28353378	-	MamGypLTR1b	LTR	Gypsy	-37	745	477	1
chr15	73654631	73654632	chunk0070_257_1	4.19197	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	73654579	73655098	-28336091	+	MER34A1	LTR	ERV1	11	568	-19	1
chr15	73984404	73984405	chunk0070_265_1	7.09275	AR_DHT_Control	chr15	73984216	73984425	-28006764	+	MIRb	SINE	MIR	16	242	-26	1
chr15	74149141	74149142	chunk0070_272_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	74148502	74149347	-27841842	-	L1MD	LINE	L1	-865	5281	4422	1
chr15	74360092	74360093	chunk0070_277_1	128.0009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	74359785	74360275	-27630914	+	MER41-int	LTR	ERV1	2816	3327	-4489	1
chr15	74506144	74506145	chunk0070_280_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	74506141	74506319	-27484870	+	MLT1L	LTR	ERVL-MaLR	1	185	-425	1
chr15	74595319	74595320	chunk0070_287_1	121.4018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	74595073	74595337	-27395852	-	AluJr	SINE	Alu	-40	272	1	1
chr15	74779385	74779386	chunk0070_295_1	195.4471	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	74779138	74779520	-27211669	-	MER83	LTR	ERV1	-52	396	1	1
chr15	74986331	74986332	chunk0070_307_1	13.8249	AR_DHT_Control	chr15	74986276	74986726	-27004463	-	L2c	LINE	L2	-236	3139	2658	1
chr15	75054669	75054670	chunk0070_308_1	16.0516	AR_DHT_Control	chr15	75054288	75054765	-26936424	+	L1ME4b	LINE	L1	346	816	-76	1
chr15	75142929	75142930	chunk0070_309_1	6.24504	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	75142850	75142937	-26848252	-	MER52-int	LTR	ERV1	-5360	1731	1645	1
chr15	75493943	75493944	chunk0070_324_1	117.926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	75493942	75494131	-26497058	+	MER58A	DNA	hAT-Charlie	4	222	-2	1
chr15	75863047	75863048	chunk0070_343_1	12.6794	AR_DHT_Control	chr15	75862839	75863354	-26127835	-	HAL1	LINE	L1	-1712	795	96	1
chr15	75983172	75983173	chunk0070_351_1	20.67838	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	75982519	75983337	-26007852	+	L1MEa	LINE	L1	507	1358	-5275	1
chr15	76034165	76034166	chunk0070_353_1	4.5547	AR_DHT_Control	chr15	76034005	76034526	-25956663	-	MLT1L-int	LTR	ERVL-MaLR	-29	1358	811	1
chr15	76111839	76111840	chunk0070_356_1	25.2499	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	76111708	76112474	-25878715	+	L1MC2	LINE	L1	5575	6338	-6	1
chr15	76149780	76149781	chunk0070_360_1	135.2528	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	76149717	76149844	-25841345	+	MIR	SINE	MIR	123	256	-6	1
chr15	76164111	76164112	chunk0070_362_1	29.82778	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	76163887	76164199	-25826990	-	L1MB5	LINE	L1	-9	6165	5838	1
chr15	76388052	76388053	chunk0070_376_1	62.79893	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	76387761	76388309	-25602880	+	L3	LINE	CR1	3303	3903	-196	1
chr15	76477476	76477477	chunk0070_378_1	9.19742	AR_DHT_Control	chr15	76477464	76477885	-25513304	-	L1M5	LINE	L1	-437	5687	5254	1
chr15	76533275	76533276	chunk0070_379_1	30.5187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	76533268	76533625	-25457564	+	Tigger3a	DNA	TcMar-Tigger	4	348	0	1
chr15	76552901	76552902	chunk0070_380_1	4.44156	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	76552311	76554785	-25436404	+	L1PA15	LINE	L1	1388	3832	-4323	1
chr15	76572806	76572807	chunk0070_382_1	225.74579	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	76572625	76572811	-25418378	+	MER5A	DNA	hAT-Charlie	1	182	-7	1
chr15	76655905	76655906	chunk0070_384_1	63.7001	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	76654832	76659277	-25331912	+	L1PA15	LINE	L1	1426	5863	-810	1
chr15	76768943	76768944	chunk0070_387_1	8.91027	AR_DHT_Control	chr15	76768811	76768960	-25222229	+	L1M5	LINE	L1	5638	5786	-378	1
chr15	76768943	76768944	chunk0070_387_1	8.91027	AR_DHT_Control	chr15	76768932	76769055	-25222134	+	L1ME1	LINE	L1	5845	5946	-238	1
chr15	76799890	76799891	chunk0070_390_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	76799599	76799989	-25191200	+	MER70A	LTR	ERVL	23	432	-40	1
chr15	76887863	76887864	chunk0070_391_1	18.8046	AR_DHT_Control	chr15	76887180	76893336	-25097853	+	L1PA6	LINE	L1	1	6152	-2	1
chr15	76963241	76963242	chunk0070_392_1	11.5325	AR_DHT_Control	chr15	76963156	76963352	-25027837	+	MIR	SINE	MIR	63	262	0	1
chr15	77001750	77001751	chunk0070_393_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	77001627	77001984	-24989205	+	L1ME4b	LINE	L1	552	892	0	1
chr15	77058687	77058688	chunk0070_394_1	28.28515	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	77058288	77058697	-24932492	+	L2c	LINE	L2	2933	3379	-8	1
chr15	77425168	77425169	chunk0070_404_1	4.96282	AR_DHT_Control	chr15	77424998	77425355	-24565834	+	L2b	LINE	L2	3042	3416	-10	1
chr15	77441345	77441346	chunk0070_405_1	24.84749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	77441279	77441468	-24549721	+	Charlie22a	DNA	hAT-Charlie	234	426	-65	1
chr15	77885659	77885660	chunk0070_422_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	77885433	77886029	-24105160	+	(CA)n	Simple_repeat	Simple_repeat	1	597	0	1
chr15	77955360	77955361	chunk0070_424_1	8.27376	AR_DHT_Control	chr15	77955306	77955407	-24035782	+	L1MD2	LINE	L1	5842	5934	-425	1
chr15	78032231	78032232	chunk0070_429_1	9.02033	AR_DHT_Control	chr15	78031684	78033085	-23958104	+	L1MEc	LINE	L1	3	1452	-4948	1
chr15	78041939	78041940	chunk0070_430_1	7.27655	AR_DHT_Control	chr15	78041834	78042067	-23949122	-	MIR	SINE	MIR	-3	259	4	1
chr15	78060167	78060168	chunk0070_432_1	19.45672	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	78060147	78060253	-23930936	-	L2a	LINE	L2	-10	3416	3288	1
chr15	78221733	78221734	chunk0070_441_1	29.8506	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	78221051	78222039	-23769150	-	LTR5B	LTR	ERVK	0	1002	1	1
chr15	78261221	78261222	chunk0070_442_1	32.28886	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	78261074	78261497	-23729692	-	MER67A	LTR	ERV1	0	543	140	1
chr15	78387853	78387854	chunk0070_445_1	7.34658	AR_DHT_Control	chr15	78387810	78387951	-23603238	-	MER5A1	DNA	hAT-Charlie	-5	161	2	1
chr15	78429649	78429650	chunk0070_448_1	121.3151	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	78429579	78430125	-23561064	-	L2c	LINE	L2	0	3387	2792	1
chr15	78449448	78449449	chunk0070_450_1	54.548	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	78449386	78449670	-23541519	-	MER102a	DNA	hAT-Charlie	0	330	1	1
chr15	78456086	78456087	chunk0070_452_1	22.44223	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	78455788	78456214	-23534975	-	MLT1F	LTR	ERVL-MaLR	-2	546	1	1
chr15	78457077	78457078	chunk0070_455_1	27.9726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	78456988	78457784	-23533405	-	HAL1	LINE	L1	-329	2178	1412	1
chr15	78696593	78696594	chunk0071_5_1	29.32291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	78696326	78696727	-23294462	-	L1MA2	LINE	L1	-64	6240	5831	1
chr15	78707793	78707794	chunk0071_6_1	24.9293	AR_DHT_Control	chr15	78707564	78707909	-23283280	+	L1ME3	LINE	L1	5794	6149	-13	1
chr15	78864606	78864607	chunk0071_7_1	106.9288	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	78864415	78864683	-23126506	+	L1MC5a	LINE	L1	2020	2306	-471	1
chr15	78914663	78914664	chunk0071_12_1	8.16452	AR_DHT_Control	chr15	78914619	78914708	-23076481	+	MER81	DNA	hAT-Blackjack	27	111	-3	1
chr15	79098009	79098010	chunk0071_25_1	10.6105	AR_DHT_Control	chr15	79097706	79098326	-22892863	-	L1MC	LINE	L1	-1112	5034	4410	1
chr15	79582591	79582592	chunk0071_31_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	79581490	79584746	-22406443	-	L1MB2	LINE	L1	-24	6147	2884	1
chr15	79656520	79656521	chunk0071_32_1	5.40567	AR_DHT_Control	chr15	79656492	79656563	-22334626	+	MLT1J	LTR	ERVL-MaLR	10	76	-534	1
chr15	79657965	79657966	chunk0071_33_1	9.54045	AR_DHT_Control	chr15	79657565	79657986	-22333203	+	MER89	LTR	ERV1	1	559	0	1
chr15	79706804	79706805	chunk0071_34_1	8.27376	AR_DHT_Control	chr15	79705586	79709298	-22281891	-	L1MA4	LINE	L1	0	6300	2588	1
chr15	79823423	79823424	chunk0071_38_1	26.051	AR_DHT_Control	chr15	79823408	79823549	-22167640	+	MIRb	SINE	MIR	15	153	-115	1
chr15	79902283	79902284	chunk0071_43_1	20.3645	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	79902117	79902896	-22088293	-	L2a	LINE	L2	-1	3425	2553	1
chr15	79935972	79935973	chunk0071_47_1	12.546	AR_DHT_Control	chr15	79935247	79936240	-22054949	-	LTR5B	LTR	ERVK	0	1002	2	1
chr15	79993917	79993918	chunk0071_48_1	5.46037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	79993797	79994095	-21997094	-	L2b	LINE	L2	-26	3349	3024	1
chr15	80022539	80022540	chunk0071_49_1	8.27376	AR_DHT_Control	chr15	80022369	80022787	-21968402	-	LTR33	LTR	ERVL	-39	476	30	1
chr15	80105423	80105424	chunk0071_53_1	20.38949	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	80105323	80105524	-21885665	-	MamRTE1	LINE	RTE-BovB	-20	3792	3562	1
chr15	80197380	80197381	chunk0071_55_1	11.5247	AR_DHT_Control	chr15	80197364	80197496	-21793693	+	LTR33	LTR	ERVL	377	507	-8	1
chr15	80252786	80252787	chunk0071_57_1	9.68961	AR_DHT_Control	chr15	80252670	80253190	-21737999	+	L1ME4a	LINE	L1	4179	4738	-1408	1
chr15	80326785	80326786	chunk0071_59_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	80326671	80326998	-21664191	+	MamGypLTR1c	LTR	Gypsy	128	527	-255	1
chr15	80476417	80476418	chunk0071_62_1	17.8083	AR_DHT_Control	chr15	80475905	80476479	-21514710	-	Tigger9b	DNA	TcMar-Tigger	-1	623	10	1
chr15	80520996	80520997	chunk0071_65_1	31.8432	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	80520816	80521322	-21469867	+	MER75	DNA	PiggyBac	1	514	0	1
chr15	80535923	80535924	chunk0071_68_1	48.304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	80535883	80535925	-21455264	+	(TGTTGTT)n	Simple_repeat	Simple_repeat	1	44	0	1
chr15	80768179	80768180	chunk0071_83_1	15.0078	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	80768145	80768323	-21222866	+	MIR	SINE	MIR	45	261	-1	1
chr15	80961646	80961647	chunk0071_95_1	9.21264	AR_DHT_Control	chr15	80961238	80961740	-21029449	+	L1M5	LINE	L1	5267	5776	-348	1
chr15	80991273	80991274	chunk0071_97_1	8.46955	AR_DHT_Control	chr15	80990935	80991424	-20999765	-	MLT1J	LTR	ERVL-MaLR	-9	503	16	1
chr15	81008684	81008685	chunk0071_100_1	20.55138	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	81008598	81008693	-20982496	-	MIRc	SINE	MIR	-15	253	154	1
chr15	81013796	81013797	chunk0071_101_1	11.6192	AR_DHT_Control	chr15	81013791	81014003	-20977186	+	L2c	LINE	L2	3172	3384	-3	1
chr15	81062636	81062637	chunk0071_104_1	7.62275	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	81062566	81062678	-20928511	+	MER5B	DNA	hAT-Charlie	67	178	0	1
chr15	81127288	81127289	chunk0071_108_1	6.48643	AR_DHT_Control	chr15	81126168	81127721	-20863468	-	MER65-int	LTR	ERV1	-3171	1700	85	1
chr15	81404927	81404928	chunk0071_120_1	192.1011	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	81404478	81405115	-20586074	+	L1MC3	LINE	L1	6441	7103	-682	1
chr15	81454392	81454393	chunk0071_122_1	13.7636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	81453606	81454510	-20536679	-	L1PB4	LINE	L1	0	7269	6153	1
chr15	81499376	81499377	chunk0071_125_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	81499364	81499699	-20491490	+	LTR78	LTR	ERV1	907	1219	-85	1
chr15	81549933	81549934	chunk0071_126_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	81549773	81550162	-20441027	+	L1ME3G	LINE	L1	504	904	-20	1
chr15	81621979	81621980	chunk0071_127_1	4.83532	AR_DHT_Control	chr15	81621867	81622394	-20368795	-	L1MC3	LINE	L1	-2091	5694	5144	1
chr15	81856794	81856795	chunk0071_132_1	52.6213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	81856651	81856846	-20134343	+	L2b	LINE	L2	3179	3375	0	1
chr15	82196085	82196086	chunk0071_136_1	11.1716	AR_DHT_Control	chr15	82195834	82196149	-19795040	-	L2a	LINE	L2	-65	3322	2950	1
chr15	82487254	82487255	chunk0071_142_1	21.52394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	82487062	82487491	-19503698	+	LTR10B1	LTR	ERV1	1	533	-14	1
chr15	82865210	82865211	chunk0071_147_1	5.50529	AR_DHT_Control	chr15	82864866	82865286	-19125903	+	Tigger10	DNA	TcMar-Tigger	449	898	-946	1
chr15	82900617	82900618	chunk0071_153_1	87	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	82900370	82900649	-19090540	+	L1M5	LINE	L1	4517	4832	-1314	1
chr15	82978502	82978503	chunk0071_160_1	13.6789	AR_DHT_Control	chr15	82978190	82978576	-19012613	-	L2c	LINE	L2	-10	3377	2964	1
chr15	83011199	83011200	chunk0071_164_1	6.93299	AR_DHT_Control	chr15	83010832	83011235	-18979954	-	L2c	LINE	L2	-36	3351	2927	1
chr15	83295621	83295622	chunk0071_174_1	42.61332	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	83295479	83295950	-18695239	+	MLT1H2	LTR	ERVL-MaLR	34	489	0	1
chr15	83339397	83339398	chunk0071_177_1	16.1532	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	83339392	83339466	-18651723	+	Tigger5b	DNA	TcMar-Tigger	1	78	-394	1
chr15	83447404	83447405	chunk0071_180_1	17.693	AR_DHT_Control	chr15	83447374	83447409	-18543780	+	(TGTGGC)n	Simple_repeat	Simple_repeat	1	35	0	1
chr15	83857471	83857472	chunk0071_191_1	13.2067	AR_DHT_Control	chr15	83857398	83857575	-18133614	-	L1ME3G	LINE	L1	-327	597	482	1
chr15	83918281	83918282	chunk0071_194_1	44.8208	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	83918263	83919404	-18071785	-	L2a	LINE	L2	-13	3413	2118	1
chr15	83918763	83918764	chunk0071_196_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	83918263	83919404	-18071785	-	L2a	LINE	L2	-13	3413	2118	1
chr15	83991481	83991482	chunk0071_202_1	15.14134	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	83991314	83991583	-17999606	-	MamRep605	LTR?	LTR?	-135	714	438	1
chr15	84001508	84001509	chunk0071_204_1	55.94936	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	84001409	84001548	-17989641	-	MIRb	SINE	MIR	-87	181	37	1
chr15	84022707	84022708	chunk0071_207_1	21.94734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	84022620	84022715	-17968474	+	L2a	LINE	L2	3329	3426	0	1
chr15	84032765	84032766	chunk0071_208_1	18.76756	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	84032575	84033050	-17958139	-	L1ME3G	LINE	L1	-254	670	149	1
chr15	84789462	84789463	chunk0071_219_1	26.4596	AR_DHT_Control	chr15	84789258	84789642	-17201547	-	L1MB2	LINE	L1	-353	5818	5445	1
chr15	84811001	84811002	chunk0071_220_1	5.10868	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	84810701	84811214	-17179975	+	L3	LINE	CR1	3450	4054	-45	1
chr15	84845065	84845066	chunk0071_223_1	111.9569	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	84844951	84845776	-17145413	+	L1MEf	LINE	L1	26	912	-5635	1
chr15	84855467	84855468	chunk0071_225_1	148.9452	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	84855336	84855558	-17135631	-	L1M7	LINE	L1	-5996	222	5	1
chr15	84861175	84861176	chunk0071_227_1	16.42296	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	84861048	84862189	-17129000	-	L1MC5a	LINE	L1	-268	2509	1374	1
chr15	84937237	84937238	chunk0071_228_1	9.13774	AR_DHT_Control	chr15	84937180	84937342	-17053847	-	L1ME4c	LINE	L1	-290	540	374	1
chr15	85016598	85016599	chunk0071_229_1	7.36432	AR_DHT_Control	chr15	85016169	85016979	-16974210	-	L1MC5	LINE	L1	-973	5173	4333	1
chr15	85165317	85165318	chunk0071_236_1	15.25507	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	85164294	85165402	-16825787	+	MER11A	LTR	ERVK	1	1266	0	1
chr15	85165931	85165932	chunk0071_237_1	4.29711	AR_DHT_Control	chr15	85165884	85165977	-16825212	+	L1M4	LINE	L1	4456	4542	-1604	1
chr15	85293484	85293485	chunk0071_240_1	147.62115	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	85293398	85293625	-16697564	-	L2c	LINE	L2	-30	3357	3112	1
chr15	85405624	85405625	chunk0071_250_1	29.99289	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85405521	85405718	-16585471	-	MIRb	SINE	MIR	-15	253	17	1
chr15	85477932	85477933	chunk0071_255_1	10.1214	AR_DHT_Control	chr15	85477893	85478235	-16512954	+	L2c	LINE	L2	2993	3370	-17	1
chr15	85486204	85486205	chunk0071_257_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85486194	85486605	-16504584	-	L1M4	LINE	L1	-924	5222	4796	1
chr15	85514509	85514510	chunk0071_260_1	10.5451	AR_DHT_Control	chr15	85513708	85514600	-16476589	-	L1MC4	LINE	L1	-400	7642	6746	1
chr15	85520857	85520858	chunk0071_261_1	10.5973	AR_DHT_Control	chr15	85520752	85520885	-16470304	-	Tigger3c	DNA	TcMar-Tigger	0	602	473	1
chr15	85528562	85528563	chunk0071_263_1	38.93	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	85528458	85528661	-16462528	-	MIRb	SINE	MIR	0	268	44	1
chr15	85638260	85638261	chunk0071_271_1	9.44294	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85638178	85638571	-16352618	-	L1ME1	LINE	L1	-3272	2874	2539	1
chr15	85649113	85649114	chunk0071_273_1	15.78895	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	85649081	85649316	-16341873	-	MIRb	SINE	MIR	-6	262	16	1
chr15	85805715	85805716	chunk0071_283_1	19.14928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	85805628	85805871	-16185318	+	L1MD1	LINE	L1	511	698	-226	1
chr15	85819865	85819866	chunk0071_287_1	80.45324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	85819747	85820135	-16171054	-	L1MC5a	LINE	L1	-2067	710	293	1
chr15	85837275	85837276	chunk0071_289_1	26.73851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85837159	85837307	-16153882	-	MIRb	SINE	MIR	-58	210	57	1
chr15	85919155	85919156	chunk0071_295_1	25.3024	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	85919127	85919250	-16071939	+	MIRb	SINE	MIR	41	157	-111	1
chr15	85926378	85926379	chunk0071_298_1	23.46563	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	85926232	85926476	-16064713	+	L2	LINE	L2	807	1059	-2360	1
chr15	86094952	86094953	chunk0071_301_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	86094758	86095633	-15895556	-	MER21C	LTR	ERVL	-36	902	1	1
chr15	86101517	86101518	chunk0071_302_1	39.4439	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	86099807	86102040	-15889149	-	L1MA4A	LINE	L1	-1970	5592	3414	1
chr15	86179776	86179777	chunk0071_308_1	32.1426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	86179281	86181689	-15809500	+	L1ME1	LINE	L1	3702	6162	-17	1
chr15	86180690	86180691	chunk0071_310_1	43.3856	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	86179281	86181689	-15809500	+	L1ME1	LINE	L1	3702	6162	-17	1
chr15	86217176	86217177	chunk0071_312_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	86216668	86217304	-15773885	+	L2a	LINE	L2	2725	3426	0	1
chr15	86544177	86544178	chunk0071_315_1	4.83532	AR_DHT_Control	chr15	86544097	86544425	-15446764	-	MLT1H	LTR	ERVL-MaLR	-5	544	135	1
chr15	86796809	86796810	chunk0071_319_1	10.9353	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	86796638	86796847	-15194342	+	MER58A	DNA	hAT-Charlie	6	224	0	1
chr15	87104674	87104675	chunk0071_328_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	87103906	87109067	-14882122	+	L1MA4A	LINE	L1	718	6166	-1396	1
chr15	87115681	87115682	chunk0071_330_1	26.3189	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	87115330	87116134	-14875055	+	L1MC3	LINE	L1	6782	7613	-172	1
chr15	87565249	87565250	chunk0071_331_1	8.08101	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	87565246	87565484	-14425705	+	MIR	SINE	MIR	1	238	-24	1
chr15	88004587	88004588	chunk0071_340_1	30.085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	88004227	88004636	-13986553	+	CR1_Mam	LINE	CR1	1483	1904	-300	1
chr15	88316847	88316848	chunk0071_345_1	18.25503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	88316403	88317094	-13674095	+	L1ME1	LINE	L1	5308	6045	-134	1
chr15	88394985	88394986	chunk0071_347_1	61.3848	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	88394850	88395188	-13596001	-	MER58B	DNA	hAT-Charlie	-6	335	1	1
chr15	88631617	88631618	chunk0071_353_1	184.1289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	88631436	88631649	-13359540	+	MIRb	SINE	MIR	40	262	0	1
chr15	88763261	88763262	chunk0071_358_1	36.69019	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	88762996	88763290	-13227899	-	AluSx1	SINE	Alu	-10	302	1	1
chr15	88905422	88905423	chunk0071_360_1	8.81034	AR_DHT_Control	chr15	88905321	88905436	-13085753	-	L2a	LINE	L2	0	3426	3308	1
chr15	88930938	88930939	chunk0071_361_1	9.21264	AR_DHT_Control	chr15	88930938	88931243	-13059946	+	L1ME3A	LINE	L1	5860	6166	-7	1
chr15	89121481	89121482	chunk0071_377_1	118.6948	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	89121463	89121576	-12869613	-	L1ME3	LINE	L1	-266	6178	6064	1
chr15	89125633	89125634	chunk0071_379_1	41.17888	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	89125593	89125692	-12865497	-	MER81	DNA	hAT-Blackjack	-2	112	2	1
chr15	89162873	89162874	chunk0071_387_1	7.22247	AR_DHT_Control	chr15	89162574	89162938	-12828251	+	L2a	LINE	L2	3060	3419	-7	1
chr15	89379998	89379999	chunk0071_399_1	27.10036	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	89379950	89380013	-12611176	-	MIRb	SINE	MIR	-176	92	28	1
chr15	89576481	89576482	chunk0071_403_1	14.2268	AR_DHT_Control	chr15	89576436	89576634	-12414555	+	L2c	LINE	L2	2910	3121	-266	1
chr15	89590401	89590402	chunk0071_404_1	48.5932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	89590296	89590423	-12400766	-	Tigger9a	DNA	TcMar-Tigger	-596	136	1	1
chr15	89707771	89707772	chunk0071_413_1	15.02424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	89707550	89708288	-12282901	+	L1ME1	LINE	L1	5470	6179	0	1
chr15	89739295	89739296	chunk0071_417_1	13.7349	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	89739166	89739383	-12251806	+	MER58A	DNA	hAT-Charlie	3	224	0	1
chr15	89773185	89773186	chunk0071_422_1	171.5222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	89773014	89773372	-12217817	+	L1ME3G	LINE	L1	560	924	0	1
chr15	89911139	89911140	chunk0071_436_1	6.21736	AR_DHT_Control	chr15	89911006	89911208	-12079981	+	MIRc	SINE	MIR	41	268	0	1
chr15	89940421	89940422	chunk0071_437_1	9.13774	AR_DHT_Control	chr15	89940023	89940442	-12050747	+	L1MA8	LINE	L1	5847	6291	0	1
chr15	89999143	89999144	chunk0071_440_1	16.1526	AR_DHT_Control	chr15	89998992	89999393	-11991796	+	L2c	LINE	L2	2936	3384	-3	1
chr15	90138662	90138663	chunk0071_446_1	39.28367	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	90138640	90138765	-11852424	+	L3	LINE	CR1	92	222	-3877	1
chr15	90149590	90149591	chunk0071_448_1	58.61585	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	90149542	90149653	-11841536	-	Tigger12	DNA	TcMar-Tigger	-1906	569	457	1
chr15	90397404	90397405	chunk0071_461_1	7.97093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	90397381	90397509	-11593680	+	MIRb	SINE	MIR	102	252	-16	1
chr15	90422434	90422435	chunk0072_67_1	46.9191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	90422344	90422574	-11568615	+	L1ME4c	LINE	L1	354	607	-223	1
chr15	90514875	90514876	chunk0072_75_1	34.91659	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	90514756	90515117	-11476072	+	L1MC4	LINE	L1	7335	7708	-334	1
chr15	90556459	90556460	chunk0072_78_1	4.24079	AR_DHT_Control	chr15	90556441	90556580	-11434609	+	Tigger12	DNA	TcMar-Tigger	2	137	-2338	1
chr15	90624443	90624444	chunk0072_83_1	13.1346	AR_DHT_Control	chr15	90624440	90624492	-11366697	+	(TCCC)n	Simple_repeat	Simple_repeat	1	52	0	1
chr15	91030246	91030247	chunk0072_95_1	8.24382	AR_DHT_Control	chr15	91030209	91030295	-10960894	+	MIRb	SINE	MIR	19	106	-162	1
chr15	91042083	91042084	chunk0072_97_1	326.7168	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	91041969	91042085	-10949104	+	L1MA6	LINE	L1	6165	6290	-10	1
chr15	91080127	91080128	chunk0072_100_1	33.6328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	91079160	91080521	-10910668	-	L1MC1	LINE	L1	-4575	1933	502	1
chr15	91217292	91217293	chunk0072_104_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	91217196	91217395	-10773794	-	L2c	LINE	L2	-5	3382	3195	1
chr15	91261471	91261472	chunk0072_106_1	27.5198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	91261334	91261763	-10729426	-	L1ME4c	LINE	L1	-202	628	208	1
chr15	91380105	91380106	chunk0072_110_1	7.58612	AR_DHT_Control	chr15	91379509	91381496	-10609693	-	L1MC1	LINE	L1	-1	6332	4401	1
chr15	91472599	91472600	chunk0072_111_1	25.213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	91472242	91473021	-10518168	-	L1MB8	LINE	L1	-33	6543	5698	1
chr15	92503994	92503995	chunk0072_120_1	7.82111	AR_DHT_Control	chr15	92503965	92504109	-9487080	-	LTR79	LTR	ERVL	-160	367	223	1
chr15	92600973	92600974	chunk0072_124_1	14.6511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92600828	92600976	-9390213	-	L2c	LINE	L2	-5	3382	3243	1
chr15	92696353	92696354	chunk0072_141_1	101.1877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr15	92696333	92696476	-9294713	-	MER112	DNA	hAT-Charlie	-99	162	1	1
chr15	92770831	92770832	chunk0072_148_1	43.91116	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92770701	92770924	-9220265	-	MER87	LTR	ERV1	-158	383	164	1
chr15	92805261	92805262	chunk0072_151_1	29.5553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92805211	92805308	-9185881	-	MIRb	SINE	MIR	-15	253	153	1
chr15	92840512	92840513	chunk0072_154_1	8.41215	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	92840457	92840534	-9150655	+	MIRb	SINE	MIR	140	214	-54	1
chr15	92882810	92882811	chunk0072_157_1	4.76708	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92882777	92882821	-9108368	+	GA-rich	Low_complexity	Low_complexity	1	45	0	1
chr15	92915024	92915025	chunk0072_161_1	4.44156	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	92914710	92915111	-9076078	-	LTR54B	LTR	ERV1	-2	496	1	1
chr15	93021261	93021262	chunk0072_162_1	20.2153	AR_DHT_Control	chr15	93021026	93022096	-8969093	-	L1MEc	LINE	L1	-608	2144	593	1
chr15	93201975	93201976	chunk0072_168_1	41.7008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	93201922	93202209	-8788980	+	MLT1K	LTR	ERVL-MaLR	161	478	-117	1
chr15	93356590	93356591	chunk0072_170_1	6.77976	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	93356586	93356684	-8634505	+	(ACACAT)n	Simple_repeat	Simple_repeat	1	96	0	1
chr15	93524482	93524483	chunk0072_172_1	53.66973	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	93524280	93524499	-8466690	+	MIRb	SINE	MIR	1	236	-32	1
chr15	93784098	93784099	chunk0072_175_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	93783992	93784377	-8206812	-	L2c	LINE	L2	-25	3362	2913	1
chr15	94293897	94293898	chunk0072_194_1	9.28153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	94293670	94294320	-7696869	+	L1ME1	LINE	L1	5450	6119	-60	1
chr15	94485659	94485660	chunk0072_198_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	94484459	94487217	-7503972	+	L1MA4A	LINE	L1	67	2941	-3909	1
chr15	94789597	94789598	chunk0072_201_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	94789454	94789695	-7201494	+	MIRb	SINE	MIR	17	268	0	1
chr15	95563722	95563723	chunk0072_213_1	12.82127	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	95563596	95563749	-6427440	+	MIR	SINE	MIR	5	167	-95	1
chr15	95653317	95653318	chunk0072_218_1	8.58634	AR_DHT_Control	chr15	95653185	95653456	-6337733	+	L2b	LINE	L2	3071	3346	-41	1
chr15	95680073	95680074	chunk0072_220_1	238.6562	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	95679931	95680212	-6310977	+	L1MC2	LINE	L1	6027	6323	-21	1
chr15	95976676	95976677	chunk0072_241_1	15.0847	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	95976646	95976728	-6014461	+	MIR3	SINE	MIR	87	174	-34	1
chr15	96260014	96260015	chunk0072_259_1	8.64577	AR_DHT_Control	chr15	96259839	96260216	-5730973	+	L1ME3G	LINE	L1	316	655	-269	1
chr15	96641375	96641376	chunk0072_265_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	96641209	96641452	-5349737	+	MARNA	DNA	TcMar-Mariner	27	286	-300	1
chr15	96723923	96723924	chunk0072_268_1	8.86298	AR_DHT_Control	chr15	96723903	96724115	-5267074	+	MER58A	DNA	hAT-Charlie	7	224	0	1
chr15	97984281	97984282	chunk0072_278_1	12.73694	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	97984269	97984384	-4006805	+	MIRc	SINE	MIR	45	160	-102	1
chr15	98256631	98256632	chunk0072_283_1	10.1791	AR_DHT_Control	chr15	98256620	98256789	-3734400	-	MIRb	SINE	MIR	-34	234	34	1
chr15	98796844	98796845	chunk0072_311_1	9.77239	AR_DHT_Control	chr15	98796652	98796875	-3194314	+	L2a	LINE	L2	3226	3423	-3	1
chr15	98803929	98803930	chunk0072_314_1	323.4656	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	98803805	98804131	-3187058	-	Tigger3b	DNA	TcMar-Tigger	-882	349	1	1
chr15	98868780	98868781	chunk0072_316_1	5.10868	AR_DHT_Control	chr15	98868574	98868819	-3122370	+	MIR	SINE	MIR	5	257	-5	1
chr15	98908001	98908002	chunk0072_318_1	43.7033	AR_DHT_Control	chr15	98907872	98908036	-3083153	+	MER5A	DNA	hAT-Charlie	4	189	0	1
chr15	99143781	99143782	chunk0072_328_1	15.21527	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	99143754	99143889	-2847300	+	L2b	LINE	L2	3237	3375	0	1
chr15	99228103	99228104	chunk0072_333_1	69.25678	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	99227153	99228115	-2763074	+	L2c	LINE	L2	2453	3386	-1	1
chr15	99294574	99294575	chunk0072_338_1	6.48643	AR_DHT_Control	chr15	99294457	99294809	-2696380	-	MLT1A0	LTR	ERVL-MaLR	0	365	1	1
chr15	99491013	99491014	chunk0072_342_1	21.1215	AR_DHT_Control	chr15	99491000	99491151	-2500038	-	L1MEg	LINE	L1	-6295	157	1	1
chr15	99572577	99572578	chunk0072_346_1	25.4719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	99571594	99572612	-2418577	+	L2a	LINE	L2	2326	3415	-11	1
chr15	99589923	99589924	chunk0072_349_1	154.4149	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	99588742	99592187	-2399002	-	L1ME2	LINE	L1	-1	6516	641	1
chr15	99620598	99620599	chunk0072_351_1	6.58746	AR_DHT_Control	chr15	99620186	99620843	-2370346	-	L1PA16	LINE	L1	-2	6164	5495	1
chr15	99760299	99760300	chunk0072_356_1	49.6766	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	99760260	99760458	-2230731	+	MIR	SINE	MIR	19	236	-26	1
chr15	99772527	99772528	chunk0072_362_1	56.0218	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	99772512	99772556	-2218633	-	L2a	LINE	L2	-26	3400	3358	1
chr15	99853126	99853127	chunk0072_363_1	49.5168	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	99852968	99854809	-2136380	-	L1MC3	LINE	L1	-1904	5881	3992	1
chr15	99857245	99857246	chunk0072_365_1	8.80199	SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	99857180	99857316	-2133873	-	MIRb	SINE	MIR	-117	151	18	1
chr15	99943666	99943667	chunk0072_368_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	99942896	99944856	-2046333	-	L1MA9	LINE	L1	-5159	2407	400	1
chr15	100350846	100350847	chunk0072_382_1	17.568	AR_DHT_Control	chr15	100350744	100351516	-1639673	-	Tigger3	DNA	TcMar-Tigger	0	3029	2221	1
chr15	100517223	100517224	chunk0072_389_1	79.10561	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr15	100517069	100517264	-1473925	+	MIRb	SINE	MIR	35	250	-18	1
chr15	100760612	100760613	chunk0072_402_1	32.3365	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	100760429	100760613	-1230576	+	MER91B	DNA	hAT-Tip100	1	177	-13	1
chr15	100925658	100925659	chunk0072_413_1	7.63168	AR_DHT_Control	chr15	100925648	100925704	-1065485	-	L2c	LINE	L2	-6	3381	3325	1
chr15	100925658	100925659	chunk0072_413_1	7.63168	AR_DHT_Control	chr15	100925654	100925908	-1065281	-	MIR	SINE	MIR	-7	255	1	1
chr15	100933979	100933980	chunk0072_414_1	18.03634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	100933851	100934055	-1057134	-	HAL1ME	LINE	L1	-1272	1193	984	1
chr15	100940809	100940810	chunk0072_416_1	4.67225	AR_DHT_Control	chr15	100940695	100940841	-1050348	+	LTR86A1	LTR	ERVL	1	148	-360	1
chr15	100968211	100968212	chunk0072_418_1	44.3978	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr15	100967644	100968675	-1022514	-	L1ME2z	LINE	L1	-3	6441	5316	1
chr15	100986675	100986676	chunk0072_419_1	9.25272	AR_DHT_Control	chr15	100986493	100986911	-1004278	-	LTR22A	LTR	ERVK	0	458	1	1
chr15	100997617	100997618	chunk0072_420_1	8.4957	AR_DHT_Control	chr15	100997471	100997897	-993292	+	L1ME4c	LINE	L1	84	499	-331	1
chr15	101037582	101037583	chunk0072_424_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	101035132	101037808	-953381	-	L1MA4A	LINE	L1	-3464	4098	1147	1
chr15	101209072	101209073	chunk0072_429_1	81.84699	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	101208728	101209379	-781810	+	L1MC4	LINE	L1	6947	7627	-415	1
chr15	101217767	101217768	chunk0072_432_1	10.3855	AR_DHT_Control	chr15	101216177	101218277	-772912	+	L1MC3	LINE	L1	5427	7609	-176	1
chr15	101639851	101639852	chunk0072_444_1	36.78878	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr15	101639847	101639899	-351290	-	L2a	LINE	L2	-3	3423	3368	1
chr15	101717383	101717384	chunk0072_450_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr15	101717259	101717401	-273788	+	MIRb	SINE	MIR	92	262	0	1
chr15	101857651	101857652	chunk0072_457_1	12.1886	AR_DHT_Control	chr15	101857540	101858050	-133139	+	MER101-int	LTR	ERV1	2758	3266	-3373	1
chr15	101904027	101904028	chunk0072_458_1	12.1886	AR_DHT_Control	chr15	101903940	101904290	-86899	+	L2c	LINE	L2	2980	3403	-23	1
chr16	45686	45687	chunk0072_1_1	21.5224	AR_DHT_Control	chr16	44714	46385	-90291960	+	HERV3-int	LTR	ERV1	4208	5864	-2562	1
chr16	335419	335420	chunk0072_8_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	335351	335708	-90002637	+	(ACACAGC)n	Simple_repeat	Simple_repeat	1	359	0	1
chr16	383623	383624	chunk0072_10_1	14.7375	AR_DHT_Control	chr16	383570	383824	-89954521	+	L1ME4b	LINE	L1	572	848	-44	1
chr16	388612	388613	chunk0072_11_1	82.9913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	387823	388797	-89949548	-	LTR5B	LTR	ERVK	0	1002	1	1
chr16	509300	509301	chunk0072_22_1	82.76629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	509190	509524	-89828821	-	HAL1	LINE	L1	-1400	1107	751	1
chr16	562491	562492	chunk0072_24_1	4.67092	AR_DHT_Control	chr16	562411	562643	-89775702	+	(AC)n	Simple_repeat	Simple_repeat	1	233	0	1
chr16	959835	959836	chunk0072_39_1	71.93177	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	958916	960196	-89378149	+	L1MC3	LINE	L1	5482	6826	-959	1
chr16	1200040	1200041	chunk0072_46_1	5.91555	AR_DHT_Control	chr16	1200035	1200220	-89138125	+	(TGACCC)n	Simple_repeat	Simple_repeat	1	189	0	1
chr16	1238158	1238159	chunk0072_47_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	1238011	1238372	-89099973	+	(GT)n	Simple_repeat	Simple_repeat	1	364	0	1
chr16	1297508	1297509	chunk0072_50_1	21.85851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	1297388	1297516	-89040829	+	MER4D	LTR	ERV1	740	872	0	1
chr16	1421250	1421251	chunk0072_52_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	1421168	1421273	-88917072	-	AluJb	SINE	Alu	0	312	216	1
chr16	1631109	1631110	chunk0072_57_1	369.1216	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	1630613	1631533	-88706812	-	L1MC4	LINE	L1	-356	7686	6746	1
chr16	1646205	1646206	chunk0072_61_1	188.52886	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	1645835	1646988	-88691357	-	L1MC3	LINE	L1	-1671	6114	4808	1
chr16	1685958	1685959	chunk0073_2_1	9.72299	AR_DHT_Control	chr16	1685886	1686001	-88652344	+	Charlie4z	DNA	hAT-Charlie	44	161	-6	1
chr16	1935482	1935483	chunk0073_6_1	27.05125	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	1935410	1936026	-88402319	-	ERVL-B4-int	LTR	ERVL	-4070	1644	1012	1
chr16	2260456	2260457	chunk0073_22_1	7.73888	AR_DHT_Control	chr16	2260398	2260848	-88077497	+	PABL_A-int	LTR	ERV1	3961	4409	-1177	1
chr16	2800118	2800119	chunk0073_39_1	25.38109	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	2799975	2800278	-87538067	-	Tigger3	DNA	TcMar-Tigger	0	3029	2740	1
chr16	2861683	2861684	chunk0073_42_1	16.2816	AR_DHT_Control	chr16	2861443	2861816	-87476529	+	L1PB4	LINE	L1	5552	5913	-243	1
chr16	2928481	2928482	chunk0073_44_1	12.0334	AR_DHT_Control	chr16	2927738	2928722	-87409623	-	LTR5B	LTR	ERVK	0	1002	1	1
chr16	2977589	2977590	chunk0073_48_1	18.8142	AR_DHT_Control	chr16	2977506	2978465	-87359880	+	L1M4b	LINE	L1	8	986	-5881	1
chr16	3031787	3031788	chunk0073_50_1	35.13498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	3031777	3031910	-87306435	-	MIRb	SINE	MIR	-39	229	85	1
chr16	3039175	3039176	chunk0073_51_1	5.51262	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	3039120	3039299	-87299046	+	MIR	SINE	MIR	1	175	-87	1
chr16	3129632	3129633	chunk0073_52_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	3129169	3129828	-87208517	-	LTR41	LTR	ERVL	-96	672	2	1
chr16	3343025	3343026	chunk0073_56_1	8.27376	AR_DHT_Control	chr16	3342895	3343259	-86995086	+	L1MD2	LINE	L1	5820	6178	-181	1
chr16	3479815	3479816	chunk0073_61_1	5.20246	AR_DHT_Control	chr16	3479811	3480044	-86858301	-	Charlie4a	DNA	hAT-Charlie	-219	289	34	1
chr16	3553369	3553370	chunk0073_65_1	191.5063	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr16	3553095	3553731	-86784614	+	MER67C	LTR	ERV1	1	676	-35	1
chr16	3678251	3678252	chunk0073_69_1	7.02986	AR_DHT_Control	chr16	3678202	3678382	-86659963	+	MER3	DNA	hAT-Charlie	4	205	-4	1
chr16	3696382	3696383	chunk0073_70_1	22.2276	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	3696177	3696549	-86641796	+	L1MC4a	LINE	L1	6757	7180	-702	1
chr16	3697084	3697085	chunk0073_71_1	86.42906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	3697026	3697381	-86640964	-	L1ME4b	LINE	L1	-527	365	1	1
chr16	3838297	3838298	chunk0073_77_1	26.4404	AR_DHT_Control	chr16	3837621	3838424	-86499921	+	Tigger3b	DNA	TcMar-Tigger	573	1230	-1	1
chr16	3868849	3868850	chunk0073_79_1	9.89432	AR_DHT_Control	chr16	3868630	3868900	-86469445	+	L2a	LINE	L2	3100	3426	0	1
chr16	4042787	4042788	chunk0073_84_1	35.5741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	4042779	4042949	-86295396	+	MIR	SINE	MIR	1	157	-105	1
chr16	4097904	4097905	chunk0073_88_1	5.44741	AR_DHT_Control	chr16	4097861	4098038	-86240307	-	L2a	LINE	L2	0	3426	3246	1
chr16	4428757	4428758	chunk0073_96_1	10.179	AR_DHT_Control	chr16	4428755	4428882	-85909463	+	AluJo	SINE	Alu	1	125	-187	1
chr16	4435630	4435631	chunk0073_98_1	15.18365	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	4435371	4436191	-85902154	-	L1MB7	LINE	L1	-49	6135	5281	1
chr16	4481723	4481724	chunk0073_100_1	35.5766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	4481573	4481746	-85856599	+	L2c	LINE	L2	3200	3377	-10	1
chr16	4669597	4669598	chunk0073_111_1	265.4987	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	4669559	4669638	-85668707	+	L2c	LINE	L2	3303	3387	0	1
chr16	4844761	4844762	chunk0073_119_1	40.3953	AR_DHT_Control	chr16	4844490	4844773	-85493572	+	AluSz6	SINE	Alu	2	297	-15	1
chr16	4887504	4887505	chunk0073_126_1	6.68224	AR_DHT_Control	chr16	4887366	4887530	-85450815	+	MIRc	SINE	MIR	4	175	-55	1
chr16	4971880	4971881	chunk0073_132_1	21.5224	AR_DHT_Control	chr16	4971823	4971914	-85366431	-	L2a	LINE	L2	-1	3425	3336	1
chr16	5024701	5024702	chunk0073_133_1	7.87682	AR_DHT_Control	chr16	5024597	5024739	-85313606	+	MER5A1	DNA	hAT-Charlie	15	166	0	1
chr16	5065072	5065073	chunk0073_134_1	11.8978	AR_DHT_Control	chr16	5065042	5065174	-85273171	+	(TGTG)n	Simple_repeat	Simple_repeat	1	132	0	1
chr16	5398372	5398373	chunk0073_135_1	5.43586	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	5398348	5398589	-84939756	+	(TGTGTG)n	Simple_repeat	Simple_repeat	1	242	0	1
chr16	6565979	6565980	chunk0073_138_1	14.63333	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	6565842	6566245	-83772100	-	MLT1I	LTR	ERVL-MaLR	-2	409	2	1
chr16	6595188	6595189	chunk0073_142_1	13.4006	AR_DHT_Control	chr16	6595086	6596393	-83741952	-	L1MB7	LINE	L1	-73	6111	4868	1
chr16	6616935	6616936	chunk0073_148_1	73.77015	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	6616835	6617036	-83721309	+	MER58A	DNA	hAT-Charlie	9	218	-6	1
chr16	6693611	6693612	chunk0073_152_1	6.01382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	6692766	6693843	-83644502	+	(ATC)n	Simple_repeat	Simple_repeat	1	1078	0	1
chr16	6957925	6957926	chunk0073_153_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	6957771	6958070	-83380275	-	MLT1F	LTR	ERVL-MaLR	-251	297	8	1
chr16	8987618	8987619	chunk0073_185_1	394.6857	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	8987534	8987661	-81350684	+	MIRc	SINE	MIR	41	170	-98	1
chr16	9021057	9021058	chunk0073_190_1	9.21264	AR_DHT_Control	chr16	9021024	9021067	-81317278	+	L1MC5	LINE	L1	9018	9051	-253	1
chr16	9055860	9055861	chunk0073_194_1	8.21385	AR_DHT_Control	chr16	9055844	9056101	-81282244	-	MIR	SINE	MIR	-6	256	7	1
chr16	9365527	9365528	chunk0073_200_1	237.1911	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	9365433	9365724	-80972621	+	LTR83	LTR	ERVL	8	294	-486	1
chr16	9472826	9472827	chunk0073_202_1	8.09329	AR_DHT_Control	chr16	9472712	9473288	-80865057	+	L1ME2	LINE	L1	5637	6217	-120	1
chr16	9543824	9543825	chunk0073_203_1	49.6181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	9543776	9543907	-80794438	-	MER58C	DNA	hAT-Charlie	0	215	67	1
chr16	10040131	10040132	chunk0073_207_1	10.2986	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	10039875	10040769	-80297576	+	(CA)n	Simple_repeat	Simple_repeat	1	929	0	1
chr16	10628200	10628201	chunk0073_217_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	10628174	10628340	-79710005	-	L2a	LINE	L2	-28	3398	3213	1
chr16	10947333	10947334	chunk0073_223_1	71.16984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	10947271	10947530	-79390815	-	L2c	LINE	L2	-38	3337	3074	1
chr16	11011252	11011253	chunk0073_227_1	31.42828	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	11010416	11012077	-79326268	-	L1MC4	LINE	L1	0	8042	6323	1
chr16	11297159	11297160	chunk0073_231_1	11.55153	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	11296959	11297561	-79040784	+	L1ME2	LINE	L1	5570	6162	-2	1
chr16	11353720	11353721	chunk0073_233_1	10.4905	AR_DHT_Control	chr16	11353520	11353742	-78984603	+	MIR	SINE	MIR	23	253	-9	1
chr16	11496929	11496930	chunk0073_236_1	14.18403	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	11496888	11496933	-78841412	+	(TG)n	Simple_repeat	Simple_repeat	1	45	0	1
chr16	11636467	11636468	chunk0073_240_1	14.07014	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	11636210	11636864	-78701481	-	LTR9A1	LTR	ERV1	0	728	34	1
chr16	11690169	11690170	chunk0073_243_1	13.77701	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	11690101	11690267	-78648078	-	UCON4	Unknown	Unknown	-73	230	55	1
chr16	11704192	11704193	chunk0073_246_1	13.3476	AR_DHT_Control	chr16	11704116	11704902	-78633443	+	L1MC4a	LINE	L1	6853	7739	-143	1
chr16	11790336	11790337	chunk0073_254_1	10.0384	AR_DHT_Control	chr16	11790105	11790443	-78547902	-	L1MC5a	LINE	L1	-2401	376	7	1
chr16	11810440	11810441	chunk0073_256_1	47.19307	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	11810177	11810504	-78527841	-	MER51B	LTR	ERV1	0	377	49	1
chr16	12037131	12037132	chunk0073_263_1	21.25069	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	12037113	12037323	-78301022	-	MER58A	DNA	hAT-Charlie	-2	222	3	1
chr16	12258263	12258264	chunk0073_269_1	9.19742	AR_DHT_Control	chr16	12257826	12258490	-78079855	+	L2b	LINE	L2	2505	3199	-176	1
chr16	12262910	12262911	chunk0073_270_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	12262749	12262957	-78075388	-	L1MB7	LINE	L1	-14	6170	5946	1
chr16	12479079	12479080	chunk0073_275_1	4.67225	AR_DHT_Control	chr16	12479041	12479218	-77859127	+	MER5A	DNA	hAT-Charlie	3	184	-5	1
chr16	12532136	12532137	chunk0073_279_1	117.6762	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	12531842	12532617	-77805728	-	MER99	DNA	hAT?	-3	828	2	1
chr16	12695590	12695591	chunk0073_281_1	65.242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	12695570	12695911	-77642434	+	MER57B2	LTR	ERV1	40	399	-4	1
chr16	12811506	12811507	chunk0073_283_1	38.4021	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	12811399	12811677	-77526668	-	Tigger15a	DNA	TcMar-Tigger	-218	497	203	1
chr16	13497206	13497207	chunk0073_286_1	27.7291	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	13497146	13497238	-76841107	-	L1MA7	LINE	L1	0	6291	6200	1
chr16	13783636	13783637	chunk0073_288_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	13783237	13783771	-76554574	-	MLT1F	LTR	ERVL-MaLR	0	548	3	1
chr16	14020401	14020402	chunk0073_291_1	81.5209	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	14020348	14020671	-76317674	-	L2a	LINE	L2	-1	3425	3031	1
chr16	14082287	14082288	chunk0073_295_1	33.6739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	14081872	14082508	-76255837	-	L1MA8	LINE	L1	-814	6289	5651	1
chr16	14117338	14117339	chunk0073_305_1	13.838	AR_DHT_Control	chr16	14117329	14117612	-76220733	+	L2a	LINE	L2	3054	3409	-17	1
chr16	14139788	14139789	chunk0073_306_1	29.6631	AR_DHT_Control	chr16	14139630	14139791	-76198554	+	L1M4	LINE	L1	5641	5812	-430	1
chr16	14182605	14182606	chunk0073_315_1	20.33348	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	14182352	14183469	-76154876	+	L1MC4	LINE	L1	6448	7729	-313	1
chr16	14276437	14276438	chunk0073_319_1	29.96	AR_DHT_Control	chr16	14276051	14276507	-76061838	+	L1ME1	LINE	L1	5593	6109	-243	1
chr16	14382819	14382820	chunk0073_321_1	41.547	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	14382639	14382878	-75955467	-	L1MB5	LINE	L1	0	6174	5941	1
chr16	14449585	14449586	chunk0073_329_1	8.7059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	14449195	14450213	-75888132	+	L1MC4a	LINE	L1	4812	5897	-1985	1
chr16	14506121	14506122	chunk0073_334_1	34.23872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	14505874	14506582	-75831763	+	L1MC4	LINE	L1	7206	7918	-124	1
chr16	14516655	14516656	chunk0073_337_1	40.92024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	14515947	14517102	-75821243	+	L1M8	LINE	L1	935	2072	-283	1
chr16	14549896	14549897	chunk0073_340_1	5.60881	AR_DHT_Control	chr16	14549757	14549981	-75788364	-	MIRb	SINE	MIR	0	268	46	1
chr16	14656652	14656653	chunk0073_347_1	260.3453	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	14656649	14656763	-75681582	+	L1MC5a	LINE	L1	5687	5788	-2094	1
chr16	14658366	14658367	chunk0073_350_1	10.1724	AR_DHT_Control	chr16	14658011	14658528	-75679817	-	LTR9	LTR	ERV1	-2	610	66	1
chr16	14963440	14963441	chunk0073_351_1	8.97818	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	14963350	14963853	-75374492	-	LTR41	LTR	ERVL	-149	619	4	1
chr16	14969999	14970000	chunk0073_353_1	28.4464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	14969788	14970131	-75368214	+	MER58B	DNA	hAT-Charlie	1	340	-1	1
chr16	15405030	15405031	chunk0073_365_1	87.8944	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	15404944	15405192	-74933153	-	L1MC4	LINE	L1	-1033	7009	6777	1
chr16	15468946	15468947	chunk0073_369_1	8.58634	AR_DHT_Control	chr16	15468648	15468965	-74869380	-	L1MD2	LINE	L1	-954	5894	5579	1
chr16	15551277	15551278	chunk0073_371_1	65.896	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	15551264	15551296	-74787049	+	(CCTT)n	Simple_repeat	Simple_repeat	1	32	0	1
chr16	15812247	15812248	chunk0073_376_1	6.83133	AR_DHT_Control	chr16	15812159	15812293	-74526052	+	MIRb	SINE	MIR	27	173	-95	1
chr16	15874355	15874356	chunk0073_378_1	11.9757	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	15874316	15874502	-74463843	-	MIRc	SINE	MIR	-31	237	7	1
chr16	15965031	15965032	chunk0073_383_1	12.73431	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	15964795	15965047	-74373298	-	L1M5	LINE	L1	-771	5471	5197	1
chr16	16013728	16013729	chunk0073_388_1	35.90027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	16013612	16013936	-74324409	-	L2c	LINE	L2	-98	3289	2933	1
chr16	16029639	16029640	chunk0073_390_1	9.42821	AR_DHT_Control	chr16	16029604	16029700	-74308645	-	L1MC4a	LINE	L1	-5	7877	7774	1
chr16	16030613	16030614	chunk0073_391_1	33.8154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	16030546	16030749	-74307596	-	L1MC5	LINE	L1	-1026	8278	8063	1
chr16	16088651	16088652	chunk0073_397_1	4.70374	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	16088534	16088705	-74249640	+	MER58B	DNA	hAT-Charlie	30	200	-141	1
chr16	16091605	16091606	chunk0073_400_1	186.5942	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	16091424	16091804	-74246541	-	L2a	LINE	L2	-173	3253	2826	1
chr16	16096971	16096972	chunk0073_402_1	136.03882	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	16096935	16097097	-74241248	+	L2a	LINE	L2	3155	3324	-102	1
chr16	16837134	16837135	chunk0073_403_1	23.1851	AR_DHT_Control	chr16	16836812	16837164	-73501181	+	L1MB2	LINE	L1	5709	6046	-125	1
chr16	17247553	17247554	chunk0073_404_1	7.87682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	17247533	17247721	-73090624	-	MIRc	SINE	MIR	-44	224	16	1
chr16	17606548	17606549	chunk0073_410_1	279.7657	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	17606502	17606650	-72731695	+	MIR	SINE	MIR	107	250	-18	1
chr16	19123936	19123937	chunk0073_427_1	9.01771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	19123869	19124070	-71214275	+	MER58A	DNA	hAT-Charlie	1	224	0	1
chr16	19131659	19131660	chunk0073_429_1	112.0363	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	19131595	19131673	-71206672	+	MER58A	DNA	hAT-Charlie	5	81	-143	1
chr16	19251721	19251722	chunk0073_439_1	4.79975	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	19251599	19251759	-71086586	-	LTR105_Mam	LTR	ERVL	-393	207	5	1
chr16	19274421	19274422	chunk0073_440_1	20.0159	AR_DHT_Control	chr16	19274053	19277256	-71061089	-	ERVL-int	LTR	ERVL	-499	5258	2068	1
chr16	19396528	19396529	chunk0073_449_1	50.81957	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	19394166	19401565	-70936780	-	HERVK14C-int	LTR	ERVK	0	7434	1	1
chr16	19434800	19434801	chunk0073_452_1	10.7282	AR_DHT_Control	chr16	19434741	19434975	-70903370	-	MIRb	SINE	MIR	-1	267	13	1
chr16	19578154	19578155	chunk0074_3_1	7.68526	AR_DHT_Control	chr16	19578042	19578261	-70760084	+	MER58A	DNA	hAT-Charlie	1	221	-3	1
chr16	19613421	19613422	chunk0074_7_1	11.9693	AR_DHT_Control	chr16	19613328	19613907	-70724438	-	MLT1K	LTR	ERVL-MaLR	0	595	10	1
chr16	19754213	19754214	chunk0074_12_1	30.02664	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	19754206	19754284	-70584061	+	L2b	LINE	L2	3278	3366	-9	1
chr16	20207277	20207278	chunk0074_19_1	22.40372	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	20207125	20207316	-70131029	-	MIR	SINE	MIR	-15	247	40	1
chr16	20303183	20303184	chunk0074_20_1	7.12934	AR_DHT_Control	chr16	20303075	20303198	-70035147	+	MIRb	SINE	MIR	21	145	-123	1
chr16	20363227	20363228	chunk0074_24_1	4.84918	AR_DHT_Control	chr16	20363194	20363334	-69975011	-	FLAM_A	SINE	Alu	-8	134	1	1
chr16	20426650	20426651	chunk0074_26_1	56.4818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	20426451	20426938	-69911407	+	L1MB3	LINE	L1	5687	6175	-8	1
chr16	20439999	20440000	chunk0074_27_1	165.7083	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	20439976	20440025	-69898320	-	L2b	LINE	L2	-24	3351	3303	1
chr16	20569477	20569478	chunk0074_28_1	7.36432	AR_DHT_Control	chr16	20568218	20573336	-69765009	-	L1ME3Cz	LINE	L1	-376	6491	1508	1
chr16	20596955	20596956	chunk0074_32_1	161.4829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	20596693	20597180	-69741165	-	L1MB3	LINE	L1	-8	6175	5687	1
chr16	20647830	20647831	chunk0074_36_1	62.69872	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	20647739	20648152	-69690193	+	LTR14B	LTR	ERVK	1	608	0	1
chr16	20675203	20675204	chunk0074_37_1	8.46929	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	20674608	20676244	-69662101	+	HERV15-int	LTR	ERV1	1	1385	-7041	1
chr16	20695176	20695177	chunk0074_40_1	58.9058	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	20695161	20695275	-69643070	+	MIRb	SINE	MIR	5	121	-147	1
chr16	20702627	20702628	chunk0074_42_1	27.5818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	20702474	20703527	-69634818	-	L1PA8	LINE	L1	-681	5491	4438	1
chr16	20707711	20707712	chunk0074_45_1	22.367	AR_DHT_Control	chr16	20706967	20707998	-69630347	+	L1M3a	LINE	L1	302	1049	-4906	1
chr16	20716651	20716652	chunk0074_46_1	12.4453	AR_DHT_Control	chr16	20716265	20716874	-69621471	+	LTR14B	LTR	ERVK	14	608	0	1
chr16	20805523	20805524	chunk0074_49_1	12.3853	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	20805458	20806036	-69532309	+	LTR10C	LTR	ERV1	11	591	0	1
chr16	21033415	21033416	chunk0074_60_1	32.1555	AR_DHT_Control	chr16	21033384	21033505	-69304840	-	MIRb	SINE	MIR	-25	243	97	1
chr16	21175663	21175664	chunk0074_62_1	10.6691	AR_DHT_Control	chr16	21175499	21175673	-69162672	-	MER58A	DNA	hAT-Charlie	-17	207	27	1
chr16	21184660	21184661	chunk0074_63_1	19.1389	AR_DHT_Control	chr16	21184330	21184722	-69153623	+	LTR47B2	LTR	ERVL	22	415	-19	1
chr16	21215111	21215112	chunk0074_64_1	12.1886	AR_DHT_Control	chr16	21215033	21215230	-69123115	-	LTR107_Mam	LTR	LTR	-208	362	135	1
chr16	21222577	21222578	chunk0074_65_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	21221786	21222748	-69115597	-	LTR5_Hs	LTR	ERVK	0	968	1	1
chr16	21245117	21245118	chunk0074_66_1	7.53305	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	21245029	21245347	-69092998	+	MER102b	DNA	hAT-Charlie	3	341	0	1
chr16	21246369	21246370	chunk0074_68_1	21.6808	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	21246010	21246594	-69091751	-	LTR10C	LTR	ERV1	0	591	1	1
chr16	21300619	21300620	chunk0074_72_1	5.73469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	21300546	21300678	-69037667	+	LTR57	LTR	ERVL	270	403	-8	1
chr16	21638778	21638779	chunk0074_83_1	7.27655	AR_DHT_Control	chr16	21638524	21638866	-68699479	-	L2c	LINE	L2	-24	3363	2960	1
chr16	21949238	21949239	chunk0074_84_1	6.94497	AR_DHT_Control	chr16	21949141	21949399	-68388946	-	MER4A	LTR	ERV1	-173	592	325	1
chr16	22007547	22007548	chunk0074_88_1	6.98722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22006872	22007647	-68330698	+	L2a	LINE	L2	2507	3419	-7	1
chr16	22207572	22207573	chunk0074_101_1	7.56977	AR_DHT_Control	chr16	22207450	22207585	-68130760	+	MIR	SINE	MIR	100	234	-28	1
chr16	22225191	22225192	chunk0074_106_1	55.01008	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	22224981	22225393	-68112952	-	L2a	LINE	L2	-158	3268	2792	1
chr16	22240473	22240474	chunk0074_109_1	24.4476	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	22240373	22240758	-68097587	+	L1ME4b	LINE	L1	281	670	-222	1
chr16	22298237	22298238	chunk0074_111_1	99.2749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22298230	22298293	-68040052	+	MIR	SINE	MIR	118	180	-82	1
chr16	22386115	22386116	chunk0074_115_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	22386086	22386138	-67952207	+	(TTA)n	Simple_repeat	Simple_repeat	1	53	0	1
chr16	22388233	22388234	chunk0074_116_1	16.363	AR_DHT_Control	chr16	22388226	22388356	-67949989	-	MIRb	SINE	MIR	0	262	124	1
chr16	22409664	22409665	chunk0074_117_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	22408934	22410742	-67927603	-	L1MC1	LINE	L1	-6	6327	4487	1
chr16	22614860	22614861	chunk0074_118_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22614281	22614888	-67723457	-	LTR53-int	LTR	ERVL	0	3556	2506	1
chr16	22614860	22614861	chunk0074_118_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22614859	22615127	-67723218	-	LTR53-int	LTR	ERVL	-1746	1583	1302	1
chr16	22620113	22620114	chunk0074_119_1	5.47663	AR_DHT_Control	chr16	22619735	22620463	-67717882	+	Charlie24	DNA	hAT-Charlie	799	1421	-1029	1
chr16	22646938	22646939	chunk0074_120_1	8.23158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22646775	22646947	-67691398	+	MER102b	DNA	hAT-Charlie	153	333	-8	1
chr16	22660167	22660168	chunk0074_121_1	40.9377	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	22660103	22660328	-67678017	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr16	22727693	22727694	chunk0074_133_1	70.05885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	22727548	22727704	-67610641	-	L2a	LINE	L2	0	3426	3229	1
chr16	22781323	22781324	chunk0074_135_1	16.27175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	22781085	22781365	-67556980	+	L1ME3Cz	LINE	L1	706	997	0	1
chr16	23092915	23092916	chunk0074_140_1	55.17157	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	23092898	23093870	-67244475	+	L1MB5	LINE	L1	4854	5828	-346	1
chr16	23164136	23164137	chunk0074_146_1	27.12338	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	23164045	23164243	-67174102	+	HAL1	LINE	L1	2005	2204	-303	1
chr16	23203163	23203164	chunk0074_147_1	87.4256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	23202615	23203341	-67135004	-	L2c	LINE	L2	-694	2725	1891	1
chr16	23485609	23485610	chunk0074_169_1	36.69239	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	23485380	23485950	-66852395	+	L1ME1	LINE	L1	5505	6092	-87	1
chr16	23540538	23540539	chunk0074_171_1	32.23526	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	23540457	23540631	-66797714	+	L1ME4b	LINE	L1	281	455	-437	1
chr16	23768745	23768746	chunk0074_178_1	40.4106	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	23768559	23768770	-66569575	+	L1ME4a	LINE	L1	5559	5755	-369	1
chr16	23909018	23909019	chunk0074_179_1	7.87199	AR_DHT_Control	chr16	23908989	23909088	-66429257	+	L2b	LINE	L2	3249	3371	-4	1
chr16	23988295	23988296	chunk0074_180_1	7.09019	AR_DHT_Control	chr16	23988219	23988314	-66350031	+	MamRep137	DNA	TcMar-Tigger	407	499	-11	1
chr16	24069174	24069175	chunk0074_181_1	27.92607	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	24068955	24069181	-66269164	-	MIR	SINE	MIR	0	262	8	1
chr16	24701081	24701082	chunk0074_186_1	56.9544	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	24700949	24701207	-65637138	+	L3	LINE	CR1	3470	3760	-339	1
chr16	24851809	24851810	chunk0074_191_1	14.0295	AR_DHT_Control	chr16	24851665	24851866	-65486479	-	MIR	SINE	MIR	-43	219	17	1
chr16	24892297	24892298	chunk0074_192_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	24892238	24892384	-65445961	-	L2a	LINE	L2	-254	3172	3013	1
chr16	24954402	24954403	chunk0074_195_1	24.6242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	24954255	24954473	-65383872	+	MER112	DNA	hAT-Charlie	28	261	0	1
chr16	25049935	25049936	chunk0074_203_1	28.2024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	25049627	25050152	-65288193	+	Tigger3b	DNA	TcMar-Tigger	25	540	-691	1
chr16	25135462	25135463	chunk0074_207_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	25135331	25135557	-65202788	+	MER58A	DNA	hAT-Charlie	1	224	0	1
chr16	25298750	25298751	chunk0074_212_1	86.0378	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	25298697	25298826	-65039519	-	L2b	LINE	L2	-4	3371	3244	1
chr16	25497115	25497116	chunk0074_213_1	35.4137	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	25496977	25497324	-64841021	+	MER57A-int	LTR	ERV1	5460	5807	-380	1
chr16	26119091	26119092	chunk0074_223_1	31.25982	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	26118989	26119209	-64219136	-	MIR	SINE	MIR	-55	207	2	1
chr16	26882625	26882626	chunk0074_225_1	4.83532	AR_DHT_Control	chr16	26882373	26882636	-63455709	+	LTR50	LTR	ERVL	500	789	-6	1
chr16	27005673	27005674	chunk0074_226_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	27004923	27006133	-63332212	+	L1MD1	LINE	L1	2237	3522	-3015	1
chr16	27104074	27104075	chunk0074_227_1	6.04605	AR_DHT_Control	chr16	27103814	27104159	-63234186	+	MLT1I	LTR	ERVL-MaLR	8	411	0	1
chr16	27194049	27194050	chunk0074_231_1	12.8609	AR_DHT_Control	chr16	27193926	27194337	-63144008	+	LTR47A	LTR	ERVL	9	449	-3	1
chr16	27354844	27354845	chunk0074_237_1	5.86499	AR_DHT_Control	chr16	27354794	27354936	-62983409	+	L2c	LINE	L2	3226	3383	-4	1
chr16	27560787	27560788	chunk0074_242_1	82.3141	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	27560773	27560863	-62777482	+	L2b	LINE	L2	3265	3364	-11	1
chr16	27585386	27585387	chunk0074_245_1	4.88663	AR_DHT_Control	chr16	27585209	27585819	-62752526	+	L1MA2	LINE	L1	5422	6065	-239	1
chr16	27880570	27880571	chunk0074_256_1	23.85302	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	27880432	27880602	-62457743	+	MIRb	SINE	MIR	8	173	-95	1
chr16	28032766	28032767	chunk0074_258_1	13.197	AR_DHT_Control	chr16	28032485	28033266	-62305079	+	L2b	LINE	L2	2328	3160	-215	1
chr16	28089585	28089586	chunk0074_259_1	6.73207	AR_DHT_Control	chr16	28088778	28090021	-62248324	+	(AC)n	Simple_repeat	Simple_repeat	1	1324	0	1
chr16	28151356	28151357	chunk0074_264_1	49.1109	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	28151226	28151731	-62186614	+	L1ME3A	LINE	L1	5619	6166	-7	1
chr16	28160658	28160659	chunk0074_265_1	34.506	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	28160520	28160689	-62177656	+	HAL1b	LINE	L1	2136	2345	-76	1
chr16	28191564	28191565	chunk0074_271_1	20.78064	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	28191513	28191674	-62146671	-	MIR3	SINE	MIR	-2	206	32	1
chr16	28527185	28527186	chunk0074_275_1	20.26713	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	28527180	28527391	-61810954	+	L2a	LINE	L2	3108	3426	0	1
chr16	28923566	28923567	chunk0074_281_1	16.13063	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	28923469	28923637	-61414708	+	MER113	DNA	hAT-Charlie	348	519	-2	1
chr16	29342151	29342152	chunk0074_285_1	15.3744	AR_DHT_Control	chr16	29342087	29342168	-60996177	+	L2a	LINE	L2	3343	3426	0	1
chr16	29740485	29740486	chunk0074_286_1	169.0476	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	29740240	29741225	-60597120	+	LTR5B	LTR	ERVK	1	1002	0	1
chr16	29838145	29838146	chunk0074_296_1	10.6691	AR_DHT_Control	chr16	29838137	29838151	-60500194	+	L1MB7	LINE	L1	5725	5738	-446	1
chr16	30140038	30140039	chunk0074_304_1	12.1886	AR_DHT_Control	chr16	30139725	30140268	-60198077	-	HAL1	LINE	L1	-57	2450	1915	1
chr16	30178750	30178751	chunk0074_305_1	7.36432	AR_DHT_Control	chr16	30178642	30178810	-60159535	-	MIRb	SINE	MIR	-35	233	28	1
chr16	30408436	30408437	chunk0074_306_1	4.96796	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	30408368	30408553	-59929792	-	L2b	LINE	L2	-29	3346	3147	1
chr16	30437608	30437609	chunk0074_308_1	49.54161	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	30437413	30437750	-59900595	-	L2a	LINE	L2	-137	3289	2925	1
chr16	30445788	30445789	chunk0074_311_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	30445763	30445827	-59892518	-	LTR83	LTR	ERVL	-151	629	565	1
chr16	30599696	30599697	chunk0074_317_1	171.5674	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	30599575	30599900	-59738445	-	MER77	LTR	ERVL	-295	309	1	1
chr16	30615903	30615904	chunk0074_320_1	45.68407	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	30615682	30616111	-59722234	-	LTR3B_	LTR	ERVK	-62	437	1	1
chr16	30823302	30823303	chunk0074_323_1	13.1909	AR_DHT_Control	chr16	30823289	30823880	-59514465	+	L1MC	LINE	L1	2481	3148	-2998	1
chr16	30898997	30898998	chunk0074_326_1	105.58493	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	30898958	30899199	-59439146	+	Tigger3a	DNA	TcMar-Tigger	96	348	0	1
chr16	30951937	30951938	chunk0074_327_1	20.6695	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	30951723	30951976	-59386369	-	MER102b	DNA	hAT-Charlie	-97	244	1	1
chr16	31135951	31135952	chunk0074_335_1	5.82087	AR_DHT_Control	chr16	31135856	31136117	-59202228	+	(GT)n	Simple_repeat	Simple_repeat	1	267	0	1
chr16	31452570	31452571	chunk0074_339_1	5.6503	AR_DHT_Control	chr16	31452458	31452594	-58885751	-	Tigger15a	DNA	TcMar-Tigger	-553	162	34	1
chr16	31544815	31544816	chunk0074_342_1	17.72585	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	31544439	31545028	-58793317	+	LTR10C	LTR	ERV1	1	591	0	1
chr16	31557365	31557366	chunk0074_344_1	9.19742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	31556621	31557760	-58780585	+	L1PA15-16	LINE	L1	53	1188	-5665	1
chr16	31573742	31573743	chunk0074_345_1	7.36432	AR_DHT_Control	chr16	31572352	31575196	-58763149	+	L1MA3	LINE	L1	4210	7021	0	1
chr16	33336831	33336832	chunk0074_346_1	33.4534	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	33335926	33340033	-56998312	+	(TGGCTTGGC)n	Simple_repeat	Simple_repeat	1	4327	0	1
chr16	33337844	33337845	chunk0074_347_1	8.0483	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	33335926	33340033	-56998312	+	(TGGCTTGGC)n	Simple_repeat	Simple_repeat	1	4327	0	1
chr16	33339908	33339909	chunk0074_348_1	62.7269	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	33335926	33340033	-56998312	+	(TGGCTTGGC)n	Simple_repeat	Simple_repeat	1	4327	0	1
chr16	33672650	33672651	chunk0074_351_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	33670428	33672863	-56665482	+	L1MDa	LINE	L1	3365	5860	-890	1
chr16	34045878	34045879	chunk0074_356_1	4.44156	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	34044858	34046414	-56291931	+	L1MB4	LINE	L1	13	1646	-4961	1
chr16	34573061	34573062	chunk0074_360_1	268.1784	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	34571579	34576219	-55762126	+	(GAATG)n	Satellite	Satellite	1	4722	0	1
chr16	34574225	34574226	chunk0074_361_1	69.8855	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr16	34571579	34576219	-55762126	+	(GAATG)n	Satellite	Satellite	1	4722	0	1
chr16	35177989	35177990	chunk0074_385_1	6.93299	AR_DHT_Control	chr16	35177797	35178028	-55160317	+	L1PA15-16	LINE	L1	1269	1507	-5346	1
chr16	35307116	35307117	chunk0074_389_1	7.97093	AR_DHT_Control	chr16	35307019	35307183	-55031162	+	BSR/Beta	Satellite	Satellite	1	166	0	1
chr16	35367862	35367863	chunk0074_391_1	5.56779	AR_DHT_Control	chr16	35365314	35368123	-54970222	+	BSR/Beta	Satellite	Satellite	1	2783	-44	1
chr16	35375241	35375242	chunk0074_392_1	10.6105	AR_DHT_Control	chr16	35375081	35375292	-54963053	+	L1M4	LINE	L1	3793	4012	-2134	1
chr16	35382501	35382502	chunk0074_396_1	18.33192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	35382177	35382555	-54955790	-	MER57F	LTR	ERV1	-42	393	4	1
chr16	35450962	35450963	chunk0074_401_1	7.03383	AR_DHT_Control	chr16	35450061	35451021	-54887324	+	BSR/Beta	Satellite	Satellite	1	959	-1	1
chr16	35463674	35463675	chunk0074_402_1	26.6937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	35463368	35463838	-54874507	-	L1MB2	LINE	L1	-2	6169	5675	1
chr16	35516790	35516791	chunk0074_407_1	20.7159	AR_DHT_Control	chr16	35516603	35517040	-54821305	+	LTR3B_	LTR	ERVK	1	444	-55	1
chr16	35524212	35524213	chunk0074_408_1	196.6875	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	35524055	35524479	-54813866	+	LTR3B	LTR	ERVK	1	432	-5	1
chr16	35560174	35560175	chunk0074_411_1	7.42373	AR_DHT_Control	chr16	35560061	35560598	-54777747	+	BSR/Beta	Satellite	Satellite	1	543	0	1
chr16	35600437	35600438	chunk0074_413_1	17.61029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	35600133	35600721	-54737624	-	LTR10C	LTR	ERV1	0	591	1	1
chr16	35629165	35629166	chunk0074_416_1	24.62192	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	35628808	35629805	-54708540	+	LTR5B	LTR	ERVK	1	1002	0	1
chr16	35847011	35847012	chunk0074_418_1	43.6859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	35846477	35847012	-54491333	+	L1ME3A	LINE	L1	5026	5544	-629	1
chr16	46588051	46588052	chunk0075_3_1	34.3245	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	46587611	46591326	-43747019	+	L1PA5	LINE	L1	2435	6151	-3	1
chr16	46785310	46785311	chunk0075_10_1	19.3934	AR_DHT_Control	chr16	46785194	46786798	-43551547	+	L1MA8	LINE	L1	746	2137	-4516	1
chr16	46789245	46789246	chunk0075_12_1	70.629	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	46788915	46789434	-43548911	+	L1MA8	LINE	L1	2738	3275	-3451	1
chr16	46831267	46831268	chunk0075_15_1	6.6833	AR_DHT_Control	chr16	46831258	46831293	-43507052	+	(GC)n	Simple_repeat	Simple_repeat	1	35	0	1
chr16	46864498	46864499	chunk0075_18_1	4.12604	AR_DHT_Control	chr16	46864285	46864568	-43473777	+	AluJr	SINE	Alu	11	291	-21	1
chr16	46866970	46866971	chunk0075_19_1	8.08101	AR_DHT_Control	chr16	46866705	46867007	-43471338	+	AluSz	SINE	Alu	2	303	-9	1
chr16	46882613	46882614	chunk0075_23_1	51.4434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	46882531	46882636	-43455709	-	MamSINE1	SINE	tRNA-RTE	-16	274	166	1
chr16	46954827	46954828	chunk0075_32_1	10.8017	AR_DHT_Control	chr16	46954620	46954854	-43383491	+	Tigger3b	DNA	TcMar-Tigger	944	1215	-16	1
chr16	47058931	47058932	chunk0075_40_1	39.8189	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	47058590	47059001	-43279344	-	MER21C	LTR	ERVL	-365	573	124	1
chr16	47416762	47416763	chunk0075_44_1	10.0392	AR_DHT_Control	chr16	47416475	47416849	-42921496	+	MSTB	LTR	ERVL-MaLR	1	426	0	1
chr16	47445457	47445458	chunk0075_47_1	14.2911	AR_DHT_Control	chr16	47443945	47445509	-42892836	-	Charlie2a	DNA	hAT-Charlie	-1230	1631	39	1
chr16	47524189	47524190	chunk0075_52_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	47522941	47524217	-42814128	-	L1M4	LINE	L1	-6162	1355	17	1
chr16	47860810	47860811	chunk0075_63_1	10.8679	AR_DHT_Control	chr16	47860770	47861353	-42476992	+	MER6	DNA	TcMar-Tigger	1	595	-270	1
chr16	47897640	47897641	chunk0075_65_1	78.20568	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	47896853	47900148	-42438197	+	L1PA6	LINE	L1	9	3295	-2851	1
chr16	47916466	47916467	chunk0075_66_1	7.36432	AR_DHT_Control	chr16	47916045	47916989	-42421356	+	L1ME2z	LINE	L1	5175	6164	-280	1
chr16	48165557	48165558	chunk0075_77_1	78.8955	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	48165391	48165786	-42172559	+	L2b	LINE	L2	2976	3422	-4	1
chr16	48230006	48230007	chunk0075_81_1	8.11543	AR_DHT_Control	chr16	48229772	48230262	-42108083	+	L2b	LINE	L2	2888	3375	0	1
chr16	48268447	48268448	chunk0075_84_1	39.2008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	48268342	48268557	-42069788	-	L1MC	LINE	L1	-2167	3979	3742	1
chr16	48284915	48284916	chunk0075_87_1	23.25216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	48284857	48285777	-42052568	-	L1M4	LINE	L1	-5320	2197	1226	1
chr16	48287449	48287450	chunk0075_88_1	30.2171	AR_DHT_Control	chr16	48286795	48287903	-42050442	-	L1M4	LINE	L1	-6383	1134	17	1
chr16	48313317	48313318	chunk0075_90_1	7.69414	AR_DHT_Control	chr16	48313056	48314585	-42023760	-	L1PA11	LINE	L1	-1	6173	4432	1
chr16	48383967	48383968	chunk0075_94_1	5.56714	AR_DHT_Control	chr16	48383903	48384130	-41954215	-	MIR	SINE	MIR	-2	260	17	1
chr16	48457938	48457939	chunk0075_99_1	5.52722	AR_DHT_Control	chr16	48457641	48458114	-41880231	-	L1ME3A	LINE	L1	-61	6610	6096	1
chr16	48668052	48668053	chunk0075_106_1	17.3925	AR_DHT_Control	chr16	48666607	48668775	-41669570	-	L1PA6	LINE	L1	-3986	2198	6	1
chr16	49071277	49071278	chunk0075_112_1	27.3607	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	49071248	49072439	-41265906	-	L1MEf	LINE	L1	-3987	2428	1239	1
chr16	49117387	49117388	chunk0075_114_1	63.07371	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	49117341	49117492	-41220853	+	L2b	LINE	L2	3199	3356	-19	1
chr16	49272758	49272759	chunk0075_117_1	20.09469	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	49272700	49272782	-41065563	-	L2c	LINE	L2	-60	3327	3251	1
chr16	49843174	49843175	chunk0075_123_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	49843007	49843351	-40494994	+	L1ME3G	LINE	L1	232	580	-344	1
chr16	50002454	50002455	chunk0075_127_1	7.36432	AR_DHT_Control	chr16	50002260	50002533	-40335812	-	L2a	LINE	L2	-5	3421	3129	1
chr16	50120359	50120360	chunk0075_129_1	15.9053	AR_DHT_Control	chr16	50120331	50120448	-40217897	-	FRAM	SINE	Alu	-47	129	14	1
chr16	50162049	50162050	chunk0075_130_1	11.022	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	50161639	50162519	-40175826	-	L1MD2	LINE	L1	0	6359	5443	1
chr16	50174098	50174099	chunk0075_131_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	50174094	50174396	-40163949	-	AluSz6	SINE	Alu	-9	303	2	1
chr16	50188356	50188357	chunk0075_136_1	45.86547	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	50188066	50188623	-40149722	-	Charlie29a	DNA	hAT-Charlie	-153	566	13	1
chr16	50337111	50337112	chunk0075_142_1	33.5124	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	50336958	50337156	-40001189	-	MIR	SINE	MIR	0	268	5	1
chr16	50360703	50360704	chunk0075_144_1	13.31038	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	50360630	50360769	-39977576	+	L2b	LINE	L2	3230	3374	-1	1
chr16	50487767	50487768	chunk0075_145_1	10.3842	AR_DHT_Control	chr16	50487758	50488117	-39850228	-	THE1B	LTR	ERVL-MaLR	0	364	1	1
chr16	50553060	50553061	chunk0075_147_1	6.13982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	50552934	50553221	-39785124	+	L1MEh	LINE	L1	725	1023	-1212	1
chr16	51683978	51683979	chunk0075_159_1	81.9154	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	51683836	51684613	-38653732	+	LTR39	LTR	ERV1	1	783	0	1
chr16	51953330	51953331	chunk0075_169_1	27.93348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	51953137	51953398	-38384947	+	MIR	SINE	MIR	1	262	0	1
chr16	52070775	52070776	chunk0075_179_1	6.00544	AR_DHT_Control	chr16	52070726	52070781	-38267564	-	MIRb	SINE	MIR	-66	202	147	1
chr16	52097319	52097320	chunk0075_180_1	10.5859	AR_DHT_Control	chr16	52097120	52097326	-38241019	+	MIRb	SINE	MIR	16	225	-43	1
chr16	52100367	52100368	chunk0075_182_1	80.6333	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	52100151	52100410	-38237935	-	MIR	SINE	MIR	0	262	1	1
chr16	52243403	52243404	chunk0075_187_1	18.2513	AR_DHT_Control	chr16	52243313	52243754	-38094591	+	ERV3-16A3_I-int	LTR	ERVL	4785	5226	0	1
chr16	52253501	52253502	chunk0075_188_1	12.1886	AR_DHT_Control	chr16	52253434	52253541	-38084804	+	MLT1K	LTR	ERVL-MaLR	96	201	-341	1
chr16	52294881	52294882	chunk0075_190_1	4.59338	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	52294856	52295011	-38043334	-	MIRb	SINE	MIR	-67	201	38	1
chr16	52390062	52390063	chunk0075_191_1	15.4161	AR_DHT_Control	chr16	52389413	52390737	-37947608	+	L1MA6	LINE	L1	4948	6300	0	1
chr16	52425595	52425596	chunk0075_192_1	5.54895	AR_DHT_Control	chr16	52425223	52425759	-37912586	+	MLT1K	LTR	ERVL-MaLR	36	595	0	1
chr16	52439436	52439437	chunk0075_193_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	52439380	52439641	-37898704	+	(CTG)n	Simple_repeat	Simple_repeat	1	263	0	1
chr16	52477717	52477718	chunk0075_195_1	8.78287	AR_DHT_Control	chr16	52477685	52477816	-37860529	+	MIR	SINE	MIR	73	205	-57	1
chr16	52502153	52502154	chunk0075_202_1	209.6349	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	52502146	52502219	-37836126	-	L2b	LINE	L2	-15	3372	3296	1
chr16	52526979	52526980	chunk0075_204_1	14.34988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	52526935	52527050	-37811295	-	L2b	LINE	L2	-19	3356	3240	1
chr16	52725577	52725578	chunk0075_218_1	12.3828	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	52725517	52725674	-37612671	+	MIRb	SINE	MIR	42	207	-61	1
chr16	52756939	52756940	chunk0075_220_1	154.78304	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	52756613	52757075	-37581270	-	L2a	LINE	L2	-2	3424	2930	1
chr16	52805841	52805842	chunk0075_221_1	9.70003	AR_DHT_Control	chr16	52805742	52805875	-37532470	-	L2b	LINE	L2	0	3426	3271	1
chr16	52845307	52845308	chunk0075_222_1	10.6083	AR_DHT_Control	chr16	52845225	52845320	-37493025	+	L1P3	LINE	L1	4446	4540	-1606	1
chr16	52898427	52898428	chunk0075_228_1	75.049	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	52898425	52898603	-37439742	+	L1M7	LINE	L1	2787	2975	-3239	1
chr16	52925080	52925081	chunk0075_229_1	64.77	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	52924704	52925178	-37413167	+	L1MEd	LINE	L1	2206	2687	-3459	1
chr16	52929472	52929473	chunk0075_231_1	19.19556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	52929418	52929512	-37408833	-	MamRep434	DNA	TcMar-Tigger	-308	118	26	1
chr16	52937954	52937955	chunk0075_233_1	21.5882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	52937085	52938520	-37399825	+	L1MC1	LINE	L1	3726	6224	-109	1
chr16	53045905	53045906	chunk0075_236_1	11.60932	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53045703	53045921	-37292424	-	MIRb	SINE	MIR	-54	214	4	1
chr16	53103497	53103498	chunk0075_241_1	15.00929	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	53103497	53103700	-37234645	-	MIRb	SINE	MIR	-46	222	19	1
chr16	53147641	53147642	chunk0075_245_1	63.2772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53147371	53147903	-37190442	-	L1MB4	LINE	L1	-30	6751	6194	1
chr16	53164293	53164294	chunk0075_247_1	15.93749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53164291	53164617	-37173728	+	AluJr	SINE	Alu	1	312	0	1
chr16	53183376	53183377	chunk0075_248_1	14.6688	AR_DHT_Control	chr16	53183159	53183401	-37154944	-	L1ME3Cz	LINE	L1	-29	968	704	1
chr16	53195113	53195114	chunk0075_249_1	8.27376	AR_DHT_Control	chr16	53195060	53195305	-37143040	-	L1ME3A	LINE	L1	-13	6160	5926	1
chr16	53411545	53411546	chunk0075_252_1	30.0883	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53411228	53411863	-36926482	+	L1MC3	LINE	L1	5367	6003	-1782	1
chr16	53472073	53472074	chunk0075_259_1	23.65565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	53471768	53474015	-36864330	-	L1MB5	LINE	L1	-33	7001	4647	1
chr16	53476484	53476485	chunk0075_261_1	12.511	AR_DHT_Control	chr16	53476123	53476903	-36861442	-	L1MB5	LINE	L1	-3123	3883	3075	1
chr16	53708835	53708836	chunk0075_265_1	21.8857	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	53708380	53709092	-36629253	-	L1MB7	LINE	L1	-392	5792	5043	1
chr16	53768860	53768861	chunk0075_269_1	43.7416	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	53768728	53768926	-36569419	-	UCON8	DNA	DNA	-821	294	87	1
chr16	53780215	53780216	chunk0075_272_1	34.60191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53779837	53780428	-36557917	+	L2a	LINE	L2	2589	3199	-227	1
chr16	53794039	53794040	chunk0075_273_1	16.12105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53793882	53794237	-36544108	+	L1M5	LINE	L1	5294	5667	-457	1
chr16	53865648	53865649	chunk0075_278_1	6.73207	AR_DHT_Control	chr16	53865517	53865765	-36472580	+	L2	LINE	L2	2531	2780	-639	1
chr16	53964324	53964325	chunk0075_287_1	15.61698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	53964168	53964387	-36373958	-	MER58A	DNA	hAT-Charlie	0	224	2	1
chr16	54185660	54185661	chunk0075_295_1	8.21385	AR_DHT_Control	chr16	54185091	54186458	-36151887	-	L1M4c	LINE	L1	-4987	1762	7	1
chr16	54293051	54293052	chunk0075_299_1	66.62457	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	54292967	54293122	-36045223	+	MER91A	DNA	hAT-Tip100	1	168	-28	1
chr16	54388693	54388694	chunk0075_305_1	14.6644	AR_DHT_Control	chr16	54388684	54388883	-35949462	+	L2a	LINE	L2	3215	3425	-1	1
chr16	54422331	54422332	chunk0075_308_1	60.01707	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	54422241	54422350	-35915995	+	UCON55	DNA	TcMar-Tigger	6	114	-78	1
chr16	54429224	54429225	chunk0075_311_1	17.9667	AR_DHT_Control	chr16	54429205	54429275	-35909070	+	L2a	LINE	L2	3356	3426	0	1
chr16	54457898	54457899	chunk0075_313_1	27.62869	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	54457800	54458060	-35880285	-	MIR	SINE	MIR	0	262	1	1
chr16	54578825	54578826	chunk0075_322_1	5.6425	AR_DHT_Control	chr16	54578581	54578828	-35759517	+	MIRb	SINE	MIR	2	251	-17	1
chr16	54685450	54685451	chunk0075_330_1	9.87004	AR_DHT_Control	chr16	54685398	54685560	-35652785	+	L1ME4c	LINE	L1	441	599	-293	1
chr16	54749141	54749142	chunk0075_334_1	13.7636	AR_DHT_Control	chr16	54748965	54749326	-35589019	-	LTR16C	LTR	ERVL	0	489	131	1
chr16	54848570	54848571	chunk0075_335_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	54848410	54848696	-35489649	-	MLT1I	LTR	ERVL-MaLR	-6	405	123	1
chr16	55369184	55369185	chunk0075_344_1	6.83133	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	55369167	55369198	-34969147	+	A-rich	Low_complexity	Low_complexity	1	32	0	1
chr16	55504278	55504279	chunk0075_348_1	14.4789	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	55504169	55504345	-34834000	-	MER102b	DNA	hAT-Charlie	-157	184	34	1
chr16	55911381	55911382	chunk0075_352_1	12.0416	AR_DHT_Control	chr16	55911136	55911436	-34426909	-	MLT1J	LTR	ERVL-MaLR	-149	363	1	1
chr16	56032004	56032005	chunk0075_358_1	37.3477	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	56031526	56032494	-34305851	-	L1MD1	LINE	L1	-8	6625	5674	1
chr16	56201163	56201164	chunk0075_360_1	9.04976	AR_DHT_Control	chr16	56200988	56201934	-34136411	-	L2c	LINE	L2	0	3387	2361	1
chr16	56373268	56373269	chunk0075_368_1	38.89425	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	56373024	56373885	-33964460	+	L1MC1	LINE	L1	243	1154	-5354	1
chr16	56487541	56487542	chunk0075_373_1	70.6072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	56487363	56487861	-33850484	+	L1M5	LINE	L1	4263	4742	-1404	1
chr16	56807083	56807084	chunk0075_391_1	5.67914	AR_DHT_Control	chr16	56806900	56807557	-33530788	+	L2a	LINE	L2	2737	3422	-4	1
chr16	56809040	56809041	chunk0075_392_1	8.76615	AR_DHT_Control	chr16	56808890	56809104	-33529241	-	L1ME4b	LINE	L1	-1968	809	596	1
chr16	56816060	56816061	chunk0075_395_1	24.69549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	56816019	56816268	-33522077	+	MIR	SINE	MIR	2	262	0	1
chr16	56896331	56896332	chunk0075_396_1	4.9245	AR_DHT_Control	chr16	56896115	56896462	-33441883	+	MER113	DNA	hAT-Charlie	1	362	-159	1
chr16	56914405	56914406	chunk0075_397_1	14.7635	AR_DHT_Control	chr16	56914295	56914526	-33423819	-	MER112	DNA	hAT-Charlie	-7	254	4	1
chr16	56924076	56924077	chunk0075_401_1	16.0047	AR_DHT_Control	chr16	56923547	56924088	-33414257	-	L1MB5	LINE	L1	-38	6136	5586	1
chr16	56967970	56967971	chunk0075_404_1	90.2133	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	56967765	56967990	-33370355	+	AluJo	SINE	Alu	87	312	0	1
chr16	57234033	57234034	chunk0075_411_1	4.06036	AR_DHT_Control	chr16	57233669	57234538	-33103807	+	L2a	LINE	L2	2515	3396	-30	1
chr16	57275777	57275778	chunk0075_416_1	8.08101	AR_DHT_Control	chr16	57275729	57275826	-33062519	+	L1ME4b	LINE	L1	21	129	-763	1
chr16	57421089	57421090	chunk0075_421_1	15.3887	AR_DHT_Control	chr16	57420866	57421207	-32917138	+	L1MA4A	LINE	L1	5603	5949	-354	1
chr16	57501010	57501011	chunk0075_423_1	190.43937	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	57500966	57501154	-32837191	-	L2b	LINE	L2	0	3375	3176	1
chr16	57596645	57596646	chunk0075_427_1	7.87199	AR_DHT_Control	chr16	57596458	57598332	-32740013	-	L1ME3B	LINE	L1	-1818	4328	2320	1
chr16	57635817	57635818	chunk0075_431_1	29.19046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	57635810	57635893	-32702452	+	MIR	SINE	MIR	74	172	-90	1
chr16	57644478	57644479	chunk0075_433_1	6.6363	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	57644214	57645077	-32693268	+	(CA)n	Simple_repeat	Simple_repeat	1	867	0	1
chr16	58021939	58021940	chunk0075_442_1	47.36246	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58021919	58022028	-32316317	-	MIRc	SINE	MIR	-42	226	99	1
chr16	58087677	58087678	chunk0075_446_1	9.56062	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	58087148	58088079	-32250266	+	(CACATA)n	Simple_repeat	Simple_repeat	1	962	0	1
chr16	58124487	58124488	chunk0075_447_1	8.78287	AR_DHT_Control	chr16	58124382	58125402	-32212943	-	Tigger3b	DNA	TcMar-Tigger	0	1231	295	1
chr16	58126085	58126086	chunk0075_448_1	6.06371	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	58126002	58126141	-32212204	-	MIRb	SINE	MIR	-48	220	44	1
chr16	58222078	58222079	chunk0075_452_1	14.5882	AR_DHT_Control	chr16	58221882	58222154	-32116191	+	L1ME3G	LINE	L1	467	749	-175	1
chr16	58433655	58433656	chunk0075_464_1	14.13809	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	58433393	58433808	-31904537	-	LTR47B2	LTR	ERVL	-12	422	1	1
chr16	58469546	58469547	chunk0076_3_1	59.1673	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58469423	58469688	-31868657	+	L1ME4b	LINE	L1	314	492	-400	1
chr16	58477830	58477831	chunk0076_4_1	10.7282	AR_DHT_Control	chr16	58477177	58478108	-31860237	+	L1MC4a	LINE	L1	6644	7556	-326	1
chr16	58492682	58492683	chunk0076_5_1	20.4276	AR_DHT_Control	chr16	58492558	58492726	-31845619	-	AluJo	SINE	Alu	-31	281	119	1
chr16	58592567	58592568	chunk0076_8_1	22.62794	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58592431	58592603	-31745742	+	FAM	SINE	Alu	1	171	-14	1
chr16	58674746	58674747	chunk0076_10_1	55.4167	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58674667	58674792	-31663553	+	L2a	LINE	L2	3267	3388	-38	1
chr16	58736225	58736226	chunk0076_14_1	13.63002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58736125	58736716	-31601629	+	LTR10C	LTR	ERV1	1	591	0	1
chr16	58774063	58774064	chunk0076_18_1	47.5835	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	58774023	58774352	-31563993	-	L2c	LINE	L2	0	3387	3021	1
chr16	58789035	58789036	chunk0076_19_1	35.97637	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	58788654	58789337	-31549008	-	L1MEc	LINE	L1	-5613	787	92	1
chr16	58809449	58809450	chunk0076_20_1	6.48643	AR_DHT_Control	chr16	58809360	58809625	-31528720	+	L2	LINE	L2	2517	2780	-639	1
chr16	58861645	58861646	chunk0076_22_1	18.51655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	58861563	58861652	-31476693	-	L2c	LINE	L2	0	3375	3290	1
chr16	59211822	59211823	chunk0076_24_1	12.53542	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	59211700	59211864	-31126481	+	MIR3	SINE	MIR	4	167	-41	1
chr16	59337627	59337628	chunk0076_30_1	85.77162	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	59337517	59337647	-31000698	-	L2a	LINE	L2	0	3426	3305	1
chr16	59373479	59373480	chunk0076_31_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	59372029	59375130	-30963215	-	L1MD1	LINE	L1	-12	6621	3428	1
chr16	59486914	59486915	chunk0076_33_1	9.44294	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	59486765	59487666	-30850679	-	L1PA16	LINE	L1	-794	5352	4490	1
chr16	59729398	59729399	chunk0076_37_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	59728705	59731354	-30606991	+	L1PA13	LINE	L1	11	2643	-4123	1
chr16	59786615	59786616	chunk0076_38_1	72.7782	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	59784506	59787731	-30550614	-	L1MC3	LINE	L1	-921	7282	4061	1
chr16	59880943	59880944	chunk0076_41_1	59.4754	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	59880923	59881048	-30457297	-	L2a	LINE	L2	0	3426	3270	1
chr16	59965772	59965773	chunk0076_44_1	13.73594	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	59965466	59966052	-30372293	-	LTR10C	LTR	ERV1	0	591	1	1
chr16	60158451	60158452	chunk0076_46_1	6.48643	AR_DHT_Control	chr16	60158400	60158564	-30179781	+	MER5A1	DNA	hAT-Charlie	2	165	-1	1
chr16	60835769	60835770	chunk0076_49_1	6.48643	AR_DHT_Control	chr16	60835360	60835808	-29502537	-	LTR16C	LTR	ERVL	-4	485	7	1
chr16	61212557	61212558	chunk0076_54_1	31.2201	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	61212528	61212570	-29125775	+	(CTTTGTT)n	Simple_repeat	Simple_repeat	1	42	0	1
chr16	61354214	61354215	chunk0076_56_1	12.0277	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	61354070	61355009	-28983336	+	L1MC1	LINE	L1	2	946	-5562	1
chr16	61423069	61423070	chunk0076_60_1	12.8553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	61422902	61423082	-28915263	+	L2c	LINE	L2	2956	3136	-251	1
chr16	61460117	61460118	chunk0076_62_1	91.1115	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	61460025	61460210	-28878135	-	L2b	LINE	L2	-1	3374	3220	1
chr16	63007695	63007696	chunk0076_65_1	24.9088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	63007111	63007977	-27330368	-	L1MC1	LINE	L1	-5	6328	5446	1
chr16	63339388	63339389	chunk0076_71_1	31.1372	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	63339078	63339948	-26998397	+	L1MC1	LINE	L1	5282	6181	-327	1
chr16	63403111	63403112	chunk0076_74_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	63402933	63403320	-26935025	-	L1MB4	LINE	L1	-4634	2233	1839	1
chr16	63463720	63463721	chunk0076_75_1	209.9903	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	63463685	63463727	-26874618	-	MLT2B4	LTR	ERVL	-495	61	20	1
chr16	63506237	63506238	chunk0076_76_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	63505662	63506565	-26831780	+	L1MA10	LINE	L1	639	1610	-5169	1
chr16	63631863	63631864	chunk0076_80_1	17.24241	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	63631270	63632408	-26705937	+	L1MD1	LINE	L1	1821	2928	-3609	1
chr16	64640490	64640491	chunk0076_86_1	124.8393	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	64639682	64640920	-25697425	-	L1PA8A	LINE	L1	0	6131	4893	1
chr16	64695886	64695887	chunk0076_87_1	6.48643	AR_DHT_Control	chr16	64695508	64695958	-25642387	+	MLT1H2	LTR	ERVL-MaLR	73	541	-8	1
chr16	64782761	64782762	chunk0076_89_1	71.7359	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	64782001	64783395	-25554950	-	L1MC1	LINE	L1	0	6333	4970	1
chr16	64996886	64996887	chunk0076_94_1	6.88185	AR_DHT_Control	chr16	64996507	64997016	-25341329	+	L1PA16	LINE	L1	5608	6115	-51	1
chr16	65208277	65208278	chunk0076_96_1	12.8082	AR_DHT_Control	chr16	65207951	65208285	-25130060	-	L2b	LINE	L2	-1	3374	3008	1
chr16	65773331	65773332	chunk0076_99_1	22.45956	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	65773254	65773383	-24564962	-	MIRb	SINE	MIR	-62	206	67	1
chr16	66410948	66410949	chunk0076_107_1	21.8232	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	66410792	66411382	-23926963	-	Tigger18a	DNA	TcMar-Tigger	-40	812	150	1
chr16	66435266	66435267	chunk0076_108_1	5.60881	AR_DHT_Control	chr16	66435229	66435412	-23902933	+	MIRb	SINE	MIR	32	235	-33	1
chr16	66503240	66503241	chunk0076_110_1	180.5592	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	66503032	66503523	-23834822	+	L2b	LINE	L2	2782	3325	-50	1
chr16	66544512	66544513	chunk0076_116_1	5.36932	AR_DHT_Control	chr16	66544465	66544571	-23793774	-	L2a	LINE	L2	-9	3417	3259	1
chr16	66639025	66639026	chunk0076_119_1	18.1385	AR_DHT_Control	chr16	66638887	66639050	-23699295	+	L1MA8	LINE	L1	6123	6280	-11	1
chr16	66988304	66988305	chunk0076_138_1	4.84918	AR_DHT_Control	chr16	66988134	66988310	-23350035	+	L2b	LINE	L2	3082	3278	-97	1
chr16	67323269	67323270	chunk0076_157_1	11.8978	AR_DHT_Control	chr16	67322597	67323359	-23014986	+	L1M4	LINE	L1	5020	5808	-376	1
chr16	67336325	67336326	chunk0076_158_1	66.9422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	67336031	67336598	-23001747	-	L1MC2	LINE	L1	-367	5977	5373	1
chr16	67441665	67441666	chunk0076_173_1	13.77817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	67441626	67441821	-22896524	+	MIRb	SINE	MIR	14	202	-66	1
chr16	67624439	67624440	chunk0076_182_1	22.6427	AR_DHT_Control	chr16	67624225	67624584	-22713761	+	L2	LINE	L2	1858	2202	-1217	1
chr16	67678663	67678664	chunk0076_185_1	16.17169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	67678574	67678797	-22659548	+	MIRb	SINE	MIR	14	239	-29	1
chr16	68100167	68100168	chunk0076_203_1	39.57615	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	68099974	68100294	-22238051	-	L1MD2	LINE	L1	-453	5906	5581	1
chr16	68117014	68117015	chunk0076_205_1	9.83323	AR_DHT_Control	chr16	68116972	68117248	-22221097	-	Tigger15a	DNA	TcMar-Tigger	-391	324	13	1
chr16	68416612	68416613	chunk0076_221_1	26.75593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	68416588	68416789	-21921556	+	L4_A_Mam	LINE	RTE-X	3852	4060	-930	1
chr16	68637352	68637353	chunk0076_222_1	12.2633	AR_DHT_Control	chr16	68637307	68637531	-21700814	-	MIR	SINE	MIR	-1	267	16	1
chr16	68885866	68885867	chunk0076_233_1	14.2738	AR_DHT_Control	chr16	68885673	68886218	-21452127	-	L1MB8	LINE	L1	-309	5869	5323	1
chr16	68931383	68931384	chunk0076_234_1	42.495	AR_DHT_Control	chr16	68931301	68931863	-21406482	+	L1MB8	LINE	L1	5542	6121	-57	1
chr16	68941177	68941178	chunk0076_235_1	41.4311	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	68940354	68941463	-21396882	-	MER101-int	LTR	ERV1	-2037	4602	2857	1
chr16	69244435	69244436	chunk0076_248_1	34.59901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	69244257	69244490	-21093855	+	L1ME4b	LINE	L1	616	879	-13	1
chr16	69298930	69298931	chunk0076_259_1	29.7596	AR_DHT_Control	chr16	69298821	69299076	-21039269	+	L2b	LINE	L2	3100	3369	-6	1
chr16	69395280	69395281	chunk0076_262_1	6.79294	AR_DHT_Control	chr16	69395260	69395383	-20942962	+	L1ME4b	LINE	L1	495	574	-318	1
chr16	69706837	69706838	chunk0076_285_1	16.6648	AR_DHT_Control	chr16	69706768	69706908	-20631437	+	MIR	SINE	MIR	105	252	-10	1
chr16	69763715	69763716	chunk0076_287_1	29.1388	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	69763682	69763820	-20574525	+	L2c	LINE	L2	3245	3387	0	1
chr16	69852064	69852065	chunk0076_290_1	54.0945	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	69852011	69852283	-20486062	-	L1MC1	LINE	L1	-680	5653	5394	1
chr16	69867340	69867341	chunk0076_295_1	5.77762	AR_DHT_Control	chr16	69867137	69867359	-20470986	-	Tigger12c	DNA	TcMar-Tigger	-433	301	73	1
chr16	69910253	69910254	chunk0076_298_1	132.4876	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	69910154	69910319	-20428026	-	L1MC5a	LINE	L1	-161	2616	2430	1
chr16	70250341	70250342	chunk0076_302_1	18.1468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	70249976	70250386	-20087959	-	MER51-int	LTR	ERV1	-4870	2946	2515	1
chr16	70302798	70302799	chunk0076_306_1	5.12066	AR_DHT_Control	chr16	70302231	70303128	-20035217	-	L1ME1	LINE	L1	0	6179	5254	1
chr16	70715297	70715298	chunk0076_326_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	70715164	70715474	-19622871	+	L2b	LINE	L2	3028	3369	-6	1
chr16	71505506	71505507	chunk0076_341_1	8.99599	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	71505258	71505791	-18832554	+	L1MB5	LINE	L1	5643	6174	0	1
chr16	71618239	71618240	chunk0076_347_1	8.27376	AR_DHT_Control	chr16	71618002	71618423	-18719922	+	L1ME4b	LINE	L1	460	780	-112	1
chr16	72001740	72001741	chunk0076_366_1	93.1564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	72001424	72001967	-18336378	-	Charlie29a	DNA	hAT-Charlie	-135	584	1	1
chr16	72156800	72156801	chunk0076_371_1	9.21264	AR_DHT_Control	chr16	72156633	72156811	-18181534	-	L1ME1	LINE	L1	-346	5833	5657	1
chr16	72413170	72413171	chunk0076_385_1	27.13835	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72413142	72413229	-17925116	+	AluYj4	SINE	Alu	225	311	0	1
chr16	72415595	72415596	chunk0076_387_1	14.95052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72415293	72416044	-17922301	-	L1MC4a	LINE	L1	-253	7629	6982	1
chr16	72479583	72479584	chunk0076_390_1	45.1193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	72479109	72479681	-17858664	+	L1MD1	LINE	L1	3823	4401	-1745	1
chr16	72481643	72481644	chunk0076_391_1	6.77976	AR_DHT_Control	chr16	72481466	72481873	-17856472	+	L1MD1	LINE	L1	5807	6242	0	1
chr16	72546529	72546530	chunk0076_394_1	35.5347	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72543204	72549689	-17788656	+	L1PA7	LINE	L1	1	6468	-1	1
chr16	72552811	72552812	chunk0076_395_1	15.8938	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72552483	72553151	-17785194	-	Cheshire	DNA	hAT-Charlie	-1723	697	6	1
chr16	72619563	72619564	chunk0076_399_1	12.8082	AR_DHT_Control	chr16	72619559	72619648	-17718697	+	Penelope1_Vert	LINE	Penelope	484	577	-510	1
chr16	72636124	72636125	chunk0076_400_1	9.01771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	72636098	72636351	-17701994	+	L1MEd	LINE	L1	700	976	-6110	1
chr16	72677992	72677993	chunk0076_406_1	295.4074	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72677927	72678453	-17659892	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	1
chr16	72773411	72773412	chunk0076_408_1	13.12162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	72773340	72773703	-17564642	-	MLT1B	LTR	ERVL-MaLR	0	390	1	1
chr16	72774117	72774118	chunk0076_410_1	16.4576	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	72774075	72775157	-17563188	-	L1MEg	LINE	L1	-5116	1307	95	1
chr16	72936371	72936372	chunk0076_419_1	47.12533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	72936304	72937385	-17400960	-	L2a	LINE	L2	-16	3410	2167	1
chr16	72968171	72968172	chunk0076_422_1	38.37845	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	72967942	72968455	-17369890	+	L1MC4	LINE	L1	7249	7769	-273	1
chr16	73846080	73846081	chunk0076_444_1	5.36932	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	73845810	73846097	-16492248	-	AluJo	SINE	Alu	-8	304	1	1
chr16	73866765	73866766	chunk0076_445_1	28.6482	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	73866686	73867159	-16471186	-	LTR16E1	LTR	ERVL	-1	537	19	1
chr16	73991094	73991095	chunk0076_447_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	73990752	73991549	-16346796	-	LTR1E	LTR	ERV1	0	804	2	1
chr16	74343637	74343638	chunk0076_456_1	84.3815	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	74343507	74343770	-15994575	-	L1MB3	LINE	L1	-38	6145	5873	1
chr16	74510789	74510790	chunk0077_6_1	6.48643	AR_DHT_Control	chr16	74510694	74511087	-15827258	-	L2b	LINE	L2	-12	3363	2971	1
chr16	74575672	74575673	chunk0077_8_1	41.2707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	74575595	74575731	-15762614	-	AluSx3	SINE	Alu	-9	302	167	1
chr16	74627773	74627774	chunk0077_9_1	43.31796	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	74627383	74627878	-15710467	+	MER54A	LTR	ERVL	391	897	-4	1
chr16	74781565	74781566	chunk0077_11_1	16.25293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	74781549	74781601	-15556744	-	L1ME1	LINE	L1	-15	6164	6110	1
chr16	75019457	75019458	chunk0077_17_1	28.1939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	75019420	75019718	-15318627	-	L1ME3E	LINE	L1	-3315	2831	2580	1
chr16	75120476	75120477	chunk0077_26_1	112.1257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	75120008	75120591	-15217754	+	MER4-int	LTR	ERV1	993	1553	-5045	1
chr16	75308287	75308288	chunk0077_30_1	63.8362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	75307991	75308437	-15029908	+	LTR16E1	LTR	ERVL	47	534	-4	1
chr16	75462597	75462598	chunk0077_37_1	29.08244	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	75462507	75462981	-14875364	+	L1MC4	LINE	L1	7408	7891	-151	1
chr16	75640818	75640819	chunk0077_42_1	17.4969	AR_DHT_Control	chr16	75640806	75640916	-14697429	-	MER58B	DNA	hAT-Charlie	-68	273	175	1
chr16	75784287	75784288	chunk0077_43_1	16.61131	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	75783507	75784881	-14553464	-	L1MA7	LINE	L1	-333	5958	4619	1
chr16	76005427	76005428	chunk0077_47_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	76005422	76005699	-14332646	+	L2	LINE	L2	1629	1900	-1519	1
chr16	76329026	76329027	chunk0077_53_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	76328935	76329050	-14009295	+	L1MC3	LINE	L1	7667	7777	-8	1
chr16	76439090	76439091	chunk0077_56_1	13.9359	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	76439083	76439205	-13899140	+	L2a	LINE	L2	3286	3426	0	1
chr16	76719503	76719504	chunk0077_60_1	11.6878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	76717832	76719957	-13618388	+	L1PB1	LINE	L1	4146	6313	-554	1
chr16	76794547	76794548	chunk0077_63_1	14.63622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	76794407	76794564	-13543781	-	AluSc8	SINE	Alu	-11	300	143	1
chr16	76859201	76859202	chunk0077_65_1	40.1732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	76858768	76860991	-13477354	+	L1PBa	LINE	L1	2946	5244	-1618	1
chr16	76956449	76956450	chunk0077_69_1	13.818	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	76956400	76956715	-13381630	+	LTR33	LTR	ERVL	37	371	-144	1
chr16	77130605	77130606	chunk0077_73_1	11.9298	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	77130582	77130686	-13207659	+	MIRb	SINE	MIR	45	153	-115	1
chr16	77178831	77178832	chunk0077_74_1	11.38091	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	77178672	77178999	-13159346	-	LTR37B	LTR	ERV1	-126	342	6	1
chr16	77183422	77183423	chunk0077_76_1	3.99987	AR_DHT_Control	chr16	77182943	77186378	-13151967	-	L1ME1	LINE	L1	-181	6171	2506	1
chr16	77353807	77353808	chunk0077_82_1	4.44156	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	77353749	77353819	-12984526	-	MamRTE1	LINE	RTE-BovB	-2185	1627	1559	1
chr16	77359207	77359208	chunk0077_83_1	119.0647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	77359149	77359208	-12979137	-	MIR	SINE	MIR	0	262	201	1
chr16	77608226	77608227	chunk0077_92_1	11.0308	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	77608036	77608245	-12730100	-	MER2	DNA	TcMar-Tigger	-119	226	3	1
chr16	78231118	78231119	chunk0077_111_1	4.28283	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	78231116	78231156	-12107189	+	(TTTGT)n	Simple_repeat	Simple_repeat	1	40	0	1
chr16	78258724	78258725	chunk0077_116_1	17.54322	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	78258707	78258733	-12079612	+	(A)n	Simple_repeat	Simple_repeat	1	26	0	1
chr16	78340821	78340822	chunk0077_120_1	11.1716	AR_DHT_Control	chr16	78340508	78340873	-11997472	-	HAL1	LINE	L1	-1635	872	503	1
chr16	78362747	78362748	chunk0077_121_1	12.1886	AR_DHT_Control	chr16	78362731	78362886	-11975459	-	MIRb	SINE	MIR	0	268	108	1
chr16	78473141	78473142	chunk0077_127_1	139.341	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	78473135	78473416	-11864929	-	AluSz	SINE	Alu	-18	294	14	1
chr16	78675461	78675462	chunk0077_137_1	61.4198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	78675448	78675532	-11662813	-	MIR	SINE	MIR	-5	257	175	1
chr16	78692920	78692921	chunk0077_141_1	8.18895	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	78692733	78692945	-11645400	+	Charlie16a	DNA	hAT-Charlie	4	215	-127	1
chr16	79327926	79327927	chunk0077_164_1	49.8968	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79327922	79328117	-11010228	+	MIRb	SINE	MIR	41	241	-27	1
chr16	79416365	79416366	chunk0077_168_1	29.7334	AR_DHT_Control	chr16	79416292	79416369	-10921976	-	L2b	LINE	L2	-1	3374	3299	1
chr16	79440837	79440838	chunk0077_171_1	28.01227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79440733	79440874	-10897471	+	Chap1_Mam	DNA	hAT-Charlie	83	218	-124	1
chr16	79632496	79632497	chunk0077_176_1	27.69561	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	79632359	79632531	-10705814	-	L2c	LINE	L2	-1	3386	3202	1
chr16	79678198	79678199	chunk0077_182_1	22.85599	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79677890	79678562	-10659783	-	L1ME2z	LINE	L1	-477	6140	5416	1
chr16	79745947	79745948	chunk0077_187_1	15.63437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	79745855	79746007	-10592338	+	L2a	LINE	L2	3283	3422	-4	1
chr16	79809445	79809446	chunk0077_197_1	63.684	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79809125	79809554	-10528791	-	L3	LINE	CR1	-359	3740	3292	1
chr16	79850567	79850568	chunk0077_199_1	20.93783	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79850476	79850712	-10487633	+	MIR	SINE	MIR	2	261	-1	1
chr16	79888274	79888275	chunk0077_206_1	93.0036	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	79888130	79888405	-10449940	+	AmnSINE1	SINE	5S-Deu-L2	225	550	-25	1
chr16	80014361	80014362	chunk0077_213_1	14.28827	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80014111	80014416	-10323929	+	MER113	DNA	hAT-Charlie	19	332	-189	1
chr16	80148016	80148017	chunk0077_215_1	5.6503	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80147580	80148119	-10190226	+	L2a	LINE	L2	2836	3426	0	1
chr16	80248915	80248916	chunk0077_223_1	15.8753	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80248909	80249053	-10089292	-	MER113	DNA	hAT-Charlie	-332	189	52	1
chr16	80414365	80414366	chunk0077_226_1	16.09149	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80414044	80414575	-9923770	+	L2c	LINE	L2	2802	3387	0	1
chr16	80563201	80563202	chunk0077_232_1	14.65524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80563196	80563515	-9774830	+	LTR16A2	LTR	ERVL	127	448	-47	1
chr16	80672369	80672370	chunk0077_238_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80672353	80672377	-9665968	+	(GA)n	Simple_repeat	Simple_repeat	1	24	0	1
chr16	80718402	80718403	chunk0077_242_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	80718357	80718524	-9619821	-	MIRb	SINE	MIR	-57	211	27	1
chr16	80867738	80867739	chunk0077_250_1	38.7795	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	80866257	80868600	-9469745	+	L1PA16	LINE	L1	3780	6157	-9	1
chr16	80870979	80870980	chunk0077_251_1	19.3853	AR_DHT_Control	chr16	80870842	80871045	-9467300	-	L1PA10	LINE	L1	-10	6158	5941	1
chr16	80909966	80909967	chunk0077_257_1	82.1926	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	80909908	80909999	-9428346	+	Charlie22a	DNA	hAT-Charlie	378	471	-20	1
chr16	80934771	80934772	chunk0077_259_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	80933922	80934788	-9403557	+	L2b	LINE	L2	2358	3281	-106	1
chr16	80956793	80956794	chunk0077_263_1	18.9087	AR_DHT_Control	chr16	80955355	80959515	-9378830	+	L1PA13	LINE	L1	1261	5471	-1295	1
chr16	80991242	80991243	chunk0077_266_1	12.0327	AR_DHT_Control	chr16	80991053	80991353	-9346992	+	L1MC3	LINE	L1	6899	7229	-556	1
chr16	80992013	80992014	chunk0077_268_1	64.5958	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	80992006	80992188	-9346157	+	L1MC2	LINE	L1	6136	6331	-13	1
chr16	80994717	80994718	chunk0077_270_1	25.73812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	80993824	80994863	-9343482	+	L1ME1	LINE	L1	4615	5694	-485	1
chr16	81067383	81067384	chunk0077_276_1	46.755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	81067277	81067428	-9270917	+	L1MC5	LINE	L1	9131	9291	-13	1
chr16	81213401	81213402	chunk0077_282_1	19.2046	AR_DHT_Control	chr16	81213265	81213563	-9124782	+	L1ME3Cz	LINE	L1	392	697	-300	1
chr16	81241930	81241931	chunk0077_287_1	32.21862	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	81241869	81242033	-9096312	+	MIR	SINE	MIR	61	231	-31	1
chr16	81329742	81329743	chunk0077_289_1	8.8907	AR_DHT_Control	chr16	81329413	81330261	-9008084	+	L2	LINE	L2	1824	2827	-592	1
chr16	81581432	81581433	chunk0077_299_1	14.38497	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	81581252	81581598	-8756747	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	1
chr16	81584280	81584281	chunk0077_300_1	53.40115	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	81584228	81584370	-8753975	+	L2a	LINE	L2	3296	3425	-1	1
chr16	81768331	81768332	chunk0077_304_1	20.08584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	81768175	81768552	-8569793	-	L1ME1	LINE	L1	-289	5890	5492	1
chr16	81901699	81901700	chunk0077_309_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	81901544	81901981	-8436364	+	Charlie4a	DNA	hAT-Charlie	18	500	-8	1
chr16	82016404	82016405	chunk0077_310_1	18.56424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	82016376	82016818	-8321527	-	LTR16C	LTR	ERVL	0	489	17	1
chr16	82040457	82040458	chunk0077_314_1	7.06178	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	82040437	82040528	-8297817	-	MIR	SINE	MIR	-166	96	11	1
chr16	82138771	82138772	chunk0077_317_1	5.6425	AR_DHT_Control	chr16	82138495	82138996	-8199349	+	MER89	LTR	ERV1	1	537	-22	1
chr16	82196265	82196266	chunk0077_323_1	26.66263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	82195704	82196270	-8142075	+	Merlin1_HS	DNA	Merlin	613	1172	-3	1
chr16	82318227	82318228	chunk0077_327_1	4.46365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	82318222	82318772	-8019573	+	MER77	LTR	ERVL	1	598	-6	1
chr16	82322367	82322368	chunk0077_328_1	5.77445	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	82319762	82322636	-8015709	-	L1M2	LINE	L1	-502	7217	4213	1
chr16	82325068	82325069	chunk0077_329_1	14.43885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	82324906	82325115	-8013230	-	MER58A	DNA	hAT-Charlie	-1	223	9	1
chr16	82332201	82332202	chunk0077_331_1	6.62784	AR_DHT_Control	chr16	82332099	82332218	-8006127	+	MIRb	SINE	MIR	133	265	-3	1
chr16	82358759	82358760	chunk0077_332_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	82358371	82358893	-7979452	+	MLT1D	LTR	ERVL-MaLR	1	503	-2	1
chr16	82515651	82515652	chunk0077_334_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	82515630	82515795	-7822550	-	Charlie15a	DNA	hAT-Charlie	-37	187	1	1
chr16	83077943	83077944	chunk0077_343_1	43.05854	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	83077492	83078033	-7260312	-	L1ME2z	LINE	L1	-571	5873	5298	1
chr16	83300403	83300404	chunk0077_344_1	40.19877	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	83300363	83300498	-7037847	-	MIRc	SINE	MIR	-20	248	109	1
chr16	83814033	83814034	chunk0077_355_1	6.48643	AR_DHT_Control	chr16	83813795	83814089	-6524256	+	Tigger16a	DNA	TcMar-Tigger	632	955	-2	1
chr16	84048486	84048487	chunk0077_357_1	12.08314	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	84048152	84048672	-6289673	-	L1MB7	LINE	L1	-48	6136	5566	1
chr16	84212059	84212060	chunk0077_365_1	20.3752	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	84211566	84212061	-6126284	+	MLT1K	LTR	ERVL-MaLR	99	592	-3	1
chr16	84511584	84511585	chunk0077_371_1	4.9436	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	84511579	84512143	-5826202	-	L1MC3	LINE	L1	-20	7765	7174	1
chr16	84540448	84540449	chunk0077_373_1	52.1548	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	84540090	84540574	-5797771	-	LTR40a	LTR	ERVL	-2	517	1	1
chr16	84672582	84672583	chunk0077_380_1	11.8204	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	84672511	84672674	-5665671	+	MER5A	DNA	hAT-Charlie	1	152	-37	1
chr16	84698265	84698266	chunk0077_381_1	31.3906	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	84698125	84698555	-5639790	-	L1MC4	LINE	L1	0	8042	7595	1
chr16	84722133	84722134	chunk0077_385_1	31.84873	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	84721995	84722569	-5615776	-	L1ME1	LINE	L1	-73	6106	5487	1
chr16	84823350	84823351	chunk0077_394_1	10.4948	AR_DHT_Control	chr16	84822846	84823431	-5514914	-	L1MB7	LINE	L1	-10	6174	5584	1
chr16	84913471	84913472	chunk0077_397_1	198.902	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	84913319	84913583	-5424762	-	L1MC4	LINE	L1	-454	7588	7321	1
chr16	84914438	84914439	chunk0077_398_1	90.4871	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	84913875	84914579	-5423766	-	L1MC4	LINE	L1	-580	7415	6753	1
chr16	84945325	84945326	chunk0077_401_1	77.70287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	84945103	84945439	-5392906	+	L1MC4	LINE	L1	6797	7185	-857	1
chr16	85351187	85351188	chunk0077_425_1	23.73998	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	85351154	85351241	-4987104	-	MLT1J1	LTR	ERVL-MaLR	-354	90	4	1
chr16	85563791	85563792	chunk0077_432_1	4.27166	AR_DHT_Control	chr16	85563742	85563836	-4774509	-	L3b	LINE	CR1	-4	5228	5132	1
chr16	85564199	85564200	chunk0077_433_1	6.49645	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	85564122	85564288	-4774057	-	L2c	LINE	L2	-169	3218	3051	1
chr16	85753723	85753724	chunk0077_445_1	6.6468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	85753667	85753836	-4584509	-	MER5B	DNA	hAT-Charlie	0	178	33	1
chr16	85770857	85770858	chunk0077_446_1	11.1716	AR_DHT_Control	chr16	85770511	85771112	-4567233	+	L1ME3	LINE	L1	5488	6165	-8	1
chr16	85867959	85867960	chunk0077_450_1	7.82111	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	85867809	85868217	-4470128	+	MER83	LTR	ERV1	3	448	0	1
chr16	86100425	86100426	chunk0078_343_1	27.96818	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	86100396	86100613	-4237732	+	MER58A	DNA	hAT-Charlie	2	224	0	1
chr16	86180721	86180722	chunk0078_344_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	86180598	86181190	-4157155	+	(CA)n	Simple_repeat	Simple_repeat	1	607	0	1
chr16	86256462	86256463	chunk0078_345_1	6.94032	SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	86254734	86257345	-4081000	-	L1MDa	LINE	L1	-3996	2637	15	1
chr16	86366671	86366672	chunk0078_346_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	86366572	86367021	-3971324	-	L1ME4a	LINE	L1	-395	5729	5258	1
chr16	86424278	86424279	chunk0078_348_1	29.0253	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	86424153	86424475	-3913870	-	MER58B	DNA	hAT-Charlie	-3	338	2	1
chr16	86614921	86614922	chunk0078_351_1	6.33484	AR_DHT_Control	chr16	86614814	86615171	-3723174	-	MLT1I	LTR	ERVL-MaLR	-1	410	12	1
chr16	86657998	86657999	chunk0078_352_1	4.75321	AR_DHT_Control	chr16	86657861	86658068	-3680277	-	Charlie1a	DNA	hAT-Charlie	-1207	248	36	1
chr16	87231264	87231265	chunk0078_356_1	12.24065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87230958	87231409	-3106936	+	L1ME4b	LINE	L1	372	790	-102	1
chr16	87281573	87281574	chunk0078_357_1	14.9958	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87281229	87281620	-3056725	+	L1M4	LINE	L1	4930	5313	-833	1
chr16	87369476	87369477	chunk0078_365_1	10.4518	AR_DHT_Control	chr16	87369171	87369777	-2968568	-	L1MB3	LINE	L1	-1	6182	5547	1
chr16	87379445	87379446	chunk0078_367_1	57.55431	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr16	87379238	87379688	-2958657	+	LTR22A	LTR	ERVK	1	455	-3	1
chr16	87438420	87438421	chunk0078_370_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87437932	87438489	-2899856	+	Kanga1d	DNA	TcMar-Tc2	11	488	-121	1
chr16	87474875	87474876	chunk0078_371_1	14.32548	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr16	87474475	87475269	-2863076	+	L1ME2z	LINE	L1	72	930	-5206	1
chr16	87616807	87616808	chunk0078_376_1	17.33585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87616560	87616942	-2721403	-	L1MD1	LINE	L1	0	6242	5819	1
chr16	87789045	87789046	chunk0078_384_1	16.10692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87789023	87789195	-2549150	+	L1M5	LINE	L1	4432	4586	-1560	1
chr16	87864868	87864869	chunk0078_386_1	35.3321	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	87864599	87865066	-2473279	-	LTR22B	LTR	ERVK	-17	475	1	1
chr16	88763493	88763494	chunk0078_404_1	16.3595	AR_DHT_Control	chr16	88763396	88763532	-1574813	+	FLAM_C	SINE	Alu	1	133	-10	1
chr16	88944858	88944859	chunk0078_408_1	11.2868	AR_DHT_Control	chr16	88944779	88944974	-1393371	-	MIR	SINE	MIR	-27	241	33	1
chr16	89125951	89125952	chunk0078_411_1	11.1716	AR_DHT_Control	chr16	89125936	89125974	-1212371	-	L1MEf	LINE	L1	-1617	4529	4492	1
chr16	89240904	89240905	chunk0078_414_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	89240833	89240911	-1097434	+	L1MEf	LINE	L1	5357	5425	-1119	1
chr16	89261857	89261858	chunk0078_416_1	117.2395	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	89261459	89262157	-1076188	-	L1M4	LINE	L1	-6334	1183	360	1
chr16	89313943	89313944	chunk0078_421_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr16	89313930	89313957	-1024388	+	A-rich	Low_complexity	Low_complexity	1	25	0	1
chr16	89345774	89345775	chunk0078_422_1	303.1601	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	89345622	89345961	-992384	+	L1M5	LINE	L1	2148	2503	-3643	1
chr16	89375018	89375019	chunk0078_424_1	7.24914	AR_DHT_Control	chr16	89374790	89375298	-963047	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	541	-527	1
chr16	89535080	89535081	chunk0078_441_1	12.5164	AR_DHT_Control	chr16	89535060	89535172	-803173	-	L1MD3	LINE	L1	-488	7554	7436	1
chr16	89609877	89609878	chunk0078_443_1	12.1886	AR_DHT_Control	chr16	89609665	89609887	-728458	+	AluSx	SINE	Alu	86	308	-4	1
chr16	89682228	89682229	chunk0078_445_1	42.08122	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr16	89682032	89682446	-655899	+	MER4-int	LTR	ERV1	4807	5443	-1155	1
chr16	89803156	89803157	chunk0078_448_1	6.48643	AR_DHT_Control	chr16	89802702	89803176	-535169	+	L1MA5A	LINE	L1	5815	6286	-11	1
chr16	89909848	89909849	chunk0078_450_1	17.4407	AR_DHT_Control	chr16	89909698	89909864	-428481	-	L2c	LINE	L2	-228	3159	2996	1
chr17	144072	144073	chunk0078_2_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	144062	144111	-83113330	+	(GGCGCGGC)n	Simple_repeat	Simple_repeat	1	51	0	1
chr17	434875	434876	chunk0078_14_1	207.1145	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	434672	435138	-82822303	-	L1M5	LINE	L1	-1490	4656	4183	1
chr17	699711	699712	chunk0078_17_1	17.30971	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	699550	699744	-82557697	+	MER58A	DNA	hAT-Charlie	28	224	0	1
chr17	767282	767283	chunk0078_21_1	10.1791	AR_DHT_Control	chr17	767235	767308	-82490133	-	L2a	LINE	L2	-1	3425	3352	1
chr17	837435	837436	chunk0078_25_1	32.28703	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	837435	837472	-82419969	+	MIRb	SINE	MIR	221	258	-10	1
chr17	855788	855789	chunk0078_28_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	855364	855912	-82401529	-	L4_A_Mam	LINE	RTE-X	-2702	2288	1688	1
chr17	925252	925253	chunk0078_35_1	7.34658	AR_DHT_Control	chr17	925237	925291	-82332150	-	L3	LINE	CR1	-85	4014	3961	1
chr17	1167744	1167745	chunk0078_45_1	33.52649	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	1167665	1167748	-82089693	+	MIRb	SINE	MIR	151	232	-36	1
chr17	1226703	1226704	chunk0078_48_1	11.0426	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	1226355	1226886	-82030555	+	(TGCATG)n	Simple_repeat	Simple_repeat	1	561	0	1
chr17	1413537	1413538	chunk0078_53_1	11.022	AR_DHT_Control	chr17	1413277	1413630	-81843811	+	MLT1H	LTR	ERVL-MaLR	153	547	-2	1
chr17	1433995	1433996	chunk0078_55_1	31.2841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	1433851	1433999	-81823442	-	AluJb	SINE	Alu	-168	144	1	1
chr17	1452303	1452304	chunk0078_56_1	7.74643	AR_DHT_Control	chr17	1452109	1452364	-81805077	+	MIR	SINE	MIR	8	260	-2	1
chr17	1491549	1491550	chunk0078_63_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	1491528	1491590	-81765851	+	(GCTCCCC)n	Simple_repeat	Simple_repeat	1	66	0	1
chr17	1504676	1504677	chunk0078_65_1	58.1412	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	1504550	1504738	-81752703	+	MIRb	SINE	MIR	18	222	-46	1
chr17	1669747	1669748	chunk0078_76_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	1669404	1670479	-81586962	+	L2	LINE	L2	1708	2690	-729	1
chr17	1977047	1977048	chunk0078_83_1	54.16968	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	1977022	1977269	-81280172	+	MER113	DNA	hAT-Charlie	273	519	-2	1
chr17	2018799	2018800	chunk0078_91_1	7.66459	AR_DHT_Control	chr17	2018603	2018864	-81238577	+	MIRb	SINE	MIR	1	265	-3	1
chr17	2101742	2101743	chunk0078_99_1	6.01382	AR_DHT_Control	chr17	2101667	2101891	-81155550	-	MIR	SINE	MIR	-4	258	36	1
chr17	2338542	2338543	chunk0078_104_1	6.01382	AR_DHT_Control	chr17	2338538	2338671	-80918770	+	L2a	LINE	L2	3268	3423	-3	1
chr17	2395968	2395969	chunk0078_108_1	37.39313	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	2395919	2396052	-80861389	-	MIR1_Amn	SINE	MIR	-9	221	81	1
chr17	2602631	2602632	chunk0078_113_1	4.83532	AR_DHT_Control	chr17	2602433	2602729	-80654712	+	L2	LINE	L2	2554	2860	-559	1
chr17	2626972	2626973	chunk0078_114_1	10.6287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	2626852	2630855	-80626586	-	L1PBa	LINE	L1	-752	6110	2054	1
chr17	2909150	2909151	chunk0078_117_1	4.88663	AR_DHT_Control	chr17	2909000	2909451	-80347990	-	L2c	LINE	L2	-997	2422	1884	1
chr17	2952485	2952486	chunk0078_120_1	16.44629	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	2952308	2952797	-80304644	-	L1M5	LINE	L1	-323	5801	5327	1
chr17	2955331	2955332	chunk0078_121_1	7.83165	AR_DHT_Control	chr17	2954896	2955590	-80301851	-	L1MB5	LINE	L1	-284	5890	5182	1
chr17	2975943	2975944	chunk0078_124_1	6.48643	AR_DHT_Control	chr17	2975524	2975946	-80281495	+	LTR79	LTR	ERVL	10	514	-13	1
chr17	3757412	3757413	chunk0078_138_1	5.9324	AR_DHT_Control	chr17	3757170	3757479	-79499962	+	L2b	LINE	L2	2852	3155	-220	1
chr17	3890762	3890763	chunk0078_141_1	45.1904	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	3890665	3890852	-79366589	+	L2b	LINE	L2	2940	3162	-213	1
chr17	3895191	3895192	chunk0078_143_1	5.21805	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	3895035	3895359	-79362082	-	L2b	LINE	L2	-1266	2153	1826	1
chr17	4010847	4010848	chunk0078_148_1	74.0374	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	4010754	4010882	-79246559	+	L1ME4a	LINE	L1	5888	6016	-108	1
chr17	4234122	4234123	chunk0078_160_1	21.0808	AR_DHT_Control	chr17	4233922	4234269	-79023172	+	Tigger3a	DNA	TcMar-Tigger	1	332	-16	1
chr17	4343057	4343058	chunk0078_170_1	187.1764	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	4342597	4343190	-78914251	+	L2a	LINE	L2	2600	3426	0	1
chr17	4350577	4350578	chunk0078_172_1	61.1677	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	4350476	4350606	-78906835	-	L4_A_Mam	LINE	RTE-X	-1020	3970	3837	1
chr17	4415286	4415287	chunk0078_174_1	12.0416	AR_DHT_Control	chr17	4415223	4415315	-78842126	-	L1MB7	LINE	L1	-2276	3870	3784	1
chr17	4643809	4643810	chunk0078_177_1	23.5339	AR_DHT_Control	chr17	4643706	4644388	-78613053	-	L1ME4b	LINE	L1	-5	887	140	1
chr17	4677571	4677572	chunk0078_180_1	20.69046	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	4677330	4677646	-78579795	+	Charlie4a	DNA	hAT-Charlie	1	323	-185	1
chr17	4757333	4757334	chunk0078_187_1	58.4341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	4757301	4757429	-78500012	+	L2a	LINE	L2	3301	3420	-6	1
chr17	5184881	5184882	chunk0078_193_1	8.27376	AR_DHT_Control	chr17	5184719	5184924	-78072517	-	LTR41C	LTR	ERVL	-504	197	1	1
chr17	5232379	5232380	chunk0078_195_1	115.1817	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	5232151	5232618	-78024823	+	LTR85a	LTR	Gypsy?	279	697	-5	1
chr17	5263049	5263050	chunk0078_198_1	44.6116	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	5262945	5263069	-77994372	-	L1MC4	LINE	L1	-1	8041	7914	1
chr17	5299185	5299186	chunk0078_201_1	19.02122	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	5299160	5299372	-77958069	-	L1MC3	LINE	L1	-1061	8243	8003	1
chr17	5306202	5306203	chunk0078_202_1	7.36432	AR_DHT_Control	chr17	5306053	5306237	-77951204	-	Tigger5b	DNA	TcMar-Tigger	-2	470	270	1
chr17	5353043	5353044	chunk0078_204_1	67.57005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	5352890	5353056	-77904385	-	MIR	SINE	MIR	-9	253	92	1
chr17	5436405	5436406	chunk0078_208_1	36.2119	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	5436339	5436737	-77820704	+	L1MB7	LINE	L1	4936	5308	-838	1
chr17	5467378	5467379	chunk0078_209_1	8.85862	AR_DHT_Control	chr17	5467039	5467418	-77790023	+	LTR19-int	LTR	ERV1	5205	5586	0	1
chr17	5929110	5929111	chunk0078_210_1	4.96282	AR_DHT_Control	chr17	5928372	5929206	-77328235	+	L2c	LINE	L2	2421	3328	-59	1
chr17	6233582	6233583	chunk0078_217_1	4.46365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	6233390	6233692	-77023749	+	(AC)n	Simple_repeat	Simple_repeat	1	302	0	1
chr17	6326698	6326699	chunk0078_218_1	7.86105	AR_DHT_Control	chr17	6326653	6326822	-76930619	+	(CACATA)n	Simple_repeat	Simple_repeat	2	159	0	1
chr17	6438155	6438156	chunk0078_221_1	11.8363	AR_DHT_Control	chr17	6438096	6438166	-76819275	+	L1ME3B	LINE	L1	6094	6165	-77	1
chr17	6445664	6445665	chunk0078_222_1	6.20921	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	6445614	6445813	-76811628	-	L2c	LINE	L2	-125	3262	3058	1
chr17	6494902	6494903	chunk0078_224_1	27.958	AR_DHT_Control	chr17	6494522	6495217	-76762224	+	L1ME4b	LINE	L1	98	829	-63	1
chr17	6512849	6512850	chunk0078_225_1	43.61552	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	6512718	6512938	-76744503	+	LTR86A1	LTR	ERVL	27	252	-261	1
chr17	6603639	6603640	chunk0078_232_1	17.7265	AR_DHT_Control	chr17	6603493	6603911	-76653530	+	L1MDa	LINE	L1	17	443	-6190	1
chr17	6672682	6672683	chunk0078_233_1	9.8425	AR_DHT_Control	chr17	6672584	6672775	-76584666	-	L1ME4a	LINE	L1	-218	5906	5695	1
chr17	6683415	6683416	chunk0078_235_1	55.19145	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	6682865	6683429	-76574012	+	MLT1L	LTR	ERVL-MaLR	6	596	-14	1
chr17	6700321	6700322	chunk0078_239_1	67.40215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	6700320	6700377	-76557064	+	L2b	LINE	L2	3318	3371	-4	1
chr17	7088552	7088553	chunk0078_245_1	51.8426	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	7088332	7089145	-76168296	+	LTR5B	LTR	ERVK	1	829	-173	1
chr17	7159851	7159852	chunk0078_249_1	55.1876	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	7159071	7160057	-76097384	+	LTR5B	LTR	ERVK	1	1002	0	1
chr17	7228286	7228287	chunk0078_251_1	177.8372	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	7228207	7228565	-76028876	+	L1ME3B	LINE	L1	5837	6200	-42	1
chr17	7255093	7255094	chunk0078_256_1	472.6727	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	7255025	7255239	-76002202	-	L2c	LINE	L2	0	3387	3179	1
chr17	7267057	7267058	chunk0078_257_1	52.3361	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	7266728	7267162	-75990279	+	L2a	LINE	L2	2954	3387	0	1
chr17	7940932	7940933	chunk0078_277_1	28.0752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	7940830	7941042	-75316399	-	MER58A	DNA	hAT-Charlie	0	224	3	1
chr17	7959686	7959687	chunk0078_279_1	112.81461	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	7959463	7959754	-75297687	-	Zaphod	DNA	hAT-Tip100	-3211	820	512	1
chr17	8032129	8032130	chunk0078_283_1	45.9747	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	8032109	8032233	-75225208	+	FLAM_A	SINE	Alu	1	124	-18	1
chr17	8068242	8068243	chunk0078_293_1	26.476	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	8068178	8068308	-75189133	-	MamRep564	Unknown	Unknown	-125	232	94	1
chr17	8211290	8211291	chunk0078_302_1	5.82105	AR_DHT_Control	chr17	8211119	8211365	-75046076	-	L1M5	LINE	L1	-1135	5011	4760	1
chr17	8262363	8262364	chunk0078_303_1	26.8741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	8262030	8262488	-74994953	-	L1ME4b	LINE	L1	-248	644	284	1
chr17	8281026	8281027	chunk0078_305_1	6.48643	AR_DHT_Control	chr17	8281017	8281400	-74976041	-	MER21C	LTR	ERVL	-405	533	124	1
chr17	8332778	8332779	chunk0078_310_1	16.53401	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	8332555	8333043	-74924398	-	MLT1N2	LTR	ERVL-MaLR	0	562	102	1
chr17	8510819	8510820	chunk0078_318_1	26.1057	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	8510795	8510884	-74746557	+	MamRep137	DNA	TcMar-Tigger	189	281	-229	1
chr17	8593985	8593986	chunk0078_325_1	23.00529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	8592971	8594174	-74663267	+	L1MC	LINE	L1	3765	5007	-1139	1
chr17	8603101	8603102	chunk0078_327_1	4.96282	AR_DHT_Control	chr17	8603038	8603333	-74654108	-	L3	LINE	CR1	-697	3402	3084	1
chr17	8611373	8611374	chunk0078_329_1	43.7623	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	8611023	8611377	-74646064	+	L1ME3B	LINE	L1	549	911	-5504	1
chr17	8614907	8614908	chunk0078_331_1	6.69534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	8614616	8615011	-74642430	+	L1ME3B	LINE	L1	3045	3611	-2708	1
chr17	8693046	8693047	chunk0078_333_1	18.74654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	8692992	8693146	-74564295	+	L1MC5a	LINE	L1	2638	2775	-2	1
chr17	8707576	8707577	chunk0078_334_1	8.21408	AR_DHT_Control	chr17	8707440	8707649	-74549792	+	L4_A_Mam	LINE	RTE-X	4389	4603	-387	1
chr17	8794195	8794196	chunk0078_335_1	11.6447	AR_DHT_Control	chr17	8794071	8794315	-74463126	+	MIR	SINE	MIR	5	259	-3	1
chr17	8985565	8985566	chunk0078_339_1	64.15983	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	8984868	8986031	-74271410	+	L1M4	LINE	L1	15	1281	-6236	1
chr17	9142936	9142937	chunk0079_4_1	6.5005	AR_DHT_Control	chr17	9142914	9143099	-74114342	-	L2a	LINE	L2	-141	3285	3076	1
chr17	9669752	9669753	chunk0079_16_1	101.9107	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	9669475	9670039	-73587402	-	L2b	LINE	L2	-2	3424	2796	1
chr17	9705949	9705950	chunk0079_20_1	104.57263	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	9705787	9706600	-73550841	-	L1ME4b	LINE	L1	-441	451	21	1
chr17	10126417	10126418	chunk0079_33_1	5.90945	AR_DHT_Control	chr17	10126318	10126642	-73130799	+	(CA)n	Simple_repeat	Simple_repeat	1	324	0	1
chr17	10293848	10293849	chunk0079_39_1	16.12445	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	10293776	10294191	-72963250	-	MER63B	DNA	hAT-Blackjack	0	436	1	1
chr17	10380674	10380675	chunk0079_43_1	27.7192	AR_DHT_Control	chr17	10380535	10380681	-72876760	-	MIRc	SINE	MIR	-115	153	2	1
chr17	10500154	10500155	chunk0079_44_1	47.5645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	10500127	10500263	-72757178	+	MIR1_Amn	SINE	MIR	94	255	-13	1
chr17	10968127	10968128	chunk0079_59_1	37.5105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	10968049	10968573	-72288868	+	L1PA16	LINE	L1	385	907	-5515	1
chr17	10972198	10972199	chunk0079_60_1	6.25666	AR_DHT_Control	chr17	10971959	10972217	-72285224	+	L1MC3	LINE	L1	5422	5681	-838	1
chr17	11205427	11205428	chunk0079_65_1	20.99416	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	11205331	11205537	-72051904	+	L2c	LINE	L2	3137	3410	-16	1
chr17	11365989	11365990	chunk0079_69_1	28.15009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	11365701	11366160	-71891281	-	L2a	LINE	L2	-35	3391	2882	1
chr17	11530043	11530044	chunk0079_72_1	130.1168	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	11529648	11530266	-71727175	+	L1M5	LINE	L1	5107	5777	-347	1
chr17	11615149	11615150	chunk0079_78_1	40.8455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	11615091	11615246	-71642195	+	MER63B	DNA	hAT-Blackjack	285	436	0	1
chr17	11867694	11867695	chunk0079_83_1	80.0392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	11867197	11867747	-71389694	-	HAL1	LINE	L1	-1172	1335	764	1
chr17	11885276	11885277	chunk0079_87_1	5.20246	AR_DHT_Control	chr17	11885049	11885298	-71372143	-	L2b	LINE	L2	0	3387	3145	1
chr17	12100351	12100352	chunk0079_99_1	8.27376	AR_DHT_Control	chr17	12100047	12103024	-71154417	-	L1ME1	LINE	L1	-2	6177	3177	1
chr17	12374601	12374602	chunk0079_111_1	184.4885	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	12373967	12375241	-70882200	-	L1MEj	LINE	L1	-3117	3029	1533	1
chr17	12383530	12383531	chunk0079_113_1	25.65704	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	12383516	12383599	-70873842	+	MER2	DNA	TcMar-Tigger	136	223	-122	1
chr17	12404685	12404686	chunk0079_115_1	7.3092	AR_DHT_Control	chr17	12404584	12404861	-70852580	-	L2c	LINE	L2	-177	3198	2920	1
chr17	12492597	12492598	chunk0079_120_1	36.78842	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	12492373	12493355	-70764086	+	L1MD2	LINE	L1	5331	6340	-19	1
chr17	12574716	12574717	chunk0079_124_1	20.7477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	12574377	12575030	-70682411	-	L1ME4a	LINE	L1	-2210	3936	3231	1
chr17	12575705	12575706	chunk0079_126_1	23.8396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	12575119	12575992	-70681449	-	L1ME4a	LINE	L1	-2998	3148	2229	1
chr17	12726369	12726370	chunk0079_132_1	12.0334	AR_DHT_Control	chr17	12726260	12726407	-70531034	-	MER58A	DNA	hAT-Charlie	-64	160	1	1
chr17	13146445	13146446	chunk0079_144_1	5.44741	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	13146331	13147021	-70110420	-	L1MC	LINE	L1	-2358	3788	3006	1
chr17	13160027	13160028	chunk0079_146_1	151.6468	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	13159818	13160095	-70097346	+	L2a	LINE	L2	3084	3387	-39	1
chr17	13181835	13181836	chunk0079_148_1	34.07895	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	13181627	13182068	-70075373	-	LTR54B	LTR	ERV1	-4	494	1	1
chr17	13187966	13187967	chunk0079_150_1	5.28628	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	13187593	13187976	-70069465	+	L1M5	LINE	L1	4657	5056	-1090	1
chr17	13311470	13311471	chunk0079_156_1	13.04054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	13311205	13311512	-69945929	+	HAL1ME	LINE	L1	11	297	-2168	1
chr17	13387363	13387364	chunk0079_157_1	11.1716	AR_DHT_Control	chr17	13386578	13387482	-69869959	-	MER21C	LTR	ERVL	-5	933	1	1
chr17	13528509	13528510	chunk0079_162_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	13528279	13528658	-69728783	+	ERV3-16A3_LTR	LTR	ERVL	1	412	-10	1
chr17	13565755	13565756	chunk0079_164_1	5.73033	AR_DHT_Control	chr17	13565561	13565856	-69691585	-	L1MEd	LINE	L1	-5252	1834	1530	1
chr17	13990267	13990268	chunk0079_175_1	199.9857	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	13990217	13990311	-69267130	+	LTR16	LTR	ERVL	50	144	-294	1
chr17	14097941	14097942	chunk0079_182_1	26.79172	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	14097882	14098077	-69159364	-	MER2	DNA	TcMar-Tigger	-139	206	9	1
chr17	14115086	14115087	chunk0079_184_1	16.9805	AR_DHT_Control	chr17	14114915	14115106	-69142335	+	L2c	LINE	L2	3184	3386	-1	1
chr17	14218338	14218339	chunk0079_191_1	19.91706	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	14218260	14218361	-69039080	-	L1ME3B	LINE	L1	-180	6062	5974	1
chr17	14417649	14417650	chunk0079_201_1	33.2311	AR_DHT_Control	chr17	14417471	14417863	-68839578	-	MER57C2	LTR	ERV1	0	434	1	1
chr17	14706149	14706150	chunk0079_210_1	8.27376	AR_DHT_Control	chr17	14705583	14706376	-68551065	-	L1MC5a	LINE	L1	-283	2494	1733	1
chr17	14794520	14794521	chunk0079_212_1	8.90491	AR_DHT_Control	chr17	14794263	14794652	-68462789	+	L2b	LINE	L2	3011	3373	-2	1
chr17	14817717	14817718	chunk0079_214_1	92.94072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	14817703	14817733	-68439708	+	(TGTTT)n	Simple_repeat	Simple_repeat	1	31	0	1
chr17	14886371	14886372	chunk0079_216_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	14885151	14887632	-68369809	-	L1PA15-16	LINE	L1	-4130	2723	4	1
chr17	15470696	15470697	chunk0079_230_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	15470656	15471180	-67786261	-	L1MC5	LINE	L1	-406	8898	8316	1
chr17	15793768	15793769	chunk0079_233_1	25.9982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	15793621	15793839	-67463602	+	L1MA8	LINE	L1	6055	6266	-25	1
chr17	15928897	15928898	chunk0079_237_1	7.3267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	15928568	15929296	-67328145	-	L2a	LINE	L2	-2408	1011	275	1
chr17	15935170	15935171	chunk0079_238_1	71.6033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	15935106	15935866	-67321575	-	L1M4	LINE	L1	-5383	2134	1357	1
chr17	16020233	16020234	chunk0079_241_1	18.22957	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	16020096	16020542	-67236899	-	L1ME3Cz	LINE	L1	-663	334	11	1
chr17	16069668	16069669	chunk0079_244_1	10.0617	AR_DHT_Control	chr17	16069599	16069852	-67187589	-	MIR	SINE	MIR	-3	259	4	1
chr17	16085539	16085540	chunk0079_245_1	15.55132	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	16084455	16085819	-67171622	+	L1ME2z	LINE	L1	5122	6610	-332	1
chr17	16122008	16122009	chunk0079_250_1	6.18774	AR_DHT_Control	chr17	16121831	16122070	-67135371	+	MIR	SINE	MIR	12	262	0	1
chr17	16131829	16131830	chunk0079_253_1	222.9301	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr17	16131803	16132018	-67125423	-	MIRb	SINE	MIR	-1	267	42	1
chr17	16141830	16141831	chunk0079_256_1	100.98167	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	16141811	16142028	-67115413	+	MIR	SINE	MIR	3	228	-34	1
chr17	16162876	16162877	chunk0079_259_1	20.4034	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	16162106	16162886	-67094555	+	L1ME3D	LINE	L1	911	1749	-5354	1
chr17	16204761	16204762	chunk0079_266_1	4.39832	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	16204723	16204866	-67052575	-	MIR	SINE	MIR	-59	203	54	1
chr17	16429501	16429502	chunk0079_277_1	5.69781	AR_DHT_Control	chr17	16429315	16429782	-66827659	-	L2a	LINE	L2	0	3426	2919	1
chr17	16468557	16468558	chunk0079_281_1	116.4251	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	16468051	16468739	-66788702	+	L1MB3	LINE	L1	5483	6180	-3	1
chr17	16481252	16481253	chunk0079_282_1	26.3273	AR_DHT_Control	chr17	16481127	16481262	-66776179	-	OldhAT1	DNA	hAT-Ac	-1766	1082	939	1
chr17	16642873	16642874	chunk0079_288_1	13.34619	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	16641581	16643699	-66613742	+	L1MB7	LINE	L1	4601	6682	0	1
chr17	16918587	16918588	chunk0079_293_1	8.46211	AR_DHT_Control	chr17	16918091	16918600	-66338841	-	L2a	LINE	L2	-208	3218	2649	1
chr17	17252195	17252196	chunk0079_316_1	21.91124	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	17252079	17252262	-66005179	+	L1ME3A	LINE	L1	5977	6173	0	1
chr17	17253656	17253657	chunk0079_317_1	38.68814	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	17253628	17253755	-66003686	-	Charlie10a	DNA	hAT-Charlie	-84	196	61	1
chr17	17315553	17315554	chunk0079_322_1	12.8082	AR_DHT_Control	chr17	17315255	17315696	-65941745	-	L2b	LINE	L2	-5	3370	2946	1
chr17	17458913	17458914	chunk0079_327_1	42.7114	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	17458804	17458936	-65798505	-	MER58A	DNA	hAT-Charlie	-42	182	52	1
chr17	17460154	17460155	chunk0079_328_1	6.03438	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	17460009	17460400	-65797041	+	(CCATCA)n	Simple_repeat	Simple_repeat	1	408	0	1
chr17	17534202	17534203	chunk0079_332_1	8.26368	AR_DHT_Control	chr17	17534025	17534546	-65722895	+	L1ME1	LINE	L1	5581	6106	-73	1
chr17	17662566	17662567	chunk0079_337_1	10.1061	AR_DHT_Control	chr17	17662491	17662587	-65594854	-	L1ME1	LINE	L1	-353	5826	5731	1
chr17	17685552	17685553	chunk0079_338_1	7.6291	AR_DHT_Control	chr17	17685257	17685606	-65571835	-	L2b	LINE	L2	-12	3363	2939	1
chr17	17686027	17686028	chunk0079_339_1	6.66755	AR_DHT_Control	chr17	17685599	17686175	-65571266	+	L2b	LINE	L2	2713	3364	-11	1
chr17	17732654	17732655	chunk0079_343_1	18.92395	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	17732628	17732701	-65524740	-	MIR	SINE	MIR	-79	183	111	1
chr17	17959009	17959010	chunk0079_364_1	4.77556	AR_DHT_Control	chr17	17958669	17959343	-65298098	+	MER21B	LTR	ERVL	1	741	-127	1
chr17	18000224	18000225	chunk0079_368_1	6.75904	AR_DHT_Control	chr17	18000194	18000316	-65257125	+	(TGTG)n	Simple_repeat	Simple_repeat	1	124	0	1
chr17	18055728	18055729	chunk0079_370_1	24.50036	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	18055468	18055780	-65201661	-	AluJr	SINE	Alu	0	312	10	1
chr17	18088902	18088903	chunk0079_375_1	4.02808	AR_DHT_Control	chr17	18088862	18089010	-65168431	-	L2b	LINE	L2	-347	3079	2920	1
chr17	18303727	18303728	chunk0079_380_1	64.1056	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	18302963	18303938	-64953503	+	LTR5B	LTR	ERVK	1	998	-4	1
chr17	18530623	18530624	chunk0079_383_1	9.21264	AR_DHT_Control	chr17	18529870	18530872	-64726569	+	L1MC4a	LINE	L1	6527	7621	-261	1
chr17	18543111	18543112	chunk0079_384_1	20.23369	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	18542734	18543230	-64714211	-	L2c	LINE	L2	0	3387	2850	1
chr17	18921959	18921960	chunk0079_388_1	6.7814	AR_DHT_Control	chr17	18921819	18922668	-64334773	-	L1MB5	LINE	L1	-6	6168	5261	1
chr17	18936683	18936684	chunk0079_389_1	8.27376	AR_DHT_Control	chr17	18936476	18936771	-64320670	+	L1MB5	LINE	L1	5488	5787	-387	1
chr17	18988131	18988132	chunk0079_390_1	15.1095	AR_DHT_Control	chr17	18988039	18988133	-64269308	+	L3	LINE	CR1	3938	4034	-65	1
chr17	18988131	18988132	chunk0079_390_1	15.1095	AR_DHT_Control	chr17	18988122	18988201	-64269240	+	L2b	LINE	L2	3299	3375	0	1
chr17	19393952	19393953	chunk0079_400_1	101.3252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	19393556	19394257	-63863184	-	L1MC2	LINE	L1	-307	6428	5718	1
chr17	19402529	19402530	chunk0079_402_1	29.87797	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	19402476	19402563	-63854878	+	L2c	LINE	L2	3284	3360	-15	1
chr17	19508188	19508189	chunk0079_405_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	19508180	19508252	-63749189	+	tRNA-Trp-TGG	tRNA	tRNA	1	72	-3	1
chr17	19519756	19519757	chunk0079_406_1	31.33589	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	19519710	19520714	-63736727	+	LTR5B	LTR	ERVK	1	1000	-2	1
chr17	19630344	19630345	chunk0079_410_1	279.2014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	19630008	19630424	-63627017	+	L2a	LINE	L2	2931	3416	-10	1
chr17	19641524	19641525	chunk0079_412_1	5.70291	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	19640425	19642043	-63615398	+	L1MC	LINE	L1	3987	5677	-667	1
chr17	19808924	19808925	chunk0079_424_1	76.2045	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	19808119	19809445	-63447996	+	L1MB2	LINE	L1	4826	6168	-3	1
chr17	19937742	19937743	chunk0079_429_1	133.4288	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	19937722	19937862	-63319579	+	MIR3	SINE	MIR	18	160	-48	1
chr17	19942813	19942814	chunk0079_431_1	53.90468	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	19942712	19942848	-63314593	+	L2	LINE	L2	1269	1418	-2001	1
chr17	19948234	19948235	chunk0079_432_1	56.29101	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	19948144	19948551	-63308890	+	L1MDb	LINE	L1	41	534	-6013	1
chr17	20011121	20011122	chunk0079_434_1	34.2667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	20010609	20011719	-63245722	-	L1MB2	LINE	L1	-1873	4273	3047	1
chr17	20024576	20024577	chunk0079_436_1	20.76442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20024510	20024961	-63232480	+	LTR33A_	LTR	ERVL	17	511	-9	1
chr17	20059970	20059971	chunk0079_437_1	36.95923	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20059897	20060349	-63197092	-	Charlie25	DNA	hAT-Charlie	-1380	1144	677	1
chr17	20081329	20081330	chunk0079_438_1	6.28117	AR_DHT_Control	chr17	20081200	20081331	-63176110	+	L2b	LINE	L2	3243	3375	0	1
chr17	20165343	20165344	chunk0079_439_1	25.3459	AR_DHT_Control	chr17	20165053	20166036	-63091405	-	L1PA10	LINE	L1	-12	6156	5151	1
chr17	20182953	20182954	chunk0079_441_1	113.72793	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20182830	20182980	-63074461	-	MLT1J	LTR	ERVL-MaLR	-337	175	5	1
chr17	20191287	20191288	chunk0079_445_1	189.7291	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20190857	20191491	-63065950	-	L1MC1	LINE	L1	-317	6016	5386	1
chr17	20202235	20202236	chunk0079_446_1	97.7956	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20201798	20202824	-63054617	+	Tigger2b_Pri	DNA	TcMar-Tigger	3	1067	-1	1
chr17	20206701	20206702	chunk0079_447_1	4.26897	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20206345	20206888	-63050553	-	L1ME4a	LINE	L1	-72	6052	5471	1
chr17	20876437	20876438	chunk0080_8_1	28.42491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	20876369	20876733	-62380708	+	MLT1A1	LTR	ERVL-MaLR	1	404	-4	1
chr17	20880200	20880201	chunk0080_9_1	9.31879	AR_DHT_Control	chr17	20880131	20880281	-62377160	+	L2c	LINE	L2	3184	3339	-48	1
chr17	20928890	20928891	chunk0080_10_1	42.20991	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20928704	20929332	-62328109	+	L2a	LINE	L2	2647	3287	-139	1
chr17	20944503	20944504	chunk0080_16_1	7.27655	AR_DHT_Control	chr17	20943980	20945044	-62312397	-	L1M1	LINE	L1	-5799	1766	16	1
chr17	20965617	20965618	chunk0080_19_1	70.5584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	20964454	20966041	-62291400	-	L1PA16	LINE	L1	-21	6145	4473	1
chr17	21037086	21037087	chunk0080_27_1	58.24493	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	21036055	21037755	-62219686	+	L1MC3	LINE	L1	5819	7618	-167	1
chr17	21053008	21053009	chunk0080_29_1	10.1791	AR_DHT_Control	chr17	21053000	21053068	-62204373	-	Charlie5	DNA	hAT-Charlie	-318	2306	2234	1
chr17	21163950	21163951	chunk0080_34_1	5.51262	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21163746	21163987	-62093454	-	AluJb	SINE	Alu	-70	242	2	1
chr17	21219035	21219036	chunk0080_40_1	218.857	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	21218650	21219282	-62038159	-	L1ME4b	LINE	L1	-11	881	186	1
chr17	21604775	21604776	chunk0080_47_1	20.23369	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	21604734	21606681	-61650760	+	L1M4b	LINE	L1	2738	4683	-2323	1
chr17	21660639	21660640	chunk0080_51_1	8.35541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	21660238	21661295	-61596146	-	L1ME1	LINE	L1	-89	6090	4997	1
chr17	21664026	21664027	chunk0080_52_1	6.49645	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21663840	21664357	-61593084	+	(GATGAT)n	Simple_repeat	Simple_repeat	1	519	0	1
chr17	21667310	21667311	chunk0080_54_1	53.69719	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	21667013	21667388	-61590053	+	L2b	LINE	L2	2935	3350	-25	1
chr17	21846130	21846131	chunk0080_55_1	9.95686	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	21846007	21846797	-61410644	-	L1MEd	LINE	L1	-5354	1732	872	1
chr17	21861293	21861294	chunk0080_56_1	35.4758	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21851151	21889310	-61368131	+	(AATGG)n	Simple_repeat	Simple_repeat	1	38178	0	1
chr17	21863209	21863210	chunk0080_58_1	25.8176	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr17	21851151	21889310	-61368131	+	(AATGG)n	Simple_repeat	Simple_repeat	1	38178	0	1
chr17	21969657	21969658	chunk0080_62_1	32.89269	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21943261	21983441	-61274000	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	40809	0	1
chr17	21973181	21973182	chunk0080_65_1	36.792	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	21943261	21983441	-61274000	+	(ATGGA)n	Simple_repeat	Simple_repeat	1	40809	0	1
chr17	21985396	21985397	chunk0080_67_1	44.0176	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
chr17	21987706	21987707	chunk0080_68_1	8.04363	Merged_Lncap_AR_Veh	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
chr17	21988706	21988707	chunk0080_69_1	26.5596	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
chr17	21991893	21991894	chunk0080_70_1	12.0793	AR_DHT_Control	chr17	21985158	21992022	-61265419	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	7012	0	1
chr17	22066264	22066265	chunk0080_71_1	54.5759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	22066246	22066310	-61191131	+	A-rich	Low_complexity	Low_complexity	1	64	0	1
chr17	22139590	22139591	chunk0080_76_1	8.24351	AR_DHT_Control	chr17	22139573	22139652	-61117789	+	MER67C	LTR	ERV1	431	511	-3	1
chr17	22140453	22140454	chunk0080_77_1	18.64192	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	22140420	22140745	-61116696	-	L2a	LINE	L2	0	3426	3066	1
chr17	22154412	22154413	chunk0080_80_1	11.69966	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	22154148	22155161	-61102280	+	L1MB4	LINE	L1	5129	6179	-1	1
chr17	25788698	25788699	chunk0080_85_1	10.1791	AR_DHT_Control	chr17	25736048	25919281	-57338160	+	ALR/Alpha	Satellite	centr	1	184845	0	1
chr17	25920201	25920202	chunk0080_86_1	34.1606	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr17	25920037	25999999	-57257442	+	ALR/Alpha	Satellite	centr	1	80697	0	1
chr17	26594900	26594901	chunk0080_87_1	74.2288	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26592690	26616164	-56641277	+	ALR/Alpha	Satellite	centr	1	23535	0	1
chr17	26603987	26603988	chunk0080_88_1	37.4141	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	26592690	26616164	-56641277	+	ALR/Alpha	Satellite	centr	1	23535	0	1
chr17	26619983	26619984	chunk0080_90_1	23.9467	Merged_Lncap_AR_Veh	chr17	26616267	26627010	-56630431	+	ALR/Alpha	Satellite	centr	1	10797	0	1
chr17	26777479	26777480	chunk0080_91_1	39.2452	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	26777387	26778179	-56479262	-	L1MEd	LINE	L1	-5354	1732	870	1
chr17	26854877	26854878	chunk0080_95_1	36.6496	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr17	26831998	26860262	-56397179	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	28282	0	1
chr17	26870465	26870466	chunk0080_96_1	14.7725	AR_DHT_Control	chr17	26860262	26876740	-56380701	+	(GAATG)n	Satellite	Satellite	1	16640	0	1
chr17	26879255	26879256	chunk0080_97_1	16.80204	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26878920	26879385	-56378056	+	(TGGAA)n	Simple_repeat	Simple_repeat	4	470	0	1
chr17	26885741	26885742	chunk0080_99_1	78.0672	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	26880356	26885980	-56371461	-	ALR/Alpha	Satellite	centr	-26	5644	1	1
chr17	26938121	26938122	chunk0080_102_1	32.40049	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr17	26938005	26938444	-56318997	+	(GAATG)n	Satellite	Satellite	3	440	0	1
chr17	26939343	26939344	chunk0080_104_1	35.91065	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26939288	26939351	-56318090	+	AluSz6	SINE	Alu	225	289	-23	1
chr17	26940476	26940477	chunk0080_106_1	10.1818	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	26940460	26941027	-56316414	+	(GAATG)n	Satellite	Satellite	4	569	0	1
chr17	27062455	27062456	chunk0080_112_1	25.1663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27062361	27062691	-56194750	-	L1MA9	LINE	L1	-585	5727	5399	1
chr17	27085573	27085574	chunk0080_114_1	151.8776	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27084322	27087076	-56170365	+	L1M2	LINE	L1	2227	5167	-976	1
chr17	27136806	27136807	chunk0080_116_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27136252	27136904	-56120537	+	L1ME2	LINE	L1	3530	4239	-1907	1
chr17	27226799	27226800	chunk0080_118_1	15.43971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	27226297	27227149	-56030292	+	Tigger3	DNA	TcMar-Tigger	2164	3029	0	1
chr17	27256457	27256458	chunk0080_124_1	28.5818	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	27256317	27256502	-56000939	-	MLT1L	LTR	ERVL-MaLR	-12	598	402	1
chr17	27415236	27415237	chunk0080_134_1	248.3415	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27415158	27415277	-55842164	+	L2c	LINE	L2	3280	3387	0	1
chr17	27437705	27437706	chunk0080_135_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	27437608	27437842	-55819599	+	AluJb	SINE	Alu	88	311	-1	1
chr17	27449737	27449738	chunk0080_136_1	6.35432	AR_DHT_Control	chr17	27449427	27449742	-55807699	-	L2	LINE	L2	-2086	1333	1008	1
chr17	27485973	27485974	chunk0080_140_1	12.23434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	27485740	27485977	-55771464	+	MIRb	SINE	MIR	16	262	-6	1
chr17	27506381	27506382	chunk0080_141_1	7.38582	AR_DHT_Control	chr17	27506166	27506429	-55751012	+	MIRb	SINE	MIR	1	268	0	1
chr17	27820976	27820977	chunk0080_147_1	5.60881	AR_DHT_Control	chr17	27820886	27821137	-55436304	+	L1ME3	LINE	L1	5885	6156	-6	1
chr17	27840845	27840846	chunk0080_148_1	23.7656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	27840733	27840925	-55416516	+	MER57A1	LTR	ERV1	67	267	-165	1
chr17	27962507	27962508	chunk0080_151_1	4.67092	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	27962261	27962708	-55294733	+	MLT1G3	LTR	ERVL-MaLR	3	524	-55	1
chr17	28098108	28098109	chunk0080_158_1	24.26641	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	28098077	28098114	-55159327	-	MIR3	SINE	MIR	-59	149	113	1
chr17	28101105	28101106	chunk0080_160_1	8.0483	AR_DHT_Control	chr17	28100427	28101794	-55155647	-	L1ME1	LINE	L1	-676	5661	4316	1
chr17	28468907	28468908	chunk0080_167_1	22.3601	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	28468442	28469112	-54788329	+	L1MB2	LINE	L1	5478	6163	-8	1
chr17	28525325	28525326	chunk0080_170_1	5.9328	AR_DHT_Control	chr17	28525111	28525398	-54732043	+	Tigger19b	DNA	TcMar-Tigger	246	549	-1	1
chr17	28599609	28599610	chunk0080_171_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	28599569	28599766	-54657675	-	MIR	SINE	MIR	-2	260	62	1
chr17	28761356	28761357	chunk0080_179_1	37.05741	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	28761326	28761363	-54496078	+	L2b	LINE	L2	3335	3371	-4	1
chr17	29008783	29008784	chunk0080_192_1	22.7619	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	29008612	29008842	-54248599	+	L2b	LINE	L2	3165	3385	-2	1
chr17	29039177	29039178	chunk0080_193_1	4.17998	AR_DHT_Control	chr17	29038886	29039479	-54217962	-	L1ME4c	LINE	L1	-424	406	2	1
chr17	29111017	29111018	chunk0080_195_1	26.5485	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	29110941	29111122	-54146319	+	L2a	LINE	L2	3234	3417	-9	1
chr17	29251357	29251358	chunk0080_201_1	4.6472	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	29251226	29251434	-54006007	-	MER30	DNA	hAT-Charlie	0	230	1	1
chr17	29332256	29332257	chunk0080_203_1	113.5529	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	29332212	29332301	-53925140	+	L2-3_Crp	LINE	L2	1975	2064	-32	1
chr17	29413241	29413242	chunk0080_209_1	16.98652	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	29413125	29413283	-53844158	+	Tigger15a	DNA	TcMar-Tigger	483	626	-89	1
chr17	29655925	29655926	chunk0080_219_1	11.1716	AR_DHT_Control	chr17	29655864	29656119	-53601322	+	L2a	LINE	L2	3143	3418	-8	1
chr17	29906680	29906681	chunk0080_230_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	29906221	29907526	-53349915	+	L1PA11	LINE	L1	4845	6173	-1	1
chr17	29910550	29910551	chunk0080_231_1	11.3369	AR_DHT_Control	chr17	29910491	29910672	-53346769	+	UCON40	Unknown	Unknown	7	193	-122	1
chr17	30090215	30090216	chunk0080_233_1	6.45888	AR_DHT_Control	chr17	30090137	30090354	-53167087	-	L2a	LINE	L2	-201	3225	2984	1
chr17	30092753	30092754	chunk0080_234_1	5.55081	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	30092688	30092764	-53164677	-	L1ME3A	LINE	L1	-188	5985	5911	1
chr17	30099117	30099118	chunk0080_236_1	15.45181	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	30098634	30099210	-53158231	-	L1MB7	LINE	L1	0	6184	5587	1
chr17	30115420	30115421	chunk0080_237_1	13.4006	AR_DHT_Control	chr17	30115129	30115543	-53141898	+	L1MEc	LINE	L1	2300	2743	-3576	1
chr17	30145136	30145137	chunk0080_238_1	22.3123	AR_DHT_Control	chr17	30144741	30145300	-53112141	-	L1ME5	LINE	L1	-7	6187	5600	1
chr17	30370562	30370563	chunk0080_250_1	13.4175	AR_DHT_Control	chr17	30370533	30370815	-52886626	+	AluJb	SINE	Alu	1	281	-31	1
chr17	30412240	30412241	chunk0080_252_1	11.1716	AR_DHT_Control	chr17	30406814	30413023	-52844418	-	L1PA6	LINE	L1	0	6154	5	1
chr17	30500594	30500595	chunk0080_257_1	7.17788	AR_DHT_Control	chr17	30500000	30500855	-52756586	-	L1M5	LINE	L1	-806	5340	4515	1
chr17	30503039	30503040	chunk0080_258_1	5.54137	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	30503029	30503119	-52754322	+	(ATTT)n	Simple_repeat	Simple_repeat	1	95	0	1
chr17	30713901	30713902	chunk0080_262_1	17.6428	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	30713605	30713982	-52543459	+	L2a	LINE	L2	2993	3410	-16	1
chr17	30916373	30916374	chunk0080_265_1	6.48643	AR_DHT_Control	chr17	30916308	30916479	-52340962	-	L2a	LINE	L2	-1	3425	3211	1
chr17	31088777	31088778	chunk0080_272_1	140.4668	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	31088386	31088922	-52168519	-	HERV16-int	LTR	ERVL	-4189	1525	855	1
chr17	31118439	31118440	chunk0080_274_1	8.27376	AR_DHT_Control	chr17	31118293	31118938	-52138503	-	L1PA7	LINE	L1	0	6154	5526	1
chr17	31126997	31126998	chunk0080_276_1	23.10986	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	31126741	31127596	-52129845	-	L1ME3D	LINE	L1	-891	5255	4289	1
chr17	31128391	31128392	chunk0080_277_1	11.0326	AR_DHT_Control	chr17	31128254	31128640	-52128801	-	L1PA13	LINE	L1	-3947	2838	2463	1
chr17	31147153	31147154	chunk0080_278_1	6.7814	AR_DHT_Control	chr17	31147077	31147672	-52109769	-	L1ME3A	LINE	L1	-8	6165	5514	1
chr17	31186977	31186978	chunk0080_280_1	31.5037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	31185328	31187197	-52070244	+	HERVL-int	LTR	ERVL	2664	4546	-1108	1
chr17	31195498	31195499	chunk0080_281_1	14.11082	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	31195381	31195734	-52061707	-	L1MB2	LINE	L1	-10	6161	5797	1
chr17	31373759	31373760	chunk0080_288_1	51.38793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	31373620	31373952	-51883489	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	1
chr17	31550125	31550126	chunk0080_298_1	17.62868	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr17	31550073	31550145	-51707296	+	tRNA-Thr-ACG	tRNA	tRNA	1	72	-3	1
chr17	31576599	31576600	chunk0080_301_1	8.02414	AR_DHT_Control	chr17	31576402	31576737	-51680704	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	1
chr17	31738364	31738365	chunk0080_304_1	8.57499	AR_DHT_Control	chr17	31738357	31738453	-51518988	+	MIRb	SINE	MIR	161	252	-16	1
chr17	31811149	31811150	chunk0080_310_1	46.7627	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	31810996	31811504	-51445937	+	L1MB3	LINE	L1	5624	6133	-50	1
chr17	31858539	31858540	chunk0080_312_1	11.142	AR_DHT_Control	chr17	31858397	31858542	-51398899	-	L2a	LINE	L2	-2	3424	3256	1
chr17	32317357	32317358	chunk0080_323_1	13.0632	AR_DHT_Control	chr17	32317259	32317363	-50940078	-	Charlie4z	DNA	hAT-Charlie	-6	161	62	1
chr17	32423039	32423040	chunk0080_328_1	23.07769	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	32422841	32423100	-50834341	-	HAL1ME	LINE	L1	-1317	1148	866	1
chr17	32621427	32621428	chunk0080_335_1	34.99679	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	32621264	32621489	-50635952	+	L2c	LINE	L2	3136	3380	-7	1
chr17	32671123	32671124	chunk0080_339_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	32670469	32671405	-50586036	+	LTR28	LTR	ERV1	1	1020	0	1
chr17	32696494	32696495	chunk0080_340_1	5.24411	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	32696454	32697015	-50560426	-	LTR106_Mam	LTR	LTR	-64	644	37	1
chr17	32709751	32709752	chunk0080_342_1	27.97217	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	32709691	32711085	-50546356	+	L1M5	LINE	L1	4178	5672	-522	1
chr17	32764087	32764088	chunk0080_343_1	23.67833	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	32763939	32764132	-50493309	+	L1ME3G	LINE	L1	352	530	-394	1
chr17	32829468	32829469	chunk0080_346_1	11.914	AR_DHT_Control	chr17	32829450	32829752	-50427689	-	AluSz6	SINE	Alu	-9	303	2	1
chr17	32854573	32854574	chunk0080_352_1	19.43039	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	32854454	32854644	-50402797	-	Tigger19a	DNA	TcMar-Tigger	-1	322	125	1
chr17	32925102	32925103	chunk0080_358_1	9.18172	AR_DHT_Control	chr17	32924530	32925397	-50332044	+	MER51-int	LTR	ERV1	6560	7537	0	1
chr17	33079313	33079314	chunk0080_363_1	46.9764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	33079114	33079718	-50177723	-	L2c	LINE	L2	-1	3386	2598	1
chr17	33087010	33087011	chunk0080_366_1	191.4129	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	33086550	33087104	-50170337	+	MER67A	LTR	ERV1	10	543	0	1
chr17	33199925	33199926	chunk0080_369_1	9.90105	AR_DHT_Control	chr17	33199858	33200154	-50057287	+	L2c	LINE	L2	2885	3164	-211	1
chr17	33284281	33284282	chunk0080_371_1	21.5654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	33284104	33284341	-49973100	+	MamRep434	DNA	TcMar-Tigger	93	333	-93	1
chr17	33307869	33307870	chunk0080_373_1	6.54035	AR_DHT_Control	chr17	33307699	33307878	-49949563	+	MIRb	SINE	MIR	72	253	-15	1
chr17	33589248	33589249	chunk0080_376_1	12.9987	AR_DHT_Control	chr17	33589085	33589328	-49668113	-	L2c	LINE	L2	0	3387	3116	1
chr17	33618741	33618742	chunk0080_378_1	4.70267	AR_DHT_Control	chr17	33618720	33619031	-49638410	+	L2b	LINE	L2	2913	3210	-177	1
chr17	34376534	34376535	chunk0080_385_1	63.0213	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	34376138	34376687	-48880754	-	L1ME3F	LINE	L1	-79	6164	5611	1
chr17	34725925	34725926	chunk0080_387_1	23.8961	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	34725898	34726082	-48531359	-	MER121	DNA	hAT?	-85	316	127	1
chr17	35030886	35030887	chunk0080_394_1	141.0841	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	35030776	35030916	-48226525	+	MIRc	SINE	MIR	2	139	-129	1
chr17	35096524	35096525	chunk0080_397_1	16.4041	AR_DHT_Control	chr17	35096333	35096578	-48160863	+	MLT1L	LTR	ERVL-MaLR	285	544	-66	1
chr17	35196677	35196678	chunk0080_399_1	6.48643	AR_DHT_Control	chr17	35196482	35196785	-48060656	-	L1M2	LINE	L1	-840	5303	5039	1
chr17	35315488	35315489	chunk0080_402_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	35315478	35315784	-47941657	-	L1M7	LINE	L1	-4799	1419	1113	1
chr17	35463503	35463504	chunk0080_404_1	29.37562	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	35463368	35463761	-47793680	+	LTR57	LTR	ERVL	1	411	0	1
chr17	35664700	35664701	chunk0080_409_1	8.18895	AR_DHT_Control	chr17	35664636	35664785	-47592656	-	L2a	LINE	L2	0	3426	3273	1
chr17	35692899	35692900	chunk0080_411_1	25.62951	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	35692792	35692960	-47564481	-	L3	LINE	CR1	-11	4088	3913	1
chr17	35706218	35706219	chunk0080_414_1	32.0726	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	35706102	35706246	-47551195	+	Charlie4z	DNA	hAT-Charlie	17	166	-1	1
chr17	35783288	35783289	chunk0080_418_1	23.91853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	35783125	35783297	-47474144	+	MIRb	SINE	MIR	97	262	-6	1
chr17	35800274	35800275	chunk0080_422_1	5.36932	AR_DHT_Control	chr17	35800237	35800357	-47457084	+	MIRc	SINE	MIR	86	204	-64	1
chr17	36020774	36020775	chunk0080_435_1	9.56998	AR_DHT_Control	chr17	36019661	36023801	-47233640	-	L1P2	LINE	L1	-2082	4379	199	1
chr17	36074439	36074440	chunk0080_437_1	24.18994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	36074286	36074651	-47182790	+	MER58B	DNA	hAT-Charlie	1	337	-4	1
chr17	36146946	36146947	chunk0080_438_1	13.6098	AR_DHT_Control	chr17	36146860	36147534	-47109907	-	L1M5	LINE	L1	-1053	5093	4355	1
chr17	36773060	36773061	chunk0080_447_1	11.92159	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	36772604	36773493	-46483948	-	L1MC2	LINE	L1	-271	6073	5200	1
chr17	36967397	36967398	chunk0080_450_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	36966920	36968270	-46289171	-	HAL1	LINE	L1	-19	2488	1033	1
chr17	37254633	37254634	chunk0081_11_1	7.91029	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	37254365	37254696	-46002745	+	L2c	LINE	L2	3049	3387	0	1
chr17	37315805	37315806	chunk0081_19_1	118.5588	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	37315352	37316131	-45941310	-	MER21C	LTR	ERVL	-33	905	1	1
chr17	37803225	37803226	chunk0081_49_1	32.81672	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	37802631	37803446	-45453995	-	MLT1K-int	LTR	ERVL-MaLR	-19	1368	514	1
chr17	38257325	38257326	chunk0081_50_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	38257285	38257356	-45000085	+	GA-rich	Low_complexity	Low_complexity	1	75	0	1
chr17	38560891	38560892	chunk0081_55_1	6.93299	AR_DHT_Control	chr17	38560869	38560921	-44696520	-	MamRTE1	LINE	RTE-BovB	-2739	1073	1022	1
chr17	38885325	38885326	chunk0081_66_1	7.83165	AR_DHT_Control	chr17	38885219	38885348	-44372093	+	MIRb	SINE	MIR	96	227	-41	1
chr17	39123976	39123977	chunk0081_74_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	39123606	39124075	-44133366	+	MamGypsy2-I	LTR	Gypsy	3225	3720	-446	1
chr17	39209479	39209480	chunk0081_76_1	78.77766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	39209371	39209520	-44047921	+	MIRb	SINE	MIR	88	247	-21	1
chr17	39319862	39319863	chunk0081_79_1	4.38465	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	39319795	39319911	-43937530	-	AluJr	SINE	Alu	-194	118	1	1
chr17	39327500	39327501	chunk0081_80_1	55.3623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	39327247	39327519	-43929922	+	L1MC4	LINE	L1	6304	6591	-1291	1
chr17	39380678	39380679	chunk0081_83_1	39.9653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	39380013	39380800	-43876641	+	L2a	LINE	L2	2624	3422	-4	1
chr17	39652379	39652380	chunk0081_91_1	18.68004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	39652279	39652929	-43604512	-	L2a	LINE	L2	0	3426	2658	1
chr17	39818008	39818009	chunk0081_104_1	172.5237	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	39817921	39818264	-43439177	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr17	39934420	39934421	chunk0081_108_1	26.5358	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	39934336	39934432	-43323009	-	MamRep1879	DNA	hAT-Tip100?	-117	99	1	1
chr17	39981116	39981117	chunk0081_110_1	4.36616	AR_DHT_Control	chr17	39981110	39981152	-43276289	+	(GACGGCA)n	Simple_repeat	Simple_repeat	1	45	0	1
chr17	39987753	39987754	chunk0081_112_1	8.02791	AR_DHT_Control	chr17	39987652	39987781	-43269660	-	FLAM_A	SINE	Alu	-13	129	1	1
chr17	40066813	40066814	chunk0081_117_1	19.1105	AR_DHT_Control	chr17	40066751	40066975	-43190466	+	MIR	SINE	MIR	11	264	-4	1
chr17	40718695	40718696	chunk0081_145_1	37.486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	40718557	40718707	-42538734	+	AluJr	SINE	Alu	137	287	-25	1
chr17	40828559	40828560	chunk0081_154_1	21.93423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	40828519	40828681	-42428760	+	L2b	LINE	L2	2993	3153	-222	1
chr17	40903812	40903813	chunk0081_156_1	18.18709	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	40903762	40903928	-42353513	-	L2a	LINE	L2	0	3426	3261	1
chr17	41484429	41484430	chunk0081_171_1	57.994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	41484411	41484479	-41772962	-	L3	LINE	CR1	-123	3976	3907	1
chr17	41633707	41633708	chunk0081_178_1	7.08265	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	41632550	41633816	-41623625	+	(GT)n	Simple_repeat	Simple_repeat	1	1327	0	1
chr17	41663773	41663774	chunk0081_179_1	6.86821	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	41663578	41663971	-41593470	-	L2a	LINE	L2	0	3426	2918	1
chr17	41665816	41665817	chunk0081_180_1	5.81492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	41665810	41665882	-41591559	+	L2c	LINE	L2	3316	3386	-1	1
chr17	41718127	41718128	chunk0081_183_1	26.55062	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	41717973	41718151	-41539290	-	MER34A1	LTR	ERV1	0	587	393	1
chr17	41989976	41989977	chunk0081_190_1	12.1004	AR_DHT_Control	chr17	41989776	41989985	-41267456	+	MER58A	DNA	hAT-Charlie	1	220	-4	1
chr17	42096487	42096488	chunk0081_191_1	6.49378	AR_DHT_Control	chr17	42095842	42096508	-41160933	-	MER115	DNA	hAT-Tip100	0	693	1	1
chr17	42384982	42384983	chunk0081_199_1	13.3231	AR_DHT_Control	chr17	42384980	42385035	-40872406	+	MER3	DNA	hAT-Charlie	2	56	-153	1
chr17	42441675	42441676	chunk0081_207_1	7.36432	AR_DHT_Control	chr17	42441612	42441828	-40815613	+	L1MDa	LINE	L1	469	681	-5846	1
chr17	42541352	42541353	chunk0081_211_1	126.6054	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42541316	42541371	-40716070	-	MIRc	SINE	MIR	-25	243	191	1
chr17	42644005	42644006	chunk0081_220_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42643944	42644104	-40613337	+	AluJb	SINE	Alu	135	291	-21	1
chr17	42719906	42719907	chunk0081_223_1	19.3375	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42719876	42720066	-40537375	+	L1ME4a	LINE	L1	5755	5954	-170	1
chr17	42805263	42805264	chunk0081_229_1	34.4135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	42805186	42805689	-40451752	-	L2c	LINE	L2	-2	3385	2869	1
chr17	42833488	42833489	chunk0081_231_1	5.36932	AR_DHT_Control	chr17	42833430	42833522	-40423919	+	(GCGA)n	Simple_repeat	Simple_repeat	1	97	0	1
chr17	42907135	42907136	chunk0081_235_1	42.18577	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42906931	42907171	-40350270	-	L2a	LINE	L2	-253	3173	2937	1
chr17	42990178	42990179	chunk0081_245_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	42990132	42990206	-40267235	-	L2b	LINE	L2	-1	3425	3313	1
chr17	43011139	43011140	chunk0081_246_1	5.58563	AR_DHT_Control	chr17	43011118	43011236	-40246205	+	MIR	SINE	MIR	1	147	-115	1
chr17	43201274	43201275	chunk0081_249_1	23.5236	AR_DHT_Control	chr17	43201247	43201392	-40056049	+	Tigger19a	DNA	TcMar-Tigger	165	322	-1	1
chr17	43316235	43316236	chunk0081_251_1	5.59431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	43316222	43316353	-39941088	-	AluJr4	SINE	Alu	-6	306	174	1
chr17	43326523	43326524	chunk0081_253_1	14.13586	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	43325133	43331647	-39925794	-	HERVK13-int	LTR	ERVK	0	8116	1070	1
chr17	43337176	43337177	chunk0081_255_1	40.07079	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	43335662	43337361	-39920080	-	HERVK13-int	LTR	ERVK	0	8116	6435	1
chr17	43357199	43357200	chunk0081_257_1	8.36735	AR_DHT_Control	chr17	43357143	43357500	-39899941	-	PRIMA41-int	LTR	ERV1	-5140	2616	2315	1
chr17	43518138	43518139	chunk0081_264_1	6.48643	AR_DHT_Control	chr17	43518051	43518214	-39739227	+	MIRb	SINE	MIR	84	262	0	1
chr17	43749725	43749726	chunk0081_269_1	53.1866	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	43749554	43749908	-39507533	+	L2a	LINE	L2	3032	3426	0	1
chr17	43772487	43772488	chunk0081_271_1	55.88519	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	43772431	43772549	-39484892	+	L2c	LINE	L2	3091	3209	-166	1
chr17	44149805	44149806	chunk0081_282_1	11.978	AR_DHT_Control	chr17	44149714	44150121	-39107320	-	L2c	LINE	L2	-19	3407	2934	1
chr17	44269527	44269528	chunk0081_283_1	9.21264	AR_DHT_Control	chr17	44269514	44269732	-38987709	-	MIR	SINE	MIR	-21	241	21	1
chr17	44689975	44689976	chunk0081_289_1	4.96796	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	44689916	44690110	-38567331	-	MIRb	SINE	MIR	-47	221	3	1
chr17	45043568	45043569	chunk0081_293_1	35.18729	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	45043393	45043788	-38213653	+	LTR57	LTR	ERVL	1	410	-1	1
chr17	45146989	45146990	chunk0081_297_1	6.05666	AR_DHT_Control	chr17	45146782	45147013	-38110428	+	MIRc	SINE	MIR	22	263	-5	1
chr17	45296944	45296945	chunk0081_302_1	9.33116	AR_DHT_Control	chr17	45296890	45296950	-37960491	-	L2a	LINE	L2	-3	3423	3364	1
chr17	45296944	45296945	chunk0081_302_1	9.33116	AR_DHT_Control	chr17	45296939	45297090	-37960351	-	MIRb	SINE	MIR	-2	266	114	1
chr17	45388606	45388607	chunk0081_303_1	5.80103	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	45388248	45389242	-37868199	-	L2c	LINE	L2	-516	2903	1751	1
chr17	45577113	45577114	chunk0081_306_1	16.74158	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	45576624	45577208	-37680233	+	LTR10C	LTR	ERV1	1	591	0	1
chr17	46018299	46018300	chunk0081_317_1	48.6668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	46018215	46018446	-37238995	+	MamRep434	DNA	TcMar-Tigger	59	326	-100	1
chr17	46057399	46057400	chunk0081_320_1	22.1478	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	46057137	46057683	-37199758	+	L1MC5	LINE	L1	8148	8741	-563	1
chr17	46121399	46121400	chunk0081_323_1	14.9323	AR_DHT_Control	chr17	46120908	46121690	-37135751	+	L2a	LINE	L2	2444	3313	-113	1
chr17	46166758	46166759	chunk0081_326_1	12.96412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	46166739	46166999	-37090442	-	L4_A_Mam	LINE	RTE-X	-198	4792	4508	1
chr17	46781485	46781486	chunk0081_335_1	30.06818	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	46781430	46781730	-36475711	+	L1MB4	LINE	L1	5823	6149	-31	1
chr17	47428333	47428334	chunk0081_351_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	47428208	47428468	-35828973	-	HAL1	LINE	L1	-629	1878	1579	1
chr17	47649916	47649917	chunk0081_355_1	7.92341	AR_DHT_Control	chr17	47649891	47649972	-35607469	+	(TCCC)n	Simple_repeat	Simple_repeat	1	82	0	1
chr17	47831326	47831327	chunk0081_359_1	7.77075	AR_DHT_Control	chr17	47831013	47831409	-35426032	-	L2b	LINE	L2	0	3375	2931	1
chr17	47883380	47883381	chunk0081_363_1	146.3029	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	47883372	47883514	-35373927	+	L2a	LINE	L2	3017	3161	-265	1
chr17	48008633	48008634	chunk0081_378_1	33.6671	AR_DHT_Control	chr17	48008483	48008929	-35248512	-	L1MC4	LINE	L1	0	8042	7621	1
chr17	48199424	48199425	chunk0081_388_1	17.19784	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	48199174	48199607	-35057834	+	L2c	LINE	L2	2776	3230	-157	1
chr17	48407224	48407225	chunk0081_406_1	31.1378	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	48406995	48407364	-34850077	+	L1M6	LINE	L1	3030	3415	-2985	1
chr17	48505724	48505725	chunk0081_410_1	6.43609	AR_DHT_Control	chr17	48505619	48505830	-34751611	+	MIRc	SINE	MIR	20	248	-20	1
chr17	48759452	48759453	chunk0081_420_1	8.1827	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	48759442	48759613	-34497828	-	L2c	LINE	L2	0	3387	3196	1
chr17	48760765	48760766	chunk0081_421_1	12.1764	AR_DHT_Control	chr17	48760733	48760880	-34496561	-	MER45A	DNA	hAT-Tip100	0	178	16	1
chr17	48779739	48779740	chunk0081_422_1	22.1487	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	48779378	48780094	-34477347	+	L1ME2z	LINE	L1	5481	6167	-277	1
chr17	48802313	48802314	chunk0081_427_1	49.66806	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	48802188	48802361	-34455080	+	Tigger19a	DNA	TcMar-Tigger	17	188	-135	1
chr17	48872264	48872265	chunk0081_433_1	8.08101	AR_DHT_Control	chr17	48872200	48872331	-34385110	+	Tigger19a	DNA	TcMar-Tigger	74	212	-111	1
chr17	49077139	49077140	chunk0081_443_1	21.53434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	49077100	49077304	-34180137	-	LTR108e_Mam	LTR	ERVL	-28	520	311	1
chr17	49191681	49191682	chunk0081_447_1	18.98534	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	49191588	49191799	-34065642	-	L1ME4b	LINE	L1	-2222	555	316	1
chr17	49333978	49333979	chunk0081_450_1	17.72155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	49333746	49334199	-33923242	+	L1MB7	LINE	L1	5371	5827	-357	1
chr17	49338774	49338775	chunk0081_451_1	11.1588	AR_DHT_Control	chr17	49338611	49338936	-33918505	-	L2	LINE	L2	-972	2447	2080	1
chr17	49373942	49373943	chunk0081_459_1	74.7093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	49373929	49373999	-33883442	-	Tigger14a	DNA	TcMar-Tigger	0	324	251	1
chr17	49391268	49391269	chunk0081_460_1	259.4973	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	49391178	49391323	-33866118	+	L1ME3G	LINE	L1	530	675	-249	1
chr17	49566184	49566185	chunk0081_467_1	55.33809	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	49565950	49566367	-33691074	-	L2c	LINE	L2	0	3387	2915	1
chr17	49678059	49678060	chunk0082_4_1	4.83532	AR_DHT_Control	chr17	49678021	49678084	-33579357	+	(AC)n	Simple_repeat	Simple_repeat	1	63	0	1
chr17	49708480	49708481	chunk0082_5_1	6.98722	AR_DHT_Control	chr17	49708478	49708668	-33548773	+	MIRc	SINE	MIR	61	263	-5	1
chr17	49813170	49813171	chunk0082_7_1	6.3126	AR_DHT_Control	chr17	49813012	49813374	-33444067	-	L1PA17	LINE	L1	0	6166	5806	1
chr17	50218047	50218048	chunk0082_12_1	8.35541	AR_DHT_Control	chr17	50217713	50218612	-33038829	+	Charlie25	DNA	hAT-Charlie	176	1062	-1462	1
chr17	50309565	50309566	chunk0082_15_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	50309508	50309627	-32947814	+	MER110A	LTR	ERV1	72	203	-265	1
chr17	50319155	50319156	chunk0082_16_1	7.86105	AR_DHT_Control	chr17	50318060	50319305	-32938136	+	ERV3-16A3_I-int	LTR	ERVL	101	1425	-3571	1
chr17	50694280	50694281	chunk0082_25_1	11.351	AR_DHT_Control	chr17	50694197	50694396	-32563045	-	Eulor2B	DNA?	DNA?	-47	226	9	1
chr17	50698701	50698702	chunk0082_26_1	10.5437	AR_DHT_Control	chr17	50698685	50698858	-32558583	+	L1MC4	LINE	L1	7680	7815	-227	1
chr17	50786154	50786155	chunk0082_34_1	8.79298	AR_DHT_Control	chr17	50786018	50786155	-32471286	-	MamGyp-int	LTR	Gypsy	-2337	2766	2628	1
chr17	50829007	50829008	chunk0082_35_1	14.0461	AR_DHT_Control	chr17	50828891	50829339	-32428102	-	MLT1C	LTR	ERVL-MaLR	0	505	25	1
chr17	51080369	51080370	chunk0082_51_1	13.2288	AR_DHT_Control	chr17	51080159	51080600	-32176841	+	L2a	LINE	L2	1965	2440	-979	1
chr17	51153957	51153958	chunk0082_53_1	4.77556	AR_DHT_Control	chr17	51153887	51153974	-32103467	+	L2c	LINE	L2	3299	3385	-2	1
chr17	51221465	51221466	chunk0082_55_1	41.2486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	51221327	51221568	-32035873	+	L3	LINE	CR1	2372	2628	-1471	1
chr17	51242833	51242834	chunk0082_56_1	6.48643	AR_DHT_Control	chr17	51241865	51243308	-32014133	-	L1MC5a	LINE	L1	-1117	1660	150	1
chr17	51305712	51305713	chunk0082_58_1	29.3516	AR_DHT_Control	chr17	51304948	51311073	-31946368	+	L1PA6	LINE	L1	5	6150	-4	1
chr17	51408803	51408804	chunk0082_65_1	25.9202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	51408749	51408861	-31848580	+	L2c	LINE	L2	3094	3210	-177	1
chr17	51433475	51433476	chunk0082_70_1	37.8682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	51433140	51433888	-31823553	-	L1MEi	LINE	L1	-3475	2739	1923	1
chr17	51486235	51486236	chunk0082_72_1	9.21264	AR_DHT_Control	chr17	51486063	51486446	-31770995	-	LTR83	LTR	ERVL	-105	675	258	1
chr17	51588240	51588241	chunk0082_73_1	74.5286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	51587848	51588393	-31669048	+	L2a	LINE	L2	2807	3422	-4	1
chr17	52384994	52384995	chunk0082_85_1	7.22694	AR_DHT_Control	chr17	52384937	52385021	-30872420	-	OldhAT1	DNA	hAT-Ac	-732	2116	2035	1
chr17	53322048	53322049	chunk0082_90_1	56.0994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	53319798	53322537	-29934904	+	L1MC1	LINE	L1	3522	6333	0	1
chr17	53336400	53336401	chunk0082_92_1	5.6425	AR_DHT_Control	chr17	53336341	53337569	-29919872	+	L1PA15	LINE	L1	1206	2445	-4340	1
chr17	53931924	53931925	chunk0082_95_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	53930977	53933125	-29324316	-	L1MA2	LINE	L1	-5210	2355	17	1
chr17	54409292	54409293	chunk0082_96_1	6.13982	AR_DHT_Control	chr17	54409011	54409301	-28848140	+	L2c	LINE	L2	3068	3387	0	1
chr17	54554419	54554420	chunk0082_99_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	54553425	54555865	-28701576	-	L1MA5	LINE	L1	-5192	2374	411	1
chr17	54780417	54780418	chunk0082_105_1	26.08227	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	54780322	54780442	-28476999	+	MIRc	SINE	MIR	120	235	-33	1
chr17	54819943	54819944	chunk0082_109_1	48.9433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	54819898	54819965	-28437476	+	L1M5	LINE	L1	4755	4821	-1325	1
chr17	54833111	54833112	chunk0082_110_1	22.13585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	54832913	54833553	-28423888	+	L1ME3	LINE	L1	5532	6154	-8	1
chr17	54969929	54969930	chunk0082_115_1	13.8639	AR_DHT_Control	chr17	54969736	54970413	-28287028	-	L2a	LINE	L2	-6	3420	2689	1
chr17	55110706	55110707	chunk0082_118_1	8.27376	AR_DHT_Control	chr17	55110585	55110787	-28146654	-	MER58A	DNA	hAT-Charlie	-6	218	12	1
chr17	55138247	55138248	chunk0082_120_1	7.97574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	55138102	55138301	-28119140	+	L2a	LINE	L2	3182	3420	-6	1
chr17	55154304	55154305	chunk0082_122_1	6.94032	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	55154053	55154338	-28103103	-	MLT1J2	LTR	ERVL-MaLR	-83	365	64	1
chr17	55169783	55169784	chunk0082_128_1	21.30064	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	55169781	55169921	-28087520	-	Plat_L3	LINE	CR1	-38	3548	3416	1
chr17	55362864	55362865	chunk0082_138_1	19.97085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	55362817	55363289	-27894152	-	LTR33	LTR	ERVL	-10	505	29	1
chr17	55384349	55384350	chunk0082_139_1	6.41766	AR_DHT_Control	chr17	55383660	55384379	-27873062	+	LTR34	LTR	ERV1	1	699	0	1
chr17	55455018	55455019	chunk0082_145_1	33.0287	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	55454821	55455161	-27802280	-	L1ME4a	LINE	L1	-256	5868	5523	1
chr17	55484735	55484736	chunk0082_147_1	5.00158	AR_DHT_Control	chr17	55484170	55485265	-27772176	+	L1MC5a	LINE	L1	1696	2773	-4	1
chr17	55588438	55588439	chunk0082_152_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	55588064	55588582	-27668859	+	L2b	LINE	L2	2911	3383	-4	1
chr17	55631364	55631365	chunk0082_157_1	24.56373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	55630581	55631759	-27625682	-	L1MB7	LINE	L1	-11	6173	4921	1
chr17	55668271	55668272	chunk0082_158_1	26.7584	AR_DHT_Control	chr17	55667796	55668284	-27589157	-	LTR53	LTR	ERVL	0	519	5	1
chr17	56118768	56118769	chunk0082_177_1	18.43626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	56118742	56119573	-27137868	-	L2a	LINE	L2	0	3426	1831	1
chr17	56400629	56400630	chunk0082_184_1	55.1368	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	56399958	56401325	-26856116	-	L1PB1	LINE	L1	-374	6493	5130	1
chr17	56490201	56490202	chunk0082_189_1	101.54634	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	56490058	56490484	-26766957	-	L2c	LINE	L2	0	3387	2950	1
chr17	56611953	56611954	chunk0082_192_1	26.04316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	56611638	56611965	-26645476	-	L2b	LINE	L2	0	3375	3023	1
chr17	56853517	56853518	chunk0082_202_1	5.6503	AR_DHT_Control	chr17	56853072	56853654	-26403787	-	L1MA7	LINE	L1	-765	5378	4796	1
chr17	56854185	56854186	chunk0082_203_1	13.29686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	56853659	56854308	-26403133	+	L1MA7	LINE	L1	5489	6131	-160	1
chr17	56912390	56912391	chunk0082_206_1	11.3067	AR_DHT_Control	chr17	56912295	56912400	-26345041	-	MIR3	SINE	MIR	-22	186	78	1
chr17	56927175	56927176	chunk0082_207_1	8.76676	AR_DHT_Control	chr17	56926504	56927659	-26329782	+	MER4-int	LTR	ERV1	682	2212	-4386	1
chr17	57016683	57016684	chunk0082_208_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	57016450	57017090	-26240351	+	HERV35I-int	LTR	ERV1	2	796	-6122	1
chr17	57021747	57021748	chunk0082_209_1	131.1287	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	57021687	57021783	-26235658	+	L2a	LINE	L2	3300	3426	0	1
chr17	57035008	57035009	chunk0082_212_1	7.56068	AR_DHT_Control	chr17	57034950	57035151	-26222290	+	Tigger19a	DNA	TcMar-Tigger	32	236	-87	1
chr17	57076011	57076012	chunk0082_216_1	187.0156	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	57075798	57076522	-26180919	-	L1ME3Cz	LINE	L1	-9	988	285	1
chr17	57126743	57126744	chunk0082_219_1	5.82105	AR_DHT_Control	chr17	57126596	57126782	-26130659	-	L1ME4b	LINE	L1	-1	891	698	1
chr17	57215470	57215471	chunk0082_223_1	80.9929	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	57214553	57215674	-26041767	-	Tigger7	DNA	TcMar-Tigger	-1375	1116	1	1
chr17	57288203	57288204	chunk0082_231_1	8.43053	AR_DHT_Control	chr17	57288046	57288269	-25969172	+	MIRb	SINE	MIR	2	254	-14	1
chr17	57428911	57428912	chunk0082_245_1	50.1923	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	57428911	57428988	-25828453	-	L2a	LINE	L2	0	3426	3349	1
chr17	57583197	57583198	chunk0082_259_1	20.74526	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	57583026	57583484	-25673957	-	Charlie7	DNA	hAT-Charlie	-2049	563	53	1
chr17	57853856	57853857	chunk0082_264_1	100.6617	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	57853739	57853875	-25403566	+	LTR33	LTR	ERVL	2	133	-382	1
chr17	57940099	57940100	chunk0082_274_1	8.1827	AR_DHT_Control	chr17	57940064	57940197	-25317244	-	MIRc	SINE	MIR	-105	163	20	1
chr17	58023177	58023178	chunk0082_280_1	324.9418	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	58023010	58023310	-25234131	-	LTR67B	LTR	ERVL	-36	584	305	1
chr17	58097540	58097541	chunk0082_285_1	125.1845	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	58096222	58097754	-25159687	-	ERVL-B4-int	LTR	ERVL	-1	5713	4116	1
chr17	58110827	58110828	chunk0082_287_1	54.9545	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	58110649	58111157	-25146284	-	Charlie29a	DNA	hAT-Charlie	0	719	194	1
chr17	58575682	58575683	chunk0082_294_1	66.02264	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	58575497	58575886	-24681555	+	MLT1I	LTR	ERVL-MaLR	9	407	-4	1
chr17	58960171	58960172	chunk0082_306_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	58960098	58960406	-24297035	-	MLT1K	LTR	ERVL-MaLR	-121	474	159	1
chr17	59101161	59101162	chunk0082_307_1	13.47118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	59101130	59101166	-24156275	+	L2a	LINE	L2	3390	3425	-1	1
chr17	59127278	59127279	chunk0082_312_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	59127256	59127348	-24130093	+	FLAM_C	SINE	Alu	21	100	-33	1
chr17	59367161	59367162	chunk0082_321_1	110.0509	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	59367142	59367204	-23890237	-	L2b	LINE	L2	-1	3374	3312	1
chr17	59514586	59514587	chunk0082_325_1	17.5522	AR_DHT_Control	chr17	59514500	59514821	-23742620	+	LTR89	LTR	ERVL?	264	637	-242	1
chr17	59643667	59643668	chunk0082_328_1	12.5159	AR_DHT_Control	chr17	59643457	59643712	-23613729	+	L2c	LINE	L2	2814	3087	-300	1
chr17	59723754	59723755	chunk0082_332_1	20.2793	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	59723262	59723941	-23533500	-	L2	LINE	L2	-1081	2338	1498	1
chr17	59728311	59728312	chunk0082_334_1	112.7719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	59728307	59728361	-23529080	+	L2c	LINE	L2	3318	3371	-4	1
chr17	59853452	59853453	chunk0082_346_1	4.70267	AR_DHT_Control	chr17	59853384	59853484	-23403957	+	L2c	LINE	L2	3288	3382	-5	1
chr17	60037435	60037436	chunk0082_350_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	60037039	60038031	-23219410	-	L1MD2	LINE	L1	-5514	1126	54	1
chr17	60154624	60154625	chunk0082_356_1	16.55168	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60154492	60154640	-23102801	-	L1MC2	LINE	L1	0	6344	6192	1
chr17	60315668	60315669	chunk0082_366_1	8.62865	AR_DHT_Control	chr17	60315432	60315738	-22941703	+	L1MB4	LINE	L1	5484	5821	-359	1
chr17	60342388	60342389	chunk0082_367_1	17.4573	AR_DHT_Control	chr17	60341533	60343056	-22914385	-	L1P2	LINE	L1	-4651	1533	7	1
chr17	60356209	60356210	chunk0082_371_1	15.93595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60355860	60357011	-22900430	+	L1M4	LINE	L1	164	1341	-6176	1
chr17	60501773	60501774	chunk0082_382_1	11.22186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60501725	60501794	-22755647	+	MamSINE1	SINE	tRNA-RTE	15	88	-202	1
chr17	60590304	60590305	chunk0082_385_1	21.4045	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60590218	60590321	-22667120	-	MLT1L	LTR	ERVL-MaLR	0	610	505	1
chr17	60596810	60596811	chunk0082_386_1	8.46481	AR_DHT_Control	chr17	60596765	60597226	-22660215	-	L2a	LINE	L2	-50	3376	2878	1
chr17	60606342	60606343	chunk0082_388_1	11.1584	AR_DHT_Control	chr17	60605922	60606567	-22650874	-	L1MB4	LINE	L1	-36	6144	5479	1
chr17	60749035	60749036	chunk0082_394_1	22.3294	AR_DHT_Control	chr17	60748940	60749046	-22508395	-	HY1	scRNA	scRNA	-7	112	1	1
chr17	60764591	60764592	chunk0082_395_1	12.1886	AR_DHT_Control	chr17	60761215	60767330	-22490111	-	L1PA6	LINE	L1	-3	6151	4	1
chr17	60801542	60801543	chunk0082_398_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	60799862	60801618	-22455823	-	L1MD2	LINE	L1	-465	5894	4013	1
chr17	60866742	60866743	chunk0082_402_1	16.62151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60866427	60866757	-22390684	-	L1ME1	LINE	L1	-2385	3761	3380	1
chr17	60920373	60920374	chunk0082_407_1	34.4303	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60920110	60920588	-22336853	+	L1PA16	LINE	L1	5000	5494	-672	1
chr17	60950513	60950514	chunk0082_409_1	63.1894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	60950498	60950579	-22306862	-	AluJo	SINE	Alu	-189	123	32	1
chr17	61014424	61014425	chunk0082_410_1	6.18182	AR_DHT_Control	chr17	61014316	61014589	-22242852	+	L1MC	LINE	L1	4735	5005	-1141	1
chr17	61106477	61106478	chunk0082_413_1	16.87165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	61106235	61106581	-22150860	+	Tigger3a	DNA	TcMar-Tigger	1	344	-4	1
chr17	61360533	61360534	chunk0082_422_1	5.14476	AR_DHT_Control	chr17	61360398	61360762	-21896679	-	MLT1B	LTR	ERVL-MaLR	-2	388	60	1
chr17	61432134	61432135	chunk0082_428_1	221.79965	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	61431320	61432318	-21825123	-	Tigger4	DNA	TcMar-Tigger	-692	2039	1064	1
chr17	61504120	61504121	chunk0082_432_1	7.43227	AR_DHT_Control	chr17	61503553	61504273	-21753168	-	Tigger3b	DNA	TcMar-Tigger	-461	770	20	1
chr17	61542478	61542479	chunk0082_434_1	21.925	AR_DHT_Control	chr17	61542432	61543019	-21714422	-	L1MC1	LINE	L1	-423	5910	5308	1
chr17	61906493	61906494	chunk0082_443_1	5.6425	AR_DHT_Control	chr17	61905996	61906638	-21350803	-	Tigger6a	DNA	TcMar-Tigger	-305	778	6	1
chr17	62511735	62511736	chunk0083_3_1	47.5325	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	62511669	62512213	-20745228	-	L1MD2	LINE	L1	-462	5897	5365	1
chr17	62830765	62830766	chunk0083_12_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	62830431	62830842	-20426599	-	L1MC3	LINE	L1	0	6344	5922	1
chr17	63005353	63005354	chunk0083_17_1	63.5049	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	63005080	63005684	-20251757	-	L1ME2z	LINE	L1	-1107	5899	5273	1
chr17	63036105	63036106	chunk0083_19_1	42.649	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	63035470	63036867	-20220574	-	L1ME1	LINE	L1	-290	5889	4393	1
chr17	63259005	63259006	chunk0083_32_1	81.2859	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	63258439	63259526	-19997915	-	L1MA4A	LINE	L1	-6047	1518	13	1
chr17	63503464	63503465	chunk0083_43_1	56.91647	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	63502947	63503507	-19753934	+	LTR24C	LTR	ERV1	1	635	0	1
chr17	64051321	64051322	chunk0083_65_1	14.7449	AR_DHT_Control	chr17	64050913	64052084	-19205357	+	L1MC4	LINE	L1	6830	8005	-37	1
chr17	64150397	64150398	chunk0083_75_1	9.28752	AR_DHT_Control	chr17	64150322	64150444	-19106997	+	L2c	LINE	L2	3273	3386	-1	1
chr17	64255086	64255087	chunk0083_85_1	27.7264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	64254857	64255164	-19002277	-	AluJr	SINE	Alu	-8	304	1	1
chr17	64385808	64385809	chunk0083_94_1	7.19831	AR_DHT_Control	chr17	64385567	64385904	-18871537	-	L2c	LINE	L2	-7	3380	2959	1
chr17	64450856	64450857	chunk0083_95_1	8.95381	AR_DHT_Control	chr17	64450781	64451137	-18806304	-	L1ME3G	LINE	L1	-352	572	213	1
chr17	64516026	64516027	chunk0083_98_1	7.22694	AR_DHT_Control	chr17	64515900	64516085	-18741356	+	MIRb	SINE	MIR	47	268	0	1
chr17	64618961	64618962	chunk0083_104_1	12.5616	AR_DHT_Control	chr17	64618848	64619129	-18638312	+	MIR	SINE	MIR	2	262	0	1
chr17	64627036	64627037	chunk0083_108_1	70.8673	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	64626986	64627102	-18630339	+	MLT1G1	LTR	ERVL-MaLR	411	525	-54	1
chr17	64706743	64706744	chunk0083_109_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	64706241	64706961	-18550480	+	L2a	LINE	L2	2727	3426	0	1
chr17	64720449	64720450	chunk0083_111_1	10.1791	AR_DHT_Control	chr17	64719795	64720798	-18536643	+	L1ME3C	LINE	L1	4768	5867	-256	1
chr17	65023031	65023032	chunk0083_120_1	76.44914	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	65022033	65023974	-18233467	+	Cheshire	DNA	hAT-Charlie	1	2031	-389	1
chr17	65035352	65035353	chunk0083_123_1	13.41336	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	65035345	65035504	-18221937	+	L1ME4a	LINE	L1	5854	6039	-85	1
chr17	65239727	65239728	chunk0083_127_1	4.5547	AR_DHT_Control	chr17	65239574	65239811	-18017630	+	MIR	SINE	MIR	17	252	-10	1
chr17	65417707	65417708	chunk0083_130_1	4.46365	AR_DHT_Control	chr17	65417605	65417715	-17839726	-	MIR3	SINE	MIR	-58	150	44	1
chr17	65441437	65441438	chunk0083_131_1	65.5293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65441413	65441606	-17815835	-	MIR	SINE	MIR	-5	257	64	1
chr17	65463454	65463455	chunk0083_132_1	6.67113	AR_DHT_Control	chr17	65463342	65463460	-17793981	-	MamSINE1	SINE	tRNA-RTE	-165	125	2	1
chr17	65770609	65770610	chunk0083_143_1	35.663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65769989	65770885	-17486556	+	L1MEc	LINE	L1	1213	2208	-4111	1
chr17	65785302	65785303	chunk0083_147_1	107.6587	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65784787	65785542	-17471899	-	L1MB7	LINE	L1	0	6184	5425	1
chr17	65840705	65840706	chunk0083_151_1	11.643	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65838153	65841794	-17415647	+	L1MA4	LINE	L1	4059	7713	-6	1
chr17	65931995	65931996	chunk0083_155_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	65931170	65932481	-17324960	+	L1MA7	LINE	L1	1216	2539	-4957	1
chr17	65944226	65944227	chunk0083_157_1	11.2084	AR_DHT_Control	chr17	65944006	65944325	-17313116	+	L1PA10	LINE	L1	5790	6157	-11	1
chr17	65978455	65978456	chunk0083_159_1	33.7572	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65978380	65978615	-17278826	+	MIRc	SINE	MIR	16	267	-1	1
chr17	65986960	65986961	chunk0083_161_1	56.0026	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	65986097	65987431	-17270010	+	L1M6	LINE	L1	12	1347	-5149	1
chr17	65990570	65990571	chunk0083_163_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	65990226	65990955	-17266486	+	L1M1	LINE	L1	19	776	-6789	1
chr17	66061599	66061600	chunk0083_167_1	41.7501	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	66061595	66061842	-17195599	+	L1MA6	LINE	L1	5787	6048	-252	1
chr17	66144044	66144045	chunk0083_168_1	5.6425	AR_DHT_Control	chr17	66143098	66144082	-17113359	+	MLT1F2-int	LTR	ERVL-MaLR	291	1309	-180	1
chr17	66177178	66177179	chunk0083_171_1	8.46929	AR_DHT_Control	chr17	66177115	66177328	-17080113	-	MER58A	DNA	hAT-Charlie	-1	223	1	1
chr17	66298744	66298745	chunk0083_173_1	97.32024	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	66298082	66298779	-16958662	-	L1ME4b	LINE	L1	-185	707	33	1
chr17	66348595	66348596	chunk0083_178_1	4.73472	AR_DHT_Control	chr17	66348567	66348841	-16908600	-	Tigger19a	DNA	TcMar-Tigger	-16	307	5	1
chr17	66373255	66373256	chunk0083_180_1	18.71365	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	66373231	66373409	-16884032	-	MIRb	SINE	MIR	-1	267	78	1
chr17	66376145	66376146	chunk0083_182_1	6.9031	AR_DHT_Control	chr17	66376072	66376226	-16881215	+	MER5A	DNA	hAT-Charlie	7	183	-6	1
chr17	66467405	66467406	chunk0083_186_1	15.35512	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	66467386	66467431	-16790010	+	MIR3	SINE	MIR	118	163	-45	1
chr17	66474997	66474998	chunk0083_187_1	11.9502	AR_DHT_Control	chr17	66474947	66475586	-16781855	-	L3	LINE	CR1	-199	3900	3193	1
chr17	66509055	66509056	chunk0083_190_1	31.20301	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	66509019	66509134	-16748307	-	MLT1H2	LTR	ERVL-MaLR	-290	199	63	1
chr17	66702611	66702612	chunk0083_204_1	19.53454	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	66702211	66702687	-16554754	+	L1MA9	LINE	L1	5840	6330	-46	1
chr17	67079675	67079676	chunk0083_219_1	5.00158	AR_DHT_Control	chr17	67079606	67079925	-16177516	-	L1ME4a	LINE	L1	-521	5603	5255	1
chr17	67110684	67110685	chunk0083_220_1	20.5155	AR_DHT_Control	chr17	67110663	67110854	-16146587	+	MER58A	DNA	hAT-Charlie	28	224	0	1
chr17	67382022	67382023	chunk0083_226_1	106.1496	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	67381943	67382040	-15875401	-	MIRc	SINE	MIR	-109	159	63	1
chr17	67511097	67511098	chunk0083_234_1	19.22774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	67510995	67511512	-15745929	-	L1ME3G	LINE	L1	-267	657	233	1
chr17	67557178	67557179	chunk0083_236_1	6.17368	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	67557040	67557377	-15700064	-	MLT1A	LTR	ERVL-MaLR	-11	363	1	1
chr17	67585237	67585238	chunk0083_238_1	5.08049	AR_DHT_Control	chr17	67585136	67585338	-15672103	-	L2a	LINE	L2	-85	3341	3091	1
chr17	67742280	67742281	chunk0083_245_1	14.5882	AR_DHT_Control	chr17	67741892	67742724	-15514717	-	L1MC4a	LINE	L1	-2038	5844	4920	1
chr17	68614977	68614978	chunk0083_279_1	30.9521	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	68614969	68615071	-14642370	-	MLT1D	LTR	ERVL-MaLR	0	467	363	1
chr17	68647305	68647306	chunk0083_281_1	33.17987	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	68647167	68647668	-14609773	-	LTR22B	LTR	ERVK	-4	488	2	1
chr17	68648174	68648175	chunk0083_283_1	6.17368	AR_DHT_Control	chr17	68647849	68648441	-14609000	+	L1ME1	LINE	L1	5551	6177	-2	1
chr17	68690196	68690197	chunk0083_285_1	25.55801	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	68690053	68690226	-14567215	-	MER58A	DNA	hAT-Charlie	-6	218	46	1
chr17	69240069	69240070	chunk0083_292_1	158.89402	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	69239638	69240333	-14017108	-	ERV3-16A3_I-int	LTR	ERVL	-3782	1444	706	1
chr17	69266366	69266367	chunk0083_294_1	11.088	AR_DHT_Control	chr17	69265815	69266472	-13990969	+	L1MD1	LINE	L1	5524	6241	-1	1
chr17	69269440	69269441	chunk0083_296_1	24.41685	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	69269429	69270101	-13987340	+	L1MB8	LINE	L1	5526	6172	-6	1
chr17	69334905	69334906	chunk0083_300_1	8.02791	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	69334883	69334907	-13922534	+	(CT)n	Simple_repeat	Simple_repeat	1	24	0	1
chr17	69498831	69498832	chunk0083_315_1	31.03045	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	69498693	69499088	-13758353	-	MER54B	LTR	ERVL	-483	418	1	1
chr17	69579454	69579455	chunk0083_324_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	69579413	69579624	-13677817	+	MIR	SINE	MIR	6	259	-3	1
chr17	69713956	69713957	chunk0083_325_1	6.23615	AR_DHT_Control	chr17	69713954	69714028	-13543413	+	MIR	SINE	MIR	184	259	-3	1
chr17	69713956	69713957	chunk0083_325_1	6.23615	AR_DHT_Control	chr17	69713863	69713968	-13543473	+	L2a	LINE	L2	3314	3426	0	1
chr17	69960873	69960874	chunk0083_328_1	8.52761	AR_DHT_Control	chr17	69960585	69960998	-13296443	-	LTR16A	LTR	ERVL	-6	445	14	1
chr17	70095563	70095564	chunk0083_331_1	24.01498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	70095222	70095676	-13161765	+	MER89	LTR	ERV1	1	559	0	1
chr17	70192937	70192938	chunk0083_335_1	8.35315	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	70192719	70193175	-13064266	-	L1M5	LINE	L1	-3419	2727	2248	1
chr17	70300578	70300579	chunk0083_347_1	17.0938	AR_DHT_Control	chr17	70299956	70302320	-12955121	-	L1MCc	LINE	L1	-1332	5609	3179	1
chr17	70302400	70302401	chunk0083_348_1	13.6601	AR_DHT_Control	chr17	70302320	70302466	-12954975	-	L1MC1	LINE	L1	-1	6332	6188	1
chr17	70387950	70387951	chunk0083_353_1	17.693	AR_DHT_Control	chr17	70387589	70388100	-12869341	-	Zaphod	DNA	hAT-Tip100	-3508	523	2	1
chr17	70421091	70421092	chunk0083_354_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	70420702	70421128	-12836313	-	ERV3-16A3_I-int	LTR	ERVL	-843	4383	3871	1
chr17	70492466	70492467	chunk0083_357_1	17.8225	AR_DHT_Control	chr17	70492155	70492469	-12764972	+	L1MB8	LINE	L1	5467	5779	-399	1
chr17	70579519	70579520	chunk0083_358_1	6.6833	AR_DHT_Control	chr17	70579300	70579783	-12677658	+	L2c	LINE	L2	2792	3287	-100	1
chr17	70617590	70617591	chunk0083_360_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	70617294	70617610	-12639831	+	LTR78	LTR	ERV1	70	406	-898	1
chr17	71460472	71460473	chunk0083_379_1	8.0668	AR_DHT_Control	chr17	71460210	71460544	-11796897	-	L1PA13	LINE	L1	-11	6152	5829	1
chr17	71517849	71517850	chunk0083_383_1	17.6756	AR_DHT_Control	chr17	71517779	71517979	-11739462	-	MER58A	DNA	hAT-Charlie	-23	201	1	1
chr17	71572999	71573000	chunk0083_385_1	20.3286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	71572999	71573042	-11684399	+	(TG)n	Simple_repeat	Simple_repeat	1	43	0	1
chr17	71580953	71580954	chunk0083_389_1	17.46358	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	71580880	71581276	-11676165	+	MER57B1	LTR	ERV1	1	401	0	1
chr17	71584378	71584379	chunk0083_390_1	8.49128	AR_DHT_Control	chr17	71584189	71584473	-11672968	+	L1ME4a	LINE	L1	5639	5948	-176	1
chr17	71657352	71657353	chunk0083_394_1	7.37742	AR_DHT_Control	chr17	71657188	71657388	-11600053	+	L1MEi	LINE	L1	5	213	-1999	1
chr17	71993734	71993735	chunk0083_405_1	74.3552	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	71992645	71994383	-11263058	+	L1P4e	LINE	L1	284	2003	-4782	1
chr17	72131169	72131170	chunk0083_409_1	41.5389	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	72131087	72131304	-11126137	+	MER58A	DNA	hAT-Charlie	1	224	0	1
chr17	72428818	72428819	chunk0083_424_1	52.4964	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	72428765	72428847	-10828594	+	MIRb	SINE	MIR	187	268	0	1
chr17	72434772	72434773	chunk0083_426_1	12.0334	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	72434653	72434782	-10822659	+	L1ME4a	LINE	L1	5920	6054	-70	1
chr17	72534911	72534912	chunk0083_431_1	21.49367	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	72534630	72535036	-10722405	+	L2b	LINE	L2	2972	3374	-1	1
chr17	72660933	72660934	chunk0083_439_1	19.6069	AR_DHT_Control	chr17	72660724	72660941	-10596500	-	MER20	DNA	hAT-Charlie	0	219	1	1
chr17	72676579	72676580	chunk0083_442_1	13.8979	AR_DHT_Control	chr17	72676545	72677104	-10580337	+	MER68	LTR	ERVL	3	563	0	1
chr17	72935090	72935091	chunk0083_448_1	6.22495	AR_DHT_Control	chr17	72934675	72935538	-10321903	+	L1ME1	LINE	L1	5278	6151	-28	1
chr17	73076003	73076004	chunk0083_450_1	92.6475	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	73075859	73076046	-10181395	+	MIR	SINE	MIR	70	259	-3	1
chr17	73278382	73278383	chunk0084_7_1	40.44007	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	73278255	73278526	-9978915	+	L4_A_Mam	LINE	RTE-X	4701	4981	-9	1
chr17	73341925	73341926	chunk0084_11_1	7.12934	AR_DHT_Control	chr17	73341788	73342038	-9915403	-	MIR	SINE	MIR	-1	261	8	1
chr17	73373107	73373108	chunk0084_15_1	61.0073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	73372785	73373653	-9883788	-	L1MA9	LINE	L1	-34	6278	5363	1
chr17	73427381	73427382	chunk0084_19_1	250.8758	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	73427336	73427530	-9829911	+	MER58A	DNA	hAT-Charlie	37	224	0	1
chr17	73564989	73564990	chunk0084_28_1	17.59046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	73564940	73565638	-9691803	+	L1MEb	LINE	L1	153	1236	-1343	1
chr17	73566389	73566390	chunk0084_30_1	53.1039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	73566356	73566404	-9691037	+	MSTB	LTR	ERVL-MaLR	376	425	-1	1
chr17	73634810	73634811	chunk0084_31_1	63.6042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	73634769	73634983	-9622458	-	MIR	SINE	MIR	-4	258	38	1
chr17	73704594	73704595	chunk0084_32_1	5.58563	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	73704381	73704907	-9552534	+	MLT1H1	LTR	ERVL-MaLR	1	552	-3	1
chr17	73796876	73796877	chunk0084_33_1	8.0483	AR_DHT_Control	chr17	73796674	73796945	-9460496	+	L2b	LINE	L2	3099	3375	0	1
chr17	74137706	74137707	chunk0084_44_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	74137191	74138047	-9119394	+	L1ME2	LINE	L1	292	1202	-5416	1
chr17	74193106	74193107	chunk0084_47_1	62.3439	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	74193060	74193183	-9064258	+	L2c	LINE	L2	3267	3387	0	1
chr17	74514215	74514216	chunk0084_58_1	23.59116	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	74514142	74514815	-8742626	+	(TGACAGG)n	Simple_repeat	Simple_repeat	1	685	0	1
chr17	74707246	74707247	chunk0084_63_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	74706864	74707433	-8550008	+	L1M3	LINE	L1	4862	5437	-714	1
chr17	75024930	75024931	chunk0084_76_1	12.1095	AR_DHT_Control	chr17	75023409	75025087	-8232354	+	HERVK14-int	LTR	ERVK	187	1827	-4269	1
chr17	75133141	75133142	chunk0084_80_1	27.4128	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	75133125	75133400	-8124041	+	AluJo	SINE	Alu	2	279	-33	1
chr17	75163465	75163466	chunk0084_84_1	77.11273	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	75163432	75163621	-8093820	+	AluJr	SINE	Alu	97	280	-32	1
chr17	75189520	75189521	chunk0084_88_1	58.41887	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	75189424	75189586	-8067855	-	MIR	SINE	MIR	-6	256	70	1
chr17	75301651	75301652	chunk0084_91_1	5.6425	AR_DHT_Control	chr17	75301631	75301915	-7955526	+	MER1B	DNA	hAT-Charlie	29	339	0	1
chr17	75577877	75577878	chunk0084_98_1	7.36432	AR_DHT_Control	chr17	75577872	75578042	-7679399	-	AluJb	SINE	Alu	-10	302	135	1
chr17	75607834	75607835	chunk0084_100_1	111.8087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	75607760	75608131	-7649310	-	L1MB4	LINE	L1	-501	5679	5307	1
chr17	75984876	75984877	chunk0084_116_1	11.7184	AR_DHT_Control	chr17	75984679	75984941	-7272500	-	MER21-int	LTR	ERVL	-1116	3075	2818	1
chr17	76157673	76157674	chunk0084_124_1	45.5414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	76157671	76157811	-7099630	+	L2b	LINE	L2	3238	3381	-6	1
chr17	76196870	76196871	chunk0084_132_1	243.5397	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	76196621	76197057	-7060384	+	LTR16A1	LTR	ERVL	1	452	-4	1
chr17	76661179	76661180	chunk0084_152_1	90.1184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	76660877	76661397	-6596044	+	L1MC4	LINE	L1	7508	8042	0	1
chr17	76860415	76860416	chunk0084_155_1	4.59338	AR_DHT_Control	chr17	76860399	76860893	-6396548	+	MER87B	LTR	ERV1	1	506	-3	1
chr17	76915155	76915156	chunk0084_157_1	14.99449	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	76915105	76915462	-6341979	-	L2	LINE	L2	-1592	1827	1430	1
chr17	77479061	77479062	chunk0084_174_1	32.22655	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	77478820	77479164	-5778277	+	L1MB2	LINE	L1	5786	6142	-29	1
chr17	77551809	77551810	chunk0084_180_1	133.7815	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	77551809	77552018	-5705423	-	L1ME1	LINE	L1	-2047	5738	5474	1
chr17	77614657	77614658	chunk0084_181_1	18.4237	AR_DHT_Control	chr17	77614481	77614904	-5642537	+	L1MB5	LINE	L1	5749	6172	-2	1
chr17	77622781	77622782	chunk0084_182_1	82.286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	77622665	77623412	-5634029	-	L1MD1	LINE	L1	-346	5896	5165	1
chr17	77728605	77728606	chunk0084_185_1	22.40224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	77728598	77728764	-5528677	+	MER58A	DNA	hAT-Charlie	29	223	-1	1
chr17	77829197	77829198	chunk0084_187_1	15.67593	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	77828431	77829343	-5428098	+	(TG)n	Simple_repeat	Simple_repeat	1	921	0	1
chr17	77852132	77852133	chunk0084_188_1	5.48709	AR_DHT_Control	chr17	77851891	77852499	-5404942	+	(TG)n	Simple_repeat	Simple_repeat	1	611	0	1
chr17	77981869	77981870	chunk0084_192_1	5.6425	AR_DHT_Control	chr17	77981686	77981902	-5275539	+	MER58A	DNA	hAT-Charlie	8	223	-1	1
chr17	78029334	78029335	chunk0084_193_1	15.6663	AR_DHT_Control	chr17	78029229	78029808	-5227633	-	Tigger3	DNA	TcMar-Tigger	-3	3026	2334	1
chr17	78129016	78129017	chunk0084_204_1	5.06979	AR_DHT_Control	chr17	78128963	78129045	-5128396	+	MIRc	SINE	MIR	101	183	-85	1
chr17	78199014	78199015	chunk0084_213_1	24.87669	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	78198931	78199052	-5058389	-	L1ME4b	LINE	L1	-187	705	574	1
chr17	78200768	78200769	chunk0084_214_1	9.54045	AR_DHT_Control	chr17	78200451	78200829	-5056612	+	MLT1C	LTR	ERVL-MaLR	73	467	0	1
chr17	78397855	78397856	chunk0084_225_1	12.3979	AR_DHT_Control	chr17	78397854	78397908	-4859533	-	L2a	LINE	L2	0	3426	3373	1
chr17	78651501	78651502	chunk0084_228_1	11.3067	AR_DHT_Control	chr17	78651435	78651747	-4605694	+	L1ME3G	LINE	L1	41	200	-724	1
chr17	78737210	78737211	chunk0084_238_1	15.14195	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	78737135	78737455	-4519986	-	MER2	DNA	TcMar-Tigger	0	345	2	1
chr17	78763533	78763534	chunk0084_240_1	35.16041	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	78763429	78763768	-4493673	-	MER44A	DNA	TcMar-Tigger	-1	338	7	1
chr17	79033275	79033276	chunk0084_255_1	174.5026	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	79033147	79033319	-4224122	+	MER3	DNA	hAT-Charlie	1	199	-10	1
chr17	79116167	79116168	chunk0084_260_1	10.8761	AR_DHT_Control	chr17	79116045	79116266	-4141175	-	L1MD1	LINE	L1	-1	6241	6000	1
chr17	79629741	79629742	chunk0084_270_1	27.2377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	79629338	79629896	-3627545	+	L1ME4a	LINE	L1	5332	5922	-202	1
chr17	79739144	79739145	chunk0084_276_1	7.11634	AR_DHT_Control	chr17	79738842	79739826	-3517615	-	L2a	LINE	L2	0	3426	2258	1
chr17	79851465	79851466	chunk0084_282_1	39.1492	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	79851175	79851679	-3405762	+	L2a	LINE	L2	2884	3422	-4	1
chr17	79897699	79897700	chunk0084_284_1	39.1976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	79897661	79898110	-3359331	-	L1ME4b	LINE	L1	-91	801	343	1
chr17	79906429	79906430	chunk0084_286_1	4.74993	AR_DHT_Control	chr17	79906009	79906563	-3350878	-	ERV3-16A3_I-int	LTR	ERVL	-2858	2138	1503	1
chr17	79908352	79908353	chunk0084_287_1	12.2295	AR_DHT_Control	chr17	79907610	79908468	-3348973	-	MER45B	DNA	hAT-Tip100	-42	998	107	1
chr17	79909415	79909416	chunk0084_289_1	21.00734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	79909389	79909511	-3347930	-	MER45R	DNA	hAT-Tip100	-1458	123	1	1
chr17	79925207	79925208	chunk0084_291_1	4.76227	AR_DHT_Control	chr17	79925117	79925330	-3332111	-	MIRb	SINE	MIR	0	268	55	1
chr17	79960426	79960427	chunk0084_294_1	14.6688	AR_DHT_Control	chr17	79960015	79960476	-3296965	+	L1ME1	LINE	L1	5076	5477	-702	1
chr17	80024476	80024477	chunk0084_299_1	8.75677	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	80024285	80025222	-3232219	+	(CA)n	Simple_repeat	Simple_repeat	1	1002	0	1
chr17	80068789	80068790	chunk0084_305_1	384.40709	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	80068692	80068879	-3188562	-	MamRep605	LTR?	LTR?	-148	701	510	1
chr17	80131267	80131268	chunk0084_308_1	53.12492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	80131235	80131546	-3125895	-	L1MB7	LINE	L1	-2723	3596	3249	1
chr17	80437670	80437671	chunk0084_315_1	13.9652	AR_DHT_Control	chr17	80437626	80438110	-2819331	+	LTR64	LTR	ERV1	11	526	-2	1
chr17	80592280	80592281	chunk0084_317_1	4.38465	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	80592134	80592512	-2664929	-	L2	LINE	L2	-385	3034	2612	1
chr17	80684080	80684081	chunk0084_321_1	11.708	AR_DHT_Control	chr17	80683989	80684404	-2573037	-	L1MC4	LINE	L1	-1823	954	703	1
chr17	80896810	80896811	chunk0084_328_1	18.7845	AR_DHT_Control	chr17	80896643	80896888	-2360553	-	L1M5	LINE	L1	-1449	4697	4444	1
chr17	80930252	80930253	chunk0084_329_1	11.7522	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	80929971	80930312	-2327129	+	(CTCAG)n	Simple_repeat	Simple_repeat	1	313	0	1
chr17	81018420	81018421	chunk0084_331_1	12.40974	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	81018169	81018469	-2238972	+	L1MEg1	LINE	L1	584	896	-5556	1
chr17	81051299	81051300	chunk0084_335_1	12.86447	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	81051298	81051378	-2206063	+	L2	LINE	L2	2727	2805	-614	1
chr17	81299096	81299097	chunk0084_352_1	137.5106	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	81298916	81299182	-1958259	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr17	81335578	81335579	chunk0084_354_1	6.86821	AR_DHT_Control	chr17	81335465	81335648	-1921793	+	MIRb	SINE	MIR	10	231	-37	1
chr17	81793528	81793529	chunk0084_376_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	81792543	81793663	-1463778	+	(CA)n	Simple_repeat	Simple_repeat	1	1175	0	1
chr17	81964811	81964812	chunk0084_383_1	80.95029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	81964412	81964996	-1292445	+	L1MB5	LINE	L1	5440	6027	-147	1
chr17	82110324	82110325	chunk0084_392_1	65.996	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	82110317	82110341	-1147100	+	(A)n	Simple_repeat	Simple_repeat	1	24	0	1
chr17	82134296	82134297	chunk0084_397_1	136.6534	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	82134288	82134512	-1122929	-	MER92-int	LTR	ERV1	-3737	1481	1244	1
chr17	82259282	82259283	chunk0084_408_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr17	82258870	82259399	-998042	-	L1M5	LINE	L1	-1366	4780	4174	1
chr17	82288161	82288162	chunk0084_411_1	21.90244	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr17	82288077	82288197	-969244	+	MLT1B	LTR	ERVL-MaLR	147	268	-122	1
chr17	82426342	82426343	chunk0084_420_1	85.28451	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr17	82426030	82426499	-830942	-	LTR46	LTR	ERV1	0	460	1	1
chr17	82502334	82502335	chunk0084_422_1	9.21264	AR_DHT_Control	chr17	82502298	82502473	-754968	-	L1MC3	LINE	L1	-1009	6776	6597	1
chr17	82507939	82507940	chunk0084_423_1	7.36432	AR_DHT_Control	chr17	82507499	82507971	-749470	+	LOR1a	LTR	ERV1	1	497	0	1
chr17	82522186	82522187	chunk0084_424_1	19.9329	AR_DHT_Control	chr17	82522119	82522241	-735200	-	AluJo	SINE	Alu	-5	307	182	1
chr17	82531646	82531647	chunk0084_426_1	10.2576	AR_DHT_Control	chr17	82531427	82531846	-725595	-	Tigger3b	DNA	TcMar-Tigger	0	1231	788	1
chr17	82636749	82636750	chunk0084_431_1	31.41247	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	82636641	82637170	-620271	+	LTR10G	LTR	ERV1	1	520	-3	1
chr17	82745636	82745637	chunk0084_436_1	21.50739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	82745497	82745811	-511630	-	L1ME1	LINE	L1	-297	5882	5587	1
chr17	83046714	83046715	chunk0084_451_1	47.6582	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr17	83046436	83047055	-210386	+	L1MB5	LINE	L1	6227	6844	-190	1
chr18	108427	108428	chunk0084_1_1	27.1768	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
chr18	109197	109198	chunk0084_2_1	48.37939	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
chr18	110646	110647	chunk0084_4_1	11.3818	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
chr18	110895	110896	chunk0084_5_1	8.96809	Merged_Lncap_AR_Veh	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
chr18	111373	111374	chunk0084_6_1	18.26998	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	105673	111670	-80261615	-	BSR/Beta	Satellite	Satellite	-42	5974	1	1
chr18	150978	150979	chunk0085_1_1	42.6864	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	150919	150981	-80222304	+	A-rich	Low_complexity	Low_complexity	1	67	0	1
chr18	167393	167394	chunk0085_5_1	40.4047	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	167341	167515	-80205770	-	L1M5	LINE	L1	-1538	4608	4441	1
chr18	249931	249932	chunk0085_12_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	249881	250053	-80123232	+	L4_C_Mam	LINE	RTE-X	4790	4975	-163	1
chr18	291450	291451	chunk0085_14_1	26.23423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	291293	291798	-80081487	-	Charlie29a	DNA	hAT-Charlie	0	719	237	1
chr18	330013	330014	chunk0085_17_1	9.45492	AR_DHT_Control	chr18	329795	330103	-80043182	+	AluJr	SINE	Alu	1	306	-6	1
chr18	766149	766150	chunk0085_43_1	7.08265	AR_DHT_Control	chr18	766063	766350	-79606935	+	MLT1L	LTR	ERVL-MaLR	19	357	-253	1
chr18	769822	769823	chunk0085_44_1	9.69453	AR_DHT_Control	chr18	769250	769954	-79603331	-	L1MEc	LINE	L1	-1813	4506	3787	1
chr18	770750	770751	chunk0085_45_1	8.75876	AR_DHT_Control	chr18	770523	770775	-79602510	-	L1MEc	LINE	L1	-6035	365	108	1
chr18	781436	781437	chunk0085_48_1	10.1564	AR_DHT_Control	chr18	781358	781642	-79591643	+	L2b	LINE	L2	3045	3372	-15	1
chr18	824472	824473	chunk0085_51_1	56.7143	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	824192	824497	-79548788	+	AluJo	SINE	Alu	1	294	-18	1
chr18	845294	845295	chunk0085_53_1	6.98475	AR_DHT_Control	chr18	845247	846073	-79527212	+	L4_C_Mam	LINE	RTE-X	1612	2521	-2617	1
chr18	1099891	1099892	chunk0085_62_1	5.6425	AR_DHT_Control	chr18	1099735	1100016	-79273269	+	L2b	LINE	L2	3072	3374	-1	1
chr18	1254039	1254040	chunk0085_64_1	14.99213	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	1253831	1254208	-79119077	+	LTR101_Mam	LTR	ERVL	8	391	-438	1
chr18	1270149	1270150	chunk0085_66_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	1270148	1270200	-79103085	-	L2c	LINE	L2	0	3387	3339	1
chr18	1347824	1347825	chunk0085_67_1	5.54137	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	1347781	1348004	-79025281	-	L1ME4b	LINE	L1	-656	236	1	1
chr18	1560399	1560400	chunk0085_73_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	1559279	1560992	-78812293	-	L1PA17	LINE	L1	-5157	2058	345	1
chr18	1578153	1578154	chunk0085_74_1	22.1502	AR_DHT_Control	chr18	1578096	1578316	-78794969	+	L2c	LINE	L2	3152	3422	-4	1
chr18	2070755	2070756	chunk0085_76_1	13.2288	AR_DHT_Control	chr18	2070620	2070880	-78302405	-	MamRTE1	LINE	RTE-BovB	-231	3581	3293	1
chr18	2099768	2099769	chunk0085_77_1	6.6833	AR_DHT_Control	chr18	2097231	2100471	-78272814	+	L1MEc	LINE	L1	1604	4918	-1401	1
chr18	2118751	2118752	chunk0085_79_1	21.9291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	2118140	2119844	-78253441	+	L1ME3Cz	LINE	L1	1	741	-256	1
chr18	2255233	2255234	chunk0085_81_1	9.21264	AR_DHT_Control	chr18	2253245	2256156	-78117129	+	L1PB1	LINE	L1	3907	6865	-2	1
chr18	2385789	2385790	chunk0085_85_1	11.1716	AR_DHT_Control	chr18	2385133	2385813	-77987472	+	L1ME1	LINE	L1	256	926	-1826	1
chr18	2533286	2533287	chunk0085_88_1	265.5067	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	2532692	2533396	-77839889	+	MLT1E2-int	LTR	ERVL-MaLR	2	801	-688	1
chr18	2613120	2613121	chunk0085_93_1	22.34136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	2613113	2613326	-77759959	+	MER58A	DNA	hAT-Charlie	1	215	-9	1
chr18	2658235	2658236	chunk0085_94_1	7.86105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	2658090	2658254	-77715031	-	L1ME4c	LINE	L1	-381	449	278	1
chr18	2684452	2684453	chunk0085_95_1	11.9693	AR_DHT_Control	chr18	2684398	2684700	-77688585	-	L1MEc	LINE	L1	-3793	2526	2197	1
chr18	2693450	2693451	chunk0085_97_1	53.65672	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	2693272	2693578	-77679707	-	Tigger3a	DNA	TcMar-Tigger	-10	338	1	1
chr18	2733747	2733748	chunk0085_100_1	97.8448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	2733732	2733788	-77639497	-	Tigger9b	DNA	TcMar-Tigger	-568	56	1	1
chr18	2741823	2741824	chunk0085_101_1	7.30744	AR_DHT_Control	chr18	2741776	2742119	-77631166	+	L2	LINE	L2	1698	2069	-1350	1
chr18	2755996	2755997	chunk0085_104_1	5.47313	AR_DHT_Control	chr18	2755866	2756597	-77616688	-	L1ME3B	LINE	L1	-1984	4162	3407	1
chr18	2806671	2806672	chunk0085_112_1	60.0668	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	2806664	2806909	-77566376	+	L1PA16	LINE	L1	5870	6157	-9	1
chr18	2968237	2968238	chunk0085_120_1	9.24875	AR_DHT_Control	chr18	2967941	2968323	-77404962	+	L4_C_Mam	LINE	RTE-X	141	534	-4604	1
chr18	3057286	3057287	chunk0085_126_1	23.0393	AR_DHT_Control	chr18	3057067	3057290	-77315995	+	MIR	SINE	MIR	4	243	-19	1
chr18	3148383	3148384	chunk0085_131_1	9.90105	AR_DHT_Control	chr18	3148324	3148565	-77224720	+	L1ME1	LINE	L1	5992	6246	-106	1
chr18	3153439	3153440	chunk0085_133_1	18.9753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	3153213	3153460	-77219825	+	MIRb	SINE	MIR	8	259	-9	1
chr18	3162376	3162377	chunk0085_134_1	7.86105	AR_DHT_Control	chr18	3162118	3162569	-77210716	+	MER74B	LTR	ERVL	66	548	-74	1
chr18	3257508	3257509	chunk0085_141_1	6.24504	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	3257473	3257521	-77115764	-	L2b	LINE	L2	-6	3369	3321	1
chr18	3341130	3341131	chunk0085_147_1	27.21602	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	3340911	3341267	-77032018	+	L1PA13	LINE	L1	5801	6163	0	1
chr18	3671403	3671404	chunk0085_160_1	14.90961	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	3671386	3671487	-76701798	+	L2b	LINE	L2	3269	3374	-1	1
chr18	3722547	3722548	chunk0085_163_1	19.12827	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	3722120	3722824	-76650461	+	LTR83	LTR	ERVL	31	778	-2	1
chr18	3740826	3740827	chunk0085_165_1	6.48643	AR_DHT_Control	chr18	3740679	3741642	-76631643	+	(ACC)n	Simple_repeat	Simple_repeat	1	977	0	1
chr18	3973873	3973874	chunk0085_168_1	8.09329	AR_DHT_Control	chr18	3973814	3974073	-76399212	-	Tigger3a	DNA	TcMar-Tigger	-1	347	86	1
chr18	4510883	4510884	chunk0085_171_1	31.4211	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	4510684	4511029	-75862256	+	(GTG)n	Simple_repeat	Simple_repeat	1	370	0	1
chr18	4849199	4849200	chunk0085_172_1	10.1791	AR_DHT_Control	chr18	4848913	4849560	-75523725	+	LTR48B	LTR	ERV1	1	644	0	1
chr18	5031110	5031111	chunk0085_173_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	5030786	5031249	-75342036	-	MLT2B1	LTR	ERVL	-61	459	3	1
chr18	5246228	5246229	chunk0085_176_1	142.8328	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	5246010	5246279	-75127006	-	MLT1H	LTR	ERVL-MaLR	-31	518	250	1
chr18	5659526	5659527	chunk0085_180_1	16.2797	AR_DHT_Control	chr18	5659387	5659607	-74713678	-	L2a	LINE	L2	-7	3419	3175	1
chr18	5788179	5788180	chunk0085_181_1	9.21264	AR_DHT_Control	chr18	5787975	5788516	-74584769	-	LTR49-int	LTR	ERV1	-5759	572	1	1
chr18	6088638	6088639	chunk0085_184_1	6.36517	AR_DHT_Control	chr18	6088607	6088655	-74284630	+	(GAGAAGT)n	Simple_repeat	Simple_repeat	1	48	0	1
chr18	6337501	6337502	chunk0085_189_1	7.2534	AR_DHT_Control	chr18	6337293	6337751	-74035534	+	L1ME3A	LINE	L1	5652	6146	-27	1
chr18	6556524	6556525	chunk0085_198_1	6.67113	AR_DHT_Control	chr18	6556458	6556727	-73816558	-	MIR	SINE	MIR	-9	253	3	1
chr18	6585594	6585595	chunk0085_201_1	7.16019	AR_DHT_Control	chr18	6581928	6587158	-73786127	+	L1PA16	LINE	L1	5	5333	-1150	1
chr18	6688009	6688010	chunk0085_208_1	4.67596	AR_DHT_Control	chr18	6687930	6688182	-73685103	+	L1MC1	LINE	L1	4910	5164	-982	1
chr18	6688997	6688998	chunk0085_209_1	44.6227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	6688499	6689661	-73683624	+	L1MC1	LINE	L1	5165	6332	-1	1
chr18	6893691	6893692	chunk0085_225_1	44.5803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	6893545	6893737	-73479548	+	MIRc	SINE	MIR	54	251	-17	1
chr18	6901390	6901391	chunk0085_227_1	6.93299	AR_DHT_Control	chr18	6901351	6901749	-73471536	+	L1MC3	LINE	L1	7117	7519	-266	1
chr18	6992944	6992945	chunk0085_234_1	287.9799	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	6992865	6993063	-73380222	+	L2c	LINE	L2	3195	3386	-1	1
chr18	7492608	7492609	chunk0085_250_1	65.19857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	7492534	7492665	-72880620	+	MIRb	SINE	MIR	128	259	-9	1
chr18	7719780	7719781	chunk0085_267_1	6.5427	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	7719640	7719914	-72653371	+	L1M4	LINE	L1	4029	4324	-1822	1
chr18	7722325	7722326	chunk0085_269_1	25.92831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	7721839	7722345	-72650940	-	L1MC2	LINE	L1	-17	6327	5812	1
chr18	7904708	7904709	chunk0085_281_1	9.74147	AR_DHT_Control	chr18	7904131	7904803	-72468482	-	L1MD2	LINE	L1	0	6242	5616	1
chr18	7915530	7915531	chunk0085_283_1	65.8991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	7914630	7915550	-72457735	-	L4_C_Mam	LINE	RTE-X	-1100	4038	3053	1
chr18	7921046	7921047	chunk0085_285_1	5.44741	AR_DHT_Control	chr18	7919449	7921381	-72451904	-	L1MA4	LINE	L1	-3225	4337	2354	1
chr18	7941820	7941821	chunk0085_287_1	36.57802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	7941072	7941866	-72431419	-	L3	LINE	CR1	-290	3809	2930	1
chr18	7946845	7946846	chunk0085_291_1	12.87393	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	7946795	7946878	-72426407	+	LTR79	LTR	ERVL	10	99	-428	1
chr18	7959383	7959384	chunk0085_294_1	62.70522	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	7959311	7959534	-72413751	-	L3	LINE	CR1	-2604	1495	1268	1
chr18	7974629	7974630	chunk0085_295_1	8.27376	AR_DHT_Control	chr18	7974488	7974667	-72398618	-	MLT1L	LTR	ERVL-MaLR	-11	599	415	1
chr18	8053988	8053989	chunk0085_298_1	11.022	AR_DHT_Control	chr18	8053197	8054144	-72319141	-	L1ME3F	LINE	L1	-937	5209	4114	1
chr18	8080289	8080290	chunk0085_299_1	213.67595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	8080069	8080292	-72292993	+	L1ME3G	LINE	L1	211	449	-475	1
chr18	8149048	8149049	chunk0085_306_1	12.1886	AR_DHT_Control	chr18	8146320	8152115	-72221170	-	L1PA7	LINE	L1	-675	5794	5	1
chr18	8229232	8229233	chunk0085_310_1	7.19378	AR_DHT_Control	chr18	8229166	8229260	-72144025	-	L2a	LINE	L2	-12	3414	3313	1
chr18	8233031	8233032	chunk0085_311_1	33.56948	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	8232757	8233168	-72140117	-	LTR3A	LTR	ERVK	-62	422	22	1
chr18	8391751	8391752	chunk0085_327_1	60.8439	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	8391737	8392328	-71980957	+	L1MC5a	LINE	L1	1971	2540	-237	1
chr18	8475158	8475159	chunk0085_329_1	4.83274	AR_DHT_Control	chr18	8475111	8475169	-71898116	+	(TTCCCCT)n	Simple_repeat	Simple_repeat	1	58	0	1
chr18	8555623	8555624	chunk0085_334_1	54.0872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	8555089	8555644	-71817641	+	L2a	LINE	L2	2719	3425	-1	1
chr18	8704270	8704271	chunk0085_342_1	269.8083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	8704259	8704444	-71668841	-	MIRc	SINE	MIR	-28	240	33	1
chr18	8803363	8803364	chunk0085_345_1	9.87004	AR_DHT_Control	chr18	8803242	8803467	-71569818	+	MIRb	SINE	MIR	35	268	0	1
chr18	8963317	8963318	chunk0085_348_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	8962914	8963337	-71409948	-	LTR16B2	LTR	ERVL	0	462	1	1
chr18	9067826	9067827	chunk0085_351_1	9.08114	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	9067560	9067848	-71305437	-	AluSx	SINE	Alu	-2	310	1	1
chr18	9174588	9174589	chunk0085_355_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	9173369	9174805	-71198480	-	L1PREC2	LINE	L1	-6848	1307	1	1
chr18	9285945	9285946	chunk0085_358_1	15.79581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	9285538	9286091	-71087194	-	L1ME2	LINE	L1	-1	6163	5578	1
chr18	9352980	9352981	chunk0085_361_1	7.36432	AR_DHT_Control	chr18	9352918	9353267	-71020018	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	1
chr18	9361305	9361306	chunk0085_362_1	18.61	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	9361115	9361848	-71011437	-	HAL1	LINE	L1	-1329	1178	408	1
chr18	9440434	9440435	chunk0085_368_1	12.6499	AR_DHT_Control	chr18	9440366	9440896	-70932389	+	L1MB3	LINE	L1	5599	6155	-28	1
chr18	9461870	9461871	chunk0085_369_1	42.1781	AR_DHT_Control	chr18	9461805	9462071	-70911214	+	HAL1	LINE	L1	2056	2308	-199	1
chr18	9825926	9825927	chunk0085_383_1	10.3813	AR_DHT_Control	chr18	9825811	9826089	-70547196	+	L1PA16	LINE	L1	5864	6157	-9	1
chr18	9874799	9874800	chunk0085_387_1	26.29656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	9874749	9875046	-70498239	-	Tigger3c	DNA	TcMar-Tigger	-284	318	2	1
chr18	10041324	10041325	chunk0085_398_1	202.126	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	10041166	10041580	-70331705	+	MER70B	LTR	ERVL	4	435	-143	1
chr18	10314377	10314378	chunk0085_408_1	44.7562	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	10314048	10314412	-70058873	+	Tigger13a	DNA	TcMar-Tigger	325	715	-56	1
chr18	10469561	10469562	chunk0085_416_1	26.86	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	10469489	10470229	-69903056	-	L2a	LINE	L2	-5	3421	2598	1
chr18	10721628	10721629	chunk0085_427_1	10.0431	AR_DHT_Control	chr18	10721541	10721720	-69651565	+	L1MD	LINE	L1	4655	4835	-1311	1
chr18	10953681	10953682	chunk0085_436_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	10953624	10954087	-69419198	-	LTR53B	LTR	ERVL	0	533	1	1
chr18	11177690	11177691	chunk0085_446_1	6.54035	AR_DHT_Control	chr18	11177547	11177721	-69195564	-	MIRb	SINE	MIR	-21	247	70	1
chr18	11449872	11449873	chunk0085_451_1	45.7095	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	11447999	11450273	-68923012	+	L1PA16	LINE	L1	3697	6035	-814	1
chr18	11508805	11508806	chunk0085_453_1	6.58135	AR_DHT_Control	chr18	11507672	11509632	-68863653	+	L1ME1	LINE	L1	3544	5577	-602	1
chr18	11597914	11597915	chunk0085_457_1	35.7712	AR_DHT_Control	chr18	11597913	11598284	-68775001	+	L1MCa	LINE	L1	245	622	-6129	1
chr18	11925242	11925243	chunk0086_2_1	20.8382	AR_DHT_Control	chr18	11925093	11925347	-68447938	+	Tigger3	DNA	TcMar-Tigger	2747	3028	-1	1
chr18	11976764	11976765	chunk0086_6_1	221.2102	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	11976762	11976886	-68396399	-	OldhAT1	DNA	hAT-Ac	-2321	527	402	1
chr18	12414283	12414284	chunk0086_25_1	50.05956	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	12413883	12414435	-67958850	-	Charlie1a	DNA	hAT-Charlie	-811	644	107	1
chr18	12430851	12430852	chunk0086_26_1	6.46845	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	12430303	12431106	-67942179	+	(TG)n	Simple_repeat	Simple_repeat	1	831	0	1
chr18	12480483	12480484	chunk0086_28_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	12480468	12480613	-67892672	+	MIR	SINE	MIR	110	262	0	1
chr18	12573420	12573421	chunk0086_31_1	21.4838	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	12572655	12573637	-67799648	+	L1MC2	LINE	L1	4765	5831	-513	1
chr18	12574934	12574935	chunk0086_32_1	6.17841	AR_DHT_Control	chr18	12574844	12574995	-67798290	-	L2-3_Crp	LINE	L2	-1167	929	777	1
chr18	12599743	12599744	chunk0086_35_1	18.6315	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	12599559	12599791	-67773494	-	L1MC4	LINE	L1	-414	7628	7366	1
chr18	12606259	12606260	chunk0086_38_1	136.3636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	12605802	12606325	-67766960	+	L2a	LINE	L2	2841	3400	-26	1
chr18	12640443	12640444	chunk0086_39_1	24.48651	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	12640424	12641122	-67732163	-	L2b	LINE	L2	-1	3374	2601	1
chr18	12675571	12675572	chunk0086_45_1	38.5462	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	12675524	12675619	-67697666	-	L2c	LINE	L2	-8	3379	3289	1
chr18	12811019	12811020	chunk0086_47_1	21.5753	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	12811004	12811217	-67562068	-	MIR	SINE	MIR	-17	245	39	1
chr18	12883131	12883132	chunk0086_50_1	19.2122	AR_DHT_Control	chr18	12883123	12883265	-67490020	+	L1ME1	LINE	L1	6015	6165	-14	1
chr18	12954880	12954881	chunk0086_52_1	4.6472	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	12954793	12955016	-67418269	-	L1MB7	LINE	L1	-16	6168	5945	1
chr18	13026853	13026854	chunk0086_61_1	127.4989	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	13025516	13027712	-67345573	-	L1MB2	LINE	L1	-4295	2213	2	1
chr18	13043045	13043046	chunk0086_63_1	56.01991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	13042492	13043354	-67329931	-	L1ME3D	LINE	L1	-1	6336	5349	1
chr18	13052166	13052167	chunk0086_64_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	13051995	13052169	-67321116	+	MLT1G3	LTR	ERVL-MaLR	1	178	-417	1
chr18	13112021	13112022	chunk0086_67_1	62.4651	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	13111450	13112459	-67260826	+	L1MB5	LINE	L1	4958	5985	-189	1
chr18	13223068	13223069	chunk0086_72_1	186.0477	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	13223063	13223134	-67150151	+	LFSINE_Vert	SINE	tRNA	135	204	-255	1
chr18	13306356	13306357	chunk0086_79_1	53.5634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	13304958	13307427	-67065858	+	Tigger2	DNA	TcMar-Tigger	2	2493	-225	1
chr18	13834471	13834472	chunk0086_96_1	4.88663	AR_DHT_Control	chr18	13834215	13834556	-66538729	+	L1ME4b	LINE	L1	160	500	-392	1
chr18	13900013	13900014	chunk0086_98_1	5.41601	AR_DHT_Control	chr18	13896942	13902287	-66470998	+	L1MA1	LINE	L1	11	5446	-2119	1
chr18	13909838	13909839	chunk0086_99_1	5.3309	AR_DHT_Control	chr18	13908822	13909919	-66463366	-	L1MC3	LINE	L1	-1	7784	6681	1
chr18	13983790	13983791	chunk0086_100_1	35.7231	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	13983557	13984039	-66389246	-	LTR82B	LTR	ERVL	-116	714	188	1
chr18	14095755	14095756	chunk0086_105_1	8.84892	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	14095645	14096441	-66276844	-	L1M3e	LINE	L1	-6646	843	13	1
chr18	14121083	14121084	chunk0086_106_1	77.7999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	14119754	14121485	-66251800	+	L1MA9	LINE	L1	4301	6285	-27	1
chr18	14170507	14170508	chunk0086_108_1	47.19194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	14170422	14170684	-66202601	+	G-rich	Low_complexity	Low_complexity	1	279	0	1
chr18	14432401	14432402	chunk0086_110_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	14432140	14432404	-65940881	+	L4_B_Mam	LINE	RTE-X	4239	4533	-408	1
chr18	20578611	20578612	chunk0086_123_1	8.37121	Merged_Lncap_AR_Veh	chr18	20573105	20582631	-59790654	-	ALR/Alpha	Satellite	centr	-5	9572	1	1
chr18	21020627	21020628	chunk0086_128_1	15.28064	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	21020379	21020821	-59352464	-	L2c	LINE	L2	-2	3385	2972	1
chr18	21074424	21074425	chunk0086_130_1	95.2537	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	21074397	21074724	-59298561	+	L2b	LINE	L2	2920	3282	-105	1
chr18	21100387	21100388	chunk0086_132_1	6.71885	AR_DHT_Control	chr18	21100229	21100594	-59272691	+	L1MC5	LINE	L1	7933	8320	-984	1
chr18	21150664	21150665	chunk0086_136_1	10.1791	AR_DHT_Control	chr18	21150426	21150689	-59222596	-	L1MD3	LINE	L1	-1139	5398	5126	1
chr18	21270849	21270850	chunk0086_141_1	55.6162	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	21270835	21271064	-59102221	-	MIR	SINE	MIR	-13	249	2	1
chr18	21284656	21284657	chunk0086_143_1	77.46898	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	21284162	21285342	-59087943	-	L1MB7	LINE	L1	-4	6180	5047	1
chr18	21391311	21391312	chunk0086_153_1	13.76279	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	21390834	21391488	-58981797	+	Tigger3b	DNA	TcMar-Tigger	556	1231	0	1
chr18	21457485	21457486	chunk0086_154_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	21457456	21457527	-58915758	-	L1ME4a	LINE	L1	-70	6054	5991	1
chr18	21638552	21638553	chunk0086_163_1	99.1191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	21638163	21638587	-58734698	-	MLT2B2	LTR	ERVL	0	515	1	1
chr18	21704700	21704701	chunk0086_166_1	5.56779	AR_DHT_Control	chr18	21704671	21704750	-58668535	+	G-rich	Low_complexity	Low_complexity	1	81	0	1
chr18	21798947	21798948	chunk0086_170_1	35.321	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	21798936	21798979	-58574306	+	(CTGCTTT)n	Simple_repeat	Simple_repeat	1	44	0	1
chr18	21833800	21833801	chunk0086_172_1	138.9961	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	21833747	21833805	-58539480	-	L2b	LINE	L2	-1	3374	3312	1
chr18	21849944	21849945	chunk0086_175_1	6.9063	AR_DHT_Control	chr18	21849839	21850065	-58523220	-	L1MC5a	LINE	L1	-494	2283	2048	1
chr18	22018423	22018424	chunk0086_183_1	15.0038	AR_DHT_Control	chr18	22018393	22018425	-58354860	+	(AAAC)n	Simple_repeat	Simple_repeat	1	32	0	1
chr18	22499678	22499679	chunk0086_216_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	22498950	22500000	-57873285	+	L1MD1	LINE	L1	4958	6101	-141	1
chr18	22510655	22510656	chunk0086_217_1	11.1716	AR_DHT_Control	chr18	22510391	22511497	-57861788	-	L1M4	LINE	L1	-6169	1348	77	1
chr18	22579805	22579806	chunk0086_219_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	22579666	22580538	-57792747	+	FordPrefect	DNA	hAT-Tip100	483	1353	-330	1
chr18	22789181	22789182	chunk0086_233_1	49.7504	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	22788179	22789263	-57584022	+	Tigger6a	DNA	TcMar-Tigger	4	1083	0	1
chr18	23342759	23342760	chunk0086_253_1	3.62043	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	23342073	23342903	-57030382	-	L1MB8	LINE	L1	-23	6155	5318	1
chr18	23386727	23386728	chunk0086_254_1	4.75321	AR_DHT_Control	chr18	23386722	23386758	-56986527	+	A-rich	Low_complexity	Low_complexity	1	36	0	1
chr18	23495216	23495217	chunk0086_263_1	111.9849	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	23494911	23495243	-56878042	-	MLT2B4	LTR	ERVL	-232	324	1	1
chr18	23551832	23551833	chunk0086_266_1	4.88663	AR_DHT_Control	chr18	23551789	23552095	-56821190	-	L2c	LINE	L2	-3	3384	3061	1
chr18	23557855	23557856	chunk0086_267_1	10.2513	AR_DHT_Control	chr18	23557778	23558719	-56814566	+	L1MC4a	LINE	L1	6690	7765	-117	1
chr18	23742207	23742208	chunk0086_287_1	11.2514	AR_DHT_Control	chr18	23742139	23742650	-56630635	+	L1MC4	LINE	L1	7487	7902	-140	1
chr18	23751854	23751855	chunk0086_289_1	19.35796	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	23751793	23752003	-56621282	-	LTR33	LTR	ERVL	-298	217	1	1
chr18	23819007	23819008	chunk0086_291_1	22.2269	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	23818885	23819099	-56554186	-	L1ME4a	LINE	L1	-369	5755	5516	1
chr18	23923510	23923511	chunk0086_299_1	6.43376	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	23923208	23923677	-56449608	-	L2a	LINE	L2	-557	2862	2350	1
chr18	23986759	23986760	chunk0086_303_1	5.40567	AR_DHT_Control	chr18	23986432	23986782	-56386503	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	1
chr18	24033648	24033649	chunk0086_305_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	24033581	24034471	-56338814	+	Tigger6a	DNA	TcMar-Tigger	1	966	-117	1
chr18	24362921	24362922	chunk0086_322_1	5.40815	AR_DHT_Control	chr18	24362744	24363119	-56010166	+	L1M4a1	LINE	L1	7	428	-2151	1
chr18	24425405	24425406	chunk0086_326_1	11.7978	AR_DHT_Control	chr18	24425304	24425562	-55947723	+	Tigger3a	DNA	TcMar-Tigger	69	348	0	1
chr18	24444795	24444796	chunk0086_327_1	11.0019	AR_DHT_Control	chr18	24444687	24444847	-55928438	-	MER53	DNA	hAT	0	193	3	1
chr18	24557805	24557806	chunk0086_328_1	29.117	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	24557709	24557953	-55815332	-	L2a	LINE	L2	0	3426	3132	1
chr18	24661753	24661754	chunk0086_336_1	36.5377	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	24661388	24661950	-55711335	-	L1ME4c	LINE	L1	0	830	274	1
chr18	24799917	24799918	chunk0086_337_1	8.80746	AR_DHT_Control	chr18	24799771	24799924	-55573361	+	L2b	LINE	L2	3211	3374	-1	1
chr18	24869039	24869040	chunk0086_342_1	13.52571	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	24868895	24869290	-55503995	-	Mam_R4	LINE	Dong-R4	-368	3441	3025	1
chr18	25366547	25366548	chunk0086_351_1	14.23745	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	25366383	25366571	-55006714	+	X6A_LINE	LINE	CR1	468	660	-420	1
chr18	25883210	25883211	chunk0086_357_1	28.72085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	25883140	25883255	-54490030	-	MIRb	SINE	MIR	-7	261	141	1
chr18	25974356	25974357	chunk0086_362_1	38.52525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	25974215	25974358	-54398927	+	Charlie15a	DNA	hAT-Charlie	7	160	-64	1
chr18	26035258	26035259	chunk0086_366_1	204.7139	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr18	26035251	26035285	-54338000	+	(AACAA)n	Simple_repeat	Simple_repeat	1	34	0	1
chr18	26073880	26073881	chunk0086_368_1	7.74912	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	26073468	26074778	-54298507	+	Charlie1a	DNA	hAT-Charlie	54	1455	0	1
chr18	26280361	26280362	chunk0086_371_1	16.30283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	26280057	26281270	-54092015	+	L1PA16	LINE	L1	4888	6156	-10	1
chr18	26345187	26345188	chunk0086_374_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	26344694	26345963	-54027322	+	L1MA5A	LINE	L1	781	2603	-4963	1
chr18	26445457	26445458	chunk0086_378_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	26444971	26445820	-53927465	-	L1MEc	LINE	L1	-5486	914	39	1
chr18	26458925	26458926	chunk0086_380_1	11.5199	AR_DHT_Control	chr18	26458634	26459165	-53914120	+	L2	LINE	L2	2458	3037	-382	1
chr18	26507847	26507848	chunk0086_384_1	79.7699	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	26507750	26507951	-53865334	+	L1ME3	LINE	L1	5873	6101	-61	1
chr18	26582486	26582487	chunk0086_391_1	9.15158	AR_DHT_Control	chr18	26582286	26582907	-53790378	+	L1ME4b	LINE	L1	277	784	-108	1
chr18	26631261	26631262	chunk0086_393_1	16.18569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	26631227	26631569	-53741716	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr18	26764357	26764358	chunk0086_405_1	148.7719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	26764168	26764549	-53608736	+	L3	LINE	CR1	2954	3365	-734	1
chr18	26772823	26772824	chunk0086_410_1	9.56998	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	26772702	26772858	-53600427	-	MIR1_Amn	SINE	MIR	-55	175	30	1
chr18	27012589	27012590	chunk0086_417_1	87.9083	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	27012163	27012599	-53360686	-	Tigger2a	DNA	TcMar-Tigger	-2	432	1	1
chr18	27072256	27072257	chunk0086_423_1	4.88663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	27071957	27072350	-53300935	-	MamRTE1	LINE	RTE-BovB	0	3812	3413	1
chr18	27847567	27847568	chunk0086_424_1	19.5595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	27846892	27847573	-52525712	+	L2a	LINE	L2	2641	3387	0	1
chr18	28359250	28359251	chunk0086_435_1	17.75203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	28359225	28359410	-52013875	-	MER58A	DNA	hAT-Charlie	-4	220	20	1
chr18	28633999	28634000	chunk0086_436_1	8.27376	AR_DHT_Control	chr18	28633908	28634055	-51739230	-	MIR	SINE	MIR	-103	159	7	1
chr18	28740279	28740280	chunk0086_439_1	16.92999	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	28740174	28740322	-51632963	-	MER58A	DNA	hAT-Charlie	0	224	42	1
chr18	29003367	29003368	chunk0086_440_1	4.10187	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	29003186	29003602	-51369683	-	MER110	LTR	ERV1	-2	489	79	1
chr18	29085350	29085351	chunk0086_441_1	4.51289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	29085115	29085522	-51287763	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	1
chr18	29707793	29707794	chunk0086_447_1	17.56495	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	29706745	29708431	-50664854	-	L1PB3	LINE	L1	-2466	4449	2643	1
chr18	30028282	30028283	chunk0086_448_1	9.78588	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	30028259	30028308	-50344977	+	(TTTATT)n	Simple_repeat	Simple_repeat	1	51	0	1
chr18	30217971	30217972	chunk0087_4_1	27.74249	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	30217722	30220106	-50153179	-	Tigger1	DNA	TcMar-Tigger	-8	2410	1	1
chr18	30334680	30334681	chunk0087_6_1	7.36432	AR_DHT_Control	chr18	30334653	30335299	-50037986	-	MER50	LTR	ERV1	0	734	1	1
chr18	30695346	30695347	chunk0087_7_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	30694033	30696221	-49677064	-	L1PA13	LINE	L1	-4633	2152	14	1
chr18	30818894	30818895	chunk0087_11_1	47.12157	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	30818757	30819092	-49554193	+	L1ME3A	LINE	L1	5531	5893	-280	1
chr18	30959927	30959928	chunk0087_15_1	9.79111	AR_DHT_Control	chr18	30959902	30960132	-49413153	+	L2	LINE	L2	2604	2884	-535	1
chr18	31034723	31034724	chunk0087_23_1	246.0955	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31034124	31034961	-49338324	+	L1MB7	LINE	L1	5212	6176	-4	1
chr18	31144429	31144430	chunk0087_29_1	83.731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31144318	31144927	-49228358	+	L1MC1	LINE	L1	5698	6266	-67	1
chr18	31205436	31205437	chunk0087_36_1	12.7425	AR_DHT_Control	chr18	31204858	31205438	-49167847	-	L2b	LINE	L2	0	3375	2859	1
chr18	31255125	31255126	chunk0087_37_1	19.08463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	31253876	31255337	-49117948	-	L1MA9	LINE	L1	-30	6282	4826	1
chr18	31300986	31300987	chunk0087_42_1	23.31886	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31300926	31300989	-49072296	+	(AC)n	Simple_repeat	Simple_repeat	1	67	0	1
chr18	31369616	31369617	chunk0087_46_1	287.3271	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	31369478	31370151	-49003134	+	L1ME2	LINE	L1	5413	6089	-270	1
chr18	31421056	31421057	chunk0087_48_1	6.37684	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31420669	31421130	-48952155	-	L1MC4a	LINE	L1	-1980	5902	5454	1
chr18	31575663	31575664	chunk0087_55_1	52.639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	31575582	31575818	-48797467	-	MIRb	SINE	MIR	-28	240	3	1
chr18	31591631	31591632	chunk0087_58_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31591606	31591654	-48781631	+	(TTTTG)n	Simple_repeat	Simple_repeat	1	50	0	1
chr18	31615293	31615294	chunk0087_59_1	19.8505	AR_DHT_Control	chr18	31615213	31615658	-48757627	-	L1MC5a	LINE	L1	-2203	574	114	1
chr18	31630706	31630707	chunk0087_60_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	31630577	31630766	-48742519	-	MIRb	SINE	MIR	-74	194	1	1
chr18	31633625	31633626	chunk0087_61_1	6.48643	AR_DHT_Control	chr18	31633611	31633849	-48739436	+	L2a	LINE	L2	2930	3207	-219	1
chr18	31641559	31641560	chunk0087_63_1	32.21538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	31641533	31641752	-48731533	-	L3b	LINE	CR1	-132	5100	4848	1
chr18	31738971	31738972	chunk0087_65_1	42.84547	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	31738849	31739396	-48633889	+	LTR10A	LTR	ERV1	1	547	-62	1
chr18	32024513	32024514	chunk0087_76_1	7.36432	AR_DHT_Control	chr18	32024494	32024726	-48348559	-	AluJo	SINE	Alu	-66	246	15	1
chr18	32181234	32181235	chunk0087_82_1	9.70003	AR_DHT_Control	chr18	32180522	32181637	-48191648	-	L1MC1	LINE	L1	-10	6498	5447	1
chr18	32293290	32293291	chunk0087_84_1	79.3363	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	32292825	32294442	-48078843	+	L1MC4	LINE	L1	6322	8041	-1	1
chr18	32405785	32405786	chunk0087_94_1	34.62778	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	32405535	32405969	-47967316	+	MLT1J1	LTR	ERVL-MaLR	3	444	0	1
chr18	32496077	32496078	chunk0087_105_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	32495201	32498286	-47874999	-	L1MA2	LINE	L1	-179	6688	3642	1
chr18	32566767	32566768	chunk0087_108_1	26.27919	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	32566452	32566801	-47806484	-	MSTD	LTR	ERVL-MaLR	0	396	1	1
chr18	32694280	32694281	chunk0087_115_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	32694253	32694314	-47678971	+	X6B_LINE	LINE	CR1	535	597	-475	1
chr18	32869138	32869139	chunk0087_119_1	14.8853	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	32869137	32869402	-47503883	-	MER121	DNA	hAT?	-51	350	74	1
chr18	33014237	33014238	chunk0087_120_1	26.7671	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	33013907	33014973	-47358312	+	L1MB7	LINE	L1	377	1463	-6416	1
chr18	33102991	33102992	chunk0087_122_1	21.36002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	33102802	33103023	-47270262	+	MER58A	DNA	hAT-Charlie	1	223	-1	1
chr18	33533006	33533007	chunk0087_126_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	33531863	33533843	-46839442	+	L1PA17	LINE	L1	1453	3393	-3456	1
chr18	33709074	33709075	chunk0087_128_1	11.84725	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	33708998	33709763	-46663522	+	L1ME3A	LINE	L1	5360	6161	-12	1
chr18	33729348	33729349	chunk0087_130_1	15.56151	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	33729245	33729371	-46643914	-	LTR16E2	LTR	ERVL	-216	352	225	1
chr18	33810285	33810286	chunk0087_139_1	7.36432	AR_DHT_Control	chr18	33810172	33810442	-46562843	+	AluJr	SINE	Alu	42	296	-16	1
chr18	33816939	33816940	chunk0087_140_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	33815750	33818177	-46555108	+	ERVL-B4-int	LTR	ERVL	3304	5714	0	1
chr18	34082352	34082353	chunk0087_148_1	15.8249	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	34082246	34082472	-46290813	+	MIR	SINE	MIR	15	256	-6	1
chr18	34102001	34102002	chunk0087_149_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	34101720	34102325	-46270960	+	L2a	LINE	L2	2713	3417	-9	1
chr18	35194644	35194645	chunk0087_174_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	35194572	35194708	-45178577	-	MIRb	SINE	MIR	-28	234	98	1
chr18	35474941	35474942	chunk0087_179_1	21.29942	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	35474698	35475385	-44897900	+	L1MCa	LINE	L1	977	1650	-4858	1
chr18	35481970	35481971	chunk0087_181_1	26.25965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	35481900	35482185	-44891100	-	L1ME2	LINE	L1	-309	5855	5558	1
chr18	35583136	35583137	chunk0087_185_1	51.0521	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	35583030	35583141	-44790144	-	L2a	LINE	L2	-10	3416	3304	1
chr18	35610419	35610420	chunk0087_189_1	63.26051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	35610226	35610538	-44762747	+	L2a	LINE	L2	3059	3413	-13	1
chr18	35620998	35620999	chunk0087_192_1	7.22247	AR_DHT_Control	chr18	35620500	35621171	-44752114	-	L1ME3Cz	LINE	L1	-244	855	220	1
chr18	35767735	35767736	chunk0087_196_1	42.162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	35767148	35768908	-44604377	-	L1MB8	LINE	L1	-6	6172	4413	1
chr18	35785397	35785398	chunk0087_198_1	14.7022	AR_DHT_Control	chr18	35785259	35785506	-44587779	+	L2a	LINE	L2	3013	3352	-74	1
chr18	35788958	35788959	chunk0087_199_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	35788951	35789236	-44584049	-	AluJb	SINE	Alu	-29	283	1	1
chr18	35849564	35849565	chunk0087_201_1	6.48643	AR_DHT_Control	chr18	35849388	35849604	-44523681	+	HERVH-int	LTR	ERV1	5600	5819	-1894	1
chr18	36021381	36021382	chunk0087_210_1	6.98475	AR_DHT_Control	chr18	36021180	36021716	-44351569	+	Tigger1	DNA	TcMar-Tigger	1	611	-1807	1
chr18	36035480	36035481	chunk0087_211_1	6.48643	AR_DHT_Control	chr18	36035308	36035532	-44337753	-	MIR	SINE	MIR	-3	259	3	1
chr18	36044765	36044766	chunk0087_213_1	68.5383	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	36044716	36044957	-44328328	+	L1MC5a	LINE	L1	1450	1703	-1074	1
chr18	36053626	36053627	chunk0087_214_1	15.63962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	36053164	36053719	-44319566	-	L1MB5	LINE	L1	0	6174	5602	1
chr18	36073543	36073544	chunk0087_217_1	27.76944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	36073419	36073544	-44299741	+	MER110-int	LTR	ERV1	4183	4305	-342	1
chr18	36097293	36097294	chunk0087_218_1	217.71489	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	36096746	36097731	-44275554	-	L1ME1	LINE	L1	-42	6137	5169	1
chr18	36120500	36120501	chunk0087_222_1	7.16019	AR_DHT_Control	chr18	36120495	36120674	-44252611	+	Tigger13a	DNA	TcMar-Tigger	127	294	-477	1
chr18	36671088	36671089	chunk0087_241_1	7.96057	AR_DHT_Control	chr18	36668022	36671498	-43701787	-	L1MEc	LINE	L1	-2504	3815	36	1
chr18	36843694	36843695	chunk0087_249_1	81.5707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	36843532	36843756	-43529529	+	MIR	SINE	MIR	3	259	-3	1
chr18	36904609	36904610	chunk0087_251_1	12.93229	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	36904245	36905081	-43468204	-	L1MEc	LINE	L1	-3516	2803	1909	1
chr18	36906828	36906829	chunk0087_253_1	11.3519	AR_DHT_Control	chr18	36906682	36906874	-43466411	-	L1MC3	LINE	L1	-2020	5765	5577	1
chr18	36966068	36966069	chunk0087_256_1	8.27376	AR_DHT_Control	chr18	36966054	36966526	-43406759	+	L1M4a2	LINE	L1	1914	2558	-596	1
chr18	37003448	37003449	chunk0087_257_1	79.78321	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	37002517	37003521	-43369764	+	L1MA4A	LINE	L1	4332	5329	-814	1
chr18	37108329	37108330	chunk0087_261_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	37107820	37108527	-43264758	+	L1PA16	LINE	L1	5437	6164	-2	1
chr18	37152487	37152488	chunk0087_262_1	14.37395	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	37152034	37152600	-43220685	-	MER34B	LTR	ERV1	0	565	1	1
chr18	37221681	37221682	chunk0087_264_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	37221472	37221729	-43151556	+	MIR	SINE	MIR	3	261	-1	1
chr18	37300635	37300636	chunk0087_268_1	14.5208	AR_DHT_Control	chr18	37300569	37300980	-43072305	-	L2a	LINE	L2	-7	3419	2930	1
chr18	37382179	37382180	chunk0087_269_1	5.6503	AR_DHT_Control	chr18	37382090	37382325	-42990960	-	MIR	SINE	MIR	0	262	8	1
chr18	37772257	37772258	chunk0087_274_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	37772198	37772271	-42601014	-	L2b	LINE	L2	-1	3374	3300	1
chr18	37772257	37772258	chunk0087_274_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	37772253	37772336	-42600949	+	MIR	SINE	MIR	172	258	-4	1
chr18	38555429	38555430	chunk0087_279_1	54.9676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	38555332	38555491	-41817794	+	L2c	LINE	L2	3183	3348	-39	1
chr18	38677538	38677539	chunk0087_281_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	38675904	38679558	-41693727	-	L1PBa	LINE	L1	-1762	5100	1297	1
chr18	38720561	38720562	chunk0087_282_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	38720503	38720572	-41652713	+	LTR10C	LTR	ERV1	530	594	-15	1
chr18	38764153	38764154	chunk0087_283_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	38762558	38765303	-41607982	+	L1PB1	LINE	L1	3371	6143	-8	1
chr18	38796904	38796905	chunk0087_286_1	161.417	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	38796800	38797005	-41576280	+	MER20	DNA	hAT-Charlie	1	215	-4	1
chr18	38980494	38980495	chunk0087_294_1	30.8685	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	38980424	38980679	-41392606	+	L2	LINE	L2	1935	2194	-1225	1
chr18	39004933	39004934	chunk0087_297_1	9.21264	AR_DHT_Control	chr18	39004190	39005432	-41367853	+	L1MC4a	LINE	L1	6605	7882	0	1
chr18	39268268	39268269	chunk0087_300_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	39268258	39268782	-41104503	-	Kanga1a	DNA	TcMar-Tc2	-192	562	32	1
chr18	39407063	39407064	chunk0087_307_1	102.4582	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	39406513	39407191	-40966094	+	L2b	LINE	L2	2684	3375	0	1
chr18	39474673	39474674	chunk0087_310_1	28.791	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	39474539	39474723	-40898562	+	MIRb	SINE	MIR	36	247	-21	1
chr18	39682520	39682521	chunk0087_316_1	10.5201	AR_DHT_Control	chr18	39682260	39682725	-40690560	-	L2c	LINE	L2	-8	3379	2920	1
chr18	39719275	39719276	chunk0087_317_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	39716842	39719358	-40653927	-	L1MB8	LINE	L1	-1094	5052	2485	1
chr18	39805344	39805345	chunk0087_321_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	39805254	39805350	-40567935	+	MLT1M	LTR	ERVL-MaLR	3	96	-576	1
chr18	39949310	39949311	chunk0087_326_1	6.83133	AR_DHT_Control	chr18	39949207	39949335	-40423950	+	MIRc	SINE	MIR	95	215	-53	1
chr18	39985501	39985502	chunk0087_327_1	13.9612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	39984952	39985854	-40387431	+	L1ME2z	LINE	L1	3921	4836	-1310	1
chr18	40156167	40156168	chunk0087_337_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40156102	40156185	-40217100	+	(AGATACA)n	Simple_repeat	Simple_repeat	1	86	0	1
chr18	40227268	40227269	chunk0087_338_1	5.00158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40227154	40227884	-40145401	-	L1ME3E	LINE	L1	-408	5834	5078	1
chr18	40227798	40227799	chunk0087_339_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40227154	40227884	-40145401	-	L1ME3E	LINE	L1	-408	5834	5078	1
chr18	40236081	40236082	chunk0087_340_1	3.88975	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40236041	40236148	-40137137	+	L2c	LINE	L2	3268	3387	0	1
chr18	40888499	40888500	chunk0087_350_1	40.2421	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40887699	40888724	-39484561	-	L1MDa	LINE	L1	-4116	2517	992	1
chr18	40890564	40890565	chunk0087_352_1	5.3309	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	40890520	40890812	-39482473	-	L2a	LINE	L2	0	3426	3079	1
chr18	40964521	40964522	chunk0087_353_1	26.95107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	40963938	40965452	-39407833	+	L1PA15	LINE	L1	4656	6163	-2	1
chr18	40975989	40975990	chunk0087_354_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	40973563	40977360	-39395925	-	L1MA4A	LINE	L1	-3246	4316	373	1
chr18	40983164	40983165	chunk0087_357_1	5.54895	AR_DHT_Control	chr18	40982283	40983173	-39390112	-	MER92-int	LTR	ERV1	-4178	1040	104	1
chr18	41237827	41237828	chunk0087_361_1	11.1716	AR_DHT_Control	chr18	41237576	41238080	-39135205	+	L1PA8A	LINE	L1	5614	6131	0	1
chr18	41338538	41338539	chunk0087_363_1	233.4313	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	41338127	41338565	-39034720	+	LTR86A2	LTR	ERVL	41	508	0	1
chr18	41491117	41491118	chunk0087_369_1	6.7293	AR_DHT_Control	chr18	41490307	41491251	-38882034	+	L2a	LINE	L2	867	1921	-1498	1
chr18	41494561	41494562	chunk0087_370_1	26.1779	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	41494441	41494660	-38878625	-	MIRb	SINE	MIR	-30	238	3	1
chr18	41506153	41506154	chunk0087_372_1	27.6376	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	41505962	41506180	-38867105	+	MIRb	SINE	MIR	24	267	-1	1
chr18	41843092	41843093	chunk0087_390_1	22.0485	AR_DHT_Control	chr18	41842470	41843133	-38530152	-	L2c	LINE	L2	0	3387	2650	1
chr18	41889468	41889469	chunk0087_398_1	110.1406	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	41889371	41889513	-38483772	+	L2b	LINE	L2	2935	3082	-305	1
chr18	42018681	42018682	chunk0087_405_1	20.90462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	42018669	42020281	-38353004	+	L2a	LINE	L2	1051	3022	-397	1
chr18	42178074	42178075	chunk0087_411_1	23.26636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	42178049	42178238	-38195047	+	L2a	LINE	L2	3215	3425	-1	1
chr18	42214329	42214330	chunk0087_415_1	9.04976	AR_DHT_Control	chr18	42212853	42216385	-38156900	-	L1PBa	LINE	L1	-3087	3775	258	1
chr18	42217784	42217785	chunk0087_416_1	9.79111	AR_DHT_Control	chr18	42217160	42217971	-38155314	-	HERV16-int	LTR	ERVL	-2703	2293	1359	1
chr18	42231806	42231807	chunk0087_417_1	10.5701	AR_DHT_Control	chr18	42231651	42231872	-38141413	-	L1ME3G	LINE	L1	-411	513	267	1
chr18	42234235	42234236	chunk0087_418_1	9.02033	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	42233829	42235115	-38138170	+	L1PB1	LINE	L1	4793	6079	-72	1
chr18	42260513	42260514	chunk0087_419_1	42.1403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	42260164	42260544	-38112741	-	L1ME4a	LINE	L1	-35	6089	5698	1
chr18	42274848	42274849	chunk0087_425_1	17.90529	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	42274803	42274867	-38098418	-	Penelope1_Vert	LINE	Penelope	-82	1005	943	1
chr18	42340539	42340540	chunk0087_426_1	13.0292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	42340249	42340661	-38032624	-	L3	LINE	CR1	-1435	2664	2253	1
chr18	42342279	42342280	chunk0087_427_1	8.62865	AR_DHT_Control	chr18	42342174	42342909	-38030376	+	LTR48	LTR	ERV1	3	785	-2	1
chr18	42378982	42378983	chunk0087_430_1	216.1681	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	42377270	42381885	-37991400	-	L1PA17	LINE	L1	-1458	4688	4	1
chr18	42529415	42529416	chunk0087_439_1	5.07296	AR_DHT_Control	chr18	42529406	42529508	-37843777	-	MER102a	DNA	hAT-Charlie	-144	186	83	1
chr18	42609369	42609370	chunk0087_442_1	7.0729	AR_DHT_Control	chr18	42609256	42609746	-37763539	-	MLT1D	LTR	ERVL-MaLR	-2	503	1	1
chr18	42645043	42645044	chunk0087_448_1	12.375	AR_DHT_Control	chr18	42644722	42645280	-37728005	+	MER89	LTR	ERV1	2	559	0	1
chr18	42706614	42706615	chunk0087_454_1	11.5199	AR_DHT_Control	chr18	42706552	42707155	-37666130	-	LTR9	LTR	ERV1	0	612	1	1
chr18	42734922	42734923	chunk0087_455_1	15.8928	AR_DHT_Control	chr18	42734564	42735211	-37638074	+	LTR81B	LTR	Gypsy	691	1361	-32	1
chr18	42835369	42835370	chunk0087_464_1	22.6332	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	42835150	42835375	-37537910	+	L1MA9	LINE	L1	6064	6274	-38	1
chr18	43003010	43003011	chunk0088_2_1	8.84892	AR_DHT_Control	chr18	43002714	43003237	-37370048	+	MLT1D	LTR	ERVL-MaLR	1	503	-2	1
chr18	43139108	43139109	chunk0088_7_1	4.2558	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43138667	43139307	-37233978	+	L3	LINE	CR1	3295	4027	-72	1
chr18	43175545	43175546	chunk0088_8_1	51.1771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43175453	43175568	-37197717	-	L2b	LINE	L2	-6	3369	3251	1
chr18	43263786	43263787	chunk0088_15_1	5.9324	AR_DHT_Control	chr18	43260584	43266238	-37107047	-	L1PA7	LINE	L1	-15	6841	388	1
chr18	43389374	43389375	chunk0088_16_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	43389246	43389576	-36983709	+	L1ME3	LINE	L1	438	739	-5676	1
chr18	43484942	43484943	chunk0088_21_1	8.0668	AR_DHT_Control	chr18	43484814	43484976	-36888309	+	LTR18B	LTR	ERVL	14	176	-438	1
chr18	43555278	43555279	chunk0088_22_1	6.58746	AR_DHT_Control	chr18	43553614	43560464	-36812821	-	L1PA15	LINE	L1	-13	6679	77	1
chr18	43579116	43579117	chunk0088_23_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43578991	43579164	-36794121	+	MER63A	DNA	hAT-Blackjack	4	184	-26	1
chr18	43797490	43797491	chunk0088_27_1	42.4817	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43797267	43798267	-36575018	+	L1MEi	LINE	L1	3148	4280	-1866	1
chr18	43803931	43803932	chunk0088_28_1	56.2542	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43802138	43806367	-36566918	-	L1M1	LINE	L1	-2740	4825	17	1
chr18	43820589	43820590	chunk0088_31_1	44.5788	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43820403	43820640	-36552645	-	L1PB1	LINE	L1	-1096	5050	4815	1
chr18	43936414	43936415	chunk0088_44_1	45.1296	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	43936384	43936490	-36436795	+	L1PA13	LINE	L1	6054	6163	0	1
chr18	43984792	43984793	chunk0088_48_1	67.7191	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	43983985	43990386	-36382899	+	L1PA6	LINE	L1	174	6517	0	1
chr18	44253531	44253532	chunk0088_60_1	13.6548	AR_DHT_Control	chr18	44250278	44254065	-36119220	-	L1PA6	LINE	L1	-2	6152	2316	1
chr18	44332131	44332132	chunk0088_62_1	4.83636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	44332034	44334187	-36039098	-	L1PA15	LINE	L1	-720	5445	3256	1
chr18	44343131	44343132	chunk0088_64_1	31.0284	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	44343054	44343257	-36030028	+	Tigger3c	DNA	TcMar-Tigger	401	602	0	1
chr18	44430579	44430580	chunk0088_66_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	44429369	44430904	-35942381	-	L1MC1	LINE	L1	-1253	4893	3334	1
chr18	44516875	44516876	chunk0088_67_1	8.85862	AR_DHT_Control	chr18	44516802	44516939	-35856346	+	MLT1N2	LTR	ERVL-MaLR	422	558	-4	1
chr18	44641380	44641381	chunk0088_72_1	6.25666	AR_DHT_Control	chr18	44641285	44641440	-35731845	+	MLT1J2	LTR	ERVL-MaLR	6	171	-277	1
chr18	44645881	44645882	chunk0088_73_1	16.96817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	44645429	44645978	-35727307	-	L1ME4a	LINE	L1	-60	6064	5512	1
chr18	44840127	44840128	chunk0088_87_1	213.2726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	44840120	44840284	-35533001	-	MIRc	SINE	MIR	-12	256	77	1
chr18	44939271	44939272	chunk0088_94_1	66.5387	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	44939077	44939844	-35433441	-	L1ME2z	LINE	L1	-284	7020	6226	1
chr18	44990013	44990014	chunk0088_100_1	32.4603	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	44989898	44990311	-35382974	+	L1ME3E	LINE	L1	1319	1739	-5364	1
chr18	45330262	45330263	chunk0088_107_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	45330194	45330452	-35042833	+	MamSINE1	SINE	tRNA-RTE	18	275	-15	1
chr18	45396930	45396931	chunk0088_110_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	45396664	45397712	-34975573	-	L1PA14	LINE	L1	0	6161	5106	1
chr18	45779497	45779498	chunk0088_127_1	53.8307	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	45779383	45780126	-34593159	-	L1MEg	LINE	L1	-5348	736	1	1
chr18	45975817	45975818	chunk0088_138_1	8.27376	AR_DHT_Control	chr18	45975730	45975978	-34397307	-	LTR8A	LTR	ERV1	-478	249	1	1
chr18	46030774	46030775	chunk0088_139_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	46030478	46031183	-34342102	-	HAL1b	LINE	L1	-550	1871	1164	1
chr18	46088550	46088551	chunk0088_142_1	7.36432	AR_DHT_Control	chr18	46088309	46089299	-34283986	+	LTR5B	LTR	ERVK	1	1002	0	1
chr18	46250707	46250708	chunk0088_148_1	47.76292	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	46250516	46250805	-34122480	+	L2b	LINE	L2	2637	2959	-460	1
chr18	46432068	46432069	chunk0088_153_1	7.52656	AR_DHT_Control	chr18	46431220	46432115	-33941170	-	HAL1	LINE	L1	-1599	908	2	1
chr18	46468696	46468697	chunk0088_154_1	6.67113	AR_DHT_Control	chr18	46468508	46468939	-33904346	+	HAL1	LINE	L1	56	529	-1978	1
chr18	46632261	46632262	chunk0088_155_1	5.27772	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	46632178	46632305	-33740980	-	MIR	SINE	MIR	-138	124	1	1
chr18	46659589	46659590	chunk0088_156_1	30.4681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	46659467	46659926	-33713359	+	L1ME1	LINE	L1	5488	5971	-208	1
chr18	46676361	46676362	chunk0088_158_1	5.62266	AR_DHT_Control	chr18	46676292	46676420	-33696865	+	L2a	LINE	L2	3279	3409	-17	1
chr18	46702606	46702607	chunk0088_159_1	12.5164	AR_DHT_Control	chr18	46702352	46702811	-33670474	+	L2b	LINE	L2	2804	3311	-76	1
chr18	46790162	46790163	chunk0088_163_1	49.1553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	46789756	46790229	-33583056	+	MER77	LTR	ERVL	1	534	-70	1
chr18	46831361	46831362	chunk0088_166_1	41.9226	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	46831050	46832134	-33541151	+	L1ME1	LINE	L1	4132	5331	-815	1
chr18	46868160	46868161	chunk0088_167_1	7.92341	AR_DHT_Control	chr18	46867681	46868192	-33505093	+	MLT1G3	LTR	ERVL-MaLR	5	525	-70	1
chr18	46877192	46877193	chunk0088_168_1	5.99997	AR_DHT_Control	chr18	46876999	46877281	-33496004	+	HERVI-int	LTR	ERV1	7495	7769	-16	1
chr18	47174928	47174929	chunk0088_171_1	10.179	AR_DHT_Control	chr18	47174796	47175132	-33198153	+	L2c	LINE	L2	3012	3386	-1	1
chr18	47370219	47370220	chunk0088_180_1	52.9622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	47367904	47370654	-33002631	-	Tigger2	DNA	TcMar-Tigger	0	2718	1	1
chr18	47519536	47519537	chunk0088_188_1	182.32	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	47519463	47519681	-32853604	+	L2c	LINE	L2	3167	3371	-16	1
chr18	47842882	47842883	chunk0088_198_1	6.6351	AR_DHT_Control	chr18	47842868	47843018	-32530267	-	L3	LINE	CR1	-230	3869	3718	1
chr18	47858818	47858819	chunk0088_199_1	37.6052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	47858443	47859936	-32513349	+	L1MEf	LINE	L1	2971	4686	-2768	1
chr18	47873547	47873548	chunk0088_201_1	7.80475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	47873243	47873592	-32499693	+	L1M5	LINE	L1	4412	4795	-1351	1
chr18	48000369	48000370	chunk0088_205_1	34.3414	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	48000242	48000770	-32372515	-	Charlie4a	DNA	hAT-Charlie	0	508	1	1
chr18	48155161	48155162	chunk0088_211_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	48155031	48155294	-32217991	-	Tigger15a	DNA	TcMar-Tigger	-428	287	26	1
chr18	48207031	48207032	chunk0088_218_1	126.82524	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	48206681	48207528	-32165757	+	L1ME3	LINE	L1	4955	5864	-298	1
chr18	48250318	48250319	chunk0088_222_1	6.01382	AR_DHT_Control	chr18	48250298	48250501	-32122784	+	MIR	SINE	MIR	64	262	0	1
chr18	48378593	48378594	chunk0088_227_1	24.22216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	48378147	48378910	-31994375	+	HAL1	LINE	L1	339	1186	-1321	1
chr18	48476374	48476375	chunk0088_234_1	48.8819	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	48476293	48476482	-31896803	-	MIR	SINE	MIR	0	262	35	1
chr18	48649743	48649744	chunk0088_246_1	24.8125	AR_DHT_Control	chr18	48648985	48655135	-31718150	+	L1PA6	LINE	L1	5	6154	0	1
chr18	48709656	48709657	chunk0088_247_1	5.51262	AR_DHT_Control	chr18	48709645	48709677	-31663608	+	GA-rich	Low_complexity	Low_complexity	1	32	0	1
chr18	48981264	48981265	chunk0088_256_1	8.7059	AR_DHT_Control	chr18	48981243	48981627	-31391658	+	L1MB8	LINE	L1	5572	5917	-261	1
chr18	48997503	48997504	chunk0088_258_1	89.59469	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	48997420	48997507	-31375778	+	MIR3	SINE	MIR	94	184	-24	1
chr18	49100713	49100714	chunk0088_262_1	40.6698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	49100693	49100858	-31272427	-	MIRb	SINE	MIR	-32	236	53	1
chr18	49160577	49160578	chunk0088_263_1	54.8573	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	49160576	49160593	-31212692	+	(A)n	Simple_repeat	Simple_repeat	1	17	0	1
chr18	49169393	49169394	chunk0088_266_1	37.61372	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	49169083	49169467	-31203818	-	L2c	LINE	L2	-14	3373	2961	1
chr18	49192637	49192638	chunk0088_270_1	32.9272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	49192333	49192845	-31180440	-	L1M2	LINE	L1	-1054	5089	4579	1
chr18	49259955	49259956	chunk0088_271_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	49259928	49260125	-31113160	+	HAL1ME	LINE	L1	949	1143	-1322	1
chr18	49273658	49273659	chunk0088_272_1	10.0617	AR_DHT_Control	chr18	49273465	49273803	-31099482	+	Tigger3a	DNA	TcMar-Tigger	6	348	0	1
chr18	49285715	49285716	chunk0088_273_1	11.2868	AR_DHT_Control	chr18	49285414	49285742	-31087543	+	Tigger3a	DNA	TcMar-Tigger	3	347	-1	1
chr18	49342915	49342916	chunk0088_275_1	14.9872	AR_DHT_Control	chr18	49342630	49342966	-31030319	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	1
chr18	49369248	49369249	chunk0088_276_1	5.99997	AR_DHT_Control	chr18	49369246	49369711	-31003574	-	HAL1	LINE	L1	-1967	540	16	1
chr18	49534695	49534696	chunk0088_284_1	22.67489	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	49534041	49536213	-30837072	+	MER4-int	LTR	ERV1	4411	8269	-1	1
chr18	49639254	49639255	chunk0088_286_1	6.43609	AR_DHT_Control	chr18	49639233	49639455	-30733830	+	MIRb	SINE	MIR	5	253	-15	1
chr18	49681604	49681605	chunk0088_288_1	4.84918	AR_DHT_Control	chr18	49681553	49681633	-30691652	-	MIRc	SINE	MIR	-17	251	171	1
chr18	49731675	49731676	chunk0088_293_1	11.90276	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	49731428	49731772	-30641513	+	MLT1K	LTR	ERVL-MaLR	176	559	-36	1
chr18	50216458	50216459	chunk0088_303_1	8.90544	AR_DHT_Control	chr18	50216371	50216577	-30156708	-	MamRep1879	DNA	hAT-Tip100?	0	216	8	1
chr18	50586613	50586614	chunk0088_309_1	9.93187	AR_DHT_Control	chr18	50586443	50586668	-29786617	+	MIR	SINE	MIR	10	238	-24	1
chr18	50773969	50773970	chunk0088_314_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	50772514	50775074	-29598211	+	L1MA4A	LINE	L1	5139	7721	-1	1
chr18	50970184	50970185	chunk0088_323_1	7.12934	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	50970093	50970254	-29403031	-	AluJr	SINE	Alu	-144	168	1	1
chr18	51020633	51020634	chunk0088_327_1	36.355	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	51020625	51020748	-29352537	+	MIR	SINE	MIR	94	230	-32	1
chr18	51096167	51096168	chunk0088_334_1	12.7341	AR_DHT_Control	chr18	51096040	51096822	-29276463	-	L1PA7	LINE	L1	-2967	3179	2395	1
chr18	51137900	51137901	chunk0088_335_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	51137817	51138047	-29235238	-	MIR	SINE	MIR	-2	260	13	1
chr18	51512532	51512533	chunk0088_342_1	14.2975	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	51512381	51512859	-28860426	-	L1P3	LINE	L1	-2600	3546	3071	1
chr18	51537969	51537970	chunk0088_344_1	9.44294	AR_DHT_Control	chr18	51537887	51538074	-28835211	-	LTR106_Mam	LTR	LTR	-44	664	475	1
chr18	51611740	51611741	chunk0088_346_1	25.7756	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	51611476	51611791	-28761494	+	L2a	LINE	L2	2504	2857	-562	1
chr18	51973094	51973095	chunk0088_348_1	12.1886	AR_DHT_Control	chr18	51972927	51973612	-28399673	+	L1MCb	LINE	L1	585	1394	-5357	1
chr18	52139693	52139694	chunk0088_349_1	34.09771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	52139269	52139779	-28233506	-	LTR40a	LTR	ERVL	0	519	1	1
chr18	52196534	52196535	chunk0088_351_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	52196447	52196656	-28176629	+	LTR40a	LTR	ERVL	1	210	-309	1
chr18	52288811	52288812	chunk0088_353_1	21.925	AR_DHT_Control	chr18	52288771	52288939	-28084346	+	MER58A	DNA	hAT-Charlie	47	224	0	1
chr18	52439797	52439798	chunk0088_354_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	52439788	52439905	-27933380	+	L1MA2	LINE	L1	6188	6304	0	1
chr18	52748505	52748506	chunk0088_358_1	4.83532	AR_DHT_Control	chr18	52747896	52748914	-27624371	-	LTR2752	LTR	ERV1	0	1755	192	1
chr18	53882572	53882573	chunk0088_369_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	53878953	53883224	-26490061	-	L1PA10	LINE	L1	-2075	4386	1	1
chr18	54105636	54105637	chunk0088_372_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	54105571	54105653	-26267632	-	MIRc	SINE	MIR	-182	86	11	1
chr18	54260988	54260989	chunk0088_382_1	7.80332	AR_DHT_Control	chr18	54260980	54261346	-26111939	+	MLT2B4	LTR	ERVL	1	371	-185	1
chr18	54303664	54303665	chunk0088_386_1	10.1791	AR_DHT_Control	chr18	54303387	54303680	-26069605	-	L1MEd	LINE	L1	-6235	851	542	1
chr18	54307371	54307372	chunk0088_387_1	17.7927	AR_DHT_Control	chr18	54306057	54310225	-26063060	-	L1PA6	LINE	L1	-1977	4169	1	1
chr18	54316270	54316271	chunk0088_388_1	133.7069	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	54316209	54316292	-26056993	-	L1PA16	LINE	L1	-3959	2187	2110	1
chr18	54351464	54351465	chunk0088_392_1	17.08068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	54349511	54352393	-26020892	-	L1PB2	LINE	L1	-5	6146	3200	1
chr18	54470879	54470880	chunk0088_400_1	50.9466	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	54470630	54470892	-25902393	-	L1MA5A	LINE	L1	-6	6291	6018	1
chr18	54772283	54772284	chunk0088_411_1	7.33982	AR_DHT_Control	chr18	54772227	54772348	-25600937	+	UCON65	Unknown	Unknown	335	454	-4	1
chr18	54826141	54826142	chunk0088_416_1	23.3603	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	54825688	54826168	-25547117	-	HAL1	LINE	L1	-2031	476	9	1
chr18	54957495	54957496	chunk0088_420_1	87.2555	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	54957417	54957560	-25415725	+	L2b	LINE	L2	3248	3375	0	1
chr18	55567885	55567886	chunk0088_428_1	21.8663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	55567724	55569372	-24803913	+	L1MEd	LINE	L1	2619	4305	-1841	1
chr18	55815697	55815698	chunk0088_436_1	22.69953	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	55815552	55816721	-24556564	+	MER57A-int	LTR	ERV1	1262	3352	-2004	1
chr18	55941494	55941495	chunk0088_440_1	56.63624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	55941157	55941498	-24431787	+	MLT1J	LTR	ERVL-MaLR	16	344	-104	1
chr18	56661633	56661634	chunk0088_444_1	47.674	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	56661278	56662135	-23711150	-	Charlie13a	DNA	hAT-Charlie	-510	1004	105	1
chr18	56676852	56676853	chunk0088_445_1	5.6425	AR_DHT_Control	chr18	56676697	56676876	-23696409	-	AluJb	SINE	Alu	0	312	134	1
chr18	56764372	56764373	chunk0088_449_1	8.64577	AR_DHT_Control	chr18	56763251	56764395	-23608890	-	L1MEc	LINE	L1	-2138	4181	2925	1
chr18	56795607	56795608	chunk0088_450_1	12.6499	AR_DHT_Control	chr18	56794963	56795652	-23577633	-	L1MC5	LINE	L1	-989	8315	7696	1
chr18	57132030	57132031	chunk0088_453_1	31.0608	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	57131994	57132051	-23241234	-	L2a	LINE	L2	-6	3420	3364	1
chr18	57382278	57382279	chunk0089_7_1	114.8556	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	57381957	57382409	-22990876	+	L1ME1	LINE	L1	5327	5771	-408	1
chr18	57451914	57451915	chunk0089_10_1	6.84874	AR_DHT_Control	chr18	57451831	57451915	-22921370	-	MLT1H2	LTR	ERVL-MaLR	-366	123	36	1
chr18	57581193	57581194	chunk0089_13_1	58.9941	AR_DHT_Control	chr18	57580670	57581305	-22791980	+	MER115	DNA	hAT-Tip100	1	693	0	1
chr18	57757245	57757246	chunk0089_23_1	5.69226	AR_DHT_Control	chr18	57756597	57758024	-22615261	-	L1MC4	LINE	L1	-443	7599	6186	1
chr18	57767049	57767050	chunk0089_24_1	16.11684	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	57766734	57767084	-22606201	-	L2c	LINE	L2	-102	3285	2929	1
chr18	58077457	58077458	chunk0089_46_1	99.1392	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	58077439	58077541	-22295744	-	L1ME2z	LINE	L1	-150	6294	6174	1
chr18	58088777	58088778	chunk0089_47_1	41.2256	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	58088743	58088851	-22284434	+	L4_C_Mam	LINE	RTE-X	4893	5008	-130	1
chr18	58152592	58152593	chunk0089_59_1	54.82763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	58152589	58152768	-22220517	-	MER5A	DNA	hAT-Charlie	-6	183	2	1
chr18	58183369	58183370	chunk0089_64_1	30.70988	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	58183132	58183371	-22189914	+	LTR32	LTR	ERVL	218	457	0	1
chr18	58201737	58201738	chunk0089_68_1	39.37276	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	58201484	58202022	-22171263	-	L1MC5a	LINE	L1	-1987	790	411	1
chr18	58213127	58213128	chunk0089_72_1	5.73759	AR_DHT_Control	chr18	58212857	58213475	-22159810	+	L1ME3G	LINE	L1	1	549	-375	1
chr18	58300169	58300170	chunk0089_85_1	67.7092	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	58300067	58300280	-22073005	+	MIR	SINE	MIR	50	262	0	1
chr18	58360461	58360462	chunk0089_94_1	32.57717	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	58359878	58360742	-22012543	-	L1MEd	LINE	L1	-5477	1626	718	1
chr18	58407498	58407499	chunk0089_100_1	10.3925	AR_DHT_Control	chr18	58407260	58407646	-21965639	+	Tigger3a	DNA	TcMar-Tigger	1	345	-3	1
chr18	58417963	58417964	chunk0089_102_1	51.423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	58417912	58418015	-21955270	-	LTR78B	LTR	ERV1	-1191	105	2	1
chr18	58591266	58591267	chunk0089_118_1	5.6503	AR_DHT_Control	chr18	58591264	58591340	-21781945	-	MIRc	SINE	MIR	-121	147	71	1
chr18	58647617	58647618	chunk0089_120_1	22.79004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	58647568	58648140	-21725145	-	L1ME4b	LINE	L1	-782	110	13	1
chr18	58654256	58654257	chunk0089_121_1	6.48643	AR_DHT_Control	chr18	58653559	58655472	-21717813	-	L1M2	LINE	L1	-2687	4172	2103	1
chr18	58739883	58739884	chunk0089_126_1	28.52566	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	58739830	58739890	-21633395	+	MLT2D	LTR	ERVL	368	414	0	1
chr18	58753191	58753192	chunk0089_127_1	18.2941	AR_DHT_Control	chr18	58753188	58753506	-21619779	-	AluSz	SINE	Alu	0	312	1	1
chr18	58942881	58942882	chunk0089_140_1	39.56769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	58942558	58942892	-21430393	-	Charlie29a	DNA	hAT-Charlie	-280	439	91	1
chr18	58967967	58967968	chunk0089_144_1	24.4467	AR_DHT_Control	chr18	58967771	58967974	-21405311	+	MamSINE1	SINE	tRNA-RTE	76	290	0	1
chr18	59053439	59053440	chunk0089_146_1	46.9513	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	59053374	59053551	-21319734	-	L1ME4c	LINE	L1	-93	737	564	1
chr18	59065877	59065878	chunk0089_151_1	133.08856	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	59065576	59065959	-21307326	-	Charlie29a	DNA	hAT-Charlie	-79	640	226	1
chr18	59074339	59074340	chunk0089_154_1	14.78702	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	59074222	59074411	-21298874	-	L1ME3Cz	LINE	L1	-2	995	794	1
chr18	59086689	59086690	chunk0089_160_1	6.92493	AR_DHT_Control	chr18	59086471	59086700	-21286585	-	MIR	SINE	MIR	-21	241	6	1
chr18	59098275	59098276	chunk0089_164_1	24.72366	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	59097895	59098704	-21274581	+	L1MA2	LINE	L1	5489	6304	0	1
chr18	59145279	59145280	chunk0089_167_1	38.3704	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	59145201	59145378	-21227907	+	MER58A	DNA	hAT-Charlie	41	224	0	1
chr18	59549983	59549984	chunk0089_173_1	17.17487	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	59549957	59550168	-20823117	-	MamRTE1	LINE	RTE-BovB	-256	3556	3353	1
chr18	59957743	59957744	chunk0089_192_1	45.5546	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	59957563	59957912	-20415373	-	L1MB4	LINE	L1	-33	6147	5797	1
chr18	60007736	60007737	chunk0089_199_1	12.1906	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	60007617	60008039	-20365246	-	L1ME1	LINE	L1	-211	5968	5522	1
chr18	60025145	60025146	chunk0089_200_1	28.82378	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	60024977	60025195	-20348090	-	L2a	LINE	L2	-276	3150	2910	1
chr18	60670663	60670664	chunk0089_206_1	15.51896	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	60670596	60670963	-19702322	+	MER83C	LTR	ERV1	1	373	0	1
chr18	60674798	60674799	chunk0089_207_1	8.5059	AR_DHT_Control	chr18	60674611	60675740	-19697545	+	L1MC4	LINE	L1	6698	7881	-1	1
chr18	60675930	60675931	chunk0089_208_1	7.4311	AR_DHT_Control	chr18	60675831	60676049	-19697236	-	MER58A	DNA	hAT-Charlie	0	224	6	1
chr18	61045701	61045702	chunk0089_212_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	61045484	61046710	-19326575	+	L1PB2	LINE	L1	4880	6148	-3	1
chr18	61204295	61204296	chunk0089_216_1	25.8787	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	61204186	61205054	-19168231	-	HAL1	LINE	L1	-7	2500	1623	1
chr18	61350710	61350711	chunk0089_220_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	61350615	61351003	-19022282	-	MLT1J2	LTR	ERVL-MaLR	-14	434	1	1
chr18	61714556	61714557	chunk0089_229_1	39.23296	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	61707389	61715042	-18658243	+	PRIMA41-int	LTR	ERV1	3	7756	0	1
chr18	61831701	61831702	chunk0089_233_1	9.62049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	61831672	61831702	-18541583	+	(CAAA)n	Simple_repeat	Simple_repeat	1	30	0	1
chr18	61977063	61977064	chunk0089_239_1	16.58734	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	61976510	61978901	-18394384	-	L1MEg	LINE	L1	-1565	4581	2033	1
chr18	62023795	62023796	chunk0089_241_1	6.48643	AR_DHT_Control	chr18	62023484	62024032	-18349253	-	Tigger6a	DNA	TcMar-Tigger	-507	576	3	1
chr18	62166849	62166850	chunk0089_244_1	11.7522	AR_DHT_Control	chr18	62166412	62167078	-18206207	+	L1PA8	LINE	L1	5500	6170	-2	1
chr18	62169579	62169580	chunk0089_246_1	29.84161	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	62169556	62169623	-18203662	-	L1ME1	LINE	L1	-515	5664	5598	1
chr18	62483260	62483261	chunk0089_255_1	51.6236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	62483105	62483633	-17889652	+	L1PREC2	LINE	L1	5968	6365	-306	1
chr18	62537722	62537723	chunk0089_261_1	14.4295	AR_DHT_Control	chr18	62537470	62538063	-17835222	-	L1MB4	LINE	L1	-216	5964	5347	1
chr18	62672727	62672728	chunk0089_266_1	5.6425	AR_DHT_Control	chr18	62671779	62673190	-17700095	-	L1M4	LINE	L1	-5582	1935	501	1
chr18	62716169	62716170	chunk0089_267_1	6.06371	AR_DHT_Control	chr18	62716163	62716181	-17657104	+	(CCTCGG)n	Simple_repeat	Simple_repeat	1	112	0	1
chr18	62846448	62846449	chunk0089_276_1	13.1127	AR_DHT_Control	chr18	62846369	62846494	-17526791	-	L2c	LINE	L2	-225	3162	3038	1
chr18	62857790	62857791	chunk0089_277_1	11.3519	AR_DHT_Control	chr18	62857637	62857900	-17515385	+	L2b	LINE	L2	3096	3373	-2	1
chr18	62933501	62933502	chunk0089_281_1	90.0965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	62931899	62934714	-17438571	+	L1PA17	LINE	L1	3270	6150	-16	1
chr18	62967341	62967342	chunk0089_283_1	12.47574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	62966767	62967547	-17405738	-	L1ME1	LINE	L1	-73	6106	5332	1
chr18	63008979	63008980	chunk0089_284_1	9.96971	AR_DHT_Control	chr18	63008819	63011771	-17361514	-	L1MC2	LINE	L1	-9	6335	3321	1
chr18	63230581	63230582	chunk0089_294_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	63229930	63232913	-17140372	+	L1ME3Cz	LINE	L1	176	5562	-757	1
chr18	63451947	63451948	chunk0089_298_1	13.9693	AR_DHT_Control	chr18	63451766	63451958	-16921327	-	LTR71B	LTR	ERV1	0	610	419	1
chr18	63460629	63460630	chunk0089_299_1	59.4118	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	63460409	63461193	-16912092	-	L1ME1	LINE	L1	0	6179	5390	1
chr18	63697535	63697536	chunk0089_304_1	9.08114	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	63697271	63697686	-16675599	-	L1ME2	LINE	L1	-531	5633	5170	1
chr18	63705569	63705570	chunk0089_305_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	63705340	63705620	-16667665	+	L1ME5	LINE	L1	5896	6193	-1	1
chr18	63809469	63809470	chunk0089_307_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	63809249	63809905	-16563380	-	L2c	LINE	L2	-153	3234	2533	1
chr18	63848567	63848568	chunk0089_309_1	60.18752	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	63848505	63848893	-16524392	-	L1ME1	LINE	L1	-2	6177	5768	1
chr18	63861963	63861964	chunk0089_311_1	20.23369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	63861907	63862088	-16511197	+	L1M5	LINE	L1	5558	5762	-362	1
chr18	64153601	64153602	chunk0089_314_1	8.09329	AR_DHT_Control	chr18	64152988	64154085	-16219200	+	L2a	LINE	L2	2255	3422	-4	1
chr18	64803658	64803659	chunk0089_317_1	5.08049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	64803472	64803764	-15569521	-	L1PA15	LINE	L1	-5	6160	5868	1
chr18	64804377	64804378	chunk0089_318_1	13.41996	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	64803764	64804659	-15568626	+	L1MD2	LINE	L1	5248	6140	-219	1
chr18	65525994	65525995	chunk0089_333_1	59.25	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	65525372	65526043	-14847242	+	L1MA3	LINE	L1	5617	6305	0	1
chr18	65906559	65906560	chunk0089_344_1	121.1213	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	65906493	65906648	-14466637	-	MER67C	LTR	ERV1	0	514	358	1
chr18	66004412	66004413	chunk0089_349_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	66003344	66004906	-14368379	+	L1M1	LINE	L1	16	1630	-5935	1
chr18	66648005	66648006	chunk0089_353_1	5.6503	AR_DHT_Control	chr18	66647584	66648098	-13725187	-	MLT1G1	LTR	ERVL-MaLR	-2	577	13	1
chr18	66687759	66687760	chunk0089_354_1	5.12066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	66687401	66688380	-13684905	+	MER41-int	LTR	ERV1	4068	4827	-390	1
chr18	66724799	66724800	chunk0089_355_1	5.6425	AR_DHT_Control	chr18	66724752	66724861	-13648424	+	MamRTE1	LINE	RTE-BovB	3471	3579	-233	1
chr18	66832171	66832172	chunk0089_357_1	13.79517	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	66832013	66833353	-13539932	+	L1MA4	LINE	L1	4896	6298	-2	1
chr18	66980838	66980839	chunk0089_363_1	21.2108	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	66980014	66980915	-13392370	-	L1MC3	LINE	L1	-8	8195	7287	1
chr18	66997821	66997822	chunk0089_364_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	66996688	66998112	-13375173	+	L1PA15	LINE	L1	4249	5730	-435	1
chr18	67121179	67121180	chunk0089_369_1	67.0265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67121085	67121330	-13251955	+	L1M4	LINE	L1	1	250	-7267	1
chr18	67255955	67255956	chunk0089_373_1	13.15758	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67255770	67255959	-13117326	-	L1M5	LINE	L1	-279	5845	5648	1
chr18	67344656	67344657	chunk0089_374_1	7.87199	AR_DHT_Control	chr18	67344599	67344701	-13028584	+	(AT)n	Simple_repeat	Simple_repeat	1	103	0	1
chr18	67422616	67422617	chunk0089_377_1	5.6425	AR_DHT_Control	chr18	67422451	67423290	-12949995	-	L1MC1	LINE	L1	-20	6313	5457	1
chr18	67466362	67466363	chunk0089_379_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67465882	67466575	-12906710	+	L1MC	LINE	L1	5004	5739	-503	1
chr18	67497531	67497532	chunk0089_380_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67497306	67498742	-12874543	+	L1MEd	LINE	L1	3387	4895	-1251	1
chr18	67651725	67651726	chunk0089_386_1	25.783	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	67651665	67651850	-12721435	+	MER5A	DNA	hAT-Charlie	2	188	-1	1
chr18	67754849	67754850	chunk0089_388_1	30.6123	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	67754841	67755144	-12618141	-	L1MA4	LINE	L1	-5	6295	5986	1
chr18	67876207	67876208	chunk0089_390_1	24.4415	AR_DHT_Control	chr18	67875380	67876417	-12496868	+	L1ME1	LINE	L1	5017	6081	-98	1
chr18	68053351	68053352	chunk0089_393_1	20.49638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	68053116	68053468	-12319817	+	L1ME3	LINE	L1	5714	6105	-57	1
chr18	68107852	68107853	chunk0089_394_1	11.9378	AR_DHT_Control	chr18	68107221	68110301	-12262984	-	L1MC3	LINE	L1	-17	7768	4724	1
chr18	68109362	68109363	chunk0089_395_1	7.15646	AR_DHT_Control	chr18	68107221	68110301	-12262984	-	L1MC3	LINE	L1	-17	7768	4724	1
chr18	68151151	68151152	chunk0089_398_1	120.958	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	68150744	68151559	-12221726	+	L1MA2	LINE	L1	6899	7723	0	1
chr18	68180787	68180788	chunk0089_401_1	66.7066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	68180605	68180913	-12192372	-	L1MB5	LINE	L1	-32	6142	5828	1
chr18	68199749	68199750	chunk0089_403_1	64.2614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	68199606	68199813	-12173472	-	MER58A	DNA	hAT-Charlie	-15	209	1	1
chr18	68606832	68606833	chunk0089_410_1	6.28518	AR_DHT_Control	chr18	68606718	68607138	-11766147	-	MSTB	LTR	ERVL-MaLR	0	426	1	1
chr18	68712003	68712004	chunk0089_413_1	5.81334	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	68711855	68712630	-11660655	-	MER76-int	LTR	ERVL	-1863	4326	3540	1
chr18	68861232	68861233	chunk0089_416_1	12.1886	AR_DHT_Control	chr18	68861144	68861242	-11512043	-	MER67C	LTR	ERV1	-411	103	5	1
chr18	69322855	69322856	chunk0089_418_1	85.9242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	69322745	69323100	-11050185	+	L1ME2	LINE	L1	5719	6082	-82	1
chr18	69752910	69752911	chunk0089_422_1	7.42871	AR_DHT_Control	chr18	69752700	69753048	-10620237	-	LTR40a	LTR	ERVL	-64	455	68	1
chr18	69780605	69780606	chunk0089_423_1	17.22908	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	69780309	69780615	-10592670	+	AluSz	SINE	Alu	1	306	-6	1
chr18	69925140	69925141	chunk0089_427_1	13.5125	AR_DHT_Control	chr18	69924403	69925443	-10447842	+	CR1_Mam	LINE	CR1	203	1267	-937	1
chr18	69949755	69949756	chunk0089_429_1	11.37385	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	69949579	69950255	-10423030	+	(CA)n	Simple_repeat	Simple_repeat	1	677	0	1
chr18	70021268	70021269	chunk0089_432_1	25.4631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	70021195	70021354	-10351931	-	MIRc	SINE	MIR	-79	189	26	1
chr18	70080500	70080501	chunk0089_433_1	8.04094	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	70080197	70080705	-10292580	+	L1MC4	LINE	L1	6688	7228	-814	1
chr18	70163541	70163542	chunk0089_436_1	49.7387	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	70163394	70163623	-10209662	+	L1MB3	LINE	L1	5490	5784	-399	1
chr18	70304856	70304857	chunk0089_450_1	112.6521	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	70304407	70304924	-10068361	-	L1M4	LINE	L1	-617	5557	5037	1
chr18	70381800	70381801	chunk0090_78_1	39.65977	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	70381654	70381915	-9991370	+	L2c	LINE	L2	3076	3343	-44	1
chr18	70428744	70428745	chunk0090_80_1	50.2966	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	70428670	70428783	-9944502	-	MIR	SINE	MIR	-15	247	128	1
chr18	70467470	70467471	chunk0090_82_1	7.92341	AR_DHT_Control	chr18	70467406	70467496	-9905789	-	MIRc	SINE	MIR	-136	132	45	1
chr18	70669288	70669289	chunk0090_91_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	70668957	70670281	-9703004	+	MER52D	LTR	ERV1	4	1914	-209	1
chr18	70730521	70730522	chunk0090_93_1	7.27655	AR_DHT_Control	chr18	70730177	70730531	-9642754	+	THE1B	LTR	ERVL-MaLR	1	364	0	1
chr18	70775711	70775712	chunk0090_94_1	37.68471	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	70775638	70775737	-9597548	+	MIR3	SINE	MIR	58	156	-52	1
chr18	70872255	70872256	chunk0090_100_1	6.13992	AR_DHT_Control	chr18	70872211	70873014	-9500271	-	L1MC4	LINE	L1	-279	7763	6926	1
chr18	70942612	70942613	chunk0090_102_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	70942206	70947514	-9425771	+	L1M1	LINE	L1	16	5163	-2399	1
chr18	70946407	70946408	chunk0090_103_1	22.79437	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	70942206	70947514	-9425771	+	L1M1	LINE	L1	16	5163	-2399	1
chr18	71045894	71045895	chunk0090_105_1	6.3126	AR_DHT_Control	chr18	71045735	71045943	-9327342	-	MLT1I	LTR	ERVL-MaLR	-192	219	6	1
chr18	71052360	71052361	chunk0090_106_1	9.08241	AR_DHT_Control	chr18	71052232	71052438	-9320847	+	L2a	LINE	L2	2910	3129	-297	1
chr18	71208978	71208979	chunk0090_111_1	28.82073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	71208971	71209034	-9164251	+	(ATTTTA)n	Simple_repeat	Simple_repeat	1	64	0	1
chr18	71372147	71372148	chunk0090_115_1	6.71885	AR_DHT_Control	chr18	71371970	71372323	-9000962	+	L2a	LINE	L2	2813	3205	-221	1
chr18	71640910	71640911	chunk0090_118_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	71640419	71641259	-8732026	-	LTR28B	LTR	ERV1	0	974	1	1
chr18	71682924	71682925	chunk0090_120_1	85.76367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	71682883	71684044	-8689241	+	L1MA4	LINE	L1	1240	2432	-4133	1
chr18	71775706	71775707	chunk0090_122_1	12.6258	AR_DHT_Control	chr18	71775535	71775730	-8597555	+	MIR	SINE	MIR	63	256	-6	1
chr18	71810373	71810374	chunk0090_126_1	13.352	AR_DHT_Control	chr18	71809446	71810402	-8562883	+	L1MB7	LINE	L1	1	1016	-6501	1
chr18	71862242	71862243	chunk0090_130_1	43.0064	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	71862003	71862359	-8510926	-	L1ME2z	LINE	L1	-281	6163	5789	1
chr18	71879023	71879024	chunk0090_132_1	29.2957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	71878652	71879191	-8494094	+	L1M4b	LINE	L1	1913	2519	-4348	1
chr18	71880091	71880092	chunk0090_134_1	35.314	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	71880085	71880149	-8493136	-	L2b	LINE	L2	-22	3353	3289	1
chr18	71979828	71979829	chunk0090_135_1	6.17841	AR_DHT_Control	chr18	71979607	71979962	-8393323	-	MER57E1	LTR	ERV1	0	372	7	1
chr18	72188671	72188672	chunk0090_140_1	165.871	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	72188498	72190123	-8183162	-	L1MC1	LINE	L1	-17	6316	4677	1
chr18	72240225	72240226	chunk0090_144_1	32.21571	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	72239875	72240323	-8132962	-	L1MC	LINE	L1	-1072	5074	4626	1
chr18	72262001	72262002	chunk0090_147_1	21.33464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	72261647	72262059	-8111226	-	MLT2D	LTR	ERVL	0	414	1	1
chr18	72393407	72393408	chunk0090_154_1	23.72996	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	72392786	72393875	-7979410	+	L1MC3	LINE	L1	7164	7785	0	1
chr18	72409599	72409600	chunk0090_157_1	21.39717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	72409488	72409874	-7963411	+	AluJb	SINE	Alu	2	302	-10	1
chr18	72519109	72519110	chunk0090_163_1	13.8894	AR_DHT_Control	chr18	72518911	72519336	-7853949	+	L1ME1	LINE	L1	5842	6316	-36	1
chr18	72524838	72524839	chunk0090_164_1	19.33714	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	72522811	72526509	-7846776	-	MER31-int	LTR	ERV1	-590	4628	867	1
chr18	72687962	72687963	chunk0090_170_1	16.85874	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	72686842	72688092	-7685193	+	LTR37-int	LTR	ERV1	1512	2817	-1243	1
chr18	72704203	72704204	chunk0090_174_1	10.22733	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	72703908	72705600	-7667685	+	L1MDa	LINE	L1	15	1852	-4781	1
chr18	72814132	72814133	chunk0090_179_1	5.86499	AR_DHT_Control	chr18	72813308	72814213	-7559072	+	L1MEd	LINE	L1	615	1734	-4508	1
chr18	72899558	72899559	chunk0090_182_1	6.58135	AR_DHT_Control	chr18	72899497	72899819	-7473466	+	LTR16A	LTR	ERVL	70	430	-21	1
chr18	72903119	72903120	chunk0090_183_1	16.53813	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	72903086	72903558	-7469727	-	L1PB4	LINE	L1	0	6156	5689	1
chr18	73034190	73034191	chunk0090_189_1	8.27376	AR_DHT_Control	chr18	73031055	73034362	-7338923	+	L1MCa	LINE	L1	2591	5923	-596	1
chr18	73043152	73043153	chunk0090_191_1	36.6488	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	73043061	73043509	-7329776	-	L2a	LINE	L2	0	3426	2911	1
chr18	73057867	73057868	chunk0090_194_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	73057737	73057946	-7315339	+	Kanga2_a	DNA	TcMar-Tc2	150	396	-492	1
chr18	73101881	73101882	chunk0090_195_1	9.70251	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	73101739	73101982	-7271303	+	MIR	SINE	MIR	14	261	-1	1
chr18	73189917	73189918	chunk0090_201_1	179.4779	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	73189877	73190170	-7183115	+	MER110A	LTR	ERV1	46	343	-125	1
chr18	73245882	73245883	chunk0090_205_1	14.45236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	73245659	73245895	-7127390	+	MLT1K	LTR	ERVL-MaLR	203	437	-158	1
chr18	73319065	73319066	chunk0090_206_1	15.55031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	73318699	73319460	-7053825	-	L4_A_Mam	LINE	RTE-X	-2958	2032	1285	1
chr18	73363297	73363298	chunk0090_210_1	19.1958	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	73361503	73364317	-7008968	-	L1MB5	LINE	L1	-3735	2909	3	1
chr18	73509451	73509452	chunk0090_218_1	15.61008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	73509257	73510596	-6862689	+	L1MCa	LINE	L1	672	2137	-4614	1
chr18	73661697	73661698	chunk0090_227_1	9.45492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	73661578	73661800	-6711485	-	L1ME3Cz	LINE	L1	-518	5606	5407	1
chr18	73692375	73692376	chunk0090_228_1	157.1471	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	73692209	73692383	-6680902	+	MER41C	LTR	ERV1	150	311	-210	1
chr18	73707194	73707195	chunk0090_229_1	10.698	AR_DHT_Control	chr18	73706770	73707696	-6665589	+	L1MC1	LINE	L1	5239	6161	-172	1
chr18	73756520	73756521	chunk0090_236_1	234.0381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	73756426	73756791	-6616494	-	L2a	LINE	L2	-1	3425	3038	1
chr18	73881621	73881622	chunk0090_245_1	34.69623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	73881189	73881916	-6491369	+	MER72B	LTR	ERV1	17	765	-3	1
chr18	74282752	74282753	chunk0090_258_1	324.5127	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	74282597	74282919	-6090366	-	L2b	LINE	L2	-299	3127	2797	1
chr18	74465895	74465896	chunk0090_263_1	50.3411	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	74465536	74466146	-5907139	-	L1MC1	LINE	L1	-1728	6057	5395	1
chr18	74694582	74694583	chunk0090_277_1	35.64448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	74694012	74694793	-5678492	-	L1MEf	LINE	L1	-5505	1438	627	1
chr18	74831285	74831286	chunk0090_278_1	61.15199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	74831284	74831712	-5541573	-	L1MB3	LINE	L1	-47	6136	5704	1
chr18	74930968	74930969	chunk0090_284_1	8.15319	AR_DHT_Control	chr18	74929876	74931053	-5442232	-	L1MC4a	LINE	L1	-6	7876	6613	1
chr18	75172746	75172747	chunk0090_298_1	7.38582	AR_DHT_Control	chr18	75172670	75172787	-5200498	+	L2b	LINE	L2	3247	3373	-2	1
chr18	75398413	75398414	chunk0090_310_1	58.51	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	75397742	75398816	-4974469	-	L1MC4	LINE	L1	-365	7677	6606	1
chr18	75398987	75398988	chunk0090_311_1	31.291	AR_DHT_Control	chr18	75398881	75398997	-4974288	-	L1MC4	LINE	L1	-1437	6605	6489	1
chr18	75673475	75673476	chunk0090_317_1	7.4311	AR_DHT_Control	chr18	75673164	75674344	-4698941	-	L1ME2	LINE	L1	-335	6689	5491	1
chr18	75683544	75683545	chunk0090_320_1	8.06501	AR_DHT_Control	chr18	75683527	75683592	-4689693	+	L3	LINE	CR1	3714	3780	-319	1
chr18	75749967	75749968	chunk0090_321_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	75749305	75750024	-4623261	-	L1M4a1	LINE	L1	-488	2091	1410	1
chr18	75754227	75754228	chunk0090_322_1	6.00025	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	75753377	75754427	-4618858	-	MER52A	LTR	ERV1	-477	1278	3	1
chr18	76112437	76112438	chunk0090_330_1	4.84918	AR_DHT_Control	chr18	76112279	76112685	-4260600	+	MLT2C1	LTR	ERVL	1	355	-42	1
chr18	76339360	76339361	chunk0090_334_1	92.5013	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	76339287	76339520	-4033765	-	MIR	SINE	MIR	0	262	20	1
chr18	76428503	76428504	chunk0090_345_1	11.0952	AR_DHT_Control	chr18	76428417	76428531	-3944754	+	L1ME3G	LINE	L1	398	509	-415	1
chr18	76953781	76953782	chunk0090_361_1	57.3392	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	76953764	76953819	-3419466	-	L2b	LINE	L2	-5	3370	3308	1
chr18	77073673	77073674	chunk0090_365_1	30.31288	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	77073300	77073763	-3299522	-	LTR40a	LTR	ERVL	0	519	1	1
chr18	77084599	77084600	chunk0090_367_1	16.77336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	77084472	77084728	-3288557	+	MER65A	LTR	ERV1	182	445	0	1
chr18	77089080	77089081	chunk0090_368_1	9.14156	AR_DHT_Control	chr18	77088953	77089345	-3283940	+	LTR53	LTR	ERVL	104	491	-28	1
chr18	77128246	77128247	chunk0090_370_1	157.3675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	77125932	77128521	-3244764	+	L1MD2	LINE	L1	3499	6148	-211	1
chr18	77189819	77189820	chunk0090_373_1	56.3785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	77189743	77190106	-3183179	+	MLT2C1	LTR	ERVL	1	397	0	1
chr18	77191207	77191208	chunk0090_376_1	29.8674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	77190975	77191416	-3181869	-	L1ME3G	LINE	L1	-2074	5808	5521	1
chr18	77376316	77376317	chunk0090_385_1	22.80364	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	77376255	77376334	-2996951	+	L2a	LINE	L2	3324	3402	-24	1
chr18	77391883	77391884	chunk0090_387_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	77391554	77392115	-2981170	-	L1M4	LINE	L1	-5126	2391	1796	1
chr18	77485897	77485898	chunk0090_390_1	5.23393	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	77485359	77485918	-2887367	+	L2	LINE	L2	1326	1877	-1542	1
chr18	77526981	77526982	chunk0090_392_1	12.23303	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	77526582	77527455	-2845830	+	(TGTGCA)n	Simple_repeat	Simple_repeat	1	909	0	1
chr18	77866102	77866103	chunk0090_396_1	5.20246	AR_DHT_Control	chr18	77865657	77866156	-2507129	-	L1MD2	LINE	L1	-5618	922	382	1
chr18	78010313	78010314	chunk0090_397_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	78010065	78010679	-2362606	+	(GTG)n	Simple_repeat	Simple_repeat	1	618	0	1
chr18	78125935	78125936	chunk0090_398_1	5.10226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	78125913	78125972	-2247313	+	(TGTGCATG)n	Simple_repeat	Simple_repeat	1	62	0	1
chr18	78780973	78780974	chunk0090_404_1	6.48643	AR_DHT_Control	chr18	78780649	78781116	-1592169	-	MER119	DNA	hAT-Charlie	-34	549	80	1
chr18	78809961	78809962	chunk0090_407_1	7.12698	SRA057177_Lncap_AR_DHT_10nm_4hr	chr18	78809729	78810291	-1562994	+	(CA)n	Simple_repeat	Simple_repeat	1	579	0	1
chr18	78926094	78926095	chunk0090_410_1	12.9987	AR_DHT_Control	chr18	78925778	78926329	-1446956	+	L1MB7	LINE	L1	5562	6093	-81	1
chr18	79011626	79011627	chunk0090_415_1	194.5585	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	79011425	79012563	-1360722	+	Tigger3b	DNA	TcMar-Tigger	2	1230	-1	1
chr18	79062951	79062952	chunk0090_418_1	22.28762	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr18	79062717	79063220	-1310065	-	MER74A	LTR	ERVL	0	558	2	1
chr18	79180707	79180708	chunk0090_422_1	35.7412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr18	79180417	79180785	-1192500	-	L1MEf	LINE	L1	-4340	2075	1710	1
chr18	79200054	79200055	chunk0090_425_1	78.9873	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	79199784	79200299	-1172986	-	Tigger3b	DNA	TcMar-Tigger	-696	535	1	1
chr18	79824209	79824210	chunk0090_447_1	15.61981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr18	79823990	79824297	-548988	-	AluJb	SINE	Alu	0	312	1	1
chr19	571275	571276	chunk0090_13_1	4.96796	AR_DHT_Control	chr19	571082	571344	-58046272	+	LTR10B	LTR	ERV1	16	301	-204	1
chr19	707415	707416	chunk0090_16_1	45.33555	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	707378	707451	-57910165	+	MER58A	DNA	hAT-Charlie	1	73	-151	1
chr19	941089	941090	chunk0090_23_1	14.18227	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	941016	941091	-57676525	+	(CGCCGC)n	Simple_repeat	Simple_repeat	1	77	0	1
chr19	1407309	1407310	chunk0090_39_1	5.16131	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	1407282	1407349	-57210267	+	(CGCA)n	Simple_repeat	Simple_repeat	1	72	0	1
chr19	1507766	1507767	chunk0090_42_1	7.30744	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	1507702	1507790	-57109826	+	MIRb	SINE	MIR	178	262	0	1
chr19	2007367	2007368	chunk0090_55_1	37.35877	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	2007290	2007451	-56610165	+	MER58A	DNA	hAT-Charlie	61	224	0	1
chr19	2065277	2065278	chunk0090_60_1	4.70357	AR_DHT_Control	chr19	2065268	2065617	-56551999	+	L1MB7	LINE	L1	5779	6172	-12	1
chr19	2163419	2163420	chunk0090_65_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	2163375	2163491	-56454125	-	AluSp	SINE	Alu	-197	116	1	1
chr19	2507248	2507249	chunk0090_74_1	9.93187	AR_DHT_Control	chr19	2507172	2507369	-56110247	+	MIRc	SINE	MIR	22	207	-61	1
chr19	2923770	2923771	chunk0091_12_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	2923532	2924007	-55693609	+	MER68	LTR	ERVL	8	563	0	1
chr19	2953321	2953322	chunk0091_15_1	15.16935	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	2953013	2953324	-55664292	+	LTR43B	LTR	ERV1	237	572	0	1
chr19	3176189	3176190	chunk0091_18_1	7.69414	AR_DHT_Control	chr19	3175887	3176369	-55441247	-	LTR3B_	LTR	ERVK	-10	489	1	1
chr19	3221445	3221446	chunk0091_19_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	3221420	3221541	-55396075	+	MIR	SINE	MIR	1	130	-132	1
chr19	3245053	3245054	chunk0091_20_1	16.14962	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	3244225	3245438	-55372178	+	(TG)n	Simple_repeat	Simple_repeat	1	1260	0	1
chr19	3305340	3305341	chunk0091_22_1	84.98912	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	3305310	3305367	-55312249	+	L2b	LINE	L2	3030	3086	-301	1
chr19	4053738	4053739	chunk0091_41_1	13.93519	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	4053354	4053881	-54563735	+	(GTGT)n	Simple_repeat	Simple_repeat	1	531	0	1
chr19	4547711	4547712	chunk0091_48_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	4547575	4547919	-54069697	+	L2	LINE	L2	2724	3068	-351	1
chr19	4559395	4559396	chunk0091_49_1	8.90544	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	4559320	4559418	-54058198	-	L3	LINE	CR1	-106	3993	3897	1
chr19	4694338	4694339	chunk0091_50_1	12.5258	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	4694195	4694413	-53923203	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr19	4915375	4915376	chunk0091_63_1	6.48643	AR_DHT_Control	chr19	4915314	4915428	-53702188	-	MER58A	DNA	hAT-Charlie	-65	159	46	1
chr19	4933633	4933634	chunk0091_64_1	12.6489	AR_DHT_Control	chr19	4933537	4933700	-53683916	-	L1ME4b	LINE	L1	0	892	707	1
chr19	4991986	4991987	chunk0091_74_1	440.1983	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	4991941	4992046	-53625570	-	L1M4	LINE	L1	-2784	3362	3267	1
chr19	5345913	5345914	chunk0091_85_1	8.27376	AR_DHT_Control	chr19	5345651	5345953	-53271663	-	AluJr	SINE	Alu	-11	301	1	1
chr19	5578019	5578020	chunk0091_87_1	28.54711	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	5578007	5578070	-53039546	+	(CA)n	Simple_repeat	Simple_repeat	1	64	0	1
chr19	5605749	5605750	chunk0091_89_1	5.77445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	5605660	5605837	-53011779	+	L1MEc	LINE	L1	565	772	-6157	1
chr19	5630347	5630348	chunk0091_92_1	33.4313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	5630062	5630349	-52987267	-	L1ME3G	LINE	L1	-581	311	15	1
chr19	5883646	5883647	chunk0091_104_1	7.53305	AR_DHT_Control	chr19	5883369	5883741	-52733875	+	L1MC1	LINE	L1	5448	5808	-525	1
chr19	5888546	5888547	chunk0091_105_1	12.0334	AR_DHT_Control	chr19	5888347	5888615	-52729001	-	Tigger3a	DNA	TcMar-Tigger	-9	339	59	1
chr19	5968851	5968852	chunk0091_110_1	5.44741	AR_DHT_Control	chr19	5968779	5969140	-52648476	-	L2b	LINE	L2	-19	3356	2974	1
chr19	6056234	6056235	chunk0091_113_1	6.0927	AR_DHT_Control	chr19	6056221	6056371	-52561245	+	L1MC5a	LINE	L1	2622	2775	-2	1
chr19	6079310	6079311	chunk0091_114_1	7.91804	AR_DHT_Control	chr19	6079273	6079547	-52538069	+	L1ME1	LINE	L1	5744	6018	-161	1
chr19	6229646	6229647	chunk0091_115_1	7.24914	AR_DHT_Control	chr19	6229484	6229881	-52387735	+	(AC)n	Simple_repeat	Simple_repeat	1	426	0	1
chr19	6250261	6250262	chunk0091_120_1	15.70144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	6250048	6250421	-52367195	+	L1MB5	LINE	L1	5279	5646	-528	1
chr19	6411069	6411070	chunk0091_129_1	33.4955	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	6410986	6411156	-52206460	+	L1ME4b	LINE	L1	702	890	-2	1
chr19	6793665	6793666	chunk0091_136_1	185.724	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	6793358	6793790	-51823826	-	LTR47B3	LTR	ERVL	-12	452	1	1
chr19	6843897	6843898	chunk0091_137_1	40.8512	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	6843781	6843974	-51773642	+	MER104	DNA	TcMar-Tc2	5	174	-7	1
chr19	6903546	6903547	chunk0091_139_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	6903540	6903696	-51713920	-	MLT1J	LTR	ERVL-MaLR	-251	261	103	1
chr19	7153177	7153178	chunk0091_140_1	4.83532	AR_DHT_Control	chr19	7152972	7153502	-51464114	+	(AC)n	Simple_repeat	Simple_repeat	1	576	0	1
chr19	7179809	7179810	chunk0091_142_1	14.89535	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	7179808	7179984	-51437632	+	MLT1H2	LTR	ERVL-MaLR	2	182	-307	1
chr19	7266093	7266094	chunk0091_145_1	6.38514	AR_DHT_Control	chr19	7265942	7266378	-51351238	+	L1ME4a	LINE	L1	5254	5732	-392	1
chr19	7331304	7331305	chunk0091_146_1	6.46639	Merged_Lncap_AR_Veh	chr19	7331185	7331890	-51285726	+	(CAT)n	Simple_repeat	Simple_repeat	1	707	0	1
chr19	7415902	7415903	chunk0091_151_1	65.3194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	7415875	7416116	-51201500	+	Tigger17c	DNA	TcMar-Tigger	40	303	-885	1
chr19	7665242	7665243	chunk0091_167_1	47.7698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	7665194	7665362	-50952254	+	L1M3	LINE	L1	5567	5738	-428	1
chr19	7805091	7805092	chunk0091_169_1	18.16816	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	7804918	7805301	-50812315	-	L1M4	LINE	L1	-6552	965	573	1
chr19	7833515	7833516	chunk0091_170_1	4.48652	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	7833502	7833671	-50783945	-	L2b	LINE	L2	-181	3194	3002	1
chr19	8180287	8180288	chunk0091_177_1	30.6823	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	8180149	8180450	-50437166	+	L1ME4c	LINE	L1	312	641	-189	1
chr19	8201623	8201624	chunk0091_178_1	109.2236	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	8201550	8201627	-50415989	+	L1MA6	LINE	L1	6224	6300	0	1
chr19	8221455	8221456	chunk0091_180_1	33.762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	8221300	8221518	-50396098	+	MER113	DNA	hAT-Charlie	197	412	-109	1
chr19	8268901	8268902	chunk0091_184_1	5.6425	AR_DHT_Control	chr19	8268674	8268923	-50348693	+	L1M1	LINE	L1	118	381	-7184	1
chr19	8394894	8394895	chunk0091_190_1	15.479	AR_DHT_Control	chr19	8394648	8394951	-50222665	+	AluSz	SINE	Alu	1	308	-4	1
chr19	8435462	8435463	chunk0091_192_1	19.933	AR_DHT_Control	chr19	8435326	8435536	-50182080	-	L1MC1	LINE	L1	0	6333	6120	1
chr19	8448027	8448028	chunk0091_194_1	28.90316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	8447744	8448047	-50169569	+	AluY	SINE	Alu	1	303	-8	1
chr19	8638759	8638760	chunk0091_199_1	7.97539	AR_DHT_Control	chr19	8638497	8638832	-49978784	-	L2a	LINE	L2	0	3426	3025	1
chr19	9190813	9190814	chunk0091_202_1	25.2918	AR_DHT_Control	chr19	9190670	9191270	-49426346	+	SATR2	Satellite	Satellite	1	621	-3	1
chr19	9256318	9256319	chunk0091_203_1	13.4175	AR_DHT_Control	chr19	9255821	9256554	-49361062	+	SATR2	Satellite	Satellite	1	1140	-2151	1
chr19	9431389	9431390	chunk0091_207_1	6.77976	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	9431184	9431393	-49186223	+	LTR41B	LTR	ERVL	210	434	-324	1
chr19	9621760	9621761	chunk0091_208_1	5.62266	AR_DHT_Control	chr19	9621665	9622251	-48995365	-	LTR10C	LTR	ERV1	-62	529	1	1
chr19	9622749	9622750	chunk0091_209_1	33.13771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	9622393	9622966	-48994650	-	LTR10C	LTR	ERV1	0	591	3	1
chr19	9700906	9700907	chunk0091_211_1	27.7129	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	9700547	9701126	-48916490	-	LTR10C	LTR	ERV1	0	591	11	1
chr19	9784708	9784709	chunk0091_214_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	9784065	9785035	-48832581	-	LTR5B	LTR	ERVK	0	1002	1	1
chr19	9803628	9803629	chunk0091_215_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	9803433	9804104	-48813512	-	LTR8A	LTR	ERV1	0	727	32	1
chr19	9871840	9871841	chunk0091_217_1	12.36188	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	9871757	9871870	-48745746	+	L2c	LINE	L2	3288	3420	-6	1
chr19	10397281	10397282	chunk0091_228_1	19.08209	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	10397242	10397415	-48220201	-	AluJb	SINE	Alu	0	312	137	1
chr19	10509756	10509757	chunk0091_233_1	13.6548	AR_DHT_Control	chr19	10509741	10509908	-48107708	+	L1ME4b	LINE	L1	608	789	-103	1
chr19	10604128	10604129	chunk0091_235_1	5.41601	AR_DHT_Control	chr19	10604053	10604335	-48013281	-	L2a	LINE	L2	-5	3421	3042	1
chr19	10660500	10660501	chunk0091_238_1	7.97539	AR_DHT_Control	chr19	10660365	10660584	-47957032	-	MIRc	SINE	MIR	-15	253	11	1
chr19	10726428	10726429	chunk0091_243_1	78.47877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	10726393	10726474	-47891142	-	L2a	LINE	L2	-2	3424	3340	1
chr19	10741031	10741032	chunk0091_246_1	54.5473	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	10740676	10741147	-47876469	-	L1M4	LINE	L1	-3101	3045	2562	1
chr19	10749589	10749590	chunk0091_248_1	20.41694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	10749523	10749685	-47867931	-	MIRb	SINE	MIR	-91	171	13	1
chr19	10764859	10764860	chunk0091_249_1	76.7011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	10764642	10764860	-47852756	+	L2	LINE	L2	2839	3082	-337	1
chr19	11064988	11064989	chunk0091_259_1	10.3842	AR_DHT_Control	chr19	11064813	11065519	-47552097	-	L1M4a2	LINE	L1	-1803	853	4	1
chr19	11158062	11158063	chunk0091_263_1	16.4778	AR_DHT_Control	chr19	11157938	11158200	-47459416	+	L1MB3	LINE	L1	5428	5669	-514	1
chr19	11298067	11298068	chunk0091_265_1	5.00261	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	11297798	11298077	-47319539	-	AluJo	SINE	Alu	-19	293	5	1
chr19	11482928	11482929	chunk0091_269_1	17.1174	AR_DHT_Control	chr19	11482870	11483152	-47134464	+	L2a	LINE	L2	2967	3279	-147	1
chr19	11581266	11581267	chunk0091_272_1	9.68651	AR_DHT_Control	chr19	11581209	11581451	-47036165	+	L2a	LINE	L2	2911	3150	-276	1
chr19	11582276	11582277	chunk0091_274_1	155.14745	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	11582266	11582407	-47035209	+	MamRep1151	LTR?	LTR?	265	407	-302	1
chr19	11729679	11729680	chunk0091_282_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	11729494	11729822	-46887794	+	MER54A	LTR	ERVL	439	755	-146	1
chr19	11794153	11794154	chunk0091_283_1	7.69414	AR_DHT_Control	chr19	11793564	11794167	-46823449	-	L1M2	LINE	L1	-817	5326	4716	1
chr19	11854169	11854170	chunk0091_284_1	22.1433	AR_DHT_Control	chr19	11853713	11854477	-46763139	-	HERVK3-int	LTR	ERVK	-2	7200	6398	1
chr19	12325905	12325906	chunk0091_290_1	103.03987	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	12325487	12326361	-46291255	+	L1MB4	LINE	L1	536	1515	-5092	1
chr19	12396049	12396050	chunk0091_292_1	29.0158	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	12395441	12396369	-46221247	+	L1MB4	LINE	L1	396	1406	-5201	1
chr19	12453710	12453711	chunk0091_295_1	8.15319	AR_DHT_Control	chr19	12452382	12454543	-46163073	+	HERVK14-int	LTR	ERVK	1352	3531	-2565	1
chr19	12801872	12801873	chunk0091_305_1	38.01205	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr19	12801854	12801887	-45815729	+	(CGGAG)n	Simple_repeat	Simple_repeat	1	38	0	1
chr19	13050028	13050029	chunk0091_316_1	9.66113	AR_DHT_Control	chr19	13049891	13050078	-45567538	-	L1MB7	LINE	L1	-356	5828	5634	1
chr19	13989087	13989088	chunk0091_331_1	9.83641	AR_DHT_Control	chr19	13989087	13989306	-44628310	-	L2a	LINE	L2	-286	3140	2918	1
chr19	14018028	14018029	chunk0091_332_1	23.9107	AR_DHT_Control	chr19	14017942	14018123	-44599493	+	L1MB3	LINE	L1	5948	6140	-43	1
chr19	14103053	14103054	chunk0091_333_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	14103011	14103328	-44514288	-	L2b	LINE	L2	-5	3370	3075	1
chr19	14110686	14110687	chunk0091_334_1	10.3593	AR_DHT_Control	chr19	14110617	14110697	-44506919	-	L1ME3	LINE	L1	-24	6138	6059	1
chr19	14201826	14201827	chunk0091_337_1	14.0461	AR_DHT_Control	chr19	14201720	14202128	-44415488	-	L2a	LINE	L2	-16	3410	2957	1
chr19	14595926	14595927	chunk0091_346_1	8.26412	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	14595566	14596030	-44021586	+	(TGA)n	Simple_repeat	Simple_repeat	1	469	0	1
chr19	14992249	14992250	chunk0091_349_1	23.3675	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	14992123	14992307	-43625309	+	MER96B	DNA	hAT-Tip100	204	371	-46	1
chr19	15215597	15215598	chunk0091_352_1	90.9377	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	15215441	15215784	-43401832	-	L2b	LINE	L2	-158	3217	2791	1
chr19	15280184	15280185	chunk0091_354_1	9.15715	AR_DHT_Control	chr19	15280071	15280196	-43337420	-	MIR	SINE	MIR	-40	228	100	1
chr19	15381349	15381350	chunk0091_359_1	46.34577	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	15381028	15381391	-43236225	+	L1ME4c	LINE	L1	5436	5821	-303	1
chr19	15495372	15495373	chunk0091_365_1	346.8382	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	15495129	15495560	-43122056	-	L1MC5	LINE	L1	-928	8376	7944	1
chr19	15563879	15563880	chunk0091_367_1	5.82105	AR_DHT_Control	chr19	15563843	15563903	-43053713	+	(CT)n	Simple_repeat	Simple_repeat	1	64	0	1
chr19	15604724	15604725	chunk0091_371_1	12.47574	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	15604142	15605349	-43012267	-	LTR57-int	LTR	ERVL	-3755	1588	408	1
chr19	15610791	15610792	chunk0091_373_1	35.9599	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	15610644	15610880	-43006736	-	LTR44	LTR	ERV1	-284	235	1	1
chr19	15838084	15838085	chunk0091_378_1	39.7065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	15837932	15838455	-42779161	+	LTR10C	LTR	ERV1	66	591	0	1
chr19	15869452	15869453	chunk0091_381_1	19.91094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	15869220	15869514	-42748102	-	LTR16C	LTR	ERVL	-186	303	1	1
chr19	16060630	16060631	chunk0091_387_1	5.24411	AR_DHT_Control	chr19	16060328	16060781	-42556835	-	LTR40a	LTR	ERVL	0	519	3	1
chr19	16210351	16210352	chunk0091_393_1	30.4686	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	16209884	16210547	-42407069	-	L1ME1	LINE	L1	-72	6727	6052	1
chr19	16488969	16488970	chunk0091_405_1	21.11522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	16488844	16489174	-42128442	-	MER58B	DNA	hAT-Charlie	-1	340	7	1
chr19	16608525	16608526	chunk0091_406_1	35.98675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	16608169	16608541	-42009075	+	MER63D	DNA	hAT-Blackjack	6	390	-671	1
chr19	16734669	16734670	chunk0091_418_1	5.45876	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	16734564	16734734	-41882882	-	AluJr	SINE	Alu	0	312	137	1
chr19	16825615	16825616	chunk0091_419_1	42.15808	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	16825338	16825687	-41791929	+	L2b	LINE	L2	2612	2985	-434	1
chr19	17097854	17097855	chunk0091_437_1	53.1324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	17097789	17097983	-41519633	-	MER58A	DNA	hAT-Charlie	0	224	37	1
chr19	17108363	17108364	chunk0091_439_1	9.28589	AR_DHT_Control	chr19	17108363	17108531	-41509085	-	MER20	DNA	hAT-Charlie	-2	217	49	1
chr19	17139250	17139251	chunk0091_441_1	70.76194	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	17139194	17139302	-41478314	-	Tigger3a	DNA	TcMar-Tigger	-134	214	110	1
chr19	17305408	17305409	chunk0091_446_1	10.1061	AR_DHT_Control	chr19	17305317	17305428	-41312188	-	MIR3	SINE	MIR	-102	166	31	1
chr19	17395267	17395268	chunk0091_447_1	5.82105	AR_DHT_Control	chr19	17395196	17395295	-41222321	+	(CTCCTC)n	Simple_repeat	Simple_repeat	1	100	0	1
chr19	17466714	17466715	chunk0091_448_1	7.36432	AR_DHT_Control	chr19	17466219	17466741	-41150875	-	LTR13A	LTR	ERVK	-446	520	1	1
chr19	17516118	17516119	chunk0091_450_1	5.95444	AR_DHT_Control	chr19	17516011	17516123	-41101493	+	MIR	SINE	MIR	68	184	-78	1
chr19	17565781	17565782	chunk0091_451_1	11.1716	AR_DHT_Control	chr19	17565694	17565820	-41051796	-	L1MB5	LINE	L1	-503	5680	5546	1
chr19	18183905	18183906	chunk0091_461_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	18183785	18184013	-40433603	-	MER34B-int	LTR	ERV1	-3672	1264	1024	1
chr19	18377169	18377170	chunk0091_466_1	110.12191	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	18377055	18377212	-40240404	+	L1MB8	LINE	L1	5570	5727	-457	1
chr19	18399157	18399158	chunk0092_2_1	30.99471	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	18399052	18399160	-40218456	+	L1MC5a	LINE	L1	150	262	-2515	1
chr19	18542171	18542172	chunk0092_11_1	9.37933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	18542060	18542236	-40075380	+	MIR	SINE	MIR	56	262	0	1
chr19	18542171	18542172	chunk0092_11_1	9.37933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	18542171	18542376	-40075240	-	MIRb	SINE	MIR	-13	255	51	1
chr19	18629962	18629963	chunk0092_14_1	8.64577	AR_DHT_Control	chr19	18629831	18630301	-39987315	+	L2a	LINE	L2	2924	3370	-56	1
chr19	18698948	18698949	chunk0092_16_1	328.3157	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	18698948	18699064	-39918552	-	OldhAT1	DNA	hAT-Ac	-159	2689	2570	1
chr19	18713280	18713281	chunk0092_18_1	6.37684	AR_DHT_Control	chr19	18712974	18713474	-39904142	-	L1MB5	LINE	L1	-149	6025	5570	1
chr19	18809615	18809616	chunk0092_23_1	9.21264	AR_DHT_Control	chr19	18809508	18809925	-39807691	-	L1MB5	LINE	L1	-46	6128	5739	1
chr19	18848943	18848944	chunk0092_28_1	9.83318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	18848903	18848975	-39768641	+	Tigger15a	DNA	TcMar-Tigger	26	97	-618	1
chr19	19026940	19026941	chunk0092_30_1	6.6833	AR_DHT_Control	chr19	19026831	19026943	-39590673	+	MLT1M	LTR	ERVL-MaLR	223	345	-327	1
chr19	19087069	19087070	chunk0092_34_1	8.35541	AR_DHT_Control	chr19	19086882	19087285	-39530331	-	L1MA9	LINE	L1	-70	6242	5828	1
chr19	19361285	19361286	chunk0092_39_1	18.152	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	19361196	19361302	-39256314	-	L1MB5	LINE	L1	-404	5770	5650	1
chr19	19606170	19606171	chunk0092_48_1	6.13992	AR_DHT_Control	chr19	19606088	19606607	-39011009	+	MLT1E1A	LTR	ERVL-MaLR	3	678	-2	1
chr19	19763330	19763331	chunk0092_50_1	32.07074	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	19763221	19763463	-38854153	+	ERVL-B4-int	LTR	ERVL	2392	2626	-3088	1
chr19	20083103	20083104	chunk0092_59_1	13.1127	AR_DHT_Control	chr19	20082341	20083300	-38534316	+	LTR5_Hs	LTR	ERVK	1	965	-3	1
chr19	20181944	20181945	chunk0092_61_1	27.0624	AR_DHT_Control	chr19	20181867	20181972	-38435644	+	MIRb	SINE	MIR	157	252	-16	1
chr19	20280561	20280562	chunk0092_62_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	20278393	20282633	-38334983	+	HERVK-int	LTR	ERVK	743	4994	-2542	1
chr19	20310087	20310088	chunk0092_64_1	92.917	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	20309969	20310314	-38307302	-	LTR10C	LTR	ERV1	-246	345	3	1
chr19	20318769	20318770	chunk0092_66_1	5.70484	AR_DHT_Control	chr19	20317907	20319892	-38297724	-	HERVK14-int	LTR	ERVK	-3574	3860	1658	1
chr19	20357859	20357860	chunk0092_67_1	43.7691	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	20357407	20357990	-38259626	-	LTR10C	LTR	ERV1	0	591	5	1
chr19	20567901	20567902	chunk0092_70_1	9.29959	AR_DHT_Control	chr19	20567318	20568963	-38048653	+	HERVL66-int	LTR	ERVL	1	1689	-2640	1
chr19	20589353	20589354	chunk0092_71_1	51.3959	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	20589079	20589411	-38028205	+	AluJr	SINE	Alu	1	293	-19	1
chr19	20675462	20675463	chunk0092_75_1	41.103	AR_DHT_Control	chr19	20675385	20675907	-37941709	+	LTR10A	LTR	ERV1	3	547	0	1
chr19	20769496	20769497	chunk0092_78_1	20.1259	AR_DHT_Control	chr19	20769210	20769665	-37847951	-	LTR10B1	LTR	ERV1	0	547	1	1
chr19	21071378	21071379	chunk0092_81_1	11.1716	AR_DHT_Control	chr19	21071172	21071530	-37546086	+	L1PA17	LINE	L1	5684	6036	-130	1
chr19	21110355	21110356	chunk0092_82_1	81.9349	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	21109606	21112816	-37504800	-	L1PA10	LINE	L1	-11	6342	3099	1
chr19	21237010	21237011	chunk0092_83_1	8.80746	AR_DHT_Control	chr19	21236760	21237345	-37380271	+	LTR10C	LTR	ERV1	1	591	0	1
chr19	21435288	21435289	chunk0092_84_1	4.79975	AR_DHT_Control	chr19	21432170	21435553	-37182063	-	HERV3-int	LTR	ERV1	-677	7749	4233	1
chr19	21694104	21694105	chunk0092_85_1	6.93299	AR_DHT_Control	chr19	21688713	21697447	-36920169	-	HERVS71-int	LTR	ERV1	-69	8909	4	1
chr19	21986418	21986419	chunk0092_88_1	6.48643	AR_DHT_Control	chr19	21986124	21986822	-36630794	+	L1M3a	LINE	L1	4084	4807	-1333	1
chr19	22825985	22825986	chunk0092_93_1	5.44099	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	22825454	22826738	-35790878	-	BSR/Beta	Satellite	Satellite	-14	1286	1	1
chr19	22935906	22935907	chunk0092_94_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	22934026	22936211	-35681405	-	BSR/Beta	Satellite	Satellite	-15	2189	1	1
chr19	23107652	23107653	chunk0092_95_1	6.48643	AR_DHT_Control	chr19	23107609	23107701	-35509915	+	L1ME1	LINE	L1	6078	6164	-9	1
chr19	23113985	23113986	chunk0092_97_1	26.48018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	23113898	23114298	-35503318	+	MER57B1	LTR	ERV1	15	397	-4	1
chr19	23115484	23115485	chunk0092_98_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	23115365	23115880	-35501736	+	MLT1H	LTR	ERVL-MaLR	11	549	0	1
chr19	23350844	23350845	chunk0092_103_1	8.9624	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	23350610	23350997	-35266619	+	MER48	LTR	ERV1	1	407	0	1
chr19	23377838	23377839	chunk0092_104_1	28.5419	AR_DHT_Control	chr19	23377792	23377891	-35239725	-	MIRb	SINE	MIR	-16	252	157	1
chr19	23391448	23391449	chunk0092_105_1	5.77762	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	23391173	23391612	-35226004	+	MER92B	LTR	ERV1	36	562	-74	1
chr19	23403803	23403804	chunk0092_106_1	9.07871	AR_DHT_Control	chr19	23403510	23403964	-35213652	+	LTR22A	LTR	ERVK	1	458	0	1
chr19	23556571	23556572	chunk0092_108_1	9.34168	AR_DHT_Control	chr19	23555114	23557002	-35060614	+	HERVK22-int	LTR	ERVK	2327	4233	-2604	1
chr19	23680361	23680362	chunk0092_109_1	108.9094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	23680322	23680476	-34937140	+	L1PREC2	LINE	L1	5780	5932	-228	1
chr19	23823069	23823070	chunk0092_111_1	76.49678	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	23821505	23823963	-34793653	-	HERV3-int	LTR	ERV1	-5952	2474	3	1
chr19	24191485	24191486	chunk0092_115_1	27.9981	AR_DHT_Control	chr19	24191216	24193405	-34424211	+	BSR/Beta	Satellite	Satellite	1	2162	-1	1
chr19	27392561	27392562	chunk0092_116_1	6.58498	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	27392066	27392952	-31224664	-	LTR12C	LTR	ERV1	0	1579	707	1
chr19	27581789	27581790	chunk0092_117_1	8.27376	AR_DHT_Control	chr19	27579745	27582277	-31035339	+	HERVK11-int	LTR	ERVK	1	2552	-5401	1
chr19	27707140	27707141	chunk0092_118_1	5.95444	AR_DHT_Control	chr19	27705507	27712211	-30905405	-	HERVK11-int	LTR	ERVK	-1188	6765	27	1
chr19	27781064	27781065	chunk0092_120_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	27781024	27781111	-30836505	+	(TTATTG)n	Simple_repeat	Simple_repeat	1	92	0	1
chr19	27825357	27825358	chunk0092_124_1	14.94261	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	27825234	27825414	-30792202	-	MLT1J2	LTR	ERVL-MaLR	-261	187	1	1
chr19	27828855	27828856	chunk0092_126_1	13.9674	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	27828784	27829041	-30788575	-	L1MB4	LINE	L1	-507	5673	5427	1
chr19	27902235	27902236	chunk0092_128_1	102.07403	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	27901910	27902241	-30715375	-	L2b	LINE	L2	-1227	2192	1810	1
chr19	27909003	27909004	chunk0092_129_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	27908980	27909095	-30708521	+	AluJr	SINE	Alu	1	131	-181	1
chr19	27935573	27935574	chunk0092_130_1	73.80393	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	27935486	27935645	-30681971	+	MIR	SINE	MIR	41	231	-31	1
chr19	27997698	27997699	chunk0092_134_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	27997295	27999053	-30618563	-	L1M2	LINE	L1	-1319	4824	3039	1
chr19	28109393	28109394	chunk0092_135_1	11.1388	AR_DHT_Control	chr19	28105898	28111955	-30505661	+	L1PB3	LINE	L1	714	6419	-504	1
chr19	28140763	28140764	chunk0092_138_1	7.77075	AR_DHT_Control	chr19	28140744	28141011	-30476605	-	L1MB7	LINE	L1	-250	5934	5653	1
chr19	28241211	28241212	chunk0092_142_1	19.74091	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	28241030	28241258	-30376358	+	AluJo	SINE	Alu	87	304	-8	1
chr19	28490870	28490871	chunk0092_146_1	24.6146	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	28490852	28490881	-30126735	+	(AAGA)n	Simple_repeat	Simple_repeat	1	29	0	1
chr19	28754733	28754734	chunk0092_147_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	28753936	28756871	-29860745	+	L1PA13	LINE	L1	292	3229	-3537	1
chr19	28844282	28844283	chunk0092_149_1	5.73594	AR_DHT_Control	chr19	28844105	28845075	-29772541	+	MER45R	DNA	hAT-Tip100	488	1519	-62	1
chr19	29650059	29650060	chunk0092_156_1	93.9362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	29650003	29650096	-28967520	-	L1ME1	LINE	L1	-1631	6154	6058	1
chr19	29672006	29672007	chunk0092_157_1	11.2335	AR_DHT_Control	chr19	29671993	29672182	-28945434	-	L2a	LINE	L2	-18	3408	3199	1
chr19	29685652	29685653	chunk0092_161_1	24.3194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	29685633	29685759	-28931857	-	L2a	LINE	L2	0	3426	3274	1
chr19	29905330	29905331	chunk0092_168_1	59.9807	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	29904995	29905399	-28712217	-	L1ME3G	LINE	L1	-523	401	1	1
chr19	29912965	29912966	chunk0092_170_1	100.426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	29912851	29913085	-28704531	+	Charlie1a	DNA	hAT-Charlie	21	248	-1207	1
chr19	29951937	29951938	chunk0092_174_1	9.93187	AR_DHT_Control	chr19	29951846	29952062	-28665554	-	L1MC4	LINE	L1	-1104	6938	6698	1
chr19	29991048	29991049	chunk0092_177_1	167.7243	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	29990884	29991974	-28625642	-	L1ME1	LINE	L1	-1281	4865	3759	1
chr19	30028625	30028626	chunk0092_180_1	6.49378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	30028580	30030640	-28586976	-	L1MB7	LINE	L1	-288	2368	66	1
chr19	30969538	30969539	chunk0092_200_1	43.0749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	30969508	30969539	-27648077	+	(AC)n	Simple_repeat	Simple_repeat	1	31	0	1
chr19	31023216	31023217	chunk0092_202_1	6.33484	AR_DHT_Control	chr19	31023100	31023570	-27594046	+	MER70A	LTR	ERVL	1	467	-5	1
chr19	31203411	31203412	chunk0092_205_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	31202853	31203516	-27414100	-	L2a	LINE	L2	0	3426	2738	1
chr19	31541226	31541227	chunk0092_212_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	31541225	31541334	-27076282	+	MamRTE1	LINE	RTE-BovB	3597	3708	-104	1
chr19	31579453	31579454	chunk0092_216_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	31579292	31579575	-27038041	+	L1M5	LINE	L1	4540	4815	-1331	1
chr19	31684283	31684284	chunk0092_219_1	32.9225	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	31683744	31684689	-26932927	-	L1M5	LINE	L1	-1301	4845	3833	1
chr19	31926427	31926428	chunk0092_221_1	8.99599	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	31926333	31926581	-26691035	+	L1PB3	LINE	L1	4387	4636	-1510	1
chr19	32156752	32156753	chunk0092_224_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	32156174	32157683	-26459933	-	L1ME3G	LINE	L1	-572	352	1	1
chr19	32373962	32373963	chunk0092_229_1	91.4525	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	32373383	32374169	-26243447	-	Tigger6a	DNA	TcMar-Tigger	-211	872	8	1
chr19	32395205	32395206	chunk0092_231_1	25.8534	AR_DHT_Control	chr19	32395095	32395226	-26222390	-	MER106B	DNA	hAT-Charlie	0	1059	925	1
chr19	32478977	32478978	chunk0092_233_1	17.62021	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	32478435	32479072	-26138544	-	L1ME4b	LINE	L1	-4	888	210	1
chr19	32539314	32539315	chunk0092_234_1	15.9754	AR_DHT_Control	chr19	32539266	32539345	-26078271	-	MER54B	LTR	ERVL	-101	692	595	1
chr19	32702679	32702680	chunk0092_238_1	10.6657	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	32702624	32703007	-25914609	-	L1MEc	LINE	L1	-3981	2637	2139	1
chr19	32809217	32809218	chunk0092_241_1	5.90945	AR_DHT_Control	chr19	32808724	32809435	-25808181	-	HAL1M8	LINE	L1	-2005	986	184	1
chr19	32908035	32908036	chunk0092_244_1	13.4821	AR_DHT_Control	chr19	32907889	32908171	-25709445	+	Tigger3c	DNA	TcMar-Tigger	316	602	0	1
chr19	32911037	32911038	chunk0092_247_1	247.0472	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	32910329	32911237	-25706379	-	Tigger3b	DNA	TcMar-Tigger	-283	948	1	1
chr19	32997978	32997979	chunk0092_251_1	4.83532	AR_DHT_Control	chr19	32997790	32998075	-25619541	-	L2a	LINE	L2	-267	3159	2814	1
chr19	33030084	33030085	chunk0092_254_1	81.9911	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	33029692	33030135	-25587481	-	MER68	LTR	ERVL	-8	555	90	1
chr19	33032630	33032631	chunk0092_255_1	98.3657	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	33032615	33032668	-25584948	-	MER112	DNA	hAT-Charlie	-203	58	5	1
chr19	33037275	33037276	chunk0092_257_1	10.3647	AR_DHT_Control	chr19	33036455	33037857	-25579759	+	LTR12C	LTR	ERV1	2	1579	0	1
chr19	33041699	33041700	chunk0092_258_1	6.06873	AR_DHT_Control	chr19	33041658	33041901	-25575715	+	L2a	LINE	L2	3133	3404	-22	1
chr19	33086005	33086006	chunk0092_262_1	6.98722	AR_DHT_Control	chr19	33085999	33086168	-25531448	+	MER20	DNA	hAT-Charlie	32	219	0	1
chr19	33184469	33184470	chunk0092_265_1	5.50529	AR_DHT_Control	chr19	33184039	33184532	-25433084	-	ERVL-B4-int	LTR	ERVL	-624	5090	4599	1
chr19	33234616	33234617	chunk0092_267_1	5.44741	AR_DHT_Control	chr19	33234489	33234624	-25382992	-	MER94	DNA	hAT-Blackjack	-1	133	2	1
chr19	33274424	33274425	chunk0092_268_1	8.35991	AR_DHT_Control	chr19	33274296	33274517	-25343099	+	(GT)n	Simple_repeat	Simple_repeat	1	221	0	1
chr19	33302533	33302534	chunk0092_271_1	5.8664	AR_DHT_Control	chr19	33302502	33302552	-25315064	+	(CGCCCG)n	Simple_repeat	Simple_repeat	1	55	0	1
chr19	33311024	33311025	chunk0092_272_1	24.8297	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	33310550	33311075	-25306541	+	L2a	LINE	L2	2806	3421	-5	1
chr19	33357640	33357641	chunk0092_275_1	10.1096	AR_DHT_Control	chr19	33357557	33357753	-25259863	-	L1M5	LINE	L1	-1219	4927	4727	1
chr19	33491789	33491790	chunk0092_280_1	20.90252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	33491446	33492034	-25125582	-	LTR10C	LTR	ERV1	-1	590	1	1
chr19	34027978	34027979	chunk0092_290_1	26.97483	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	34027825	34028086	-24589530	+	LTR54B	LTR	ERV1	3	295	-203	1
chr19	34216736	34216737	chunk0092_293_1	43.6849	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	34216465	34216757	-24400859	-	AluSq	SINE	Alu	-19	294	1	1
chr19	34259444	34259445	chunk0092_299_1	30.5783	AR_DHT_Control	chr19	34259410	34259495	-24358121	-	L2b	LINE	L2	-4	3371	3289	1
chr19	34594916	34594917	chunk0092_315_1	9.63948	AR_DHT_Control	chr19	34594913	34595002	-24022614	+	L2b	LINE	L2	3289	3371	-4	1
chr19	34654951	34654952	chunk0092_317_1	14.9998	AR_DHT_Control	chr19	34654505	34654961	-23962655	+	LTR8A	LTR	ERV1	265	727	0	1
chr19	34661516	34661517	chunk0092_319_1	103.3003	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	34661281	34661719	-23955897	+	L1ME3B	LINE	L1	4428	4907	-1239	1
chr19	34789482	34789483	chunk0092_325_1	4.22747	AR_DHT_Control	chr19	34788812	34790194	-23827422	-	L1MA8	LINE	L1	-2	6289	4808	1
chr19	34882243	34882244	chunk0092_327_1	16.6858	AR_DHT_Control	chr19	34882169	34882638	-23734978	+	LTR34	LTR	ERV1	205	699	0	1
chr19	35048242	35048243	chunk0092_332_1	10.9285	AR_DHT_Control	chr19	35048226	35048455	-23569161	+	MIR	SINE	MIR	2	262	0	1
chr19	35129858	35129859	chunk0092_336_1	40.77984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	35129352	35130347	-23487269	+	LTR5B	LTR	ERVK	1	1002	0	1
chr19	35147076	35147077	chunk0092_340_1	33.9764	AR_DHT_Control	chr19	35146967	35147266	-23470350	-	MLT1I	LTR	ERVL-MaLR	-2	409	79	1
chr19	35250138	35250139	chunk0092_344_1	8.10775	AR_DHT_Control	chr19	35250091	35250215	-23367401	+	MIRc	SINE	MIR	80	230	-38	1
chr19	35298112	35298113	chunk0092_345_1	8.13752	AR_DHT_Control	chr19	35297119	35299087	-23318529	+	(AC)n	Simple_repeat	Simple_repeat	1	1982	0	1
chr19	35323080	35323081	chunk0092_346_1	14.2268	AR_DHT_Control	chr19	35323040	35323183	-23294433	-	AluSq2	SINE	Alu	-144	169	25	1
chr19	35353968	35353969	chunk0092_347_1	20.3035	AR_DHT_Control	chr19	35353504	35354160	-23263456	-	Tigger2b_Pri	DNA	TcMar-Tigger	-151	917	263	1
chr19	35357425	35357426	chunk0092_349_1	13.53164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	35357183	35357750	-23259866	-	L1MB7	LINE	L1	-174	6010	5433	1
chr19	35388418	35388419	chunk0092_350_1	26.6696	AR_DHT_Control	chr19	35388331	35388426	-23229190	-	LOR1-int	LTR	ERV1	-7422	698	609	1
chr19	35396132	35396133	chunk0092_351_1	8.57499	AR_DHT_Control	chr19	35396106	35396320	-23221296	-	MamRep4096	DNA	hAT-Tip100	-26	400	146	1
chr19	35430619	35430620	chunk0092_352_1	50.4524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	35430410	35430934	-23186682	+	MER87	LTR	ERV1	1	541	0	1
chr19	35469547	35469548	chunk0092_354_1	22.0454	AR_DHT_Control	chr19	35469493	35469865	-23147751	-	Tigger3a	DNA	TcMar-Tigger	-1	347	2	1
chr19	35485643	35485644	chunk0092_355_1	5.6503	AR_DHT_Control	chr19	35485637	35485814	-23131802	-	MER102b	DNA	hAT-Charlie	-3	338	138	1
chr19	35534128	35534129	chunk0092_357_1	74.10518	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	35534028	35534172	-23083444	-	MIRb	SINE	MIR	-36	232	84	1
chr19	35565702	35565703	chunk0092_359_1	52.7093	AR_DHT_Control	chr19	35565358	35565751	-23051865	+	L2a	LINE	L2	2818	3289	-137	1
chr19	35919585	35919586	chunk0092_366_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	35919564	35920020	-22697596	+	L1ME3B	LINE	L1	5436	5893	-349	1
chr19	35999393	35999394	chunk0092_368_1	6.83133	AR_DHT_Control	chr19	35999155	35999425	-22618191	+	LTR16E1	LTR	ERVL	209	503	-35	1
chr19	36035035	36035036	chunk0092_369_1	24.4864	AR_DHT_Control	chr19	36034824	36035119	-22582497	+	L2a	LINE	L2	3032	3391	-35	1
chr19	36221689	36221690	chunk0092_377_1	10.5893	AR_DHT_Control	chr19	36221587	36221919	-22395697	-	L1MC5a	LINE	L1	-1866	911	594	1
chr19	36224625	36224626	chunk0092_378_1	7.58612	AR_DHT_Control	chr19	36224398	36224972	-22392644	-	L1MC5a	LINE	L1	-1250	4896	4294	1
chr19	36246003	36246004	chunk0092_379_1	6.67113	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	36245990	36246274	-22371342	+	(GT)n	Simple_repeat	Simple_repeat	1	285	0	1
chr19	36332284	36332285	chunk0092_381_1	19.38679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	36332168	36333136	-22284480	-	LTR5_Hs	LTR	ERVK	0	968	1	1
chr19	36535088	36535089	chunk0092_389_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	36534640	36535338	-22082278	-	LTR78	LTR	ERV1	-63	1241	510	1
chr19	36939137	36939138	chunk0092_394_1	13.8492	AR_DHT_Control	chr19	36938905	36939523	-21678093	-	L1M7	LINE	L1	-5497	721	110	1
chr19	37247432	37247433	chunk0092_398_1	10.8679	AR_DHT_Control	chr19	37247405	37247542	-21370074	+	L1MB7	LINE	L1	6030	6169	-9	1
chr19	37923593	37923594	chunk0092_411_1	4.19326	AR_DHT_Control	chr19	37923226	37923756	-20693860	-	Tigger3b	DNA	TcMar-Tigger	0	1231	691	1
chr19	37942157	37942158	chunk0092_415_1	16.746	AR_DHT_Control	chr19	37942111	37942555	-20675061	-	L2a	LINE	L2	-5	3421	2942	1
chr19	37957360	37957361	chunk0092_416_1	37.7717	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	37956779	37957545	-20660071	-	L1MB7	LINE	L1	-976	5170	4374	1
chr19	37969869	37969870	chunk0092_418_1	34.107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	37969582	37970076	-20647540	+	L2c	LINE	L2	2876	3384	-3	1
chr19	38060417	38060418	chunk0092_423_1	7.68272	AR_DHT_Control	chr19	38060316	38060491	-20557125	+	MER113B	DNA	hAT-Charlie	50	242	-60	1
chr19	38095696	38095697	chunk0092_427_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	38095578	38095724	-20521892	-	L2a	LINE	L2	-573	2846	2665	1
chr19	38165336	38165337	chunk0092_429_1	116.92088	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	38165234	38165454	-20452162	-	MLT1L	LTR	ERVL-MaLR	0	610	292	1
chr19	38316049	38316050	chunk0092_437_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	38316030	38316062	-20301554	+	(C)n	Simple_repeat	Simple_repeat	1	32	0	1
chr19	38336540	38336541	chunk0092_439_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	38336493	38336564	-20281052	+	G-rich	Low_complexity	Low_complexity	1	71	0	1
chr19	38551538	38551539	chunk0092_441_1	7.37742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	38551456	38551816	-20065800	+	L2	LINE	L2	1805	2187	-1232	1
chr19	38684174	38684175	chunk0092_443_1	23.6397	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	38684076	38684209	-19933407	+	MIR	SINE	MIR	60	259	-3	1
chr19	38862783	38862784	chunk0092_450_1	77.8555	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	38862476	38862887	-19754729	-	LTR35A	LTR	ERV1	0	547	138	1
chr19	39000873	39000874	chunk0092_452_1	8.76676	AR_DHT_Control	chr19	39000825	39000938	-19616678	+	L1ME3D	LINE	L1	6066	6187	-55	1
chr19	39126821	39126822	chunk0092_454_1	22.83872	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39126751	39126961	-19490655	-	MIRb	SINE	MIR	-23	245	6	1
chr19	39143118	39143119	chunk0092_456_1	6.75904	AR_DHT_Control	chr19	39142966	39143270	-19474346	+	L2a	LINE	L2	3032	3415	-11	1
chr19	39150043	39150044	chunk0092_457_1	30.731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39149896	39150111	-19467505	+	L1MB4	LINE	L1	5952	6179	-1	1
chr19	39160559	39160560	chunk0092_460_1	38.33977	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	39160287	39160720	-19456896	-	L2a	LINE	L2	0	3426	2902	1
chr19	39304360	39304361	chunk0093_30_1	6.54253	AR_DHT_Control	chr19	39304149	39304393	-19313223	+	L2a	LINE	L2	2810	3080	-339	1
chr19	39332573	39332574	chunk0093_31_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39332467	39332615	-19285001	+	L1MD	LINE	L1	3622	3759	-2387	1
chr19	39411638	39411639	chunk0093_35_1	6.82686	AR_DHT_Control	chr19	39410928	39411768	-19205848	+	L2a	LINE	L2	2485	3426	0	1
chr19	39430850	39430851	chunk0093_37_1	56.17568	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39430839	39431000	-19186616	-	MER6B	DNA	TcMar-Tigger	-4	206	1	1
chr19	39463594	39463595	chunk0093_39_1	166.1431	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	39463375	39463971	-19153645	-	L1M4	LINE	L1	-3257	2889	2311	1
chr19	39677421	39677422	chunk0093_42_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	39677201	39677441	-18940175	+	L1M4	LINE	L1	4707	4933	-1213	1
chr19	39892458	39892459	chunk0093_45_1	4.83532	AR_DHT_Control	chr19	39892308	39892646	-18724970	+	AluJr	SINE	Alu	1	312	0	1
chr19	39969326	39969327	chunk0093_47_1	9.17597	AR_DHT_Control	chr19	39969195	39969427	-18648189	+	L1ME3A	LINE	L1	5705	5972	-201	1
chr19	40253847	40253848	chunk0093_55_1	41.5281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	40253397	40253988	-18363628	+	L1MC5	LINE	L1	6617	7133	-2171	1
chr19	40349484	40349485	chunk0093_60_1	5.25527	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	40349451	40349643	-18267973	+	MIRb	SINE	MIR	33	228	-40	1
chr19	40433513	40433514	chunk0093_62_1	17.51079	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	40433497	40433706	-18183910	-	L2a	LINE	L2	-338	3081	2819	1
chr19	40453359	40453360	chunk0093_65_1	4.83532	AR_DHT_Control	chr19	40453212	40453378	-18164238	+	L2a	LINE	L2	3076	3239	-187	1
chr19	40720747	40720748	chunk0093_77_1	18.6851	AR_DHT_Control	chr19	40720665	40720872	-17896744	+	L2c	LINE	L2	2918	3126	-261	1
chr19	40726541	40726542	chunk0093_79_1	23.4829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	40726419	40726588	-17891028	-	MER58A	DNA	hAT-Charlie	-23	201	32	1
chr19	41376395	41376396	chunk0093_87_1	7.36432	AR_DHT_Control	chr19	41376243	41376461	-17241155	+	MIR	SINE	MIR	47	262	0	1
chr19	42131679	42131680	chunk0093_90_1	9.21264	AR_DHT_Control	chr19	42131645	42131862	-16485754	-	L2a	LINE	L2	-110	3316	3084	1
chr19	43342253	43342254	chunk0093_95_1	6.48643	AR_DHT_Control	chr19	43341930	43342696	-15274920	+	L1MB3	LINE	L1	5363	6142	-41	1
chr19	43352254	43352255	chunk0093_97_1	15.54852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	43352142	43352285	-15265331	-	L2b	LINE	L2	-21	3405	3249	1
chr19	43694722	43694723	chunk0093_105_1	255.2249	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	43694657	43694731	-14922885	+	(AC)n	Simple_repeat	Simple_repeat	1	74	0	1
chr19	43786905	43786906	chunk0093_106_1	9.21264	AR_DHT_Control	chr19	43786865	43787239	-14830377	+	MLT1H2	LTR	ERVL-MaLR	81	474	-15	1
chr19	44255377	44255378	chunk0093_109_1	24.18334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	44255300	44256661	-14360955	+	L1M4	LINE	L1	1058	2459	-5161	1
chr19	44259056	44259057	chunk0093_110_1	31.4543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	44258677	44259488	-14358128	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	837	-231	1
chr19	44558165	44558166	chunk0093_115_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	44558154	44558195	-14059421	+	(AATC)n	Simple_repeat	Simple_repeat	1	41	0	1
chr19	44694918	44694919	chunk0093_119_1	98.4975	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	44694810	44694990	-13922626	+	L2a	LINE	L2	3219	3426	0	1
chr19	45211016	45211017	chunk0093_125_1	45.91971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	45210850	45211129	-13406487	+	AluJr	SINE	Alu	9	300	-12	1
chr19	45729774	45729775	chunk0093_128_1	13.2288	AR_DHT_Control	chr19	45729556	45729806	-12887810	+	MIR	SINE	MIR	5	261	-1	1
chr19	46030929	46030930	chunk0093_133_1	9.21264	AR_DHT_Control	chr19	46030891	46031467	-12586149	+	LTR14	LTR	ERVK	1	548	0	1
chr19	46315494	46315495	chunk0093_140_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	46315366	46315631	-12301985	-	L1ME1	LINE	L1	-340	5839	5585	1
chr19	46378407	46378408	chunk0093_141_1	13.8104	AR_DHT_Control	chr19	46377973	46378889	-12238727	-	L1ME2	LINE	L1	-2947	3994	2985	1
chr19	46761576	46761577	chunk0093_145_1	42.83064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	46761472	46761682	-11855934	+	MER20B	DNA	hAT-Charlie	217	459	-324	1
chr19	46967953	46967954	chunk0093_152_1	50.9795	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	46967423	46968111	-11649505	+	L2c	LINE	L2	2659	3387	0	1
chr19	47648453	47648454	chunk0093_162_1	69.042	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	47648426	47648538	-10969078	-	L2a	LINE	L2	-107	3319	3198	1
chr19	48061476	48061477	chunk0093_164_1	65.9881	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	48061301	48061512	-10556104	-	MIR	SINE	MIR	-10	252	44	1
chr19	48246346	48246347	chunk0093_165_1	10.1791	AR_DHT_Control	chr19	48246239	48246537	-10371079	-	L1MC4a	LINE	L1	-953	6929	6627	1
chr19	48427916	48427917	chunk0093_172_1	62.4302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	48427870	48428041	-10189575	-	MLT1B	LTR	ERVL-MaLR	-50	417	181	1
chr19	48531944	48531945	chunk0093_175_1	11.1716	AR_DHT_Control	chr19	48531898	48532098	-10085518	-	LTR24	LTR	ERV1	-41	426	222	1
chr19	48539755	48539756	chunk0093_176_1	7.36432	AR_DHT_Control	chr19	48539659	48539853	-10077763	+	MIR	SINE	MIR	51	252	-10	1
chr19	48563299	48563300	chunk0093_177_1	38.6752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	48563268	48563666	-10053950	+	L1ME2z	LINE	L1	5607	6015	-429	1
chr19	48571565	48571566	chunk0093_179_1	54.1264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	48571555	48571628	-10045988	-	L2b	LINE	L2	-15	3360	3287	1
chr19	48582372	48582373	chunk0093_181_1	46.9361	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	48582207	48582550	-10035066	-	L1ME4b	LINE	L1	-254	638	306	1
chr19	49116820	49116821	chunk0093_188_1	151.8403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	49116540	49116879	-9500737	-	L2b	LINE	L2	-3	3372	3031	1
chr19	49165402	49165403	chunk0093_192_1	22.84352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	49165172	49165519	-9452097	-	MER113	DNA	hAT-Charlie	-160	361	3	1
chr19	49229624	49229625	chunk0093_193_1	17.9956	AR_DHT_Control	chr19	49229578	49229968	-9387648	+	LTR40c	LTR	ERVL	1	407	-58	1
chr19	49410100	49410101	chunk0093_200_1	49.5029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	49409976	49410114	-9207502	-	L2c	LINE	L2	-3	3384	3239	1
chr19	49553597	49553598	chunk0093_203_1	20.69804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	49553450	49553649	-9063967	+	AluSz	SINE	Alu	92	298	-14	1
chr19	49672335	49672336	chunk0093_210_1	7.36432	AR_DHT_Control	chr19	49672292	49672856	-8944760	-	L2c	LINE	L2	-380	3039	2363	1
chr19	49766160	49766161	chunk0093_213_1	5.20246	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	49766132	49766271	-8851345	+	MIRc	SINE	MIR	60	199	-31	1
chr19	49791158	49791159	chunk0093_214_1	27.2614	AR_DHT_Control	chr19	49790922	49791170	-8826446	+	L2a	LINE	L2	2821	3076	-343	1
chr19	50010405	50010406	chunk0093_221_1	143.72623	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	50010170	50010630	-8606986	-	L1MEd	LINE	L1	-6151	952	489	1
chr19	50088707	50088708	chunk0093_224_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	50088374	50089109	-8528507	+	L1MC2	LINE	L1	5394	6151	-193	1
chr19	50135988	50135989	chunk0093_225_1	11.8303	Merged_Lncap_AR_Veh	chr19	50135964	50136288	-8481328	+	L1PB1	LINE	L1	5822	6150	-1	1
chr19	50178584	50178585	chunk0093_226_1	38.2853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	50178536	50178846	-8438770	+	L1ME3A	LINE	L1	5807	6159	-14	1
chr19	50242761	50242762	chunk0093_227_1	9.61425	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	50242722	50243153	-8374463	+	Tigger17a	DNA	TcMar-Tigger	68	505	-149	1
chr19	50301066	50301067	chunk0093_228_1	18.161	AR_DHT_Control	chr19	50301033	50301099	-8316517	+	L2c	LINE	L2	3308	3368	-19	1
chr19	50600480	50600481	chunk0093_232_1	12.1095	AR_DHT_Control	chr19	50599919	50600654	-8016962	-	L1MEd	LINE	L1	-5766	1337	540	1
chr19	50610752	50610753	chunk0093_233_1	55.1422	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	50610398	50611135	-8006481	-	L1MC2	LINE	L1	-193	6151	5393	1
chr19	50842322	50842323	chunk0093_239_1	132.65603	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	50842288	50842589	-7775027	+	LTR40a	LTR	ERVL	152	444	-75	1
chr19	50844537	50844538	chunk0093_240_1	26.7116	AR_DHT_Control	chr19	50843092	50845117	-7772499	-	L1PBa	LINE	L1	-4545	2318	2	1
chr19	50850893	50850894	chunk0093_243_1	417.9726	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	50850469	50851070	-7766546	-	LTR40a	LTR	ERVL	0	519	1	1
chr19	50861230	50861231	chunk0093_245_1	8.76615	AR_DHT_Control	chr19	50860689	50861303	-7756313	-	MER77	LTR	ERVL	-7	597	1	1
chr19	50861673	50861674	chunk0093_246_1	6.40649	AR_DHT_Control	chr19	50861468	50861928	-7755688	-	LTR53B	LTR	ERVL	-12	521	19	1
chr19	50869697	50869698	chunk0093_247_1	180.5596	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr19	50869265	50869850	-7747766	-	LTR40a	LTR	ERVL	-4	515	1	1
chr19	50889882	50889883	chunk0093_252_1	349.3327	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	50889739	50890300	-7727316	-	LTR40a	LTR	ERVL	0	519	4	1
chr19	50921835	50921836	chunk0093_254_1	64.24967	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	50921810	50921837	-7695779	+	(TTGT)n	Simple_repeat	Simple_repeat	1	27	0	1
chr19	51050935	51050936	chunk0093_256_1	7.27655	AR_DHT_Control	chr19	51050275	51051013	-7566603	-	L1ME5	LINE	L1	-335	5859	5083	1
chr19	51067077	51067078	chunk0093_257_1	32.1331	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	51066804	51067163	-7550453	-	LTR37A	LTR	ERV1	0	426	59	1
chr19	51071310	51071311	chunk0093_259_1	133.5456	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	51071123	51071547	-7546069	+	LTR3B	LTR	ERVK	1	433	-4	1
chr19	51221661	51221662	chunk0093_267_1	5.44741	AR_DHT_Control	chr19	51221286	51222854	-7394762	+	L1ME1	LINE	L1	5315	6195	-1800	1
chr19	51295259	51295260	chunk0093_268_1	4.22747	AR_DHT_Control	chr19	51295197	51295524	-7322092	-	MER102a	DNA	hAT-Charlie	0	330	40	1
chr19	51540142	51540143	chunk0093_271_1	7.48058	AR_DHT_Control	chr19	51539970	51540778	-7076838	+	L1MA7	LINE	L1	5526	6290	-1	1
chr19	51780844	51780845	chunk0093_277_1	17.487	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	51780526	51781861	-6835755	+	ERVL-B4-int	LTR	ERVL	4126	5487	-227	1
chr19	51808821	51808822	chunk0093_280_1	7.63982	AR_DHT_Control	chr19	51807485	51811585	-6806031	-	HERVK3-int	LTR	ERVK	-3033	4169	8	1
chr19	51919789	51919790	chunk0093_281_1	17.5189	AR_DHT_Control	chr19	51919671	51920146	-6697470	+	LTR3A	LTR	ERVK	1	484	0	1
chr19	51960627	51960628	chunk0093_282_1	111.017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	51960242	51961231	-6656385	-	LTR5B	LTR	ERVK	0	1002	1	1
chr19	51983602	51983603	chunk0093_285_1	91.28165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	51982961	51983945	-6633671	+	LTR5B	LTR	ERVK	1	1001	-1	1
chr19	52026893	52026894	chunk0093_287_1	8.16452	AR_DHT_Control	chr19	52026212	52027168	-6590448	+	LTR5B	LTR	ERVK	5	1002	0	1
chr19	52123575	52123576	chunk0093_288_1	11.0973	AR_DHT_Control	chr19	52123367	52123645	-6493971	+	AluJb	SINE	Alu	1	296	-16	1
chr19	52339041	52339042	chunk0093_291_1	81.7909	AR_DHT_Control	chr19	52338779	52339732	-6277884	-	LTR5B	LTR	ERVK	0	1002	1	1
chr19	52343165	52343166	chunk0093_292_1	23.4844	AR_DHT_Control	chr19	52342824	52343172	-6274444	+	L2a	LINE	L2	2161	2536	-883	1
chr19	52371796	52371797	chunk0093_293_1	16.7906	AR_DHT_Control	chr19	52371690	52371895	-6245721	+	MIR	SINE	MIR	29	244	-18	1
chr19	52395628	52395629	chunk0093_294_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	52395479	52395929	-6221687	-	MER70A	LTR	ERVL	0	472	1	1
chr19	52558919	52558920	chunk0093_296_1	25.4023	AR_DHT_Control	chr19	52558696	52559661	-6057955	+	LTR5_Hs	LTR	ERVK	1	968	0	1
chr19	52685895	52685896	chunk0093_298_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	52685614	52685926	-5931690	+	AluSq2	SINE	Alu	1	312	-1	1
chr19	52723789	52723790	chunk0093_299_1	34.16828	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	52723560	52724546	-5893070	-	LTR5B	LTR	ERVK	0	1002	3	1
chr19	53444042	53444043	chunk0093_305_1	14.2911	AR_DHT_Control	chr19	53443774	53444761	-5172855	+	LTR5B	LTR	ERVK	1	1002	0	1
chr19	53498233	53498234	chunk0093_307_1	67.42626	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	53497640	53498598	-5119018	+	LTR5B	LTR	ERVK	1	1002	0	1
chr19	53519524	53519525	chunk0093_309_1	13.99201	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	53519471	53519646	-5097970	+	LTR46	LTR	ERV1	124	298	-162	1
chr19	53622305	53622306	chunk0093_313_1	71.7777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	53622071	53622319	-4995297	+	LTR80B	LTR	ERVL	1	279	-305	1
chr19	53864625	53864626	chunk0093_319_1	8.08101	AR_DHT_Control	chr19	53864253	53864794	-4752822	+	ERVL-E-int	LTR	ERVL	3908	4595	-1059	1
chr19	54008789	54008790	chunk0093_321_1	34.75977	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	54008515	54008861	-4608755	+	L2c	LINE	L2	2910	3246	-129	1
chr19	54048688	54048689	chunk0093_323_1	8.27376	AR_DHT_Control	chr19	54048489	54048801	-4568815	+	L1MB7	LINE	L1	5452	5763	-421	1
chr19	54366414	54366415	chunk0093_331_1	14.2911	AR_DHT_Control	chr19	54366238	54366489	-4251127	+	MST-int	LTR	ERVL-MaLR	95	369	-1282	1
chr19	54467961	54467962	chunk0093_334_1	6.58746	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	54467940	54468128	-4149488	+	MIR	SINE	MIR	28	222	-46	1
chr19	54552854	54552855	chunk0093_335_1	5.77445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	54552303	54552868	-4064748	+	(TG)n	Simple_repeat	Simple_repeat	1	570	0	1
chr19	54674221	54674222	chunk0093_337_1	55.8397	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	54674106	54674246	-3943370	+	HUERS-P3-int	LTR	ERV1	4549	4682	-4237	1
chr19	54793479	54793480	chunk0093_338_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	54792874	54793579	-3824037	-	L1MEg	LINE	L1	-4485	1757	1026	1
chr19	54815405	54815406	chunk0093_339_1	28.1269	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	54815248	54815503	-3802113	-	L1M5	LINE	L1	-1170	4976	4710	1
chr19	54831541	54831542	chunk0093_341_1	40.2193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	54831515	54831778	-3785838	-	L1M5	LINE	L1	-1170	4976	4699	1
chr19	54867990	54867991	chunk0093_344_1	51.0428	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	54867953	54868351	-3749265	-	L1M5	LINE	L1	-1170	4976	4568	1
chr19	55002501	55002502	chunk0093_346_1	93.12533	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	55002467	55002587	-3615029	+	L1MC3	LINE	L1	6301	6441	-1344	1
chr19	55026400	55026401	chunk0093_348_1	12.8869	AR_DHT_Control	chr19	55026217	55026559	-3591057	-	L1MB2	LINE	L1	-50	6121	5772	1
chr19	55065694	55065695	chunk0093_350_1	10.3593	AR_DHT_Control	chr19	55065535	55065731	-3551885	-	MER58A	DNA	hAT-Charlie	0	224	24	1
chr19	55338877	55338878	chunk0093_353_1	21.9695	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	55338694	55338912	-3278704	+	Tigger3c	DNA	TcMar-Tigger	363	602	0	1
chr19	55479797	55479798	chunk0093_355_1	8.60744	AR_DHT_Control	chr19	55479778	55480100	-3137516	-	L2a	LINE	L2	-1825	1594	1237	1
chr19	55519886	55519887	chunk0093_356_1	4.06036	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	55519504	55519999	-3097617	+	(TGA)n	Simple_repeat	Simple_repeat	2	481	0	1
chr19	55527472	55527473	chunk0093_358_1	8.3168	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	55526811	55527793	-3089823	+	(CACACT)n	Simple_repeat	Simple_repeat	1	942	0	1
chr19	55582208	55582209	chunk0093_360_1	65.23295	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	55581866	55582227	-3035389	+	L1ME4b	LINE	L1	237	647	-245	1
chr19	55676571	55676572	chunk0093_366_1	269.69701	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	55676523	55676713	-2940903	-	MIRb	SINE	MIR	0	268	51	1
chr19	55684019	55684020	chunk0093_369_1	14.52595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	55683905	55684021	-2933595	+	MER46C	DNA	TcMar-Tigger	214	330	-8	1
chr19	55956660	55956661	chunk0093_372_1	155.5239	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr19	55956658	55956745	-2660871	-	MER81	DNA	hAT-Blackjack	-26	88	2	1
chr19	55967966	55967967	chunk0093_373_1	8.27376	AR_DHT_Control	chr19	55967905	55968156	-2649460	-	MER58B	DNA	hAT-Charlie	-1	340	86	1
chr19	56091121	56091122	chunk0093_374_1	7.33982	AR_DHT_Control	chr19	56091073	56091277	-2526339	+	HAL1ME	LINE	L1	2250	2462	-3	1
chr19	56105436	56105437	chunk0093_375_1	32.1494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	56105416	56105508	-2512108	+	HY3	scRNA	scRNA	2	100	-1	1
chr19	56142511	56142512	chunk0093_377_1	7.30744	AR_DHT_Control	chr19	56142407	56142601	-2475015	+	MER20	DNA	hAT-Charlie	1	213	-6	1
chr19	56283402	56283403	chunk0093_379_1	6.93299	AR_DHT_Control	chr19	56283299	56283469	-2334147	-	MIRb	SINE	MIR	-16	252	65	1
chr19	56345979	56345980	chunk0093_381_1	79.558	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	56345128	56346607	-2271009	-	MER4-int	LTR	ERV1	-4301	2297	181	1
chr19	56651164	56651165	chunk0093_392_1	8.52187	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	56651107	56651340	-1966276	-	MIR	SINE	MIR	-11	251	13	1
chr19	56725089	56725090	chunk0093_393_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	56725068	56725522	-1892094	+	LTR8A	LTR	ERV1	1	454	-273	1
chr19	56747729	56747730	chunk0093_394_1	9.14794	AR_DHT_Control	chr19	56747350	56747856	-1869760	+	MER74A	LTR	ERVL	7	524	-34	1
chr19	56846745	56846746	chunk0093_396_1	48.8676	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	56846686	56847372	-1770244	-	L1MEi	LINE	L1	-409	1803	1011	1
chr19	56855784	56855785	chunk0093_397_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	56855764	56855809	-1761807	+	MADE1	DNA	TcMar-Mariner	1	46	-34	1
chr19	56931092	56931093	chunk0093_399_1	96.51	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	56930430	56931568	-1686048	-	Arthur1	DNA	hAT-Tip100	-1275	2672	1365	1
chr19	56934939	56934940	chunk0093_401_1	9.68458	AR_DHT_Control	chr19	56934814	56934950	-1682666	-	L1MB3	LINE	L1	-8	6175	6048	1
chr19	56934939	56934940	chunk0093_401_1	9.68458	AR_DHT_Control	chr19	56934931	56935257	-1682359	+	L1MA1	LINE	L1	5868	6198	-104	1
chr19	56958875	56958876	chunk0093_403_1	24.1442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	56958816	56958895	-1658721	-	L2a	LINE	L2	-1	3425	3334	1
chr19	57302829	57302830	chunk0093_412_1	7.67158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr19	57301226	57303573	-1314043	-	L1M2a	LINE	L1	-5052	2514	399	1
chr19	57461510	57461511	chunk0093_417_1	44.4707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	57461105	57461790	-1155826	+	L1M2	LINE	L1	4083	4778	-1365	1
chr19	57805069	57805070	chunk0093_423_1	23.1128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	57804788	57805077	-812539	-	AluYa5	SINE	Alu	-14	297	5	1
chr19	57811101	57811102	chunk0093_424_1	39.03185	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	57810329	57811158	-806458	+	LTR5_Hs	LTR	ERVK	3	864	-104	1
chr19	57823895	57823896	chunk0093_426_1	32.15446	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	57823626	57824595	-793021	+	LTR5B	LTR	ERVK	3	1002	0	1
chr19	57824379	57824380	chunk0093_427_1	6.13843	AR_DHT_Control	chr19	57823626	57824595	-793021	+	LTR5B	LTR	ERVK	3	1002	0	1
chr19	58182020	58182021	chunk0093_430_1	8.91027	AR_DHT_Control	chr19	58181730	58182087	-435529	+	L1M5	LINE	L1	4061	4447	-1699	1
chr19	58305856	58305857	chunk0093_435_1	86.3851	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr19	58305670	58306101	-311515	+	LTR3	LTR	ERVK	1	432	0	1
chr19	58315169	58315170	chunk0093_436_1	59.54062	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr19	58314839	58315267	-302349	+	LTR3	LTR	ERVK	1	437	0	1
chr2	22905	22906	chunk0093_2_1	29.3569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	22094	23394	-242170135	-	L1PA14	LINE	L1	-1	6160	4868	1
chr2	96154	96155	chunk0093_10_1	23.4743	AR_DHT_Control	chr2	95055	99392	-242094137	+	L1PA7	LINE	L1	2070	6469	0	1
chr2	145656	145657	chunk0093_13_1	26.5423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	145510	145690	-242047839	+	Tigger1	DNA	TcMar-Tigger	1	163	-2255	1
chr2	168777	168778	chunk0093_15_1	20.58921	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	167888	169232	-242024297	+	L1MC2	LINE	L1	4783	6170	-174	1
chr2	215885	215886	chunk0093_16_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215781	216463	-241977066	-	L1ME1	LINE	L1	-162	6017	5274	1
chr2	256245	256246	chunk0093_19_1	38.01501	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	256112	256409	-241937120	-	L1ME2	LINE	L1	-192	5972	5665	1
chr2	558941	558942	chunk0093_28_1	87.60983	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	558778	558947	-241634582	+	MIR	SINE	MIR	8	183	-79	1
chr2	1096239	1096240	chunk0094_18_1	16.16153	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	1096189	1096781	-241096748	-	L1MA9	LINE	L1	0	6312	5696	1
chr2	1123847	1123848	chunk0094_19_1	14.2024	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	1121880	1123868	-241069661	+	L1MA7	LINE	L1	4662	6743	-819	1
chr2	1141392	1141393	chunk0094_20_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	1141348	1141855	-241051674	-	ERVL-E-int	LTR	ERVL	-3054	2600	1985	1
chr2	1231905	1231906	chunk0094_21_1	16.0684	AR_DHT_Control	chr2	1231810	1231942	-240961587	-	L2a	LINE	L2	0	3426	3247	1
chr2	1358866	1358867	chunk0094_24_1	4.83532	AR_DHT_Control	chr2	1358271	1359002	-240834527	-	L1MB1	LINE	L1	-2890	3250	2481	1
chr2	1724603	1724604	chunk0094_32_1	17.3029	AR_DHT_Control	chr2	1724359	1724607	-240468922	-	LTR47A2	LTR	ERVL	-175	257	1	1
chr2	1728809	1728810	chunk0094_33_1	5.62266	AR_DHT_Control	chr2	1728420	1728868	-240464661	+	Tigger17a	DNA	TcMar-Tigger	61	539	-115	1
chr2	1835577	1835578	chunk0094_37_1	102.8126	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	1835490	1835580	-240357949	+	L1MB2	LINE	L1	6086	6171	0	1
chr2	2046764	2046765	chunk0094_40_1	10.90035	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	2046710	2046834	-240146695	-	L1ME4b	LINE	L1	-562	435	312	1
chr2	2982893	2982894	chunk0094_48_1	8.70654	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	2982529	2983286	-239210243	+	L1PB4	LINE	L1	5018	5774	-382	1
chr2	2984333	2984334	chunk0094_50_1	11.53481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	2983961	2984822	-239208707	+	L1PA16	LINE	L1	4828	5692	-474	1
chr2	3105623	3105624	chunk0094_51_1	6.86304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	3105621	3106017	-239087512	-	MLT1C	LTR	ERVL-MaLR	0	467	36	1
chr2	3110512	3110513	chunk0094_52_1	5.47663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	3110057	3110972	-239082557	+	(GT)n	Simple_repeat	Simple_repeat	1	945	0	1
chr2	3226621	3226622	chunk0094_56_1	6.41766	AR_DHT_Control	chr2	3225545	3226692	-238966837	-	L1MA9	LINE	L1	-59	6253	5065	1
chr2	3312981	3312982	chunk0094_57_1	10.8679	AR_DHT_Control	chr2	3312899	3312995	-238880534	+	MER53	DNA	hAT	97	193	0	1
chr2	3404724	3404725	chunk0094_63_1	69.14956	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	3404645	3404750	-238788779	+	L2b	LINE	L2	3261	3374	-1	1
chr2	3440597	3440598	chunk0094_67_1	26.67304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	3439544	3441914	-238751615	-	L1MC2	LINE	L1	-850	5296	2922	1
chr2	3524225	3524226	chunk0094_75_1	15.9148	AR_DHT_Control	chr2	3523942	3524297	-238669232	-	Charlie1a	DNA	hAT-Charlie	-1033	422	66	1
chr2	3524729	3524730	chunk0094_76_1	86.9564	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	3524647	3524791	-238668738	-	MLT1K	LTR	ERVL-MaLR	-45	550	417	1
chr2	3543267	3543268	chunk0094_77_1	9.68843	AR_DHT_Control	chr2	3543019	3543367	-238650162	+	MER57C1	LTR	ERV1	6	383	-2	1
chr2	3690116	3690117	chunk0094_81_1	6.18774	AR_DHT_Control	chr2	3689061	3690277	-238503252	-	L1M1	LINE	L1	-2826	4736	3462	1
chr2	3783981	3783982	chunk0094_83_1	14.5125	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	3783949	3784159	-238409370	+	L1M5	LINE	L1	5256	5500	-624	1
chr2	3823980	3823981	chunk0094_86_1	291.99673	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	3823872	3824087	-238369442	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr2	3971608	3971609	chunk0094_89_1	5.09613	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	3971302	3972257	-238221272	+	(GT)n	Simple_repeat	Simple_repeat	1	1002	0	1
chr2	4032149	4032150	chunk0094_90_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	4032128	4033326	-238160203	-	L1PA16	LINE	L1	-722	5444	4232	1
chr2	4221377	4221378	chunk0094_101_1	22.8979	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	4221296	4221672	-237971857	-	L1ME3A	LINE	L1	-200	5973	5596	1
chr2	4463100	4463101	chunk0094_117_1	5.13456	AR_DHT_Control	chr2	4463046	4463106	-237730423	+	(TATATT)n	Simple_repeat	Simple_repeat	1	53	0	1
chr2	4533987	4533988	chunk0094_120_1	30.08687	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	4533928	4534409	-237659120	-	MLT1K	LTR	ERVL-MaLR	-77	518	2	1
chr2	4631577	4631578	chunk0094_127_1	20.69431	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	4631282	4632369	-237561160	+	L1MEb	LINE	L1	3697	4834	-1312	1
chr2	4701917	4701918	chunk0094_129_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	4701670	4701965	-237491564	-	HAL1ME	LINE	L1	-181	2284	1972	1
chr2	4880461	4880462	chunk0094_132_1	4.30284	AR_DHT_Control	chr2	4880295	4880475	-237313054	-	MIR	SINE	MIR	-27	235	43	1
chr2	4942767	4942768	chunk0094_137_1	7.35485	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	4942464	4944571	-237248958	-	L2a	LINE	L2	-412	3007	782	1
chr2	4974163	4974164	chunk0094_141_1	5.54895	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	4973257	4974251	-237219278	+	(GT)n	Simple_repeat	Simple_repeat	1	1044	0	1
chr2	5044764	5044765	chunk0094_142_1	8.27376	AR_DHT_Control	chr2	5044687	5044919	-237148610	+	L2c	LINE	L2	3137	3376	-11	1
chr2	5070274	5070275	chunk0094_143_1	6.43609	AR_DHT_Control	chr2	5070016	5070853	-237122676	+	L1MD1	LINE	L1	5404	6240	-2	1
chr2	5151624	5151625	chunk0094_150_1	21.0778	AR_DHT_Control	chr2	5151000	5151783	-237041746	-	L1MB8	LINE	L1	-782	2657	1823	1
chr2	5214868	5214869	chunk0094_155_1	11.7947	AR_DHT_Control	chr2	5214647	5214882	-236978647	-	L1MC4	LINE	L1	-146	7896	7645	1
chr2	5275368	5275369	chunk0094_158_1	12.6608	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	5274230	5275501	-236918028	-	L1PB3	LINE	L1	0	6154	4942	1
chr2	5444919	5444920	chunk0094_166_1	22.09184	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	5444893	5445230	-236748299	+	(TG)n	Simple_repeat	Simple_repeat	1	343	0	1
chr2	5490103	5490104	chunk0094_169_1	110.7851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	5489845	5490611	-236702918	+	L1MA3	LINE	L1	6894	7714	-10	1
chr2	5780979	5780980	chunk0094_176_1	10.6691	AR_DHT_Control	chr2	5780931	5781095	-236412434	-	Kanga11a	DNA	TcMar-Tc2	-541	429	263	1
chr2	5782354	5782355	chunk0094_178_1	18.00031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	5782283	5782671	-236410858	+	Tigger3b	DNA	TcMar-Tigger	1	532	-699	1
chr2	6101161	6101162	chunk0094_184_1	19.35772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	6100907	6102963	-236090566	-	L1PB1	LINE	L1	-2788	4074	1933	1
chr2	6195115	6195116	chunk0094_191_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6194953	6195543	-235997986	-	LTR10C	LTR	ERV1	-1	590	1	1
chr2	6207668	6207669	chunk0094_192_1	14.2911	AR_DHT_Control	chr2	6207514	6207768	-235985761	+	L2c	LINE	L2	3112	3387	0	1
chr2	6274068	6274069	chunk0094_194_1	114.1752	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6274067	6274204	-235919325	-	HAL1	LINE	L1	-2313	194	51	1
chr2	6332877	6332878	chunk0094_197_1	8.27376	AR_DHT_Control	chr2	6331341	6333093	-235860436	-	L1PA6	LINE	L1	-3824	2495	746	1
chr2	6384625	6384626	chunk0094_200_1	10.8743	AR_DHT_Control	chr2	6384418	6385672	-235807857	-	Tigger3b	DNA	TcMar-Tigger	-3	1228	1	1
chr2	6392580	6392581	chunk0094_201_1	7.36432	AR_DHT_Control	chr2	6392469	6392725	-235800804	+	(TG)n	Simple_repeat	Simple_repeat	1	261	0	1
chr2	6494004	6494005	chunk0094_207_1	51.16417	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr2	6493996	6494035	-235699494	+	(TTC)n	Simple_repeat	Simple_repeat	1	40	0	1
chr2	6497320	6497321	chunk0094_210_1	31.9535	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6496856	6497381	-235696148	+	Tigger3b	DNA	TcMar-Tigger	681	1230	-1	1
chr2	6611657	6611658	chunk0094_212_1	28.0956	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6610865	6612119	-235581410	-	L1PA7	LINE	L1	0	6154	4906	1
chr2	6654221	6654222	chunk0094_217_1	3.97245	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6654193	6654388	-235539141	+	L3	LINE	CR1	3696	3891	-208	1
chr2	6760096	6760097	chunk0094_223_1	8.73763	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	6759690	6760528	-235433001	+	(TG)n	Simple_repeat	Simple_repeat	1	869	0	1
chr2	6769744	6769745	chunk0094_224_1	5.73469	AR_DHT_Control	chr2	6769040	6769922	-235423607	+	(GT)n	Simple_repeat	Simple_repeat	1	914	0	1
chr2	6939071	6939072	chunk0094_228_1	7.27655	AR_DHT_Control	chr2	6938555	6940336	-235253193	-	L1MB7	LINE	L1	-1	6681	4881	1
chr2	6946899	6946900	chunk0094_229_1	63.9796	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	6946090	6947532	-235245997	+	Charlie2a	DNA	hAT-Charlie	1078	2610	-251	1
chr2	6977233	6977234	chunk0094_233_1	7.74912	AR_DHT_Control	chr2	6977211	6977322	-235216207	-	MIRc	SINE	MIR	-122	146	35	1
chr2	6988227	6988228	chunk0094_235_1	9.50609	AR_DHT_Control	chr2	6988167	6988994	-235204535	-	L1MC3	LINE	L1	-28	7757	6873	1
chr2	6998429	6998430	chunk0094_236_1	16.88699	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	6998324	6998431	-235195098	-	MIRc	SINE	MIR	-49	219	110	1
chr2	7032043	7032044	chunk0094_241_1	209.6674	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	7031944	7032053	-235161476	+	L1MB8	LINE	L1	6060	6171	-7	1
chr2	7107480	7107481	chunk0094_244_1	6.38514	AR_DHT_Control	chr2	7107377	7107529	-235086000	+	MER5B	DNA	hAT-Charlie	1	159	-19	1
chr2	7639609	7639610	chunk0094_259_1	14.8673	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	7639560	7640187	-234553342	+	MER77	LTR	ERVL	2	604	0	1
chr2	7745549	7745550	chunk0094_262_1	15.339	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	7745015	7745564	-234447965	+	L2c	LINE	L2	2898	3387	0	1
chr2	7932389	7932390	chunk0094_267_1	16.76494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	7932279	7932905	-234260624	+	L1MB3	LINE	L1	5523	6181	-2	1
chr2	7992839	7992840	chunk0094_268_1	7.91804	AR_DHT_Control	chr2	7992618	7992915	-234200614	-	L2b	LINE	L2	0	3375	3059	1
chr2	8205167	8205168	chunk0094_276_1	20.74565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	8205120	8205306	-233988223	-	L1MA4	LINE	L1	-8	6292	6113	1
chr2	8275374	8275375	chunk0094_285_1	12.26933	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	8275348	8276061	-233917468	-	L1MEg	LINE	L1	-5013	1071	370	1
chr2	8486167	8486168	chunk0094_293_1	26.9187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	8486165	8486621	-233706908	-	L1MB1	LINE	L1	0	6168	5719	1
chr2	8572049	8572050	chunk0094_303_1	5.73469	AR_DHT_Control	chr2	8572000	8572112	-233621417	+	L2b	LINE	L2	3239	3375	0	1
chr2	8605751	8605752	chunk0094_304_1	8.91027	AR_DHT_Control	chr2	8605531	8605864	-233587665	+	Tigger3b	DNA	TcMar-Tigger	853	1229	-2	1
chr2	8738356	8738357	chunk0094_306_1	7.36432	AR_DHT_Control	chr2	8738093	8738961	-233454568	+	L1MC4a	LINE	L1	6960	7995	0	1
chr2	8784691	8784692	chunk0094_307_1	9.07871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	8783214	8785582	-233407947	+	L1MC1	LINE	L1	4048	6488	-20	1
chr2	8802256	8802257	chunk0094_308_1	21.29989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	8801913	8802426	-233391103	-	L2b	LINE	L2	-193	3182	2609	1
chr2	8820254	8820255	chunk0094_310_1	7.22694	AR_DHT_Control	chr2	8820190	8820410	-233373119	+	L2a	LINE	L2	3185	3426	0	1
chr2	8891022	8891023	chunk0094_313_1	8.62865	AR_DHT_Control	chr2	8890937	8891061	-233302468	+	L2c	LINE	L2	3226	3354	-33	1
chr2	8921165	8921166	chunk0094_314_1	38.1919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	8920911	8922959	-233270570	-	L1MB7	LINE	L1	-9	2570	265	1
chr2	8995455	8995456	chunk0094_320_1	23.27955	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	8995262	8995573	-233197956	-	MamRep4096	DNA	hAT-Tip100	0	426	115	1
chr2	9001410	9001411	chunk0094_322_1	390.01478	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	9000705	9001550	-233191979	-	Tigger3b	DNA	TcMar-Tigger	-357	874	1	1
chr2	9049315	9049316	chunk0094_330_1	93.7736	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	9048577	9049639	-233143890	+	L1MC4	LINE	L1	6106	7239	-803	1
chr2	9102907	9102908	chunk0094_332_1	20.77647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	9102644	9103077	-233090452	-	MER65C	LTR	ERV1	-2	459	2	1
chr2	9328126	9328127	chunk0094_341_1	71.3317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	9328019	9328363	-232865166	+	L1MB7	LINE	L1	5815	6168	-16	1
chr2	9337913	9337914	chunk0094_346_1	8.75509	AR_DHT_Control	chr2	9337848	9337921	-232855608	-	L1ME2z	LINE	L1	-5	6439	6368	1
chr2	9338695	9338696	chunk0094_347_1	14.3355	AR_DHT_Control	chr2	9338671	9338895	-232854634	-	L2b	LINE	L2	-67	3308	3092	1
chr2	9422801	9422802	chunk0094_349_1	4.03311	AR_DHT_Control	chr2	9422725	9422939	-232770590	-	MIRb	SINE	MIR	-13	255	34	1
chr2	9580404	9580405	chunk0094_356_1	186.4022	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	9580360	9580596	-232612933	-	Tigger3c	DNA	TcMar-Tigger	-7	595	335	1
chr2	9635916	9635917	chunk0094_362_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	9635822	9635956	-232557573	+	L2c	LINE	L2	3234	3365	-22	1
chr2	9640827	9640828	chunk0094_363_1	8.38351	AR_DHT_Control	chr2	9640734	9640943	-232552586	-	L2c	LINE	L2	-223	3164	2939	1
chr2	9759626	9759627	chunk0094_370_1	7.08133	AR_DHT_Control	chr2	9759574	9759643	-232433886	-	MIRc	SINE	MIR	-6	262	192	1
chr2	9852015	9852016	chunk0094_373_1	33.4491	AR_DHT_Control	chr2	9851808	9852070	-232341459	+	MER103C	DNA	hAT-Charlie	35	294	-3	1
chr2	9900710	9900711	chunk0094_376_1	53.25847	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	9900562	9900903	-232292626	-	L2	LINE	L2	-628	2791	2387	1
chr2	9947424	9947425	chunk0094_380_1	21.35109	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	9947094	9947530	-232245999	+	L1ME4b	LINE	L1	357	803	-89	1
chr2	10258865	10258866	chunk0094_390_1	5.12066	AR_DHT_Control	chr2	10258845	10258963	-231934566	-	MER81	DNA	hAT-Blackjack	0	114	1	1
chr2	10303298	10303299	chunk0094_393_1	6.18774	AR_DHT_Control	chr2	10303274	10303304	-231890225	+	(TG)n	Simple_repeat	Simple_repeat	1	31	0	1
chr2	10328357	10328358	chunk0094_394_1	6.48643	AR_DHT_Control	chr2	10328351	10328803	-231864726	+	MLT2B1	LTR	ERVL	1	519	-1	1
chr2	10342612	10342613	chunk0094_395_1	10.179	AR_DHT_Control	chr2	10342475	10342659	-231850870	-	L2b	LINE	L2	-185	3190	3006	1
chr2	10381745	10381746	chunk0094_399_1	56.12759	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	10381704	10382598	-231810931	+	L1MC1	LINE	L1	5411	6333	0	1
chr2	10389791	10389792	chunk0094_400_1	42.0418	AR_DHT_Control	chr2	10389639	10389978	-231803551	-	L1ME3A	LINE	L1	-261	5912	5558	1
chr2	10406257	10406258	chunk0094_402_1	71.65525	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	10406222	10406310	-231787219	+	L2c	LINE	L2	3050	3139	-248	1
chr2	10417465	10417466	chunk0094_404_1	19.18894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	10417460	10417592	-231775937	-	L1MC5a	LINE	L1	-2064	713	578	1
chr2	10437879	10437880	chunk0094_406_1	7.30744	AR_DHT_Control	chr2	10437722	10437962	-231755567	-	L1ME4b	LINE	L1	-495	397	107	1
chr2	10452490	10452491	chunk0094_408_1	135.8336	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	10452192	10452515	-231741014	+	MARNA	DNA	TcMar-Mariner	231	557	-29	1
chr2	10458049	10458050	chunk0094_409_1	92.8749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	10457514	10458363	-231735166	-	MER97a	DNA	hAT-Tip100	-62	828	3	1
chr2	10623577	10623578	chunk0094_425_1	10.3174	AR_DHT_Control	chr2	10623538	10623682	-231569847	+	L2c	LINE	L2	3266	3384	-3	1
chr2	10664924	10664925	chunk0094_426_1	95.48297	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	10664856	10664991	-231528538	+	L1ME4b	LINE	L1	707	853	-39	1
chr2	10859521	10859522	chunk0094_433_1	18.63306	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	10859293	10859943	-231333586	+	L1ME3E	LINE	L1	5532	6227	-15	1
chr2	11066015	11066016	chunk0094_436_1	24.25821	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	11065876	11066036	-231127493	+	MIR3	SINE	MIR	29	205	-3	1
chr2	11483215	11483216	chunk0094_443_1	8.76676	AR_DHT_Control	chr2	11483149	11483342	-230710187	+	(TG)n	Simple_repeat	Simple_repeat	1	194	0	1
chr2	11508557	11508558	chunk0094_446_1	25.43566	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	11508200	11508654	-230684875	-	LTR104_Mam	LTR	Gypsy	-727	782	326	1
chr2	11514208	11514209	chunk0094_449_1	31.7874	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	11514203	11514429	-230679100	-	MIRb	SINE	MIR	-32	236	7	1
chr2	11623140	11623141	chunk0094_460_1	6.48643	AR_DHT_Control	chr2	11623069	11623608	-230569921	+	Tigger3b	DNA	TcMar-Tigger	2	567	-664	1
chr2	11655961	11655962	chunk0095_1_1	15.727	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	11655676	11656021	-230537508	-	L1ME4c	LINE	L1	-363	467	298	1
chr2	11962276	11962277	chunk0095_10_1	10.9345	AR_DHT_Control	chr2	11962226	11962356	-230231173	-	L1M2c	LINE	L1	-4653	2136	2010	1
chr2	12154020	12154021	chunk0095_14_1	24.98561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	12153888	12154359	-230039170	-	L1MC1	LINE	L1	-7	6326	5823	1
chr2	12161139	12161140	chunk0095_16_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	12160670	12161199	-230032330	-	L1M4a2	LINE	L1	-2081	575	40	1
chr2	12686885	12686886	chunk0095_24_1	6.3364	AR_DHT_Control	chr2	12686588	12686950	-229506579	+	L2b	LINE	L2	2987	3375	0	1
chr2	12750670	12750671	chunk0095_25_1	9.01771	AR_DHT_Control	chr2	12749921	12751680	-229441849	-	ERV3-16A3_I-int	LTR	ERVL	-2415	2811	1008	1
chr2	13243283	13243284	chunk0095_31_1	16.18084	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	13243110	13243375	-228950154	+	MIR	SINE	MIR	5	268	0	1
chr2	13413270	13413271	chunk0095_34_1	16.48761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	13413258	13413416	-228780113	-	MIRb	SINE	MIR	-73	195	24	1
chr2	13477770	13477771	chunk0095_37_1	27.2995	AR_DHT_Control	chr2	13477384	13477907	-228715622	-	MER70C	LTR	ERVL	-2	529	3	1
chr2	13503442	13503443	chunk0095_42_1	121.2473	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	13502666	13503763	-228689766	-	L1MEc	LINE	L1	-4788	1627	386	1
chr2	13519628	13519629	chunk0095_44_1	55.5526	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	13519471	13519878	-228673651	-	LTR23	LTR	ERV1	-9	428	1	1
chr2	13683039	13683040	chunk0095_53_1	103.90677	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	13682820	13683235	-228510294	-	LTR3B	LTR	ERVK	-15	422	1	1
chr2	14085052	14085053	chunk0095_57_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14081817	14085231	-228108298	+	L1PA7	LINE	L1	4	3442	-3019	1
chr2	14231870	14231871	chunk0095_59_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14231711	14231977	-227961552	-	L3	LINE	CR1	-115	3984	3700	1
chr2	14258645	14258646	chunk0095_62_1	24.9188	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14258521	14258930	-227934599	-	L2c	LINE	L2	0	3387	2947	1
chr2	14406336	14406337	chunk0095_64_1	22.98394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14405937	14407084	-227786445	+	L2a	LINE	L2	1676	2867	-552	1
chr2	14555157	14555158	chunk0095_72_1	31.6128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	14555117	14555367	-227638162	-	MIRb	SINE	MIR	0	268	1	1
chr2	14576111	14576112	chunk0095_76_1	8.44714	AR_DHT_Control	chr2	14575920	14576302	-227617227	-	MER70B	LTR	ERVL	-147	431	3	1
chr2	14881861	14881862	chunk0095_81_1	12.2728	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	14881855	14882069	-227311460	+	L1MC4	LINE	L1	1716	1942	-4273	1
chr2	15023493	15023494	chunk0095_84_1	25.01932	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	15023037	15023848	-227169681	-	L1ME3G	LINE	L1	-128	796	3	1
chr2	15181055	15181056	chunk0095_89_1	34.2165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	15180822	15181120	-227012409	+	L2b	LINE	L2	3013	3350	-37	1
chr2	15191637	15191638	chunk0095_92_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	15191510	15191672	-227001857	-	MIRc	SINE	MIR	-29	239	63	1
chr2	15360433	15360434	chunk0095_103_1	45.47353	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	15360353	15360649	-226832880	-	AluJr4	SINE	Alu	-31	281	1	1
chr2	15413378	15413379	chunk0095_104_1	6.48643	AR_DHT_Control	chr2	15413262	15413800	-226779729	-	L2c	LINE	L2	0	3375	2792	1
chr2	15561486	15561487	chunk0095_110_1	6.6351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	15561455	15561567	-226631962	+	MIRc	SINE	MIR	45	156	-112	1
chr2	15571999	15572000	chunk0095_111_1	29.34986	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	15571957	15572548	-226620981	+	MER67B	LTR	ERV1	1	633	-28	1
chr2	15580621	15580622	chunk0095_112_1	45.2207	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	15580431	15580732	-226612797	+	ERVL-B4-int	LTR	ERVL	5402	5706	-8	1
chr2	15759407	15759408	chunk0095_117_1	10.68891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	15759384	15759778	-226433751	+	MER97a	DNA	hAT-Tip100	242	661	-229	1
chr2	15832825	15832826	chunk0095_120_1	12.1886	AR_DHT_Control	chr2	15832487	15833091	-226360438	+	L1ME3	LINE	L1	5539	6162	0	1
chr2	15907441	15907442	chunk0095_123_1	58.9264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	15907286	15907832	-226285697	+	L1ME1	LINE	L1	4623	5163	-983	1
chr2	16506463	16506464	chunk0095_128_1	29.56492	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	16506387	16506502	-225687027	-	MIR	SINE	MIR	0	262	152	1
chr2	16514564	16514565	chunk0095_129_1	16.7455	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	16514346	16514646	-225678883	-	MER124	DNA?	DNA?	-30	367	68	1
chr2	16697789	16697790	chunk0095_133_1	7.36432	AR_DHT_Control	chr2	16697089	16698096	-225495433	-	L1PB3	LINE	L1	-1369	4777	3750	1
chr2	16720540	16720541	chunk0095_135_1	34.1708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	16719760	16720647	-225472882	-	L1PA16	LINE	L1	0	6166	5254	1
chr2	16735097	16735098	chunk0095_138_1	13.13556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	16734897	16735176	-225458353	-	ORSL	DNA	hAT-Tip100	0	275	1	1
chr2	17102377	17102378	chunk0095_154_1	8.68286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	17101982	17102651	-225090878	-	Charlie10	DNA	hAT-Charlie	-48	2774	2061	1
chr2	17170232	17170233	chunk0095_158_1	5.6425	AR_DHT_Control	chr2	17169629	17170329	-225023200	+	L2a	LINE	L2	2562	3285	-141	1
chr2	17266236	17266237	chunk0095_164_1	47.5359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	17265361	17266479	-224927050	-	L1MC3	LINE	L1	-1273	6512	5445	1
chr2	17580897	17580898	chunk0095_170_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	17580863	17580982	-224612547	-	L1ME4a	LINE	L1	-4	6120	5987	1
chr2	17888103	17888104	chunk0095_186_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	17887542	17888467	-224305062	-	L1PB1	LINE	L1	-363	6504	5619	1
chr2	18009371	18009372	chunk0095_191_1	12.2633	AR_DHT_Control	chr2	18009121	18009695	-224183834	+	L1ME3A	LINE	L1	5554	6160	-13	1
chr2	18230485	18230486	chunk0095_195_1	57.2622	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	18230057	18231152	-223962377	+	L1PREC2	LINE	L1	2914	4017	-2129	1
chr2	18313653	18313654	chunk0095_199_1	26.09526	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	18313653	18313923	-223879606	-	L2c	LINE	L2	-1	3386	3088	1
chr2	18346188	18346189	chunk0095_201_1	41.5516	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	18346128	18346374	-223847155	-	L2c	LINE	L2	-804	2615	2354	1
chr2	18419533	18419534	chunk0095_204_1	12.1886	AR_DHT_Control	chr2	18419107	18419829	-223773700	+	L1MA4	LINE	L1	5557	6300	0	1
chr2	18709805	18709806	chunk0095_214_1	18.60086	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	18709089	18710006	-223483523	-	L1MDa	LINE	L1	-2889	3648	2870	1
chr2	18745939	18745940	chunk0095_215_1	76.24185	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	18745513	18746123	-223447406	-	L1ME1	LINE	L1	0	6179	5562	1
chr2	18831151	18831152	chunk0095_226_1	47.61992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	18831123	18831316	-223362213	+	L2b	LINE	L2	3182	3368	-19	1
chr2	19178513	19178514	chunk0095_242_1	53.07363	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	19178386	19178517	-223015012	-	MIR3	SINE	MIR	-76	132	9	1
chr2	19284873	19284874	chunk0095_250_1	13.6495	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	19284029	19285798	-222907731	+	L1PREC2	LINE	L1	4394	6160	0	1
chr2	19980154	19980155	chunk0095_279_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	19980046	19980184	-222213345	-	MamSINE1	SINE	tRNA-RTE	-148	142	5	1
chr2	20122265	20122266	chunk0095_284_1	14.77181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	20121867	20122380	-222071149	+	L2a	LINE	L2	2818	3424	-2	1
chr2	20128161	20128162	chunk0095_286_1	24.83691	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20128070	20128340	-222065189	-	L1ME4b	LINE	L1	-329	563	342	1
chr2	20208340	20208341	chunk0095_294_1	58.3023	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	20208290	20208382	-221985147	-	MamRep434	DNA	TcMar-Tigger	-242	184	92	1
chr2	20315284	20315285	chunk0095_299_1	48.31452	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20315181	20315332	-221878197	-	L2b	LINE	L2	-239	3136	2979	1
chr2	20333273	20333274	chunk0095_302_1	68.39361	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20333253	20333518	-221860011	+	AluJr	SINE	Alu	3	294	-18	1
chr2	20351805	20351806	chunk0095_304_1	131.4572	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20351780	20351873	-221841656	+	L2b	LINE	L2	3224	3318	-57	1
chr2	20381759	20381760	chunk0095_306_1	75.224	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	20381318	20382010	-221811519	-	L1M4	LINE	L1	-6635	882	93	1
chr2	20435128	20435129	chunk0095_310_1	125.3546	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	20435019	20435263	-221758266	+	MER68	LTR	ERVL	3	260	-303	1
chr2	20469045	20469046	chunk0095_318_1	13.47569	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20468821	20469073	-221724456	+	L2c	LINE	L2	3112	3386	-1	1
chr2	20536716	20536717	chunk0095_321_1	56.67906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	20536407	20536744	-221656785	+	L1MD3	LINE	L1	7652	7985	-10	1
chr2	20625879	20625880	chunk0095_324_1	35.146	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	20625738	20625884	-221567645	+	L1ME3	LINE	L1	6002	6158	-4	1
chr2	20636656	20636657	chunk0095_327_1	54.1681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	20636564	20636766	-221556763	+	MER112	DNA	hAT-Charlie	34	250	-11	1
chr2	20704559	20704560	chunk0095_331_1	11.55289	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	20704410	20704697	-221488832	+	L1ME4a	LINE	L1	5744	6056	-68	1
chr2	20863137	20863138	chunk0095_344_1	31.126	AR_DHT_Control	chr2	20862876	20863514	-221330015	+	L1MC4	LINE	L1	5254	5912	-1970	1
chr2	21121930	21121931	chunk0095_347_1	13.7636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	21121827	21122937	-221070592	+	L1MEd	LINE	L1	1993	3193	-2953	1
chr2	21643109	21643110	chunk0095_352_1	29.0044	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	21642988	21643210	-220550319	+	MIRb	SINE	MIR	16	248	-20	1
chr2	22592073	22592074	chunk0095_356_1	9.21264	AR_DHT_Control	chr2	22590027	22595389	-219598140	+	L1PA10	LINE	L1	910	6353	0	1
chr2	22773973	22773974	chunk0095_357_1	12.2623	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	22773871	22774323	-219419206	+	L1ME3A	LINE	L1	6446	6884	-149	1
chr2	22939561	22939562	chunk0095_359_1	248.4288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr2	22937810	22939665	-219253864	+	L1ME1	LINE	L1	4226	6150	-29	1
chr2	23033353	23033354	chunk0095_363_1	13.6548	AR_DHT_Control	chr2	23033097	23033430	-219160099	-	MLT1A1	LTR	ERVL-MaLR	0	408	1	1
chr2	23408492	23408493	chunk0095_368_1	300.72695	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	23408327	23408656	-218784873	-	L1ME4a	LINE	L1	-1548	4598	4279	1
chr2	23446158	23446159	chunk0095_371_1	16.09848	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	23445984	23446231	-218747298	-	L1M2	LINE	L1	-922	5221	4960	1
chr2	23679776	23679777	chunk0095_381_1	22.8103	AR_DHT_Control	chr2	23679596	23680005	-218513524	-	L2c	LINE	L2	-3	3384	2942	1
chr2	23728338	23728339	chunk0095_382_1	6.48643	AR_DHT_Control	chr2	23728259	23728837	-218464692	+	L1MC4a	LINE	L1	6058	6516	-1366	1
chr2	23745871	23745872	chunk0095_383_1	283.8203	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	23745731	23745904	-218447625	+	L2a	LINE	L2	3188	3387	-39	1
chr2	24007789	24007790	chunk0095_392_1	15.6143	AR_DHT_Control	chr2	24007620	24008610	-218184919	-	L1MB8	LINE	L1	-57	6121	5043	1
chr2	24051577	24051578	chunk0095_394_1	71.4056	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	24051549	24051638	-218141891	-	L2c	LINE	L2	-3	3384	3263	1
chr2	24243124	24243125	chunk0095_398_1	14.3818	AR_DHT_Control	chr2	24243059	24243339	-217950190	+	L2c	LINE	L2	3084	3426	0	1
chr2	24288983	24288984	chunk0095_400_1	42.49402	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	24288976	24289688	-217903841	-	L1MA9	LINE	L1	-1361	4779	4068	1
chr2	24368546	24368547	chunk0095_402_1	24.2325	AR_DHT_Control	chr2	24368474	24368585	-217824944	-	L2a	LINE	L2	0	3426	3319	1
chr2	24375792	24375793	chunk0095_403_1	39.2625	AR_DHT_Control	chr2	24375782	24375877	-217817652	+	MamRep605	LTR?	LTR?	608	718	-131	1
chr2	24482235	24482236	chunk0095_407_1	16.3135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	24482194	24482336	-217711193	+	L2a	LINE	L2	3267	3423	-3	1
chr2	24545499	24545500	chunk0095_412_1	57.9216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	24544806	24545589	-217647940	+	L1MC3	LINE	L1	6371	7165	-620	1
chr2	24667783	24667784	chunk0095_419_1	7.36432	AR_DHT_Control	chr2	24667706	24668105	-217525424	+	L2a	LINE	L2	3001	3426	0	1
chr2	24754728	24754729	chunk0095_420_1	22.9428	AR_DHT_Control	chr2	24753405	24754837	-217438692	+	L2a	LINE	L2	1851	3426	0	1
chr2	24871913	24871914	chunk0095_427_1	9.56998	AR_DHT_Control	chr2	24871657	24871974	-217321555	+	CR1_Mam	LINE	CR1	1127	1454	-750	1
chr2	25086423	25086424	chunk0095_433_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	25086014	25086592	-217106937	-	L1MC1	LINE	L1	-420	5913	5326	1
chr2	25190692	25190693	chunk0095_438_1	84.3689	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	25190630	25190835	-217002694	-	L2a	LINE	L2	-1	3425	3218	1
chr2	25198874	25198875	chunk0095_439_1	11.1716	AR_DHT_Control	chr2	25198769	25199067	-216994462	+	L1M5	LINE	L1	4720	5020	-1126	1
chr2	25499757	25499758	chunk0095_446_1	6.48643	AR_DHT_Control	chr2	25499587	25499854	-216693675	+	L2a	LINE	L2	3154	3424	-2	1
chr2	25622759	25622760	chunk0095_451_1	60.1045	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	25622736	25623138	-216570391	+	L1MEh	LINE	L1	776	1226	-1009	1
chr2	25711844	25711845	chunk0095_454_1	49.53042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	25711699	25711854	-216481675	+	L1M4	LINE	L1	3505	3731	-2415	1
chr2	25762821	25762822	chunk0095_457_1	6.94497	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	25762692	25763171	-216430358	+	L1MEd	LINE	L1	2057	2589	-3557	1
chr2	25776496	25776497	chunk0095_459_1	114.7559	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	25776070	25776687	-216416842	-	L1MB7	LINE	L1	-58	6126	5465	1
chr2	25787193	25787194	chunk0096_1_1	22.46711	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	25787118	25787564	-216405965	+	LTR40c	LTR	ERVL	5	459	-6	1
chr2	25830169	25830170	chunk0096_6_1	15.6143	AR_DHT_Control	chr2	25829765	25830349	-216363180	+	L1MD2	LINE	L1	442	1205	-5335	1
chr2	26011275	26011276	chunk0096_11_1	15.83464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	26011014	26011320	-216182209	+	L1ME3A	LINE	L1	5821	6158	-15	1
chr2	26073605	26073606	chunk0096_14_1	29.05981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	26073481	26073675	-216119854	-	LTR33B	LTR	ERVL	-294	209	11	1
chr2	26115321	26115322	chunk0096_16_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	26115053	26115770	-216077759	+	L1MB7	LINE	L1	5454	6184	0	1
chr2	26141827	26141828	chunk0096_17_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	26141431	26142189	-216051340	+	L1MC5	LINE	L1	8052	8836	-468	1
chr2	26303071	26303072	chunk0096_20_1	37.51576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	26301463	26304444	-215889085	+	HERV15-int	LTR	ERV1	3776	6762	-1973	1
chr2	26347683	26347684	chunk0096_21_1	13.67227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	26347450	26347688	-215845841	-	L3b	LINE	CR1	-27	5205	4952	1
chr2	26350963	26350964	chunk0096_23_1	4.93365	AR_DHT_Control	chr2	26350852	26351047	-215842482	-	MER47B	DNA	TcMar-Tigger	-1	417	213	1
chr2	26380307	26380308	chunk0096_24_1	18.6213	AR_DHT_Control	chr2	26379707	26381015	-215812514	-	L1MC5	LINE	L1	-1339	7965	6611	1
chr2	26635802	26635803	chunk0096_28_1	10.4206	AR_DHT_Control	chr2	26635740	26635803	-215557726	-	L1ME4b	LINE	L1	-105	787	722	1
chr2	26663591	26663592	chunk0096_29_1	12.1886	AR_DHT_Control	chr2	26662922	26663706	-215529823	-	L1MC2	LINE	L1	-2	6342	5562	1
chr2	26867371	26867372	chunk0096_34_1	14.3256	AR_DHT_Control	chr2	26867345	26867443	-215326086	-	L1ME3G	LINE	L1	-360	564	466	1
chr2	26870100	26870101	chunk0096_36_1	70.0962	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	26870028	26870573	-215322956	-	L1ME3G	LINE	L1	-1938	4208	3626	1
chr2	26900571	26900572	chunk0096_41_1	135.5403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	26900337	26900715	-215292814	-	L1ME3A	LINE	L1	-222	5951	5525	1
chr2	27015254	27015255	chunk0096_47_1	39.2085	AR_DHT_Control	chr2	27015230	27015454	-215178075	-	MIR	SINE	MIR	-9	253	12	1
chr2	27273298	27273299	chunk0096_53_1	8.27376	AR_DHT_Control	chr2	27273122	27273417	-214920112	-	L2a	LINE	L2	-207	3219	2882	1
chr2	27398307	27398308	chunk0096_57_1	6.48643	AR_DHT_Control	chr2	27397979	27398541	-214794988	+	L1MB7	LINE	L1	4555	5202	-944	1
chr2	27596887	27596888	chunk0096_61_1	15.54852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	27596829	27597158	-214596371	-	L1ME5	LINE	L1	-243	5951	5710	1
chr2	27691213	27691214	chunk0096_66_1	34.8548	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	27690732	27691589	-214501940	-	L1PBa	LINE	L1	-2204	4658	3820	1
chr2	27830116	27830117	chunk0096_75_1	42.94777	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	27829666	27830227	-214363302	-	L1MEi	LINE	L1	-1653	559	28	1
chr2	27944287	27944288	chunk0096_80_1	40.644	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	27944208	27944896	-214248633	-	L1ME1	LINE	L1	-3	6349	5654	1
chr2	27951918	27951919	chunk0096_81_1	4.88663	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	27951852	27952326	-214241203	-	L1MEf	LINE	L1	-3534	2612	2113	1
chr2	27976004	27976005	chunk0096_85_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	27973904	27976711	-214216818	+	L1ME1	LINE	L1	3748	6547	-30	1
chr2	27985795	27985796	chunk0096_86_1	12.86534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	27985737	27985836	-214207693	+	L2b	LINE	L2	3228	3332	-43	1
chr2	27999113	27999114	chunk0096_88_1	101.1743	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	27999003	27999151	-214194378	+	L2c	LINE	L2	3190	3343	-44	1
chr2	28036826	28036827	chunk0096_92_1	15.2809	AR_DHT_Control	chr2	28036815	28037010	-214156519	+	L2c	LINE	L2	3192	3387	0	1
chr2	28071398	28071399	chunk0096_93_1	247.837	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	28071231	28072008	-214121521	-	L1MC5	LINE	L1	-416	8888	8070	1
chr2	28089661	28089662	chunk0096_94_1	23.6389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	28089514	28089715	-214103814	-	MIRb	SINE	MIR	-38	230	31	1
chr2	28155100	28155101	chunk0096_96_1	23.7999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	28155038	28155239	-214038290	-	Tigger16a	DNA	TcMar-Tigger	-192	765	545	1
chr2	28319353	28319354	chunk0096_106_1	35.85398	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	28319310	28319452	-213874077	-	MER91A	DNA	hAT-Tip100	-27	169	21	1
chr2	28568804	28568805	chunk0096_114_1	32.4818	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	28568778	28568842	-213624687	-	L2c	LINE	L2	-279	3108	3044	1
chr2	28603387	28603388	chunk0096_117_1	115.0667	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	28603223	28603416	-213590113	+	L1ME3E	LINE	L1	5960	6185	-57	1
chr2	28633353	28633354	chunk0096_124_1	17.58574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	28633305	28633495	-213560034	+	MIRb	SINE	MIR	37	243	-25	1
chr2	28635335	28635336	chunk0096_126_1	44.36636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	28635324	28635473	-213558056	-	MIR3	SINE	MIR	-9	199	30	1
chr2	28736906	28736907	chunk0096_134_1	9.13774	AR_DHT_Control	chr2	28736893	28737040	-213456489	-	L1ME3	LINE	L1	-112	6050	5908	1
chr2	28746678	28746679	chunk0096_135_1	182.4068	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	28746428	28746718	-213446811	+	Tigger16b	DNA	TcMar-Tigger	34	336	0	1
chr2	28760505	28760506	chunk0096_139_1	7.36432	AR_DHT_Control	chr2	28760356	28760611	-213432918	+	Tigger3c	DNA	TcMar-Tigger	316	602	0	1
chr2	28796860	28796861	chunk0096_140_1	54.6617	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	28794868	28797780	-213395749	-	L1PA16	LINE	L1	-24	6142	3190	1
chr2	29005880	29005881	chunk0096_143_1	7.26927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	29004559	29006509	-213187020	+	(GT)n	Simple_repeat	Simple_repeat	1	1975	0	1
chr2	29112540	29112541	chunk0096_146_1	7.36432	AR_DHT_Control	chr2	29111497	29112684	-213080845	-	L1ME3Cz	LINE	L1	-743	5663	4458	1
chr2	29233785	29233786	chunk0096_153_1	14.14907	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	29233775	29233995	-212959534	-	L2c	LINE	L2	-69	3318	3098	1
chr2	29533717	29533718	chunk0096_166_1	15.06	AR_DHT_Control	chr2	29533673	29533792	-212659737	-	L2b	LINE	L2	-18	3357	3240	1
chr2	29611409	29611410	chunk0096_171_1	156.7913	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	29611362	29611459	-212582070	-	MIRc	SINE	MIR	-8	260	160	1
chr2	29723418	29723419	chunk0096_173_1	8.93364	AR_DHT_Control	chr2	29722609	29723567	-212469962	+	L2a	LINE	L2	2260	3425	-1	1
chr2	29772249	29772250	chunk0096_180_1	82.2663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	29771833	29772778	-212420751	+	HAL1	LINE	L1	1580	2499	-8	1
chr2	29795651	29795652	chunk0096_182_1	43.26304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	29795121	29795694	-212397835	+	L1ME4c	LINE	L1	5365	5813	-311	1
chr2	29838587	29838588	chunk0096_184_1	20.7341	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	29838456	29838946	-212354583	+	L1ME2	LINE	L1	5678	6331	-3	1
chr2	29875019	29875020	chunk0096_185_1	7.22694	AR_DHT_Control	chr2	29874956	29875385	-212318144	+	L1MB4	LINE	L1	5579	6126	-54	1
chr2	29908869	29908870	chunk0096_187_1	23.93362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	29908831	29908929	-212284600	+	L2c	LINE	L2	3241	3327	-60	1
chr2	29956802	29956803	chunk0096_188_1	8.27376	AR_DHT_Control	chr2	29956148	29957398	-212236131	-	L1M4a1	LINE	L1	-1240	1339	11	1
chr2	30125116	30125117	chunk0096_193_1	12.6489	AR_DHT_Control	chr2	30124692	30126563	-212066966	+	L1MD1	LINE	L1	2392	4773	-1764	1
chr2	30185264	30185265	chunk0096_197_1	95.0128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	30185109	30185454	-212008075	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	1
chr2	30326226	30326227	chunk0096_205_1	7.87199	AR_DHT_Control	chr2	30326191	30326430	-211867099	-	MIRb	SINE	MIR	-25	243	5	1
chr2	30355899	30355900	chunk0096_206_1	9.68843	AR_DHT_Control	chr2	30355829	30355916	-211837613	-	MIR3	SINE	MIR	-59	149	38	1
chr2	30503407	30503408	chunk0096_211_1	10.3174	AR_DHT_Control	chr2	30503333	30503452	-211690077	-	L1MB8	LINE	L1	-480	5704	5588	1
chr2	30604774	30604775	chunk0096_222_1	92.29727	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	30604764	30604937	-211588592	+	L3	LINE	CR1	3777	3947	-152	1
chr2	30804191	30804192	chunk0096_233_1	27.6901	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	30804137	30804206	-211389323	+	MER103C	DNA	hAT-Charlie	89	154	-143	1
chr2	30846575	30846576	chunk0096_235_1	17.6003	AR_DHT_Control	chr2	30846528	30846639	-211346890	-	L2c	LINE	L2	-41	3346	3235	1
chr2	30873052	30873053	chunk0096_236_1	15.3744	AR_DHT_Control	chr2	30872709	30873116	-211320413	+	L2a	LINE	L2	2713	3178	-248	1
chr2	31091335	31091336	chunk0096_242_1	41.41818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31091134	31091469	-211102060	+	MER58B	DNA	hAT-Charlie	1	341	0	1
chr2	31194296	31194297	chunk0096_246_1	64.88495	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	31194181	31194358	-210999171	+	L2c	LINE	L2	3177	3380	-7	1
chr2	31224848	31224849	chunk0096_248_1	5.20246	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31224497	31225282	-210968247	+	L1MC5	LINE	L1	4067	4830	-1316	1
chr2	31286491	31286492	chunk0096_251_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31286432	31286517	-210907012	-	MIR3	SINE	MIR	-95	113	34	1
chr2	31295227	31295228	chunk0096_252_1	6.40219	AR_DHT_Control	chr2	31295208	31295984	-210897545	+	LTR1B	LTR	ERV1	1	822	-2	1
chr2	31314181	31314182	chunk0096_254_1	32.1074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31313725	31314421	-210879108	-	L1MC1	LINE	L1	-8	6325	5616	1
chr2	31390914	31390915	chunk0096_257_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31389846	31391841	-210801688	-	L1MC1	LINE	L1	-5	6503	4487	1
chr2	31423169	31423170	chunk0096_259_1	49.4585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31422789	31423225	-210770304	+	MLT1J1	LTR	ERVL-MaLR	1	444	0	1
chr2	31558511	31558512	chunk0096_265_1	18.13533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	31558296	31558657	-210634872	-	MLT1C	LTR	ERVL-MaLR	-1	466	107	1
chr2	31922603	31922604	chunk0096_273_1	24.89105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	31922475	31923350	-210270179	-	L1PA15	LINE	L1	-5	6160	5267	1
chr2	31945021	31945022	chunk0096_274_1	13.02355	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	31944843	31945461	-210248068	-	L1ME3Cz	LINE	L1	-7	990	293	1
chr2	31949630	31949631	chunk0096_276_1	5.46037	AR_DHT_Control	chr2	31948876	31949928	-210243601	+	L1MA1	LINE	L1	5256	6302	0	1
chr2	31962822	31962823	chunk0096_278_1	98.50017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	31962771	31963268	-210230261	+	MLT2B4	LTR	ERVL	1	502	-54	1
chr2	32128670	32128671	chunk0096_281_1	16.12105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	32128664	32129101	-210064428	-	MLT1C	LTR	ERVL-MaLR	0	467	1	1
chr2	32329281	32329282	chunk0096_284_1	56.2653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	32329020	32329386	-209864143	-	HAL1ME	LINE	L1	-126	2339	1984	1
chr2	32362086	32362087	chunk0096_286_1	28.2221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	32361352	32362313	-209831216	-	L1MC1	LINE	L1	-2	6331	5348	1
chr2	32365212	32365213	chunk0096_287_1	9.99928	AR_DHT_Control	chr2	32365150	32365325	-209828204	+	MIR	SINE	MIR	21	252	-10	1
chr2	32372947	32372948	chunk0096_288_1	11.1716	AR_DHT_Control	chr2	32372858	32373112	-209820417	-	L1ME1	LINE	L1	-431	5748	5486	1
chr2	32428135	32428136	chunk0096_290_1	31.75286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	32427608	32428508	-209765021	-	L1M4a1	LINE	L1	-1399	1180	251	1
chr2	32440603	32440604	chunk0096_291_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	32440556	32440684	-209752845	-	MIRc	SINE	MIR	-15	253	123	1
chr2	32727344	32727345	chunk0096_301_1	144.82217	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	32727105	32727967	-209465562	+	Charlie1a	DNA	hAT-Charlie	612	1452	-3	1
chr2	32916274	32916275	chunk0096_304_1	23.4224	Merged_Lncap_AR_Veh	chr2	32916229	32916625	-209276904	+	(G)n	Simple_repeat	Simple_repeat	1	396	0	1
chr2	32970203	32970204	chunk0096_305_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	32969283	32971002	-209222527	-	L1PA15	LINE	L1	-13	6772	5029	1
chr2	33064822	33064823	chunk0096_311_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	33064815	33065279	-209128250	-	L1ME2z	LINE	L1	-1890	4256	3797	1
chr2	33190601	33190602	chunk0096_316_1	20.03843	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	33190493	33190697	-209002832	+	MIRc	SINE	MIR	3	254	-14	1
chr2	33574427	33574428	chunk0096_323_1	125.6767	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	33574361	33574546	-208618983	-	MIR	SINE	MIR	-32	230	19	1
chr2	33589844	33589845	chunk0096_325_1	4.06817	AR_DHT_Control	chr2	33589745	33589921	-208603608	+	MER58A	DNA	hAT-Charlie	47	224	0	1
chr2	34109673	34109674	chunk0096_328_1	10.5787	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	34109671	34109823	-208083706	-	L1M8	LINE	L1	-48	2307	2147	1
chr2	34985999	34986000	chunk0096_330_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	34985908	34986374	-207207155	-	Tigger3b	DNA	TcMar-Tigger	-760	471	2	1
chr2	35346319	35346320	chunk0096_335_1	27.8561	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35344328	35346500	-206847029	+	L1M4b	LINE	L1	3171	5408	-1598	1
chr2	35575504	35575505	chunk0096_340_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	35569557	35576209	-206617320	-	L1MA5	LINE	L1	-126	7593	728	1
chr2	35614841	35614842	chunk0096_344_1	100.09857	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35614657	35615993	-206577536	-	L1MEg	LINE	L1	-958	5188	3723	1
chr2	35651223	35651224	chunk0096_345_1	12.4335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35650759	35651488	-206542041	+	L1MEf	LINE	L1	3677	4476	-1670	1
chr2	35651855	35651856	chunk0096_346_1	9.89432	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35651793	35651870	-206541659	+	L1MEf	LINE	L1	4477	4553	-1593	1
chr2	35665745	35665746	chunk0096_347_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35665727	35665818	-206527711	+	L2a	LINE	L2	3315	3406	-20	1
chr2	35822736	35822737	chunk0096_350_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35822606	35822772	-206370757	+	MamRep1151	LTR?	LTR?	509	682	-27	1
chr2	35942467	35942468	chunk0096_351_1	86.9983	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	35942388	35942539	-206250990	-	L1MC4	LINE	L1	-317	7725	7569	1
chr2	36291969	36291970	chunk0096_353_1	22.51772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	36291928	36292113	-205901416	+	MER53	DNA	hAT	1	185	-8	1
chr2	36505937	36505938	chunk0096_366_1	54.33384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	36505561	36506133	-205687396	-	MER6	DNA	TcMar-Tigger	-57	808	241	1
chr2	36664233	36664234	chunk0096_371_1	14.3513	AR_DHT_Control	chr2	36663713	36664400	-205529129	+	L2a	LINE	L2	2677	3416	-10	1
chr2	36779553	36779554	chunk0096_374_1	5.24411	AR_DHT_Control	chr2	36779453	36779719	-205413810	-	L1PA11	LINE	L1	-1	6173	5903	1
chr2	37143463	37143464	chunk0096_386_1	38.7222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	37143442	37143602	-205049927	+	MER2	DNA	TcMar-Tigger	1	157	-188	1
chr2	37679392	37679393	chunk0096_400_1	54.40199	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	37679118	37679463	-204514066	+	MLT1A0	LTR	ERVL-MaLR	4	364	-1	1
chr2	37803236	37803237	chunk0096_401_1	190.2505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	37803159	37803415	-204390114	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	1
chr2	38153093	38153094	chunk0096_414_1	22.8492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	38152603	38153236	-204040293	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	1
chr2	38216067	38216068	chunk0096_418_1	9.21264	AR_DHT_Control	chr2	38215628	38216451	-203977078	-	L1MB8	LINE	L1	-1	6177	5375	1
chr2	38223446	38223447	chunk0096_421_1	89.9183	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	38223335	38223542	-203969987	-	MER58A	DNA	hAT-Charlie	0	224	1	1
chr2	38258727	38258728	chunk0096_423_1	18.28914	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	38258073	38258942	-203934587	-	L1MC1	LINE	L1	0	6333	5441	1
chr2	38322402	38322403	chunk0096_426_1	8.27376	AR_DHT_Control	chr2	38322278	38322425	-203871104	+	L2a	LINE	L2	3256	3425	-1	1
chr2	38460530	38460531	chunk0096_432_1	44.7625	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	38460457	38460625	-203732904	+	L2c	LINE	L2	3182	3356	-31	1
chr2	38570218	38570219	chunk0096_435_1	6.28518	AR_DHT_Control	chr2	38570125	38570249	-203623280	+	MIRb	SINE	MIR	33	174	-94	1
chr2	38613739	38613740	chunk0096_436_1	8.27376	AR_DHT_Control	chr2	38613206	38613785	-203579744	+	LTR26	LTR	ERV1	1	603	0	1
chr2	38767184	38767185	chunk0096_437_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	38767107	38767288	-203426241	+	MIR	SINE	MIR	3	198	-64	1
chr2	39752217	39752218	chunk0096_452_1	12.6499	AR_DHT_Control	chr2	39752187	39752405	-202441124	-	MIR	SINE	MIR	-27	235	7	1
chr2	39762692	39762693	chunk0096_453_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	39762473	39762707	-202430822	-	Tigger10	DNA	TcMar-Tigger	-626	1218	980	1
chr2	39876100	39876101	chunk0096_454_1	13.2288	AR_DHT_Control	chr2	39875845	39876248	-202317281	-	MER92A	LTR	ERV1	0	412	1	1
chr2	39933217	39933218	chunk0096_455_1	19.67562	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	39933101	39933609	-202259920	+	MLT1H	LTR	ERVL-MaLR	18	534	-15	1
chr2	41860668	41860669	chunk0097_15_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	41860441	41861146	-200332383	-	Zaphod	DNA	hAT-Tip100	-1779	2252	1526	1
chr2	42190792	42190793	chunk0097_19_1	10.1791	AR_DHT_Control	chr2	42190741	42190999	-200002530	-	MER58B	DNA	hAT-Charlie	-76	265	1	1
chr2	42250008	42250009	chunk0097_21_1	6.48643	AR_DHT_Control	chr2	42249915	42250123	-199943406	-	MER130	DNA	DNA	-661	933	731	1
chr2	42283958	42283959	chunk0097_22_1	22.33084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	42283714	42283966	-199909563	+	L1ME4b	LINE	L1	414	681	-211	1
chr2	42327374	42327375	chunk0097_25_1	31.53689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	42326894	42327496	-199866033	-	L1MB8	LINE	L1	-57	6121	5500	1
chr2	42348894	42348895	chunk0097_26_1	7.36432	AR_DHT_Control	chr2	42348637	42348931	-199844598	+	AluSc	SINE	Alu	2	294	-15	1
chr2	42379612	42379613	chunk0097_28_1	20.1125	AR_DHT_Control	chr2	42379499	42379903	-199813626	-	MLT1D	LTR	ERVL-MaLR	0	505	92	1
chr2	42447458	42447459	chunk0097_32_1	7.48058	AR_DHT_Control	chr2	42447094	42447516	-199746013	-	L1ME4b	LINE	L1	-66	826	464	1
chr2	42475005	42475006	chunk0097_33_1	5.6425	AR_DHT_Control	chr2	42474992	42475057	-199718472	+	L2b	LINE	L2	3288	3370	-5	1
chr2	42734127	42734128	chunk0097_35_1	31.0525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	42733799	42737642	-199455887	-	L1MA3	LINE	L1	-3266	4299	12	1
chr2	42910866	42910867	chunk0097_40_1	73.3966	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	42910814	42910906	-199282623	+	L2b	LINE	L2	3274	3366	-9	1
chr2	43053646	43053647	chunk0097_42_1	20.7159	AR_DHT_Control	chr2	43053413	43053831	-199139698	-	L1ME3	LINE	L1	0	6162	5693	1
chr2	43279637	43279638	chunk0097_46_1	49.6094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	43279513	43279720	-198913809	+	MER58A	DNA	hAT-Charlie	1	223	-1	1
chr2	43390009	43390010	chunk0097_48_1	27.93529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	43389616	43390047	-198803482	+	L2c	LINE	L2	2963	3387	0	1
chr2	43410776	43410777	chunk0097_50_1	19.0062	AR_DHT_Control	chr2	43410046	43410891	-198782638	+	L1ME1	LINE	L1	5294	6177	-2	1
chr2	43441425	43441426	chunk0097_51_1	5.6425	AR_DHT_Control	chr2	43440743	43441437	-198752092	+	L4_A_Mam	LINE	RTE-X	3615	4381	-609	1
chr2	43531916	43531917	chunk0097_58_1	27.74	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	43531872	43532109	-198661420	+	L1M4	LINE	L1	3951	4169	-1977	1
chr2	44286976	44286977	chunk0097_70_1	22.54076	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	44286930	44287042	-197906487	+	MIR	SINE	MIR	99	212	-50	1
chr2	44465782	44465783	chunk0097_76_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	44465564	44466966	-197726563	+	L1MA5A	LINE	L1	2257	3681	-2695	1
chr2	44540343	44540344	chunk0097_77_1	21.47494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	44539359	44540469	-197653060	-	L1MC4	LINE	L1	-141	7901	6781	1
chr2	44741025	44741026	chunk0097_80_1	26.94844	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	44740986	44741244	-197452285	+	MER5C1	DNA	hAT-Charlie	2	261	-2	1
chr2	45443820	45443821	chunk0097_88_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	45443805	45443822	-196749707	+	(A)n	Simple_repeat	Simple_repeat	1	17	0	1
chr2	45991420	45991421	chunk0097_100_1	6.48643	AR_DHT_Control	chr2	45991306	45991451	-196202078	+	L2a	LINE	L2	3278	3421	-5	1
chr2	46205918	46205919	chunk0097_111_1	9.21264	AR_DHT_Control	chr2	46205772	46206361	-195987168	+	L1M5	LINE	L1	3950	4545	-1601	1
chr2	46575237	46575238	chunk0097_120_1	13.46371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	46575142	46575319	-195618210	+	L1ME3G	LINE	L1	549	769	-155	1
chr2	46725545	46725546	chunk0097_125_1	13.2526	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	46724404	46726094	-195467435	-	L1MEf	LINE	L1	-3025	3519	1670	1
chr2	46732120	46732121	chunk0097_126_1	5.6425	AR_DHT_Control	chr2	46731679	46732239	-195461290	-	Tigger9b	DNA	TcMar-Tigger	0	624	1	1
chr2	47050925	47050926	chunk0097_132_1	7.36432	AR_DHT_Control	chr2	47050820	47051084	-195142445	+	MER124	DNA?	DNA?	31	289	-108	1
chr2	47233204	47233205	chunk0097_136_1	11.1716	AR_DHT_Control	chr2	47233169	47233305	-194960224	-	MIRb	SINE	MIR	-137	131	7	1
chr2	47287709	47287710	chunk0097_138_1	7.36432	AR_DHT_Control	chr2	47287400	47288015	-194905514	+	L1MB3	LINE	L1	5613	6181	-2	1
chr2	47760198	47760199	chunk0097_142_1	240.97	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	47759957	47760319	-194433210	-	MER34B	LTR	ERV1	-216	349	1	1
chr2	48197268	48197269	chunk0097_148_1	8.27376	AR_DHT_Control	chr2	48197058	48197392	-193996137	-	MER115	DNA	hAT-Tip100	-8	685	311	1
chr2	48482989	48482990	chunk0097_158_1	7.36432	AR_DHT_Control	chr2	48482771	48483170	-193710359	-	L1PA11	LINE	L1	0	6174	5771	1
chr2	48733010	48733011	chunk0097_161_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	48732949	48733193	-193460336	+	UCON29	DNA	PiggyBac?	20	263	-176	1
chr2	49299360	49299361	chunk0097_163_1	12.9759	AR_DHT_Control	chr2	49298473	49304554	-192888975	+	L1PA6	LINE	L1	178	6327	0	1
chr2	49307122	49307123	chunk0097_166_1	171.4635	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	49307018	49307190	-192886339	-	L2c	LINE	L2	-15	3372	3182	1
chr2	49694860	49694861	chunk0097_169_1	13.2288	AR_DHT_Control	chr2	49694696	49694929	-192498600	-	MLT1H1	LTR	ERVL-MaLR	-301	254	6	1
chr2	49701701	49701702	chunk0097_171_1	33.92089	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	49701670	49701831	-192491698	-	L1ME3E	LINE	L1	-296	5946	5777	1
chr2	49885365	49885366	chunk0097_176_1	18.21884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	49881889	49888348	-192305181	+	L1PA7	LINE	L1	1	6467	-2	1
chr2	50079103	50079104	chunk0097_179_1	12.31365	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	50078396	50079263	-192114266	-	L1MC4a	LINE	L1	-61	7821	6901	1
chr2	50285139	50285140	chunk0097_182_1	32.7548	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	50284812	50285644	-191907885	-	MER6	DNA	TcMar-Tigger	0	865	1	1
chr2	50408056	50408057	chunk0097_187_1	87.5717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	50408045	50408149	-191785380	-	L2c	LINE	L2	-4	3383	3281	1
chr2	50597770	50597771	chunk0097_193_1	8.60486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	50597639	50597781	-191595748	+	L2b	LINE	L2	3228	3375	0	1
chr2	50643208	50643209	chunk0097_195_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	50643181	50643374	-191550155	+	MIR	SINE	MIR	14	227	-35	1
chr2	51241905	51241906	chunk0097_207_1	18.38996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	51241865	51241967	-190951562	+	L2a	LINE	L2	3309	3418	-8	1
chr2	51319806	51319807	chunk0097_212_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	51319503	51319907	-190873622	-	L1MEi	LINE	L1	-675	1537	1126	1
chr2	51380955	51380956	chunk0097_213_1	17.68633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	51380913	51381053	-190812476	-	L1ME3G	LINE	L1	-250	674	522	1
chr2	51437559	51437560	chunk0097_215_1	11.2863	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	51437509	51438342	-190755187	+	L1MC2	LINE	L1	7263	8064	0	1
chr2	51438172	51438173	chunk0097_216_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	51437509	51438342	-190755187	+	L1MC2	LINE	L1	7263	8064	0	1
chr2	51765094	51765095	chunk0097_222_1	63.3375	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	51765022	51766257	-190427272	+	L1ME1	LINE	L1	4760	6001	-178	1
chr2	53547292	53547293	chunk0097_237_1	28.451	AR_DHT_Control	chr2	53547218	53547602	-188645927	+	L2a	LINE	L2	2992	3383	-43	1
chr2	53561328	53561329	chunk0097_239_1	32.13371	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	53560679	53561784	-188631745	+	L1ME3A	LINE	L1	4933	6101	-72	1
chr2	53654907	53654908	chunk0097_247_1	11.8334	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	53654713	53655131	-188538398	+	L1M5	LINE	L1	4518	4974	-1172	1
chr2	53778223	53778224	chunk0097_250_1	26.345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	53778187	53778285	-188415244	+	MER57D	LTR	ERV1	12	115	-257	1
chr2	53938352	53938353	chunk0097_252_1	7.36432	AR_DHT_Control	chr2	53938262	53938363	-188255166	+	MIR3	SINE	MIR	92	206	-2	1
chr2	54099621	54099622	chunk0097_253_1	10.1791	AR_DHT_Control	chr2	54099147	54100031	-188093498	-	L1MA8	LINE	L1	0	6291	5412	1
chr2	54143273	54143274	chunk0097_254_1	40.4798	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	54142751	54143293	-188050236	-	L1ME3G	LINE	L1	-1584	4562	3989	1
chr2	54350324	54350325	chunk0097_259_1	7.36432	AR_DHT_Control	chr2	54350256	54350717	-187842812	-	MLT1H2	LTR	ERVL-MaLR	0	489	1	1
chr2	54840707	54840708	chunk0097_268_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	54840691	54840850	-187352679	-	L2a	LINE	L2	-1	3425	3262	1
chr2	54990340	54990341	chunk0097_278_1	59.3143	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	54990163	54990409	-187203120	+	L1MA7	LINE	L1	6018	6286	-5	1
chr2	55015587	55015588	chunk0097_281_1	14.9042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	55015486	55015703	-187177826	+	L1ME4a	LINE	L1	5257	5499	-625	1
chr2	55122924	55122925	chunk0097_284_1	34.76959	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	55122402	55123884	-187069645	+	MER45R	DNA	hAT-Tip100	1	1580	-1	1
chr2	55491099	55491100	chunk0097_292_1	18.4155	AR_DHT_Control	chr2	55491092	55491187	-186702342	-	Tigger19b	DNA	TcMar-Tigger	-14	536	441	1
chr2	55660812	55660813	chunk0097_297_1	7.36432	AR_DHT_Control	chr2	55660665	55660843	-186532686	-	MIR3	SINE	MIR	-8	200	23	1
chr2	56208589	56208590	chunk0097_311_1	37.4463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	56208491	56208672	-185984857	-	LTR89	LTR	ERVL?	-31	848	674	1
chr2	56444693	56444694	chunk0097_316_1	9.21264	AR_DHT_Control	chr2	56444626	56444910	-185748619	+	LTR88a	LTR	Gypsy?	375	656	-160	1
chr2	57161109	57161110	chunk0097_325_1	40.71845	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	57160872	57161313	-185032216	-	LTR40c	LTR	ERVL	0	465	1	1
chr2	57351892	57351893	chunk0097_329_1	6.48643	AR_DHT_Control	chr2	57351771	57351980	-184841549	+	L1P3	LINE	L1	4382	4590	-1556	1
chr2	57921909	57921910	chunk0097_336_1	53.6918	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	57921771	57922065	-184271464	-	X2_LINE	LINE	CR1	-665	743	450	1
chr2	57976739	57976740	chunk0097_337_1	36.5436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	57975756	57978094	-184215435	-	L1PA15	LINE	L1	-1	6698	4302	1
chr2	58081266	58081267	chunk0097_339_1	133.6459	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	58081059	58081401	-184112128	-	Kanga1	DNA	TcMar-Tc2	-1366	379	10	1
chr2	58104977	58104978	chunk0097_341_1	23.70084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	58102226	58105547	-184087982	+	L1P4	LINE	L1	2115	5494	-662	1
chr2	58347846	58347847	chunk0097_345_1	73.7382	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	58346376	58349099	-183844430	+	L1MA4A	LINE	L1	4616	7353	-12	1
chr2	60331221	60331222	chunk0097_357_1	34.45029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	60330859	60331909	-181861620	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1068	0	2
chr2	60347341	60347342	chunk0097_358_1	21.04814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	60346743	60347691	-181845838	+	L1ME2	LINE	L1	5152	6157	-7	2
chr2	61037543	61037544	chunk0097_371_1	17.6003	AR_DHT_Control	chr2	61035999	61040733	-181152796	+	L1PA6	LINE	L1	1373	6138	-16	2
chr2	61255677	61255678	chunk0097_376_1	17.25238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	61255665	61255908	-180937621	+	Tigger7	DNA	TcMar-Tigger	82	345	-2146	2
chr2	61367480	61367481	chunk0097_379_1	17.6003	AR_DHT_Control	chr2	61367348	61367484	-180826045	+	FRAM	SINE	Alu	1	153	-23	2
chr2	61421325	61421326	chunk0097_381_1	21.8617	AR_DHT_Control	chr2	61421240	61421380	-180772149	+	LTR50	LTR	ERVL	297	469	-326	2
chr2	61679301	61679302	chunk0097_384_1	107.863	AR_DHT_Control	chr2	61678787	61679339	-180514190	+	LTR26B	LTR	ERV1	2	531	0	2
chr2	61955485	61955486	chunk0097_388_1	45.8194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	61955444	61955639	-180237890	-	L1ME1	LINE	L1	-966	5180	4987	2
chr2	61959201	61959202	chunk0097_390_1	18.73442	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	61958776	61959214	-180234315	-	L1MC	LINE	L1	-2064	5818	5321	2
chr2	61986401	61986402	chunk0097_392_1	50.7394	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	61985349	61986561	-180206968	-	L1MA2	LINE	L1	-3958	3688	2465	2
chr2	62518958	62518959	chunk0097_407_1	9.21264	AR_DHT_Control	chr2	62515520	62521655	-179671874	-	L1PA5	LINE	L1	-1	6153	3	2
chr2	62590484	62590485	chunk0097_410_1	7.36432	AR_DHT_Control	chr2	62590451	62590810	-179602719	+	Tigger20a	DNA	TcMar-Tigger	10	400	-573	2
chr2	62820567	62820568	chunk0097_417_1	13.2288	AR_DHT_Control	chr2	62820345	62820733	-179372796	-	L1MB4	LINE	L1	-1	6179	5780	2
chr2	62857343	62857344	chunk0097_418_1	15.0924	AR_DHT_Control	chr2	62857281	62857411	-179336118	+	L2c	LINE	L2	3255	3387	0	2
chr2	62917779	62917780	chunk0097_420_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	62917741	62917839	-179275690	-	LTR40c	LTR	ERVL	-361	104	1	2
chr2	63133897	63133898	chunk0097_421_1	65.7387	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	63133796	63134056	-179059473	-	L1MB3	LINE	L1	-6311	296	7	2
chr2	63184095	63184096	chunk0097_422_1	33.924	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	63180199	63186886	-179006643	-	L1PB4	LINE	L1	-2	6857	1	2
chr2	63224344	63224345	chunk0097_424_1	32.3563	AR_DHT_Control	chr2	63224059	63225068	-178968461	+	L1MC1	LINE	L1	5313	6320	-13	2
chr2	63283455	63283456	chunk0097_426_1	43.613	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	63283422	63283638	-178909891	+	MER58A	DNA	hAT-Charlie	6	224	0	2
chr2	63610698	63610699	chunk0097_430_1	15.5336	AR_DHT_Control	chr2	63610663	63610812	-178582717	-	L1ME4b	LINE	L1	-159	733	598	2
chr2	63615331	63615332	chunk0097_431_1	15.57921	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	63615038	63615760	-178577769	+	LTR19C	LTR	ERV1	7	779	0	2
chr2	63872086	63872087	chunk0097_433_1	15.702	AR_DHT_Control	chr2	63871905	63872114	-178321415	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr2	63888337	63888338	chunk0097_434_1	19.8997	AR_DHT_Control	chr2	63888278	63888852	-178304677	-	MER6A	DNA	TcMar-Tigger	0	605	1	2
chr2	63984396	63984397	chunk0097_437_1	7.73888	AR_DHT_Control	chr2	63984330	63984563	-178208966	+	MIR	SINE	MIR	2	243	-19	2
chr2	64083357	64083358	chunk0097_438_1	7.66459	AR_DHT_Control	chr2	64083258	64083413	-178110116	+	L2c	LINE	L2	3209	3386	-1	2
chr2	64323099	64323100	chunk0097_443_1	20.51052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	64323022	64323101	-177870428	+	MIRc	SINE	MIR	120	201	-67	2
chr2	64369594	64369595	chunk0097_445_1	75.60279	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	64369249	64370245	-177823284	-	FordPrefect	DNA	hAT-Tip100	-375	1308	282	2
chr2	64449069	64449070	chunk0097_450_1	33.02804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	64449052	64449128	-177744401	+	Charlie16a	DNA	hAT-Charlie	125	200	-142	2
chr2	64516776	64516777	chunk0097_451_1	169.7786	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	64516337	64516818	-177676711	-	L1MC5a	LINE	L1	-217	2560	2051	2
chr2	64635127	64635128	chunk0097_453_1	10.1791	AR_DHT_Control	chr2	64635112	64635156	-177558373	+	(TG)n	Simple_repeat	Simple_repeat	1	44	0	2
chr2	64907061	64907062	chunk0098_1_1	31.52424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	64906841	64907138	-177286391	-	7SLRNA	srpRNA	srpRNA	0	320	1	2
chr2	64954441	64954442	chunk0098_3_1	7.36432	AR_DHT_Control	chr2	64954298	64954496	-177239033	-	L2a	LINE	L2	-1	3425	3218	2
chr2	64955152	64955153	chunk0098_4_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	64955079	64955295	-177238234	+	MIR	SINE	MIR	58	262	0	2
chr2	65103535	65103536	chunk0098_8_1	118.19117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	65103317	65103738	-177089791	-	Charlie1a	DNA	hAT-Charlie	-1074	381	7	2
chr2	65362912	65362913	chunk0098_14_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	65362893	65363259	-176830270	+	AluSp	SINE	Alu	1	303	-10	2
chr2	65396426	65396427	chunk0098_19_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	65396212	65396538	-176796991	+	L2c	LINE	L2	3026	3386	-1	2
chr2	65505620	65505621	chunk0098_25_1	8.27376	AR_DHT_Control	chr2	65505581	65505744	-176687785	-	L1MC5a	LINE	L1	-608	2169	1992	2
chr2	65577016	65577017	chunk0098_28_1	52.7648	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	65576901	65577125	-176616404	+	L2b	LINE	L2	3150	3387	0	2
chr2	66161291	66161292	chunk0098_37_1	26.72037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	66160698	66164138	-176029391	+	L1MEf	LINE	L1	891	4387	-1759	2
chr2	66472487	66472488	chunk0098_45_1	74.6891	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	66472424	66472517	-175721012	-	L2c	LINE	L2	-10	3377	3290	2
chr2	66538409	66538410	chunk0098_51_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	66538193	66538421	-175655108	+	MIR	SINE	MIR	2	257	-5	2
chr2	66595759	66595760	chunk0098_54_1	24.697	AR_DHT_Control	chr2	66595392	66596240	-175597289	-	L1MC4	LINE	L1	-174	7868	6926	2
chr2	66850967	66850968	chunk0098_62_1	13.28074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	66850946	66850981	-175342548	+	(TTTGTG)n	Simple_repeat	Simple_repeat	1	35	0	2
chr2	66972143	66972144	chunk0098_68_1	33.4098	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	66971963	66972737	-175220792	+	L1M5	LINE	L1	4342	5165	-981	2
chr2	67296834	67296835	chunk0098_74_1	6.48643	AR_DHT_Control	chr2	67296780	67296928	-174896601	-	L2b	LINE	L2	0	3375	3211	2
chr2	67477619	67477620	chunk0098_82_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	67477545	67477646	-174715883	+	MER131	DNA?	DNA?	35	141	-74	2
chr2	67812695	67812696	chunk0098_94_1	19.2232	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	67808951	67813348	-174380181	+	L1PB1	LINE	L1	255	6507	-360	2
chr2	68018885	68018886	chunk0098_103_1	61.2174	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	68018869	68019043	-174174486	-	MLT1B	LTR	ERVL-MaLR	0	390	204	2
chr2	68288391	68288392	chunk0098_108_1	34.55154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	68288267	68288465	-173905064	-	L2b	LINE	L2	-200	3175	2968	2
chr2	68407187	68407188	chunk0098_111_1	41.5219	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	68404900	68411339	-173782190	+	L1PA7	LINE	L1	2	6469	0	2
chr2	68575213	68575214	chunk0098_119_1	8.27376	AR_DHT_Control	chr2	68574925	68576064	-173617465	-	L2a	LINE	L2	0	3426	2141	2
chr2	69065796	69065797	chunk0098_129_1	10.1791	AR_DHT_Control	chr2	69065693	69065979	-173127550	-	MamGypsy2-I	LTR	Gypsy	-1548	2618	2289	2
chr2	69286567	69286568	chunk0098_133_1	24.697	AR_DHT_Control	chr2	69286491	69286705	-172906824	+	L1ME3F	LINE	L1	5615	5894	-349	2
chr2	69650396	69650397	chunk0098_141_1	8.27376	AR_DHT_Control	chr2	69650364	69650461	-172543068	-	L2a	LINE	L2	-4	3422	3312	2
chr2	69989326	69989327	chunk0098_155_1	35.8543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	69989232	69989428	-172204101	+	MIRc	SINE	MIR	6	237	-31	2
chr2	70038267	70038268	chunk0098_156_1	78.186	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	70038264	70038599	-172154930	+	AluJr4	SINE	Alu	1	297	-15	2
chr2	70603294	70603295	chunk0098_165_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	70601932	70604263	-171589266	-	L1MD1	LINE	L1	-2794	3743	1300	2
chr2	70693116	70693117	chunk0098_168_1	26.66239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	70693058	70693347	-171500182	+	MER90	LTR	ERV1	248	549	-26	2
chr2	70993469	70993470	chunk0098_171_1	28.0788	AR_DHT_Control	chr2	70993434	70993593	-171199936	-	L2	LINE	L2	-2842	577	423	2
chr2	71181578	71181579	chunk0098_175_1	87.8177	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	71181548	71181614	-171011915	-	L2a	LINE	L2	-3	3423	3357	2
chr2	71241581	71241582	chunk0098_178_1	7.36432	AR_DHT_Control	chr2	71241501	71241623	-170951906	+	MamTip3	DNA	hAT-Tip100	371	499	-1	2
chr2	71764694	71764695	chunk0098_187_1	22.2669	AR_DHT_Control	chr2	71764499	71765575	-170427954	+	L1MC4	LINE	L1	6688	7903	-139	2
chr2	71772957	71772958	chunk0098_188_1	21.0751	AR_DHT_Control	chr2	71771891	71773045	-170420484	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	2
chr2	72718996	72718997	chunk0098_206_1	45.9028	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	72718926	72719694	-169473835	+	L1M4a2	LINE	L1	3	801	-1855	2
chr2	72915091	72915092	chunk0098_208_1	19.3171	AR_DHT_Control	chr2	72915041	72915105	-169278424	+	MIR	SINE	MIR	85	155	-107	2
chr2	72975999	72976000	chunk0098_209_1	9.21264	AR_DHT_Control	chr2	72975900	72976083	-169217446	+	L1ME3Cz	LINE	L1	405	673	-251	2
chr2	73090442	73090443	chunk0098_214_1	8.18895	AR_DHT_Control	chr2	73090334	73091072	-169102457	+	L1MC2	LINE	L1	5580	6344	0	2
chr2	73546475	73546476	chunk0098_216_1	69.787	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	73546397	73546816	-168646713	-	L2c	LINE	L2	0	3426	2978	2
chr2	73650085	73650086	chunk0098_219_1	10.1791	AR_DHT_Control	chr2	73650025	73650445	-168543084	+	L1ME4a	LINE	L1	5602	6040	-84	2
chr2	73713103	73713104	chunk0098_220_1	12.1886	AR_DHT_Control	chr2	73713021	73713441	-168480088	+	L1ME4a	LINE	L1	5602	6040	-84	2
chr2	73739193	73739194	chunk0098_224_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	73739123	73739389	-168454140	-	MER70-int	LTR	ERVL	0	5023	4753	2
chr2	73853819	73853820	chunk0098_226_1	66.6145	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	73853736	73853829	-168339700	-	L1ME3B	LINE	L1	-56	6186	6093	2
chr2	73874478	73874479	chunk0098_227_1	76.5123	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	73874217	73874935	-168318594	-	L4_A_Mam	LINE	RTE-X	-1633	3357	2654	2
chr2	74044611	74044612	chunk0098_232_1	9.21264	AR_DHT_Control	chr2	74044501	74044774	-168148755	-	Tigger5	DNA	TcMar-Tigger	-2096	310	1	2
chr2	74089241	74089242	chunk0098_233_1	10.1791	AR_DHT_Control	chr2	74089104	74089432	-168104097	-	L1ME1	LINE	L1	-123	6056	5727	2
chr2	74109822	74109823	chunk0098_234_1	9.21264	AR_DHT_Control	chr2	74109635	74109900	-168083629	-	L3	LINE	CR1	-353	3746	3482	2
chr2	74486411	74486412	chunk0098_235_1	7.91804	AR_DHT_Control	chr2	74486388	74486610	-167706919	-	L2a	LINE	L2	-35	3391	3167	2
chr2	74487114	74487115	chunk0098_236_1	6.48643	AR_DHT_Control	chr2	74486908	74487141	-167706388	-	L2a	LINE	L2	-260	3166	2912	2
chr2	74614346	74614347	chunk0098_239_1	5.6425	AR_DHT_Control	chr2	74614076	74614373	-167579156	-	L1MCa	LINE	L1	-6165	343	1	2
chr2	75028764	75028765	chunk0098_249_1	27.0742	AR_DHT_Control	chr2	75028425	75028830	-167164699	-	L2a	LINE	L2	0	3426	3019	2
chr2	75035764	75035765	chunk0098_251_1	120.0755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	75035708	75035830	-167157699	+	MIR	SINE	MIR	138	261	-1	2
chr2	75037978	75037979	chunk0098_253_1	8.15943	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75037783	75038013	-167155516	+	L4_C_Mam	LINE	RTE-X	3199	3432	-1706	2
chr2	75062930	75062931	chunk0098_255_1	4.67225	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75062889	75063228	-167130301	-	THE1B	LTR	ERVL-MaLR	0	364	1	2
chr2	75153493	75153494	chunk0098_257_1	18.21505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75153491	75153535	-167039994	+	THE1-int	LTR	ERVL-MaLR	406	449	-1131	2
chr2	75202708	75202709	chunk0098_258_1	7.42302	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75202646	75202899	-166990630	-	L1ME3G	LINE	L1	-285	639	365	2
chr2	75268272	75268273	chunk0098_260_1	52.0124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	75268199	75268279	-166925250	-	L1MA3	LINE	L1	-7470	95	20	2
chr2	75300331	75300332	chunk0098_262_1	13.89693	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75300291	75300419	-166893110	-	L2a	LINE	L2	-1	3425	3283	2
chr2	75362467	75362468	chunk0098_269_1	16.73953	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75362438	75362635	-166830894	+	ERVL-E-int	LTR	ERVL	2042	2299	-3368	2
chr2	75381069	75381070	chunk0098_270_1	8.27376	AR_DHT_Control	chr2	75380544	75381349	-166812180	+	LTR27C	LTR	ERV1	1	767	0	2
chr2	75493449	75493450	chunk0098_275_1	26.99683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	75493440	75493478	-166700051	+	(TCGCTG)n	Simple_repeat	Simple_repeat	1	42	0	2
chr2	75583097	75583098	chunk0098_278_1	16.7884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75581332	75586667	-166606862	+	L1MA3	LINE	L1	2352	7724	0	2
chr2	75680440	75680441	chunk0098_280_1	11.2084	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75680402	75681120	-166512409	+	L2	LINE	L2	1106	1822	-1597	2
chr2	75709476	75709477	chunk0098_281_1	45.9222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	75709411	75709824	-166483705	+	L1MA8	LINE	L1	5851	6280	-11	2
chr2	75807817	75807818	chunk0098_288_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	75807598	75808155	-166385374	-	L2b	LINE	L2	0	3375	2735	2
chr2	75809291	75809292	chunk0098_289_1	11.1716	AR_DHT_Control	chr2	75809142	75809340	-166384189	-	MIR	SINE	MIR	-42	220	6	2
chr2	75882758	75882759	chunk0098_290_1	14.2738	AR_DHT_Control	chr2	75882476	75882866	-166310663	-	L1ME1	LINE	L1	-82	6097	5679	2
chr2	75890177	75890178	chunk0098_291_1	5.6425	AR_DHT_Control	chr2	75890152	75890364	-166303165	-	L2c	LINE	L2	0	3426	3184	2
chr2	76007570	76007571	chunk0098_294_1	6.80366	AR_DHT_Control	chr2	76007561	76007718	-166185811	-	L1M5	LINE	L1	-3316	2830	2683	2
chr2	76008105	76008106	chunk0098_295_1	20.5155	AR_DHT_Control	chr2	76007871	76008515	-166185014	+	LTR9	LTR	ERV1	1	612	0	2
chr2	76239358	76239359	chunk0098_300_1	4.6472	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	76239261	76239554	-165953975	-	L1M5	LINE	L1	-2654	3492	3182	2
chr2	76256932	76256933	chunk0098_302_1	68.6727	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	76256593	76257160	-165936369	-	MER70B	LTR	ERVL	-8	570	1	2
chr2	76429174	76429175	chunk0098_310_1	13.8104	AR_DHT_Control	chr2	76429174	76429193	-165764336	+	(AG)n	Simple_repeat	Simple_repeat	1	19	0	2
chr2	76451865	76451866	chunk0098_311_1	5.77762	AR_DHT_Control	chr2	76450497	76453030	-165740499	+	L1ME1	LINE	L1	3504	6136	-43	2
chr2	76655481	76655482	chunk0098_315_1	51.3814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	76654125	76660206	-165533323	-	L1MC1	LINE	L1	-144	6364	7	2
chr2	76656640	76656641	chunk0098_317_1	6.17841	AR_DHT_Control	chr2	76654125	76660206	-165533323	-	L1MC1	LINE	L1	-144	6364	7	2
chr2	76680611	76680612	chunk0098_319_1	49.0368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	76680563	76680961	-165512568	+	LTR16A1	LTR	ERVL	1	486	-9	2
chr2	76944412	76944413	chunk0098_332_1	6.48643	AR_DHT_Control	chr2	76944094	76944530	-165248999	+	L2c	LINE	L2	2910	3387	0	2
chr2	77191811	77191812	chunk0098_339_1	43.9589	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	77191760	77191829	-165001700	-	L1PA10	LINE	L1	-3	6165	6099	2
chr2	77238617	77238618	chunk0098_342_1	226.1864	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	77238607	77240268	-164953261	+	L1MB3	LINE	L1	2006	3768	-3173	2
chr2	77349198	77349199	chunk0098_350_1	6.7814	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	77348901	77349478	-164844051	+	L1ME4c	LINE	L1	3913	4534	-1612	2
chr2	77375426	77375427	chunk0098_351_1	8.27376	AR_DHT_Control	chr2	77375267	77375870	-164817659	-	L1MA10	LINE	L1	-14	6320	5719	2
chr2	77464898	77464899	chunk0098_357_1	15.56647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	77464734	77464906	-164728623	+	MER5A	DNA	hAT-Charlie	4	184	-5	2
chr2	77664780	77664781	chunk0098_360_1	28.5845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	77664764	77665078	-164528451	+	ERVL-E-int	LTR	ERVL	360	684	-4983	2
chr2	77690832	77690833	chunk0098_361_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	77690494	77690944	-164502585	-	L1MEc	LINE	L1	-4158	2242	1770	2
chr2	77832317	77832318	chunk0098_362_1	6.33484	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	77831567	77833429	-164360100	+	MER50-int	LTR	ERV1	7	1850	-5355	2
chr2	78302403	78302404	chunk0098_367_1	11.8204	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	78302371	78302615	-163890914	-	L1MC	LINE	L1	-2070	5812	5568	2
chr2	78568319	78568320	chunk0098_373_1	25.17665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	78568225	78568532	-163624997	-	MLT1G	LTR	ERVL-MaLR	-299	292	1	2
chr2	78925632	78925633	chunk0098_374_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	78925445	78925666	-163267863	+	MIRc	SINE	MIR	34	265	-3	2
chr2	79171888	79171889	chunk0098_380_1	30.66112	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79171794	79172954	-163020575	+	L1MA4	LINE	L1	5133	6294	-6	2
chr2	79471956	79471957	chunk0098_386_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79471904	79473275	-162720254	-	MLT1A0-int	LTR	ERVL-MaLR	-7	1364	46	2
chr2	79523489	79523490	chunk0098_390_1	61.7884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	79523314	79523974	-162669555	-	L1ME3G	LINE	L1	-226	698	76	2
chr2	79684547	79684548	chunk0098_393_1	6.67113	AR_DHT_Control	chr2	79684506	79684578	-162508951	+	MIRb	SINE	MIR	194	261	-1	2
chr2	79741637	79741638	chunk0098_395_1	42.9613	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79741436	79741886	-162451643	-	L1M5	LINE	L1	-1567	4579	4103	2
chr2	79792206	79792207	chunk0098_400_1	244.91696	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	79792170	79792436	-162401093	+	LTR40b	LTR	ERVL	1	269	-193	2
chr2	79850701	79850702	chunk0098_404_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79850613	79850859	-162342670	+	MIR	SINE	MIR	18	262	0	2
chr2	79873870	79873871	chunk0098_405_1	6.48643	AR_DHT_Control	chr2	79873616	79873922	-162319607	+	AluJr	SINE	Alu	1	301	-11	2
chr2	79890721	79890722	chunk0098_406_1	26.6839	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	79890715	79891074	-162302455	-	MLT1A0	LTR	ERVL-MaLR	0	365	3	2
chr2	79966902	79966903	chunk0098_409_1	18.8646	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	79966670	79967568	-162225961	+	L2	LINE	L2	1956	2849	-570	2
chr2	79985058	79985059	chunk0098_412_1	132.8128	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	79984887	79985087	-162208442	+	MER58A	DNA	hAT-Charlie	2	222	-2	2
chr2	81097446	81097447	chunk0098_425_1	7.80475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	81097128	81097754	-161095775	-	L1ME1	LINE	L1	-135	6217	5608	2
chr2	81559408	81559409	chunk0098_427_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	81559300	81560111	-160633418	+	L1MC1	LINE	L1	5660	6499	-9	2
chr2	81584505	81584506	chunk0098_428_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	81584422	81584552	-160608977	+	MIR	SINE	MIR	81	216	-46	2
chr2	81868499	81868500	chunk0098_432_1	6.48643	AR_DHT_Control	chr2	81868209	81868780	-160324749	+	LTR10C	LTR	ERV1	4	591	0	2
chr2	81896018	81896019	chunk0098_437_1	10.6202	AR_DHT_Control	chr2	81895935	81896439	-160297090	+	PABL_B	LTR	ERV1	1	638	-29	2
chr2	82093133	82093134	chunk0098_438_1	33.4561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	82092934	82093266	-160100263	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	2
chr2	82110069	82110070	chunk0098_439_1	41.3805	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	82109941	82110941	-160082588	+	MER110-int	LTR	ERV1	2932	3908	-739	2
chr2	82120446	82120447	chunk0098_441_1	7.36432	AR_DHT_Control	chr2	82120252	82120568	-160072961	-	L2a	LINE	L2	-333	3093	2732	2
chr2	82140073	82140074	chunk0098_443_1	20.2855	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	82140039	82140174	-160053355	+	PABL_A	LTR	ERV1	1	136	-524	2
chr2	82275665	82275666	chunk0098_449_1	15.13681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	82275203	82276474	-159917055	-	L1PREC2	LINE	L1	-3546	4595	3327	2
chr2	82320327	82320328	chunk0098_450_1	153.6715	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	82320201	82320591	-159872938	-	MLT1D	LTR	ERVL-MaLR	-59	446	27	2
chr2	82453072	82453073	chunk0098_455_1	23.4743	AR_DHT_Control	chr2	82452753	82453559	-159739970	-	L1PA8A	LINE	L1	0	6131	5330	2
chr2	82487567	82487568	chunk0098_457_1	73.5153	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	82487340	82487672	-159705857	+	MER57D	LTR	ERV1	117	411	0	2
chr2	82732017	82732018	chunk0099_9_1	40.9585	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	82731848	82732060	-159461469	+	LTR33	LTR	ERVL	1	216	-299	2
chr2	82795960	82795961	chunk0099_11_1	3.80972	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	82795871	82796009	-159397520	-	L3	LINE	CR1	-178	3921	3778	2
chr2	82797686	82797687	chunk0099_12_1	10.1791	AR_DHT_Control	chr2	82797340	82797800	-159395729	-	MER101B	LTR	ERV1	-51	519	71	2
chr2	82873797	82873798	chunk0099_15_1	26.108	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	82870982	82875166	-159318363	-	L1PBa	LINE	L1	-465	6405	1931	2
chr2	82912773	82912774	chunk0099_17_1	15.66837	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	82912691	82914302	-159279227	+	L1M1	LINE	L1	4095	5651	-654	2
chr2	82920040	82920041	chunk0099_18_1	5.6425	AR_DHT_Control	chr2	82919995	82920350	-159273179	-	MLT1A0	LTR	ERVL-MaLR	-4	361	2	2
chr2	83079195	83079196	chunk0099_21_1	17.26531	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	83078188	83079306	-159114223	-	L1PA15	LINE	L1	-2	6163	5052	2
chr2	83121859	83121860	chunk0099_24_1	5.73469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	83121703	83122169	-159071360	+	L1MD2	LINE	L1	5583	6076	-283	2
chr2	83152185	83152186	chunk0099_25_1	25.5852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	83152100	83152224	-159041305	-	MIRb	SINE	MIR	-30	238	116	2
chr2	83370082	83370083	chunk0099_28_1	7.09019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	83369895	83370158	-158823371	-	LTR37B	LTR	ERV1	-227	241	6	2
chr2	83380377	83380378	chunk0099_29_1	42.8818	AR_DHT_Control	chr2	83380143	83381784	-158811745	+	MSTA-int	LTR	ERVL-MaLR	1	1630	-1	2
chr2	83578651	83578652	chunk0099_30_1	8.36569	AR_DHT_Control	chr2	83578630	83578733	-158614796	-	MIRc	SINE	MIR	-160	108	2	2
chr2	83607387	83607388	chunk0099_31_1	54.8657	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	83604000	83608484	-158585045	+	L1PB4	LINE	L1	2149	6676	-183	2
chr2	83832221	83832222	chunk0099_39_1	11.58034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	83832139	83833313	-158360216	-	L1MA8	LINE	L1	-4	6287	5107	2
chr2	83894233	83894234	chunk0099_42_1	125.1952	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	83894035	83894241	-158299288	-	MIR	SINE	MIR	-61	201	3	2
chr2	84503033	84503034	chunk0099_51_1	4.19197	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	84500000	84504703	-157688826	-	L1M1	LINE	L1	-964	6601	1826	2
chr2	84643924	84643925	chunk0099_58_1	24.29481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	84642590	84644404	-157549125	-	L1MCa	LINE	L1	-4349	2159	397	2
chr2	85091979	85091980	chunk0099_69_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85091949	85092311	-157101218	+	Helitron3Na_Mam	RC	Helitron	86	445	-41	2
chr2	85382517	85382518	chunk0099_81_1	23.5294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85382452	85382521	-156811008	-	MER4-int	LTR	ERV1	-2515	4083	4018	2
chr2	85421589	85421590	chunk0099_86_1	109.8708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	85421519	85421872	-156771657	-	L2b	LINE	L2	-11	3364	2987	2
chr2	85482560	85482561	chunk0099_88_1	10.1791	AR_DHT_Control	chr2	85482277	85482570	-156710959	+	AluSc8	SINE	Alu	1	299	-12	2
chr2	85498286	85498287	chunk0099_89_1	40.4443	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85498207	85498377	-156695152	+	MER57A-int	LTR	ERV1	6015	6187	0	2
chr2	85514482	85514483	chunk0099_90_1	5.82105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85514452	85514549	-156678980	-	X6B_LINE	LINE	CR1	-775	297	205	2
chr2	85549282	85549283	chunk0099_99_1	138.3278	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85549150	85549285	-156644244	+	MIRb	SINE	MIR	20	166	-102	2
chr2	85708848	85708849	chunk0099_105_1	477.441	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85708593	85709272	-156484257	+	L1MC4a	LINE	L1	7179	7880	-2	2
chr2	85725745	85725746	chunk0099_108_1	15.87326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	85725575	85725756	-156467773	+	HAL1	LINE	L1	793	968	-1539	2
chr2	85907827	85907828	chunk0099_111_1	10.83245	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85907742	85907839	-156285690	-	HAL1	LINE	L1	-2270	237	129	2
chr2	85921516	85921517	chunk0099_114_1	119.3345	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	85921516	85922139	-156271390	+	MER61F	LTR	ERV1	1	676	0	2
chr2	86103041	86103042	chunk0099_127_1	5.69226	AR_DHT_Control	chr2	86102978	86103463	-156090066	-	L2a	LINE	L2	0	3426	2848	2
chr2	86191402	86191403	chunk0099_129_1	9.70003	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	86191363	86191622	-156001907	+	MLT2C2	LTR	ERVL	133	412	-52	2
chr2	86302531	86302532	chunk0099_133_1	14.89555	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	86302406	86302630	-155890899	+	L1ME4a	LINE	L1	5528	5765	-359	2
chr2	86471015	86471016	chunk0099_134_1	68.6163	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	86470884	86471205	-155722324	-	L1MC5	LINE	L1	-443	5681	5450	2
chr2	86513060	86513061	chunk0099_138_1	8.08101	AR_DHT_Control	chr2	86512564	86513682	-155679847	+	L1MC1	LINE	L1	5180	6333	0	2
chr2	86675329	86675330	chunk0099_147_1	66.8761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	86675238	86675333	-155518196	+	LFSINE_Vert	SINE	tRNA	364	457	-2	2
chr2	86695045	86695046	chunk0099_148_1	4.71246	AR_DHT_Control	chr2	86695006	86695595	-155497934	+	LTR10A	LTR	ERV1	1	626	-7	2
chr2	86703842	86703843	chunk0099_149_1	70.3826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	86703756	86704170	-155489359	+	LTR3B	LTR	ERVK	1	433	-4	2
chr2	86803233	86803234	chunk0099_152_1	40.7727	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	86803159	86803243	-155390286	+	L1M3	LINE	L1	5698	5781	-402	2
chr2	87136338	87136339	chunk0099_153_1	11.1716	AR_DHT_Control	chr2	87136254	87136475	-155057054	+	L1ME1	LINE	L1	5481	5704	-475	2
chr2	87745585	87745586	chunk0099_156_1	10.1791	AR_DHT_Control	chr2	87745017	87746037	-154447492	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	1068	0	2
chr2	88198197	88198198	chunk0099_158_1	11.1716	AR_DHT_Control	chr2	88198142	88198261	-153995268	+	MIRc	SINE	MIR	19	144	-124	2
chr2	88209750	88209751	chunk0099_159_1	9.21264	AR_DHT_Control	chr2	88209438	88209799	-153983730	-	L3	LINE	CR1	-7	4092	3717	2
chr2	88407066	88407067	chunk0099_161_1	6.48643	AR_DHT_Control	chr2	88406895	88407094	-153786435	+	ERVL-E-int	LTR	ERVL	4400	4600	-1067	2
chr2	88425713	88425714	chunk0099_162_1	26.7858	AR_DHT_Control	chr2	88425086	88426057	-153767472	+	L1MEd	LINE	L1	576	1615	-5471	2
chr2	88614155	88614156	chunk0099_167_1	8.27376	AR_DHT_Control	chr2	88613982	88615337	-153578192	+	L2a	LINE	L2	167	1773	-1646	2
chr2	89821782	89821783	chunk0099_175_1	14.184	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	89811300	89833976	-152359553	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	23074	0	2
chr2	89828615	89828616	chunk0099_177_1	37.79398	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr2	89811300	89833976	-152359553	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	23074	0	2
chr2	89833779	89833780	chunk0099_179_1	15.413	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	89811300	89833976	-152359553	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	23074	0	2
chr2	90309363	90309364	chunk0099_180_1	13.2288	AR_DHT_Control	chr2	90309359	90309658	-151883871	-	AluSp	SINE	Alu	-12	301	1	2
chr2	94209182	94209183	chunk0099_199_1	12.1886	AR_DHT_Control	chr2	94209043	94209524	-147984005	+	REP522	Satellite	telo	1297	1817	0	2
chr2	94979841	94979842	chunk0099_209_1	6.3126	AR_DHT_Control	chr2	94979835	94979980	-147213549	-	L2b	LINE	L2	-5	3421	3240	2
chr2	94994948	94994949	chunk0099_210_1	9.45481	AR_DHT_Control	chr2	94994760	94995294	-147198235	+	(TG)n	Simple_repeat	Simple_repeat	1	538	0	2
chr2	96094804	96094805	chunk0099_220_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	96094119	96094964	-146098565	+	L1MB5	LINE	L1	4787	5620	-554	2
chr2	96162507	96162508	chunk0099_222_1	114.2802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	96162050	96162577	-146030952	+	L1ME3G	LINE	L1	32	674	-250	2
chr2	96338272	96338273	chunk0099_228_1	39.75221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	96338223	96338446	-145855083	+	L2	LINE	L2	1492	1744	-1675	2
chr2	96357116	96357117	chunk0099_229_1	28.9988	AR_DHT_Control	chr2	96357029	96357148	-145836381	-	MamSINE1	SINE	tRNA-RTE	-111	179	60	2
chr2	96432202	96432203	chunk0099_232_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	96432097	96432258	-145761271	+	MER4-int	LTR	ERV1	4393	4525	-355	2
chr2	96680725	96680726	chunk0099_236_1	39.0463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	96680666	96680821	-145512708	-	L1ME3A	LINE	L1	-3	6170	6011	2
chr2	97782227	97782228	chunk0099_246_1	13.46503	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	97781607	97785122	-144408407	+	L1MD1	LINE	L1	15	3886	-2651	2
chr2	97849377	97849378	chunk0099_250_1	6.5005	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	97848704	97849519	-144344010	+	L1MC3	LINE	L1	5829	6744	-1836	2
chr2	97858918	97858919	chunk0099_251_1	4.83532	AR_DHT_Control	chr2	97858518	97859014	-144334515	+	MLT1E3	LTR	ERVL-MaLR	117	624	0	2
chr2	97935151	97935152	chunk0099_254_1	40.107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	97933653	97935245	-144258284	+	L1MDb	LINE	L1	3999	5698	-728	2
chr2	97936342	97936343	chunk0099_256_1	11.4	AR_DHT_Control	chr2	97935676	97936999	-144256530	+	L1M4	LINE	L1	2	1364	-6153	2
chr2	98052035	98052036	chunk0099_260_1	8.67324	AR_DHT_Control	chr2	98051528	98052308	-144141221	+	MER41-int	LTR	ERV1	4379	5139	-807	2
chr2	98084990	98084991	chunk0099_266_1	49.24789	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	98084801	98085013	-144108516	+	Tigger16a	DNA	TcMar-Tigger	285	522	-435	2
chr2	98108205	98108206	chunk0099_267_1	92.9934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	98106214	98108980	-144084549	-	L1MDa	LINE	L1	-1320	5217	2395	2
chr2	98216797	98216798	chunk0099_270_1	25.08388	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	98216758	98216928	-143976601	-	MIRb	SINE	MIR	-66	202	17	2
chr2	98275047	98275048	chunk0099_274_1	55.7753	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	98274988	98275221	-143918308	+	L2a	LINE	L2	3178	3425	-1	2
chr2	98307515	98307516	chunk0099_278_1	31.4573	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	98307126	98307717	-143885812	-	LTR10C	LTR	ERV1	0	591	1	2
chr2	98340124	98340125	chunk0099_280_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	98339851	98340251	-143853278	-	LTR41B	LTR	ERVL	-319	439	3	2
chr2	98598999	98599000	chunk0099_283_1	14.41592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	98598883	98599374	-143594155	+	L1MB8	LINE	L1	5608	6177	-7	2
chr2	98630266	98630267	chunk0099_285_1	10.6593	AR_DHT_Control	chr2	98630244	98630586	-143562943	+	L1ME3E	LINE	L1	5801	6171	-71	2
chr2	98699310	98699311	chunk0099_286_1	16.3197	AR_DHT_Control	chr2	98698989	98699485	-143494044	-	MER68	LTR	ERVL	-2	561	1	2
chr2	98714743	98714744	chunk0099_288_1	6.48643	AR_DHT_Control	chr2	98714735	98714853	-143478676	+	L1MB5	LINE	L1	6048	6174	0	2
chr2	98780059	98780060	chunk0099_291_1	12.9925	AR_DHT_Control	chr2	98779866	98780211	-143413318	+	LTR47A2	LTR	ERVL	1	341	-91	2
chr2	98968761	98968762	chunk0099_299_1	4.06817	AR_DHT_Control	chr2	98968602	98969026	-143224503	+	MER57A1	LTR	ERV1	1	428	-4	2
chr2	99160876	99160877	chunk0099_306_1	33.5988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	99160798	99160982	-143032547	+	L1ME4a	LINE	L1	5643	5847	-277	2
chr2	99349682	99349683	chunk0099_308_1	33.9985	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99349676	99350890	-142842639	-	L1MA6	LINE	L1	-12	6288	4964	2
chr2	99421030	99421031	chunk0099_311_1	28.06372	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	99420728	99421117	-142772412	-	L2	LINE	L2	-2788	631	224	2
chr2	99697711	99697712	chunk0099_320_1	29.8756	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99697694	99697744	-142495785	+	MIR3	SINE	MIR	30	79	-129	2
chr2	99800874	99800875	chunk0099_321_1	10.186	AR_DHT_Control	chr2	99799479	99801006	-142392523	+	L1ME1	LINE	L1	4674	6234	-118	2
chr2	99861737	99861738	chunk0099_324_1	28.1413	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99861633	99861888	-142331641	-	L1ME3E	LINE	L1	-6	6236	5964	2
chr2	99865074	99865075	chunk0099_326_1	105.5284	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99864002	99865449	-142328080	+	MamRTE1	LINE	RTE-BovB	2196	3745	-67	2
chr2	99873561	99873562	chunk0099_328_1	32.20461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	99873492	99873637	-142319892	+	MIRb	SINE	MIR	89	233	-29	2
chr2	100000539	100000540	chunk0099_333_1	24.6436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	100000504	100000546	-142192983	+	(CA)n	Simple_repeat	Simple_repeat	1	42	0	2
chr2	100055746	100055747	chunk0099_334_1	5.9729	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	100055630	100055831	-142137698	-	MER58A	DNA	hAT-Charlie	0	224	26	2
chr2	100056629	100056630	chunk0099_335_1	9.20019	AR_DHT_Control	chr2	100056578	100056764	-142136765	-	L3	LINE	CR1	-1563	2536	2346	2
chr2	100116445	100116446	chunk0099_344_1	40.0439	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	100115916	100118161	-142075368	-	L1MEg	LINE	L1	-3579	2567	253	2
chr2	100121515	100121516	chunk0099_346_1	41.15432	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	100121510	100121555	-142071974	+	L2b	LINE	L2	3329	3375	0	2
chr2	100230911	100230912	chunk0099_350_1	10.5201	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	100230758	100231138	-141962391	+	L2a	LINE	L2	2250	2696	-723	2
chr2	100415810	100415811	chunk0099_356_1	6.0927	AR_DHT_Control	chr2	100415743	100416101	-141777428	-	Tigger3a	DNA	TcMar-Tigger	0	348	4	2
chr2	100754886	100754887	chunk0099_357_1	7.14789	AR_DHT_Control	chr2	100754810	100754972	-141438557	-	MLT1L	LTR	ERVL-MaLR	-14	596	419	2
chr2	100755611	100755612	chunk0099_359_1	102.5565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	100755599	100755748	-141437781	-	L2c	LINE	L2	-7	3380	3242	2
chr2	100835226	100835227	chunk0099_364_1	9.66837	AR_DHT_Control	chr2	100835116	100835237	-141358292	-	MIR	SINE	MIR	-59	203	77	2
chr2	100998327	100998328	chunk0099_368_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	100998272	100998357	-141195172	+	MER121	DNA	hAT?	117	204	-197	2
chr2	101096896	101096897	chunk0099_372_1	103.92803	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	101096223	101097583	-141095946	+	L1MC3	LINE	L1	749	2298	-4362	2
chr2	101816291	101816292	chunk0099_390_1	59.1251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	101815460	101816300	-140377229	-	L1MEc	LINE	L1	-5468	932	21	2
chr2	101822329	101822330	chunk0099_392_1	16.29853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	101821288	101822389	-140371140	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	2
chr2	102032558	102032559	chunk0099_403_1	7.5995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	102032554	102032660	-140160869	+	L1ME3F	LINE	L1	6071	6180	-14	2
chr2	102120792	102120793	chunk0099_407_1	186.9048	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	102120703	102120880	-140072649	+	L2a	LINE	L2	3243	3426	0	2
chr2	102131753	102131754	chunk0099_408_1	29.47936	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	102131018	102132447	-140061082	+	L1MEc	LINE	L1	450	2083	-4332	2
chr2	102161563	102161564	chunk0099_410_1	10.8017	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	102160973	102161711	-140031818	-	L1MEc	LINE	L1	-3023	3296	2592	2
chr2	102630215	102630216	chunk0099_425_1	17.37022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	102630123	102631093	-139562436	-	L1MEd	LINE	L1	-5342	1761	602	2
chr2	102767479	102767480	chunk0099_428_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	102767445	102767519	-139426010	-	Tigger15a	DNA	TcMar-Tigger	0	715	642	2
chr2	102965990	102965991	chunk0099_435_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	102965958	102966431	-139227098	-	MLT1F	LTR	ERVL-MaLR	-35	513	1	2
chr2	103213275	103213276	chunk0099_442_1	15.6143	AR_DHT_Control	chr2	103213263	103213471	-138980058	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr2	103349271	103349272	chunk0099_445_1	6.48643	AR_DHT_Control	chr2	103349238	103349456	-138844073	-	L1MD2	LINE	L1	-13	6346	6076	2
chr2	103387085	103387086	chunk0099_446_1	69.3084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	103386946	103387186	-138806343	+	Tigger3a	DNA	TcMar-Tigger	88	288	-60	2
chr2	103476256	103476257	chunk0099_448_1	8.27376	AR_DHT_Control	chr2	103476245	103476331	-138717198	-	PABL_A-int	LTR	ERV1	-526	4489	4398	2
chr2	103656764	103656765	chunk0100_1_1	9.76623	AR_DHT_Control	chr2	103656737	103656896	-138536633	-	L2c	LINE	L2	-5	3382	3197	2
chr2	105005704	105005705	chunk0100_11_1	19.24465	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	105005609	105005813	-137187716	-	MER58A	DNA	hAT-Charlie	-10	214	2	2
chr2	105296164	105296165	chunk0100_28_1	8.57499	AR_DHT_Control	chr2	105296118	105296292	-136897237	+	MIRb	SINE	MIR	59	260	-8	2
chr2	105304193	105304194	chunk0100_31_1	16.87839	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	105303618	105304372	-136889157	+	L1MC5	LINE	L1	8521	9295	-9	2
chr2	105316156	105316157	chunk0100_33_1	162.081	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	105315424	105316349	-136877180	+	L1ME2	LINE	L1	5197	6164	0	2
chr2	105730357	105730358	chunk0100_45_1	7.47918	AR_DHT_Control	chr2	105730142	105730658	-136462871	-	LTR40a	LTR	ERVL	-2	517	1	2
chr2	106010267	106010268	chunk0100_47_1	72.6449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106010218	106010357	-136183172	-	L1MB8	LINE	L1	-2440	312	177	2
chr2	106277562	106277563	chunk0100_57_1	20.5302	AR_DHT_Control	chr2	106277446	106277687	-135915842	-	LTR48B	LTR	ERV1	-182	462	243	2
chr2	106327362	106327363	chunk0100_59_1	29.8214	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106326654	106327531	-135865998	+	L1ME4b	LINE	L1	34	631	-261	2
chr2	106554667	106554668	chunk0100_64_1	10.0184	AR_DHT_Control	chr2	106554511	106554824	-135638705	-	Tigger3a	DNA	TcMar-Tigger	0	348	32	2
chr2	106559927	106559928	chunk0100_65_1	42.8565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106559737	106560320	-135633209	+	LTR10C	LTR	ERV1	7	591	0	2
chr2	106575267	106575268	chunk0100_68_1	86.7246	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106574994	106575367	-135618162	-	MER57B2	LTR	ERV1	-1	402	6	2
chr2	106576617	106576618	chunk0100_70_1	34.60601	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106576517	106576775	-135616754	+	L1M8	LINE	L1	574	870	-1485	2
chr2	106642878	106642879	chunk0100_73_1	6.3126	AR_DHT_Control	chr2	106642822	106642947	-135550582	+	L2a	LINE	L2	3295	3426	0	2
chr2	106751623	106751624	chunk0100_74_1	62.88	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	106751114	106752294	-135441235	+	L1MC3	LINE	L1	5186	6327	-6	2
chr2	106970981	106970982	chunk0100_80_1	10.1791	AR_DHT_Control	chr2	106970844	106972054	-135221475	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	2
chr2	107711473	107711474	chunk0100_84_1	144.2099	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	107711421	107711475	-134482054	+	A-rich	Low_complexity	Low_complexity	1	54	0	2
chr2	107789361	107789362	chunk0100_91_1	7.36432	AR_DHT_Control	chr2	107789275	107789406	-134404123	+	L1MB2	LINE	L1	1462	1698	-5311	2
chr2	108211389	108211390	chunk0100_97_1	73.5671	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	108209919	108212494	-133981035	-	L1M2	LINE	L1	-666	5625	3073	2
chr2	108358751	108358752	chunk0100_108_1	5.46037	AR_DHT_Control	chr2	108358707	108359707	-133833822	+	L1PB	LINE	L1	2292	3270	-2876	2
chr2	108377211	108377212	chunk0100_111_1	23.6261	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	108377039	108377387	-133816142	-	L2c	LINE	L2	-54	3372	3016	2
chr2	108440596	108440597	chunk0100_114_1	19.80953	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	108437450	108441245	-133752284	-	LOR1-int	LTR	ERV1	-2056	6064	1993	2
chr2	108689337	108689338	chunk0100_132_1	18.78287	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	108688730	108689449	-133504080	+	L1M4a2	LINE	L1	162	937	-1719	2
chr2	108691567	108691568	chunk0100_133_1	80.259	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	108691169	108691628	-133501901	-	L1MB7	LINE	L1	-1613	4533	4083	2
chr2	108799150	108799151	chunk0100_137_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	108798853	108799297	-133394232	-	L1MC4	LINE	L1	-143	7899	7416	2
chr2	108811840	108811841	chunk0100_138_1	17.3852	AR_DHT_Control	chr2	108811622	108812002	-133381527	-	L1PA17	LINE	L1	-18	6148	5777	2
chr2	108814131	108814132	chunk0100_139_1	9.34168	AR_DHT_Control	chr2	108813620	108814337	-133379192	-	L1ME2z	LINE	L1	-283	6161	5432	2
chr2	108825523	108825524	chunk0100_140_1	41.1015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	108825295	108827072	-133366457	-	L1MB8	LINE	L1	-5	6173	4321	2
chr2	108833375	108833376	chunk0100_142_1	9.21264	AR_DHT_Control	chr2	108832955	108833428	-133360101	+	L1MC2	LINE	L1	5846	6336	-8	2
chr2	108892308	108892309	chunk0100_143_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	108890544	108892963	-133300566	-	L1MA4A	LINE	L1	-4469	3097	730	2
chr2	108904908	108904909	chunk0100_144_1	43.7913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	108902403	108905047	-133288482	+	L1MD1	LINE	L1	3893	6632	-1	2
chr2	109010009	109010010	chunk0100_149_1	185.1249	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	109009850	109010062	-133183467	-	L1ME4a	LINE	L1	-196	5928	5747	2
chr2	109018702	109018703	chunk0100_152_1	49.53085	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	109018559	109018974	-133174555	+	L2b	LINE	L2	2936	3374	-1	2
chr2	109187563	109187564	chunk0100_157_1	46.3225	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	109187428	109187741	-133005788	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	2
chr2	109237385	109237386	chunk0100_162_1	50.73	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	109237299	109237424	-132956105	+	L1M5	LINE	L1	5377	5517	-607	2
chr2	109328459	109328460	chunk0100_167_1	16.6205	AR_DHT_Control	chr2	109327887	109328562	-132864967	-	L1MC5a	LINE	L1	0	2777	2098	2
chr2	109620339	109620340	chunk0100_172_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	109620251	109620420	-132573109	+	MamRep137	DNA	TcMar-Tigger	266	456	-54	2
chr2	110219851	110219852	chunk0100_177_1	72.70471	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	110219690	110220056	-131973473	-	L2c	LINE	L2	0	3387	3016	2
chr2	110768823	110768824	chunk0100_180_1	25.364	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	110768538	110768835	-131424694	-	L1PA15	LINE	L1	0	6165	5872	2
chr2	110782495	110782496	chunk0100_184_1	31.3633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	110782283	110782715	-131410814	+	Mam_R4	LINE	Dong-R4	2431	2884	-925	2
chr2	110955747	110955748	chunk0100_188_1	6.48643	AR_DHT_Control	chr2	110955462	110955870	-131237659	+	L2a	LINE	L2	2760	3184	-191	2
chr2	111072030	111072031	chunk0100_193_1	28.665	AR_DHT_Control	chr2	111071830	111072071	-131121458	-	L2c	LINE	L2	-5	3382	3135	2
chr2	111097674	111097675	chunk0100_194_1	50.5902	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	111097453	111098210	-131095319	+	L1MC3	LINE	L1	6686	7419	-366	2
chr2	111099046	111099047	chunk0100_195_1	5.31046	AR_DHT_Control	chr2	111098906	111099052	-131094477	-	MIRc	SINE	MIR	-61	207	54	2
chr2	111154706	111154707	chunk0100_197_1	21.62729	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	111154037	111154746	-131038783	-	L1MC4	LINE	L1	-2	8040	7304	2
chr2	111205945	111205946	chunk0100_202_1	8.18895	AR_DHT_Control	chr2	111204872	111206046	-130987483	+	Tigger3	DNA	TcMar-Tigger	1739	3029	0	2
chr2	111908856	111908857	chunk0100_211_1	17.76526	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	111908603	111908859	-130284670	-	MLT1J	LTR	ERVL-MaLR	-14	498	230	2
chr2	111920131	111920132	chunk0100_213_1	7.69414	AR_DHT_Control	chr2	111920128	111920189	-130273340	+	MER53	DNA	hAT	131	191	-2	2
chr2	111971069	111971070	chunk0100_222_1	19.69589	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	111970867	111971986	-130221543	-	L1MEc	LINE	L1	-2524	3795	2633	2
chr2	112027949	112027950	chunk0100_225_1	17.09359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	112027858	112028062	-130165467	-	MER58A	DNA	hAT-Charlie	0	224	9	2
chr2	112074129	112074130	chunk0100_226_1	9.21264	AR_DHT_Control	chr2	112073207	112074729	-130118800	-	L1PREC2	LINE	L1	-3113	3653	2103	2
chr2	112085010	112085011	chunk0100_229_1	74.1558	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	112084882	112085108	-130108421	-	MER58A	DNA	hAT-Charlie	0	224	2	2
chr2	112294447	112294448	chunk0100_231_1	23.14854	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	112294356	112294835	-129898694	-	LTR37-int	LTR	ERV1	-929	3131	2646	2
chr2	112966493	112966494	chunk0100_247_1	52.9451	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	112966158	112966730	-129226799	+	Charlie17	DNA	hAT-Charlie	477	1084	-1832	2
chr2	113047031	113047032	chunk0100_250_1	71.05917	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	113046507	113047287	-129146242	-	L1MC3	LINE	L1	-198	7587	6747	2
chr2	113134287	113134288	chunk0100_253_1	9.87004	AR_DHT_Control	chr2	113134203	113134614	-129058915	+	L1ME3B	LINE	L1	5704	6147	-95	2
chr2	113159189	113159190	chunk0100_255_1	98.0566	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	113159065	113159495	-129034034	-	L2a	LINE	L2	-4	3422	2973	2
chr2	113206644	113206645	chunk0100_257_1	56.57781	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	113206509	113206726	-128986803	+	MIR	SINE	MIR	27	260	-2	2
chr2	113253604	113253605	chunk0100_262_1	9.99437	AR_DHT_Control	chr2	113253484	113253742	-128939787	+	L2c	LINE	L2	2944	3208	-179	2
chr2	113738547	113738548	chunk0100_271_1	76.6647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	113737979	113738609	-128454920	-	L1MA9	LINE	L1	-32	6280	5643	2
chr2	114093302	114093303	chunk0100_285_1	15.3744	AR_DHT_Control	chr2	114092633	114093704	-128099825	-	L1MC1	LINE	L1	0	6508	5412	2
chr2	114143813	114143814	chunk0100_286_1	26.6178	AR_DHT_Control	chr2	114143689	114143868	-128049661	+	L2c	LINE	L2	3202	3377	-10	2
chr2	114775967	114775968	chunk0100_291_1	8.21385	AR_DHT_Control	chr2	114775799	114776096	-127417433	-	L2a	LINE	L2	-13	3413	3098	2
chr2	114797597	114797598	chunk0100_292_1	17.0578	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	114797488	114798421	-127395108	+	L1MC3	LINE	L1	6820	7777	-8	2
chr2	114909817	114909818	chunk0100_294_1	15.54748	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	114909584	114909936	-127283593	+	L1MEd	LINE	L1	424	771	-6315	2
chr2	115174880	115174881	chunk0100_299_1	7.36432	AR_DHT_Control	chr2	115174739	115175067	-127018462	+	MamRTE1	LINE	RTE-BovB	3189	3516	-296	2
chr2	115223892	115223893	chunk0100_300_1	8.27376	AR_DHT_Control	chr2	115223762	115223938	-126969591	+	L1ME4a	LINE	L1	5644	5829	-295	2
chr2	115824681	115824682	chunk0100_309_1	13.2288	AR_DHT_Control	chr2	115824299	115824752	-126368777	-	L1PA8	LINE	L1	-1	6171	5724	2
chr2	115899972	115899973	chunk0100_310_1	10.5893	AR_DHT_Control	chr2	115899874	115899982	-126293547	+	L1ME3A	LINE	L1	6017	6142	-31	2
chr2	115909229	115909230	chunk0100_311_1	8.27376	AR_DHT_Control	chr2	115908764	115909263	-126284266	-	LTR40a	LTR	ERVL	-9	510	1	2
chr2	115925342	115925343	chunk0100_314_1	185.9119	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	115924504	115925725	-126267804	-	L1PB1	LINE	L1	-364	5787	4557	2
chr2	116117449	116117450	chunk0100_315_1	6.48643	AR_DHT_Control	chr2	116117420	116117789	-126075740	+	L2c	LINE	L2	2956	3373	-2	2
chr2	116476048	116476049	chunk0100_321_1	7.92341	AR_DHT_Control	chr2	116475954	116476099	-125717430	+	PrimLTR79	LTR	ERV1	360	503	0	2
chr2	116490188	116490189	chunk0100_323_1	8.27376	AR_DHT_Control	chr2	116489764	116490463	-125703066	+	MLT1B-int	LTR	ERVL-MaLR	713	1444	-45	2
chr2	116514233	116514234	chunk0100_324_1	6.98475	AR_DHT_Control	chr2	116514182	116514461	-125679068	+	AluJr	SINE	Alu	2	279	-33	2
chr2	116537606	116537607	chunk0100_325_1	20.5155	AR_DHT_Control	chr2	116537429	116538222	-125655307	+	L1ME1	LINE	L1	5322	6164	-15	2
chr2	116613727	116613728	chunk0100_326_1	4.06817	AR_DHT_Control	chr2	116613372	116617460	-125576069	+	L1MB5	LINE	L1	345	4646	-2101	2
chr2	116644926	116644927	chunk0100_327_1	4.83532	AR_DHT_Control	chr2	116643624	116646377	-125547152	-	Tigger4	DNA	TcMar-Tigger	0	2731	1	2
chr2	116665538	116665539	chunk0100_328_1	6.01382	AR_DHT_Control	chr2	116665118	116666203	-125527326	-	L1MB7	LINE	L1	-10	6672	5540	2
chr2	116666119	116666120	chunk0100_330_1	20.6627	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	116665118	116666203	-125527326	-	L1MB7	LINE	L1	-10	6672	5540	2
chr2	116690553	116690554	chunk0100_332_1	18.84475	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	116689838	116690780	-125502749	-	Tigger3b	DNA	TcMar-Tigger	-375	856	2	2
chr2	116782667	116782668	chunk0100_338_1	19.6725	AR_DHT_Control	chr2	116782069	116784653	-125408876	+	MER101-int	LTR	ERV1	2365	4586	-2053	2
chr2	116928697	116928698	chunk0100_340_1	6.48643	AR_DHT_Control	chr2	116926918	116928936	-125264593	+	L1MC3	LINE	L1	5597	7773	-12	2
chr2	117144629	117144630	chunk0100_343_1	7.97917	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	117144139	117144916	-125048613	-	L1M4a1	LINE	L1	-537	2540	1403	2
chr2	117178950	117178951	chunk0100_344_1	13.3499	AR_DHT_Control	chr2	117178890	117179179	-125014350	-	MER92C	LTR	ERV1	0	590	309	2
chr2	117355567	117355568	chunk0100_348_1	8.35541	AR_DHT_Control	chr2	117355464	117355662	-124837867	-	L2c	LINE	L2	-11	3376	3159	2
chr2	117552113	117552114	chunk0100_355_1	56.7366	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	117552097	117552135	-124641394	+	(CA)n	Simple_repeat	Simple_repeat	1	38	0	2
chr2	117679078	117679079	chunk0100_358_1	64.67427	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	117678757	117679095	-124514434	-	MER58B	DNA	hAT-Charlie	-1	340	4	2
chr2	117981850	117981851	chunk0100_371_1	7.08233	AR_DHT_Control	chr2	117981740	117981859	-124211670	-	MER3	DNA	hAT-Charlie	-40	169	40	2
chr2	118056435	118056436	chunk0100_376_1	14.5084	AR_DHT_Control	chr2	118056412	118056548	-124136981	-	MIRb	SINE	MIR	-118	150	20	2
chr2	118208171	118208172	chunk0100_384_1	8.27376	AR_DHT_Control	chr2	118208107	118208175	-123985354	+	MER5A	DNA	hAT-Charlie	116	187	-2	2
chr2	118301489	118301490	chunk0100_386_1	13.68224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	118301407	118301522	-123892007	-	L2b	LINE	L2	0	3426	3270	2
chr2	118347930	118347931	chunk0100_389_1	10.1791	AR_DHT_Control	chr2	118347906	118348107	-123845422	-	MER58A	DNA	hAT-Charlie	-7	217	1	2
chr2	118546765	118546766	chunk0100_390_1	26.931	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	118546759	118546789	-123646740	+	(TG)n	Simple_repeat	Simple_repeat	1	30	0	2
chr2	119242699	119242700	chunk0100_395_1	9.1218	AR_DHT_Control	chr2	119242647	119242863	-122950666	-	MIR	SINE	MIR	-12	250	20	2
chr2	119276051	119276052	chunk0100_397_1	11.1716	AR_DHT_Control	chr2	119275942	119276394	-122917135	+	MER83	LTR	ERV1	1	448	0	2
chr2	119366219	119366220	chunk0100_406_1	156.517	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	119365842	119366263	-122827266	+	L2a	LINE	L2	2831	3408	-18	2
chr2	119741259	119741260	chunk0100_410_1	12.78384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	119741215	119741289	-122452240	-	MLT1L	LTR	ERVL-MaLR	-512	98	21	2
chr2	119757570	119757571	chunk0100_412_1	31.38443	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	119757219	119757887	-122435642	-	Charlie29a	DNA	hAT-Charlie	0	719	4	2
chr2	119828180	119828181	chunk0100_417_1	4.83532	AR_DHT_Control	chr2	119827884	119828307	-122365222	+	MLT1G3	LTR	ERVL-MaLR	1	419	-129	2
chr2	119838255	119838256	chunk0100_418_1	15.59879	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	119838211	119838264	-122355265	-	L1PA11	LINE	L1	-1	6173	6121	2
chr2	120118428	120118429	chunk0100_425_1	19.2046	AR_DHT_Control	chr2	120118347	120119629	-122073900	-	L1PA11	LINE	L1	-3	6171	4879	2
chr2	120136021	120136022	chunk0100_426_1	17.51121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	120133185	120140452	-122053077	+	L1MA3	LINE	L1	13	7724	0	2
chr2	120666767	120666768	chunk0100_437_1	8.8907	AR_DHT_Control	chr2	120666761	120667151	-121526378	-	L1MEd	LINE	L1	-5030	1195	749	2
chr2	120687551	120687552	chunk0100_438_1	20.65643	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	120687175	120687596	-121505933	-	MLT1J	LTR	ERVL-MaLR	-3	509	79	2
chr2	120747100	120747101	chunk0100_443_1	14.43854	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	120746773	120747168	-121446361	-	L1ME4a	LINE	L1	-127	5997	5591	2
chr2	120955645	120955646	chunk0100_448_1	172.6616	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	120955594	120956391	-121237138	-	L2a	LINE	L2	-16	3410	2415	2
chr2	121001119	121001120	chunk0100_451_1	50.39527	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	121001094	121001289	-121192240	-	MIR	SINE	MIR	-26	236	8	2
chr2	121136700	121136701	chunk0100_459_1	4.19326	AR_DHT_Control	chr2	121136577	121136781	-121056748	+	MLT1A0	LTR	ERVL-MaLR	158	365	0	2
chr2	121502490	121502491	chunk0101_17_1	9.21264	AR_DHT_Control	chr2	121502189	121503046	-120690483	-	L2a	LINE	L2	-1	3425	2525	2
chr2	121635081	121635082	chunk0101_25_1	8.27376	AR_DHT_Control	chr2	121635055	121635229	-120558300	+	FRAM	SINE	Alu	1	167	-9	2
chr2	121873020	121873021	chunk0101_30_1	22.6321	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	121872991	121873078	-120320451	-	MamTip3	DNA	hAT-Tip100	-316	184	98	2
chr2	121877685	121877686	chunk0101_32_1	66.9302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	121877614	121877860	-120315669	+	Tigger3a	DNA	TcMar-Tigger	93	347	-1	2
chr2	122294086	122294087	chunk0101_33_1	6.48643	AR_DHT_Control	chr2	122294030	122294459	-119899070	-	L2c	LINE	L2	-9	3378	2972	2
chr2	122366599	122366600	chunk0101_35_1	156.40351	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	122365657	122366626	-119826903	-	L2a	LINE	L2	-378	3041	1980	2
chr2	122409863	122409864	chunk0101_38_1	69.8965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	122409750	122409868	-119783661	+	MER58A	DNA	hAT-Charlie	2	119	-105	2
chr2	122540137	122540138	chunk0101_42_1	42.7186	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	122539998	122540355	-119653174	-	L2a	LINE	L2	-171	3255	2878	2
chr2	122545981	122545982	chunk0101_43_1	74.723	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	122545903	122546308	-119647221	+	LTR24	LTR	ERV1	10	467	0	2
chr2	122933276	122933277	chunk0101_46_1	39.3376	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	122933180	122933711	-119259818	+	LTR40a	LTR	ERVL	1	519	0	2
chr2	122969301	122969302	chunk0101_47_1	26.4717	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	122969121	122969466	-119224063	-	MLT1A0	LTR	ERVL-MaLR	0	365	13	2
chr2	123105189	123105190	chunk0101_52_1	7.08133	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123104385	123105534	-119087995	+	L1MCb	LINE	L1	5516	6160	-412	2
chr2	123116438	123116439	chunk0101_53_1	45.7781	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123116335	123118826	-119074703	-	L1PA15	LINE	L1	-236	5929	3403	2
chr2	123159395	123159396	chunk0101_58_1	26.11509	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123159004	123159427	-119034102	+	L1MA3	LINE	L1	5877	6300	-5	2
chr2	123290368	123290369	chunk0101_60_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123289797	123290369	-118903160	+	MER67A	LTR	ERV1	4	543	0	2
chr2	123494579	123494580	chunk0101_64_1	22.4504	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123494319	123495814	-118697715	+	ERVL-B4-int	LTR	ERVL	2026	3518	-2196	2
chr2	123506053	123506054	chunk0101_65_1	44.8059	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123506033	123506249	-118687280	+	L1ME1	LINE	L1	16	238	-6171	2
chr2	123514023	123514024	chunk0101_66_1	6.13992	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123514000	123514201	-118679328	-	L2a	LINE	L2	0	3426	3190	2
chr2	123732711	123732712	chunk0101_73_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	123732487	123732726	-118460803	-	L4_C_Mam	LINE	RTE-X	-23	5115	4869	2
chr2	123738969	123738970	chunk0101_74_1	25.9529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	123733032	123739052	-118454477	-	L1MB4	LINE	L1	-320	6461	1	2
chr2	123840738	123840739	chunk0101_77_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	123839277	123846603	-118346926	+	L1PA16	LINE	L1	1	6869	0	2
chr2	124039994	124039995	chunk0101_81_1	7.36432	AR_DHT_Control	chr2	124039956	124040092	-118153437	-	MER134	DNA?	DNA?	-376	137	2	2
chr2	124084086	124084087	chunk0101_85_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	124083385	124084269	-118109260	-	L1MD1	LINE	L1	-920	5617	4640	2
chr2	124646191	124646192	chunk0101_97_1	24.4467	AR_DHT_Control	chr2	124646118	124646309	-117547220	-	MIR3	SINE	MIR	-23	185	2	2
chr2	125144287	125144288	chunk0101_102_1	9.21264	AR_DHT_Control	chr2	125144173	125144324	-117049205	+	L1MEg	LINE	L1	3948	4096	-2050	2
chr2	125216497	125216498	chunk0101_106_1	6.48643	AR_DHT_Control	chr2	125216078	125221517	-116972012	-	L1MA5A	LINE	L1	0	7716	2105	2
chr2	125463580	125463581	chunk0101_108_1	12.1886	AR_DHT_Control	chr2	125463079	125464369	-116729160	+	L1ME2	LINE	L1	4328	5691	-473	2
chr2	125657124	125657125	chunk0101_109_1	9.21264	AR_DHT_Control	chr2	125656955	125657257	-116536272	+	L1MA5A	LINE	L1	5979	6289	-8	2
chr2	126080991	126080992	chunk0101_114_1	15.3744	AR_DHT_Control	chr2	126080845	126081032	-116112497	-	MER5B	DNA	hAT-Charlie	0	178	1	2
chr2	126482483	126482484	chunk0101_117_1	9.14794	AR_DHT_Control	chr2	126482268	126482555	-115710974	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	2
chr2	126482952	126482953	chunk0101_118_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	126482637	126483632	-115709897	-	LTR28C	LTR	ERV1	0	1077	1	2
chr2	126495475	126495476	chunk0101_119_1	26.89002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	126494742	126495620	-115697909	+	L1M4	LINE	L1	15	891	-6626	2
chr2	126998349	126998350	chunk0101_122_1	10.1791	AR_DHT_Control	chr2	126998217	126998407	-115195122	+	L1ME3	LINE	L1	5754	5953	-209	2
chr2	127112304	127112305	chunk0101_125_1	10.2513	AR_DHT_Control	chr2	127111681	127112558	-115080971	-	L1MC1	LINE	L1	-19	6314	5429	2
chr2	127144129	127144130	chunk0101_129_1	78.7971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	127144073	127144207	-115049322	-	MIR	SINE	MIR	0	262	106	2
chr2	127432086	127432087	chunk0101_136_1	78.2187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	127432077	127432683	-114760846	+	L1MD	LINE	L1	4305	5002	-1144	2
chr2	127476339	127476340	chunk0101_139_1	14.66193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	127474865	127476633	-114716896	+	L1MB3	LINE	L1	3104	4939	-1742	2
chr2	127527206	127527207	chunk0101_142_1	6.13915	AR_DHT_Control	chr2	127527074	127527554	-114665975	+	MER92C	LTR	ERV1	8	590	0	2
chr2	127615726	127615727	chunk0101_143_1	27.9769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	127615266	127615770	-114577759	-	LTR3B_	LTR	ERVK	-1	498	1	2
chr2	127897759	127897760	chunk0101_145_1	64.4545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	127897563	127898254	-114295275	+	L1MD1	LINE	L1	5585	6242	0	2
chr2	127907832	127907833	chunk0101_147_1	9.01771	AR_DHT_Control	chr2	127907676	127907982	-114285547	+	L1ME3A	LINE	L1	5821	6142	-31	2
chr2	127914003	127914004	chunk0101_148_1	5.6425	AR_DHT_Control	chr2	127913965	127914088	-114279441	-	Tigger1	DNA	TcMar-Tigger	0	2418	2306	2
chr2	127932696	127932697	chunk0101_149_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	127932617	127932919	-114260610	+	Tigger3b	DNA	TcMar-Tigger	1	317	-914	2
chr2	127933504	127933505	chunk0101_150_1	25.6689	AR_DHT_Control	chr2	127933215	127933649	-114259880	+	Tigger3	DNA	TcMar-Tigger	2562	3028	-1	2
chr2	127967808	127967809	chunk0101_151_1	7.36432	AR_DHT_Control	chr2	127967695	127968001	-114225528	+	L1M4	LINE	L1	2533	2848	-3298	2
chr2	128231344	128231345	chunk0101_155_1	41.8994	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	128231027	128231547	-113961982	-	L1ME1	LINE	L1	-353	5826	5282	2
chr2	128249588	128249589	chunk0101_157_1	20.67734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	128249211	128249625	-113943904	+	L1M5	LINE	L1	5357	5793	-651	2
chr2	128579431	128579432	chunk0101_162_1	19.5688	AR_DHT_Control	chr2	128579164	128579606	-113613923	+	LTR24	LTR	ERV1	1	467	0	2
chr2	128584740	128584741	chunk0101_164_1	211.18176	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	128584054	128585637	-113607892	-	L1MEc	LINE	L1	-2792	3527	2112	2
chr2	128595321	128595322	chunk0101_165_1	8.18895	AR_DHT_Control	chr2	128595146	128595326	-113598203	+	L2a	LINE	L2	3189	3381	-45	2
chr2	128641207	128641208	chunk0101_166_1	13.9652	AR_DHT_Control	chr2	128641183	128641389	-113552140	-	MIR	SINE	MIR	-43	225	12	2
chr2	129036166	129036167	chunk0101_169_1	4.83532	AR_DHT_Control	chr2	129035980	129036207	-113157322	+	L1MD	LINE	L1	3797	3975	-2171	2
chr2	129101254	129101255	chunk0101_174_1	187.5804	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	129101188	129101260	-113092269	+	MIRc	SINE	MIR	76	153	-55	2
chr2	129261429	129261430	chunk0101_175_1	11.7947	AR_DHT_Control	chr2	129261370	129261497	-112932032	-	L1ME4a	LINE	L1	-747	5377	5255	2
chr2	129285201	129285202	chunk0101_176_1	35.3737	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	129284611	129285457	-112908072	-	L1MD2	LINE	L1	-17	6342	5483	2
chr2	129334933	129334934	chunk0101_179_1	173.5655	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	129334917	129335119	-112858410	-	MIRb	SINE	MIR	-23	245	20	2
chr2	129370507	129370508	chunk0101_184_1	31.16942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	129370440	129370608	-112822921	-	L1M4	LINE	L1	-1016	5130	4956	2
chr2	129382610	129382611	chunk0101_185_1	9.45492	AR_DHT_Control	chr2	129381126	129384991	-112808538	-	L1MD2	LINE	L1	0	6750	2808	2
chr2	129452819	129452820	chunk0101_187_1	26.6473	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	129452665	129453535	-112739994	+	L1MD2	LINE	L1	4365	5214	-932	2
chr2	129507831	129507832	chunk0101_188_1	6.54035	AR_DHT_Control	chr2	129507633	129508193	-112685336	+	ERVL-B4-int	LTR	ERVL	30	612	-5102	2
chr2	129529484	129529485	chunk0101_189_1	84.428	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	129528522	129529553	-112663976	+	L1MA3	LINE	L1	6711	7724	0	2
chr2	129826388	129826389	chunk0101_195_1	32.55086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	129826168	129826449	-112367080	+	L1MA5	LINE	L1	6019	6300	0	2
chr2	129945834	129945835	chunk0101_197_1	68.4876	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	129945636	129945866	-112247663	+	L1MC4a	LINE	L1	6404	6639	-1243	2
chr2	129968789	129968790	chunk0101_200_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	129968713	129968897	-112224632	+	MIRb	SINE	MIR	47	236	-32	2
chr2	130148634	130148635	chunk0101_204_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	130148530	130148654	-112044875	-	MLT2B1	LTR	ERVL	-396	124	1	2
chr2	130240850	130240851	chunk0101_207_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	130240832	130241135	-111952394	-	AluYj4	SINE	Alu	-8	303	1	2
chr2	130241216	130241217	chunk0101_208_1	7.36432	AR_DHT_Control	chr2	130241163	130241258	-111952271	+	L2c	LINE	L2	3264	3381	-6	2
chr2	130255904	130255905	chunk0101_210_1	7.26927	AR_DHT_Control	chr2	130255836	130256127	-111937402	+	MER110A	LTR	ERV1	175	482	-9	2
chr2	130260696	130260697	chunk0101_211_1	15.6062	AR_DHT_Control	chr2	130260567	130260815	-111932714	+	MLT1L	LTR	ERVL-MaLR	336	586	-24	2
chr2	130294574	130294575	chunk0101_212_1	13.2699	AR_DHT_Control	chr2	130294486	130295203	-111898326	-	L1PB	LINE	L1	-1171	4975	4273	2
chr2	130356516	130356517	chunk0101_213_1	5.10203	AR_DHT_Control	chr2	130356488	130356533	-111836996	+	(GCGG)n	Simple_repeat	Simple_repeat	1	46	0	2
chr2	130360738	130360739	chunk0101_214_1	9.31879	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	130360561	130360741	-111832788	+	MER58A	DNA	hAT-Charlie	43	224	0	2
chr2	130624873	130624874	chunk0101_215_1	54.6538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	130624755	130624902	-111568627	-	Zaphod2	DNA	hAT-Tip100	-3217	307	155	2
chr2	130817045	130817046	chunk0101_219_1	35.5783	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	130816949	130817665	-111375864	+	L1ME3Cz	LINE	L1	97	713	-284	2
chr2	130852266	130852267	chunk0101_221_1	4.33257	AR_DHT_Control	chr2	130852096	130852415	-111341114	-	L2b	LINE	L2	-1	3374	3047	2
chr2	131105054	131105055	chunk0101_227_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	131104659	131105113	-111088416	-	L1MC3	LINE	L1	-589	7196	6710	2
chr2	131141741	131141742	chunk0101_232_1	13.37151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	131141729	131142295	-111051234	-	MER6A	DNA	TcMar-Tigger	0	605	1	2
chr2	131199519	131199520	chunk0101_234_1	48.5142	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	131199500	131199760	-110993769	+	Tigger3b	DNA	TcMar-Tigger	2	288	-2741	2
chr2	131556508	131556509	chunk0101_243_1	6.48643	AR_DHT_Control	chr2	131555875	131556823	-110636706	-	L1PA16	LINE	L1	-234	5920	4884	2
chr2	131604910	131604911	chunk0101_244_1	119.733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	131604866	131604994	-110588535	-	Zaphod2	DNA	hAT-Tip100	-3316	208	81	2
chr2	131895358	131895359	chunk0101_247_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	131895357	131895385	-110298144	+	(TTTAA)n	Simple_repeat	Simple_repeat	1	28	0	2
chr2	132287057	132287058	chunk0101_248_1	18.93863	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	132286522	132287784	-109905745	-	ACRO1	Satellite	acro	-55	1265	1	2
chr2	132617159	132617160	chunk0101_253_1	34.7365	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	132617124	132617631	-109575898	-	L1M5	LINE	L1	-328	5796	5255	2
chr2	133795659	133795660	chunk0101_279_1	23.93	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	133795208	133795792	-108397737	-	L1MC3	LINE	L1	-863	5283	4691	2
chr2	134011341	134011342	chunk0101_280_1	19.96498	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	134011169	134011396	-108182133	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr2	134101930	134101931	chunk0101_282_1	54.4907	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	134101149	134102432	-108091097	-	MER92-int	LTR	ERV1	-2396	2822	1561	2
chr2	134284641	134284642	chunk0101_287_1	22.9183	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	134284588	134284819	-107908710	-	MIRb	SINE	MIR	0	268	9	2
chr2	135125268	135125269	chunk0101_306_1	8.27376	AR_DHT_Control	chr2	135124956	135125295	-107068234	-	L1MB7	LINE	L1	-20	6164	5830	2
chr2	135201906	135201907	chunk0101_313_1	6.04605	AR_DHT_Control	chr2	135201876	135202240	-106991289	+	L1ME4c	LINE	L1	297	654	-176	2
chr2	135393490	135393491	chunk0101_314_1	6.48643	AR_DHT_Control	chr2	135393375	135393866	-106799663	+	L1MEj	LINE	L1	753	1254	-906	2
chr2	135450725	135450726	chunk0101_315_1	9.70412	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	135450557	135451279	-106742250	+	L1MEc	LINE	L1	19	831	-5569	2
chr2	135536397	135536398	chunk0101_316_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	135536141	135536446	-106657083	-	AluJo	SINE	Alu	-16	296	1	2
chr2	135555603	135555604	chunk0101_317_1	30.45534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	135555325	135555744	-106637785	+	L1MB8	LINE	L1	5401	5816	-362	2
chr2	135576571	135576572	chunk0101_319_1	13.2288	AR_DHT_Control	chr2	135576510	135577043	-106616486	+	L1MB8	LINE	L1	5652	6178	0	2
chr2	135965424	135965425	chunk0101_322_1	68.6313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	135965323	135965748	-106227781	+	L1ME4c	LINE	L1	1	410	-420	2
chr2	136072854	136072855	chunk0101_331_1	78.84454	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	136072260	136073225	-106120304	-	HERVK3-int	LTR	ERVK	0	7202	6223	2
chr2	136105176	136105177	chunk0101_333_1	10.1791	AR_DHT_Control	chr2	136105109	136105442	-106088087	-	Tigger3a	DNA	TcMar-Tigger	-1	347	5	2
chr2	137140797	137140798	chunk0101_340_1	6.86304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	137140671	137141238	-105052291	-	L2a	LINE	L2	0	3426	2836	2
chr2	137748166	137748167	chunk0101_348_1	53.5334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	137748132	137748324	-104445205	-	L1MEc	LINE	L1	-3968	2432	2248	2
chr2	137807379	137807380	chunk0101_349_1	11.7386	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	137807282	137807837	-104385692	-	L2a	LINE	L2	-6	3420	2821	2
chr2	138504014	138504015	chunk0101_379_1	6.49378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	138503991	138504221	-103689308	-	MER113A	DNA	hAT-Charlie	-39	275	33	2
chr2	138798845	138798846	chunk0101_396_1	63.2052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	138795654	138802086	-103391443	+	L1PA7	LINE	L1	8	6461	-8	2
chr2	138825257	138825258	chunk0101_399_1	19.96482	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	138825073	138825424	-103368105	-	Charlie10	DNA	hAT-Charlie	-167	2655	2294	2
chr2	138831702	138831703	chunk0101_400_1	15.92093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	138831664	138832212	-103361317	+	Tigger3	DNA	TcMar-Tigger	2467	3029	0	2
chr2	138881769	138881770	chunk0101_402_1	5.6425	AR_DHT_Control	chr2	138881739	138881927	-103311602	+	LTR81A	LTR	Gypsy	109	310	-1040	2
chr2	138942146	138942147	chunk0101_406_1	19.3054	AR_DHT_Control	chr2	138939402	138943113	-103250416	-	L1PA6	LINE	L1	-2458	3688	5	2
chr2	139087155	139087156	chunk0101_409_1	9.87004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139085855	139087413	-103106116	-	L1MA7	LINE	L1	0	6291	4747	2
chr2	139157999	139158000	chunk0101_411_1	33.9686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	139157836	139158035	-103035494	+	MIR	SINE	MIR	61	262	0	2
chr2	139189685	139189686	chunk0101_415_1	95.8001	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	139189583	139189871	-103003658	-	L4_A_Mam	LINE	RTE-X	-183	4807	4538	2
chr2	139206844	139206845	chunk0101_417_1	5.6425	AR_DHT_Control	chr2	139206801	139206907	-102986622	+	L2b	LINE	L2	3254	3374	-1	2
chr2	139252597	139252598	chunk0101_421_1	6.58746	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139252431	139252726	-102940803	-	HAL1b	LINE	L1	-798	2014	1717	2
chr2	139255769	139255770	chunk0101_422_1	94.5761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139254128	139255941	-102937588	+	L1MD1	LINE	L1	2827	4641	-1896	2
chr2	139279650	139279651	chunk0101_424_1	75.2193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	139279264	139279764	-102913765	-	LTR108e_Mam	LTR	ERVL	-4	544	1	2
chr2	139502015	139502016	chunk0101_441_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139500000	139502942	-102690587	+	L1PA14	LINE	L1	3253	6160	-1	2
chr2	139617517	139617518	chunk0101_444_1	25.0071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139616882	139617589	-102575940	-	L1PBa	LINE	L1	-360	6507	5785	2
chr2	139692667	139692668	chunk0101_447_1	21.42242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139692528	139692685	-102500844	-	L3	LINE	CR1	-3891	208	38	2
chr2	139692667	139692668	chunk0101_447_1	21.42242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	139692601	139692841	-102500688	+	L2b	LINE	L2	3145	3387	0	2
chr2	139828122	139828123	chunk0101_448_1	4.06817	AR_DHT_Control	chr2	139828017	139828556	-102364973	+	MER34A1	LTR	ERV1	57	587	0	2
chr2	140127179	140127180	chunk0101_453_1	7.97574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	140126808	140127670	-102065859	+	L1MEd	LINE	L1	2121	3055	-3091	2
chr2	140143617	140143618	chunk0101_455_1	4.83532	AR_DHT_Control	chr2	140143556	140143654	-102049875	+	L1ME3G	LINE	L1	535	632	-292	2
chr2	140189939	140189940	chunk0101_456_1	10.8743	AR_DHT_Control	chr2	140189924	140189979	-102003550	+	(TAA)n	Simple_repeat	Simple_repeat	1	56	0	2
chr2	140362423	140362424	chunk0101_461_1	25.636	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	140362405	140362481	-101831048	-	Tigger5b	DNA	TcMar-Tigger	-6	466	392	2
chr2	140448041	140448042	chunk0101_464_1	13.81436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	140447500	140448257	-101745272	-	Tigger1	DNA	TcMar-Tigger	-1656	762	1	2
chr2	140889976	140889977	chunk0101_469_1	18.29505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	140889766	140890317	-101303212	+	L1ME3Cz	LINE	L1	227	883	-114	2
chr2	141004225	141004226	chunk0102_2_1	70.04	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	141004172	141004673	-101188856	+	MLT2B4	LTR	ERVL	1	556	0	2
chr2	141336951	141336952	chunk0102_10_1	19.89995	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	141336596	141337641	-100855888	-	L1ME1	LINE	L1	-61	6516	5475	2
chr2	141530647	141530648	chunk0102_22_1	7.91724	AR_DHT_Control	chr2	141530465	141531053	-100662476	-	L2a	LINE	L2	0	3426	2789	2
chr2	141666443	141666444	chunk0102_27_1	59.43741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	141666371	141666479	-100527050	-	FLAM_C	SINE	Alu	-159	143	40	2
chr2	141908364	141908365	chunk0102_41_1	43.3883	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	141908364	141908501	-100285028	-	L2b	LINE	L2	-33	3342	3195	2
chr2	142531684	142531685	chunk0102_46_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	142531238	142531864	-99661665	+	MER21C	LTR	ERVL	99	902	-36	2
chr2	142535540	142535541	chunk0102_47_1	6.48643	AR_DHT_Control	chr2	142535096	142536214	-99657315	+	Tigger3b	DNA	TcMar-Tigger	1	1168	-63	2
chr2	142696698	142696699	chunk0102_48_1	23.6387	AR_DHT_Control	chr2	142696086	142697500	-99496029	+	L1PBa	LINE	L1	1881	3385	-3530	2
chr2	142846395	142846396	chunk0102_59_1	9.21264	AR_DHT_Control	chr2	142845755	142846427	-99347102	-	Helitron1Nb_Mam	RC	Helitron	-391	725	51	2
chr2	142863696	142863697	chunk0102_62_1	12.1886	AR_DHT_Control	chr2	142863684	142863808	-99329721	+	MamRTE1	LINE	RTE-BovB	3587	3714	-98	2
chr2	142874639	142874640	chunk0102_64_1	16.37128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	142874498	142874653	-99318876	+	MamGypLTR1b	LTR	Gypsy	602	757	-25	2
chr2	142915830	142915831	chunk0102_65_1	8.27376	AR_DHT_Control	chr2	142915801	142916176	-99277353	+	MLT1B	LTR	ERVL-MaLR	1	385	-5	2
chr2	143335128	143335129	chunk0102_83_1	19.2209	AR_DHT_Control	chr2	143335120	143335213	-98858316	-	MER103C	DNA	hAT-Charlie	-189	108	1	2
chr2	143336932	143336933	chunk0102_84_1	6.00544	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	143336842	143337389	-98856140	-	L2b	LINE	L2	0	3375	2821	2
chr2	143516137	143516138	chunk0102_87_1	22.70222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	143515899	143516223	-98677306	+	L2c	LINE	L2	2998	3343	-44	2
chr2	143827788	143827789	chunk0102_90_1	26.48502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	143827653	143827813	-98365716	-	L2a	LINE	L2	0	3426	3266	2
chr2	144218021	144218022	chunk0102_96_1	195.4083	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	144217910	144218080	-97975449	+	L2b	LINE	L2	3230	3425	-1	2
chr2	144304231	144304232	chunk0102_101_1	65.7606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	144303670	144304559	-97888970	+	L1ME1	LINE	L1	28	979	-5330	2
chr2	144406281	144406282	chunk0102_107_1	11.98055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	144406231	144406934	-97786595	-	L2a	LINE	L2	0	3426	2639	2
chr2	144542167	144542168	chunk0102_112_1	18.09184	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	144542147	144542273	-97651256	-	MIRb	SINE	MIR	-6	262	139	2
chr2	144693686	144693687	chunk0102_116_1	4.9245	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	144693616	144694040	-97499489	-	L1ME4a	LINE	L1	-49	6075	5601	2
chr2	145233324	145233325	chunk0102_129_1	54.82563	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	145233171	145233333	-96960196	-	HAL1	LINE	L1	-1365	1142	993	2
chr2	146121168	146121169	chunk0102_139_1	22.37674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	146119664	146121582	-96071947	+	Charlie10	DNA	hAT-Charlie	59	2117	-705	2
chr2	146247318	146247319	chunk0102_142_1	23.7489	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	146247266	146248036	-95945493	+	HAL1	LINE	L1	819	1557	-950	2
chr2	146642615	146642616	chunk0102_144_1	10.1791	AR_DHT_Control	chr2	146641825	146648001	-95545528	+	L1PA6	LINE	L1	174	6324	-3	2
chr2	146939590	146939591	chunk0102_148_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	146939533	146939598	-95253931	+	L2a	LINE	L2	3358	3422	-4	2
chr2	147133791	147133792	chunk0102_152_1	119.54814	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	147133695	147133946	-95059583	+	Eulor2A	DNA?	DNA?	9	267	-41	2
chr2	147203881	147203882	chunk0102_155_1	53.9213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	147203836	147203951	-94989578	+	MER102b	DNA	hAT-Charlie	226	340	-1	2
chr2	147262071	147262072	chunk0102_160_1	17.8953	AR_DHT_Control	chr2	147262020	147262183	-94931346	+	MIRc	SINE	MIR	30	203	-65	2
chr2	147285103	147285104	chunk0102_161_1	206.7126	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	147285061	147285165	-94908364	-	L2b	LINE	L2	0	3375	3272	2
chr2	147403274	147403275	chunk0102_165_1	13.2288	AR_DHT_Control	chr2	147402992	147403608	-94789921	-	L1PA16	LINE	L1	-9	6157	5523	2
chr2	147477319	147477320	chunk0102_166_1	5.6425	AR_DHT_Control	chr2	147477307	147478169	-94715360	-	Tigger3	DNA	TcMar-Tigger	0	3029	2162	2
chr2	147681622	147681623	chunk0102_190_1	23.43294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	147681537	147681671	-94511858	+	L2a	LINE	L2	3279	3426	0	2
chr2	147822314	147822315	chunk0102_195_1	8.27376	AR_DHT_Control	chr2	147821381	147824168	-94369361	+	L1MB7	LINE	L1	17	3322	-3322	2
chr2	147858790	147858791	chunk0102_197_1	71.279	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	147858688	147858987	-94334542	-	MER58B	DNA	hAT-Charlie	-2	339	2	2
chr2	147996770	147996771	chunk0102_201_1	8.27376	AR_DHT_Control	chr2	147996330	147997373	-94196156	+	L1MC2	LINE	L1	5036	6128	-216	2
chr2	148017176	148017177	chunk0102_202_1	69.9078	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	148017139	148017390	-94176139	-	Charlie5	DNA	hAT-Charlie	-1	2623	2329	2
chr2	148244704	148244705	chunk0102_207_1	18.71792	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	148244614	148244727	-93948802	-	L2a	LINE	L2	-4	3422	3305	2
chr2	148254938	148254939	chunk0102_208_1	5.13456	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	148253985	148259246	-93934283	-	HERVL18-int	LTR	ERVL	0	6047	794	2
chr2	148416651	148416652	chunk0102_209_1	15.77341	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	148416604	148417129	-93776400	-	L1PB3	LINE	L1	-5	6298	5673	2
chr2	148593883	148593884	chunk0102_218_1	15.35326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	148593813	148594015	-93599514	-	AluY	SINE	Alu	0	311	101	2
chr2	148656707	148656708	chunk0102_226_1	49.66308	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	148656569	148656711	-93536818	+	L2c	LINE	L2	3246	3384	-3	2
chr2	148656707	148656708	chunk0102_226_1	49.66308	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	148656681	148656834	-93536695	-	L2c	LINE	L2	-4	3383	3235	2
chr2	148705585	148705586	chunk0102_227_1	16.4778	AR_DHT_Control	chr2	148705457	148710905	-93482624	+	L1PA5	LINE	L1	778	6225	-102	2
chr2	148713769	148713770	chunk0102_228_1	7.36432	AR_DHT_Control	chr2	148713038	148713900	-93479629	+	Tigger3b	DNA	TcMar-Tigger	213	1206	-25	2
chr2	148720057	148720058	chunk0102_229_1	9.21264	AR_DHT_Control	chr2	148715332	148720938	-93472591	-	L1PA11	LINE	L1	-1110	6471	7	2
chr2	149005873	149005874	chunk0102_241_1	25.32251	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	149005870	149006070	-93187459	-	MIRc	SINE	MIR	-37	231	22	2
chr2	149232218	149232219	chunk0102_253_1	16.2797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	149231330	149232703	-92960826	+	L1PB1	LINE	L1	4364	5780	-351	2
chr2	149272700	149272701	chunk0102_254_1	10.244	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	149272650	149272913	-92920616	+	L2a	LINE	L2	3123	3421	-5	2
chr2	149940029	149940030	chunk0102_266_1	13.1127	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	149939850	149940037	-92253492	-	L1MC4	LINE	L1	-4433	2063	1868	2
chr2	150043143	150043144	chunk0102_267_1	5.46037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	150042854	150043195	-92150334	+	L3	LINE	CR1	3413	3775	-324	2
chr2	150574827	150574828	chunk0102_291_1	75.7276	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	150574796	150574944	-91618585	-	L2a	LINE	L2	-11	3415	3264	2
chr2	150605863	150605864	chunk0102_292_1	45.8772	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	150605678	150605956	-91587573	+	Tigger3a	DNA	TcMar-Tigger	80	347	-1	2
chr2	150836692	150836693	chunk0102_301_1	10.97148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	150836686	150836736	-91356793	-	L2c	LINE	L2	-10	3377	3324	2
chr2	150847694	150847695	chunk0102_302_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	150847662	150847701	-91345828	+	(TG)n	Simple_repeat	Simple_repeat	1	41	0	2
chr2	150860508	150860509	chunk0102_303_1	19.13291	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	150860239	150860697	-91332832	+	MER54A	LTR	ERVL	421	888	-13	2
chr2	151030209	151030210	chunk0102_308_1	13.2288	AR_DHT_Control	chr2	151030079	151030591	-91162938	+	Ricksha_c	DNA	MULE-MuDR	1296	1828	-220	2
chr2	151241495	151241496	chunk0102_312_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	151241469	151241788	-90951741	-	Tigger17a	DNA	TcMar-Tigger	-24	630	310	2
chr2	151286157	151286158	chunk0102_316_1	21.64896	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	151286016	151286442	-90907087	+	L1MC4	LINE	L1	7239	7695	-347	2
chr2	151849889	151849890	chunk0102_330_1	9.98154	AR_DHT_Control	chr2	151849854	151850070	-90343459	+	MER58A	DNA	hAT-Charlie	1	223	-1	2
chr2	152298829	152298830	chunk0102_340_1	6.86378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	152298256	152300722	-89892807	-	L1MC1	LINE	L1	-5	6328	3834	2
chr2	152299601	152299602	chunk0102_341_1	86.9901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	152298256	152300722	-89892807	-	L1MC1	LINE	L1	-5	6328	3834	2
chr2	152781240	152781241	chunk0102_367_1	35.90726	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	152781079	152781637	-89411892	-	ERVL-B4-int	LTR	ERVL	-1139	4575	4009	2
chr2	153495845	153495846	chunk0102_375_1	10.8743	AR_DHT_Control	chr2	153495325	153495850	-88697679	+	L1ME2	LINE	L1	5608	6103	-61	2
chr2	154414112	154414113	chunk0102_381_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	154413987	154414208	-87779321	-	L1M5	LINE	L1	-325	5799	5572	2
chr2	154588035	154588036	chunk0102_385_1	100.2721	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	154587685	154588102	-87605427	-	MLT2B1	LTR	ERVL	-40	480	1	2
chr2	154834028	154834029	chunk0102_397_1	73.1694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	154833373	154834384	-87359145	-	L1MC2	LINE	L1	-9	6335	5309	2
chr2	156059111	156059112	chunk0102_404_1	48.3799	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	156059082	156059171	-86134358	-	MIRc	SINE	MIR	-165	103	9	2
chr2	156566383	156566384	chunk0102_414_1	10.6722	AR_DHT_Control	chr2	156566198	156567433	-85626096	-	L1MB3	LINE	L1	-2	6181	4918	2
chr2	156568301	156568302	chunk0102_415_1	7.17788	AR_DHT_Control	chr2	156568071	156568330	-85625199	+	MIRb	SINE	MIR	3	247	-21	2
chr2	156781986	156781987	chunk0102_416_1	18.3379	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	156780964	156782956	-85410573	+	L1PB1	LINE	L1	4157	6151	0	2
chr2	156887365	156887366	chunk0102_420_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	156887315	156887442	-85306087	-	MIR1_Amn	SINE	MIR	-73	157	28	2
chr2	157038035	157038036	chunk0102_422_1	17.97483	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	157037974	157038133	-85155396	-	MamRep605	LTR?	LTR?	-122	727	563	2
chr2	157801523	157801524	chunk0102_437_1	34.25191	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	157801318	157801681	-84391848	+	Charlie7	DNA	hAT-Charlie	331	720	-1892	2
chr2	157849680	157849681	chunk0102_440_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	157849359	157849930	-84343599	+	MER99	DNA	hAT?	77	687	-144	2
chr2	157931771	157931772	chunk0102_442_1	18.3546	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	157931760	157931782	-84261747	+	(AC)n	Simple_repeat	Simple_repeat	1	22	0	2
chr2	157947047	157947048	chunk0102_444_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	157946988	157947067	-84246462	-	L1M5	LINE	L1	-1130	5016	4932	2
chr2	158404020	158404021	chunk0102_457_1	4.83532	AR_DHT_Control	chr2	158403933	158404142	-83789387	+	MIRb	SINE	MIR	50	252	-16	2
chr2	158619662	158619663	chunk0102_459_1	11.1716	AR_DHT_Control	chr2	158619625	158619687	-83573842	+	MIRb	SINE	MIR	206	268	0	2
chr2	158694173	158694174	chunk0102_462_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	158694047	158694460	-83499069	-	Zaphod	DNA	hAT-Tip100	0	4031	3582	2
chr2	158803109	158803110	chunk0103_4_1	75.6823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	158802854	158803279	-83390250	+	L1ME4b	LINE	L1	438	862	-30	2
chr2	158917817	158917818	chunk0103_10_1	35.91713	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	158917738	158917844	-83275685	+	L1MD2	LINE	L1	6019	6132	-227	2
chr2	158997671	158997672	chunk0103_16_1	7.80833	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	158997008	158998004	-83195525	+	L1MC3	LINE	L1	6190	7286	-499	2
chr2	159024960	159024961	chunk0103_20_1	16.0839	AR_DHT_Control	chr2	159024765	159025041	-83168488	+	Tigger3c	DNA	TcMar-Tigger	316	602	0	2
chr2	159041157	159041158	chunk0103_21_1	18.4237	AR_DHT_Control	chr2	159040227	159041920	-83151609	-	L1PA6	LINE	L1	-4487	1697	4	2
chr2	159063102	159063103	chunk0103_28_1	105.2519	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	159062999	159063256	-83130273	-	MamRep605	LTR?	LTR?	-216	633	370	2
chr2	159358826	159358827	chunk0103_46_1	12.58697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	159355694	159362150	-82831379	+	L1PA7	LINE	L1	323	6784	0	2
chr2	159400065	159400066	chunk0103_48_1	32.16631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	159399725	159400117	-82793412	-	Tigger15a	DNA	TcMar-Tigger	-4	711	301	2
chr2	159536873	159536874	chunk0103_53_1	8.08101	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	159536818	159536943	-82656586	+	Charlie21a	DNA	hAT-Charlie	710	849	-364	2
chr2	159595875	159595876	chunk0103_54_1	40.676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	159595660	159596050	-82597479	+	MER57B1	LTR	ERV1	10	401	0	2
chr2	159864045	159864046	chunk0103_61_1	63.10981	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	159863862	159864124	-82329405	+	Tigger3a	DNA	TcMar-Tigger	55	348	0	2
chr2	159908073	159908074	chunk0103_65_1	175.3349	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	159907931	159908208	-82285321	+	L2c	LINE	L2	3110	3387	0	2
chr2	160220619	160220620	chunk0103_72_1	116.126	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	160220489	160221104	-81972425	+	LTR50	LTR	ERVL	6	794	-1	2
chr2	160454339	160454340	chunk0103_75_1	54.63592	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	160454291	160454821	-81738708	-	L2c	LINE	L2	0	3387	2796	2
chr2	160576295	160576296	chunk0103_78_1	45.33451	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	160576094	160576457	-81617072	+	X1_LINE	LINE	CR1	238	606	-39	2
chr2	160793710	160793711	chunk0103_87_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	160793449	160794624	-81398905	+	L1M4b	LINE	L1	1717	2961	-3906	2
chr2	161278825	161278826	chunk0103_99_1	15.13612	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr2	161278580	161278835	-80914694	-	L1MB8	LINE	L1	-108	6070	5839	2
chr2	161280305	161280306	chunk0103_101_1	74.9188	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	161280160	161280465	-80913064	-	MER21B	LTR	ERVL	-132	799	484	2
chr2	161314902	161314903	chunk0103_103_1	177.1347	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	161314382	161314990	-80878539	-	L1MB5	LINE	L1	-8	6166	5574	2
chr2	161573589	161573590	chunk0103_115_1	20.30192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	161573383	161573897	-80619632	-	L1PA15	LINE	L1	0	6556	6059	2
chr2	161584305	161584306	chunk0103_116_1	5.64367	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	161584241	161584693	-80608836	+	L1ME4a	LINE	L1	5324	5834	-290	2
chr2	161617294	161617295	chunk0103_117_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	161617200	161617432	-80576097	+	MIR	SINE	MIR	5	250	-12	2
chr2	161741563	161741564	chunk0103_120_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	161741338	161742406	-80451123	-	L1MA3	LINE	L1	0	6305	5571	2
chr2	161933729	161933730	chunk0103_126_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	161933698	161934017	-80259512	-	L1MA8	LINE	L1	-508	5783	5488	2
chr2	162049581	162049582	chunk0103_131_1	67.1722	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162049258	162049663	-80143866	+	L1PA11	LINE	L1	5774	6174	0	2
chr2	162065815	162065816	chunk0103_133_1	9.38217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162065777	162065957	-80127572	+	L2c	LINE	L2	3191	3373	-14	2
chr2	162084802	162084803	chunk0103_136_1	194.5576	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr2	162084546	162087396	-80106133	-	MER34-int	LTR	ERV1	0	8207	5265	2
chr2	162089435	162089436	chunk0103_138_1	89.589	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	162089385	162089474	-80104055	+	MER89	LTR	ERV1	1	89	-470	2
chr2	162125580	162125581	chunk0103_143_1	17.9161	AR_DHT_Control	chr2	162125240	162125701	-80067828	+	L2c	LINE	L2	2919	3386	-1	2
chr2	162138404	162138405	chunk0103_144_1	9.21264	AR_DHT_Control	chr2	162138404	162138707	-80054822	+	Tigger17c	DNA	TcMar-Tigger	1	303	-885	2
chr2	162155068	162155069	chunk0103_145_1	4.77556	AR_DHT_Control	chr2	162154799	162155425	-80038104	+	L1ME4b	LINE	L1	208	882	-10	2
chr2	162290627	162290628	chunk0103_154_1	18.34391	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162290544	162290636	-79902893	-	L2c	LINE	L2	0	3387	3281	2
chr2	162317220	162317221	chunk0103_157_1	15.77987	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162317105	162317371	-79876158	-	MER58B	DNA	hAT-Charlie	0	341	1	2
chr2	162596704	162596705	chunk0103_165_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162595433	162597841	-79595688	+	L1MA7	LINE	L1	3851	6289	-2	2
chr2	162658532	162658533	chunk0103_168_1	7.36432	AR_DHT_Control	chr2	162658191	162659340	-79534189	-	L1MC1	LINE	L1	-1195	4951	3792	2
chr2	162733032	162733033	chunk0103_171_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	162732899	162733039	-79460490	+	Charlie8	DNA	hAT-Charlie	38	180	-2248	2
chr2	163037919	163037920	chunk0103_172_1	12.25031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	163037914	163037992	-79155537	+	MLT1K	LTR	ERVL-MaLR	510	587	-8	2
chr2	163123683	163123684	chunk0103_175_1	10.1791	AR_DHT_Control	chr2	163123466	163123837	-79069692	-	L1MCb	LINE	L1	-4923	1122	723	2
chr2	163159045	163159046	chunk0103_176_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	163157988	163159154	-79034375	-	Tigger3b	DNA	TcMar-Tigger	-4	1227	1	2
chr2	163436760	163436761	chunk0103_188_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	163436695	163437409	-78756120	-	Cheshire	DNA	hAT-Charlie	-1654	766	64	2
chr2	163563895	163563896	chunk0103_190_1	41.48336	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	163563869	163564200	-78629329	-	Tigger3a	DNA	TcMar-Tigger	0	348	8	2
chr2	163667810	163667811	chunk0103_196_1	76.9031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	163667468	163667930	-78525599	+	L2c	LINE	L2	2918	3387	0	2
chr2	163677064	163677065	chunk0103_201_1	218.1394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	163676992	163677227	-78516302	+	Tigger19b	DNA	TcMar-Tigger	64	314	-236	2
chr2	163867339	163867340	chunk0103_210_1	5.41601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	163866387	163867606	-78325923	+	L1PA13	LINE	L1	4186	5408	-755	2
chr2	164318619	164318620	chunk0103_221_1	31.623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	164318581	164320012	-77873517	-	L1MC3	LINE	L1	-9	7776	6353	2
chr2	164407626	164407627	chunk0103_223_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	164406321	164408319	-77785210	+	L1MC3	LINE	L1	5806	7778	-7	2
chr2	164514731	164514732	chunk0103_224_1	8.27376	AR_DHT_Control	chr2	164514193	164516347	-77677182	+	L1PB1	LINE	L1	263	2438	-4425	2
chr2	164520537	164520538	chunk0103_225_1	13.0353	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	164517382	164521517	-77672012	+	L1PB1	LINE	L1	2702	6863	-4	2
chr2	164551744	164551745	chunk0103_227_1	52.5381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	164551579	164551814	-77641715	+	L2c	LINE	L2	3007	3250	-125	2
chr2	164956681	164956682	chunk0103_249_1	32.03168	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	164956668	164957144	-77236385	-	L1ME3Cz	LINE	L1	-87	910	341	2
chr2	165337060	165337061	chunk0103_254_1	28.5194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	165336888	165337913	-76855616	+	L1MEf	LINE	L1	666	1730	-4512	2
chr2	165369225	165369226	chunk0103_256_1	6.9031	AR_DHT_Control	chr2	165368942	165369228	-76824301	-	AluSz6	SINE	Alu	-25	287	1	2
chr2	165417845	165417846	chunk0103_258_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	165417293	165417986	-76775543	-	L1PB1	LINE	L1	-6170	693	3	2
chr2	165557331	165557332	chunk0103_262_1	42.9022	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	165557061	165557407	-76636122	+	MER58B	DNA	hAT-Charlie	1	341	0	2
chr2	165584258	165584259	chunk0103_266_1	18.8221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	165583831	165584355	-76609174	-	MER41C	LTR	ERV1	0	521	1	2
chr2	165819778	165819779	chunk0103_274_1	120.2601	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	165819377	165819934	-76373595	+	L1ME4b	LINE	L1	363	892	0	2
chr2	165896680	165896681	chunk0103_278_1	8.27376	AR_DHT_Control	chr2	165896540	165896740	-76296789	-	L2a	LINE	L2	-204	3222	3017	2
chr2	166031605	166031606	chunk0103_288_1	7.58612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	166031568	166031687	-76161842	+	L3	LINE	CR1	1123	1238	-2861	2
chr2	166130316	166130317	chunk0103_290_1	8.64577	AR_DHT_Control	chr2	166130268	166130380	-76063149	-	L2a	LINE	L2	-1	3425	3307	2
chr2	166599777	166599778	chunk0103_299_1	8.75738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	166599307	166601703	-75591826	+	L1MA3	LINE	L1	3871	6305	0	2
chr2	166655193	166655194	chunk0103_301_1	20.6297	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	166655118	166655978	-75537551	-	MER4D1	LTR	ERV1	-9	891	1	2
chr2	166812317	166812318	chunk0103_304_1	52.1884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	166812130	166813008	-75380521	+	L1MC3	LINE	L1	6762	7766	-19	2
chr2	166853313	166853314	chunk0103_306_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	166853009	166853725	-75339804	+	L1MA8	LINE	L1	4867	5574	-717	2
chr2	167789464	167789465	chunk0103_331_1	14.09727	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	167789306	167789506	-74404023	+	MIRb	SINE	MIR	29	236	-32	2
chr2	168039673	168039674	chunk0103_340_1	9.21264	AR_DHT_Control	chr2	168039622	168039837	-74153692	+	L1ME1	LINE	L1	5963	6178	-1	2
chr2	168058214	168058215	chunk0103_341_1	10.8162	AR_DHT_Control	chr2	168057607	168059181	-74134348	+	L2a	LINE	L2	1338	3155	-271	2
chr2	168060014	168060015	chunk0103_342_1	8.75677	AR_DHT_Control	chr2	168059773	168060019	-74133510	+	L2a	LINE	L2	3156	3426	0	2
chr2	168066381	168066382	chunk0103_344_1	16.31902	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	168066219	168066382	-74127147	+	L1ME2z	LINE	L1	6208	6393	-51	2
chr2	168286866	168286867	chunk0103_366_1	20.12056	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	168286241	168287676	-73905853	-	LTR37-int	LTR	ERV1	0	4060	2500	2
chr2	168478348	168478349	chunk0103_367_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	168478266	168478508	-73715021	-	HAL1	LINE	L1	-2000	507	252	2
chr2	168510491	168510492	chunk0103_370_1	118.6017	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	168510288	168510613	-73682916	+	Tigger3c	DNA	TcMar-Tigger	255	602	0	2
chr2	168527075	168527076	chunk0103_372_1	72.6332	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	168526960	168527181	-73666348	+	LTR50	LTR	ERVL	1	255	-540	2
chr2	168559313	168559314	chunk0103_374_1	24.56499	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	168559310	168559693	-73633836	-	MLT1A0	LTR	ERVL-MaLR	0	365	1	2
chr2	168627610	168627611	chunk0103_376_1	8.24382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	168627298	168627874	-73565655	-	L1M6	LINE	L1	-4599	1897	1283	2
chr2	168678792	168678793	chunk0103_383_1	36.45511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	168678787	168679466	-73514063	+	L1MA6	LINE	L1	5598	6295	-5	2
chr2	168999387	168999388	chunk0103_393_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	168999358	169000000	-73193529	-	L1MD1	LINE	L1	-107	6135	5479	2
chr2	169065671	169065672	chunk0103_402_1	50.1396	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169065657	169065983	-73127546	-	L1M5	LINE	L1	-2020	5862	5509	2
chr2	169085932	169085933	chunk0103_404_1	9.38051	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169085851	169088606	-73104923	-	L1MA3	LINE	L1	-4790	2775	1	2
chr2	169127490	169127491	chunk0103_405_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169127417	169127549	-73065980	+	FLAM_A	SINE	Alu	1	132	-10	2
chr2	169305901	169305902	chunk0103_407_1	14.2911	AR_DHT_Control	chr2	169305711	169306080	-72887449	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	2
chr2	169341186	169341187	chunk0103_408_1	13.6808	AR_DHT_Control	chr2	169340878	169341235	-72852294	-	L2a	LINE	L2	-8	3418	2998	2
chr2	169415378	169415379	chunk0103_410_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	169415197	169415504	-72778025	-	MLT1G3	LTR	ERVL-MaLR	-104	491	176	2
chr2	169441875	169441876	chunk0103_411_1	9.21264	AR_DHT_Control	chr2	169441039	169441914	-72751615	+	L1ME1	LINE	L1	73	988	-5559	2
chr2	169566043	169566044	chunk0103_415_1	14.53202	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169565561	169566165	-72627364	-	L1MA1	LINE	L1	-520	5782	5168	2
chr2	169665680	169665681	chunk0103_417_1	9.21264	AR_DHT_Control	chr2	169665502	169665916	-72527613	-	MER83	LTR	ERV1	0	448	1	2
chr2	169695953	169695954	chunk0103_419_1	15.75268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169695653	169696042	-72497487	-	LTR40b	LTR	ERVL	-2	460	1	2
chr2	169715595	169715596	chunk0103_420_1	18.4752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169714793	169717187	-72476342	-	HERVL18-int	LTR	ERVL	-3595	2452	2	2
chr2	169716825	169716826	chunk0103_422_1	38.20825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169714793	169717187	-72476342	-	HERVL18-int	LTR	ERVL	-3595	2452	2	2
chr2	169764197	169764198	chunk0103_424_1	19.87834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169764089	169764272	-72429257	-	L1MC5	LINE	L1	-802	8502	8322	2
chr2	169852411	169852412	chunk0103_427_1	22.74	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169852367	169852549	-72340980	+	MER58A	DNA	hAT-Charlie	3	201	-23	2
chr2	169922502	169922503	chunk0103_431_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	169922435	169922795	-72270734	-	L1MB2	LINE	L1	-2	6169	5810	2
chr2	169951473	169951474	chunk0103_435_1	22.92281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169951446	169951576	-72241953	-	L2c	LINE	L2	-78	3309	3180	2
chr2	169964925	169964926	chunk0103_436_1	23.6592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	169964780	169964975	-72228554	-	LTR101_Mam	LTR	ERVL	0	829	612	2
chr2	170003566	170003567	chunk0103_438_1	257.695	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	170003465	170003641	-72189888	-	L2c	LINE	L2	-4	3383	3204	2
chr2	170090441	170090442	chunk0103_440_1	18.79485	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	170090376	170090458	-72103071	+	L1MEg	LINE	L1	625	713	-5529	2
chr2	170096025	170096026	chunk0103_441_1	24.23798	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	170095770	170096134	-72097395	+	MLT1I	LTR	ERVL-MaLR	1	409	-2	2
chr2	170098809	170098810	chunk0103_443_1	7.57442	AR_DHT_Control	chr2	170098705	170098834	-72094695	+	L1MD2	LINE	L1	6026	6156	-203	2
chr2	170148237	170148238	chunk0103_446_1	8.09329	AR_DHT_Control	chr2	170148196	170148411	-72045118	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr2	170218635	170218636	chunk0103_447_1	69.3006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	170218245	170218661	-71974868	-	Charlie29a	DNA	hAT-Charlie	-7	712	292	2
chr2	170255336	170255337	chunk0103_451_1	41.07155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	170253895	170260728	-71932801	+	L1PA16	LINE	L1	1	8160	-1	2
chr2	170294018	170294019	chunk0103_452_1	29.2834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	170293819	170294126	-71899403	-	L1MD2	LINE	L1	-6220	327	21	2
chr2	170345893	170345894	chunk0104_9_1	9.21264	AR_DHT_Control	chr2	170345660	170346066	-71847463	+	MLT1C	LTR	ERVL-MaLR	1	467	0	2
chr2	170456257	170456258	chunk0104_13_1	51.2834	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	170455954	170456565	-71736964	-	LTR48B	LTR	ERV1	0	644	1	2
chr2	170564633	170564634	chunk0104_19_1	12.1095	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	170564606	170564705	-71628824	+	L1M5	LINE	L1	5536	5635	-489	2
chr2	170739618	170739619	chunk0104_29_1	47.2126	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	170739475	170739698	-71453831	+	MER113	DNA	hAT-Charlie	295	521	0	2
chr2	171003826	171003827	chunk0104_35_1	68.8193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171003303	171003961	-71189568	-	Tigger2	DNA	TcMar-Tigger	-1885	833	154	2
chr2	171071885	171071886	chunk0104_38_1	16.0839	AR_DHT_Control	chr2	171071586	171072332	-71121197	-	L1MA3	LINE	L1	-1004	5142	4426	2
chr2	171112694	171112695	chunk0104_39_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	171112249	171113247	-71080282	+	L1M5	LINE	L1	3772	4845	-1301	2
chr2	171141534	171141535	chunk0104_41_1	23.16161	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171141430	171142881	-71050648	+	L1MEg	LINE	L1	1267	2775	-3371	2
chr2	171142339	171142340	chunk0104_43_1	24.92724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171141430	171142881	-71050648	+	L1MEg	LINE	L1	1267	2775	-3371	2
chr2	171154648	171154649	chunk0104_44_1	9.14794	AR_DHT_Control	chr2	171154541	171154688	-71038841	-	MIRc	SINE	MIR	-48	160	2	2
chr2	171348420	171348421	chunk0104_51_1	17.6729	AR_DHT_Control	chr2	171348258	171348480	-70845049	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr2	171417486	171417487	chunk0104_56_1	13.2288	AR_DHT_Control	chr2	171417416	171417664	-70775865	-	MIR	SINE	MIR	-10	252	1	2
chr2	171428839	171428840	chunk0104_57_1	67.9377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171428559	171428950	-70764579	-	L2c	LINE	L2	0	3387	2925	2
chr2	171552989	171552990	chunk0104_60_1	25.06745	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171552926	171553139	-70640390	+	L1ME3G	LINE	L1	418	652	-272	2
chr2	171572279	171572280	chunk0104_63_1	28.85122	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	171572022	171572377	-70621152	-	LTR47B2	LTR	ERVL	0	434	1	2
chr2	171863953	171863954	chunk0104_79_1	24.67913	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171863951	171864052	-70329477	-	L2a	LINE	L2	-12	3414	3311	2
chr2	171946199	171946200	chunk0104_82_1	35.9198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	171946105	171946269	-70247260	+	L1MC	LINE	L1	5576	5747	-2135	2
chr2	171956636	171956637	chunk0104_83_1	11.1147	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	171956549	171957669	-70235860	+	MLT1D-int	LTR	ERVL-MaLR	290	1357	-14	2
chr2	172021759	172021760	chunk0104_86_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	172021667	172021763	-70171766	+	LFSINE_Vert	SINE	tRNA	308	403	-56	2
chr2	172270125	172270126	chunk0104_94_1	20.16759	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	172264705	172270864	-69922665	-	L1PA6	LINE	L1	-1	6153	6	2
chr2	172282081	172282082	chunk0104_95_1	9.56998	AR_DHT_Control	chr2	172282026	172282450	-69911079	-	Tigger3	DNA	TcMar-Tigger	-6	3023	2586	2
chr2	172378828	172378829	chunk0104_99_1	9.88073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	172378663	172379015	-69814514	-	LTR90A	LTR	LTR	-583	393	22	2
chr2	172459804	172459805	chunk0104_101_1	9.74315	AR_DHT_Control	chr2	172459781	172459887	-69733642	+	HAL1	LINE	L1	1800	1903	-604	2
chr2	172615028	172615029	chunk0104_104_1	25.1915	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	172615024	172615204	-69578325	+	LTR28	LTR	ERV1	837	1020	0	2
chr2	172645091	172645092	chunk0104_106_1	28.4603	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	172645016	172645205	-69548324	+	MER63A	DNA	hAT-Blackjack	1	210	0	2
chr2	172677428	172677429	chunk0104_107_1	10.8679	AR_DHT_Control	chr2	172677324	172677494	-69516035	-	HAL1	LINE	L1	-755	1752	1549	2
chr2	172722668	172722669	chunk0104_108_1	14.9085	AR_DHT_Control	chr2	172722520	172722714	-69470815	+	MER117	DNA	hAT-Charlie	1	197	0	2
chr2	172799217	172799218	chunk0104_109_1	49.3223	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	172799167	172799389	-69394140	-	MIR	SINE	MIR	-30	232	13	2
chr2	172947218	172947219	chunk0104_119_1	17.3852	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	172947045	172947259	-69246270	+	Helitron1Na_Mam	RC	Helitron	826	1062	0	2
chr2	173028887	173028888	chunk0104_121_1	70.9228	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	173028785	173029006	-69164523	-	MIRc	SINE	MIR	-18	250	20	2
chr2	173088331	173088332	chunk0104_127_1	11.872	AR_DHT_Control	chr2	173087460	173088637	-69104892	+	HAL1	LINE	L1	1283	2469	-38	2
chr2	173589795	173589796	chunk0104_144_1	30.32462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	173589680	173589890	-68603639	+	MIR	SINE	MIR	29	260	-2	2
chr2	174058084	174058085	chunk0104_156_1	52.0938	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	174057964	174058159	-68135370	+	L1M5	LINE	L1	5571	5777	-347	2
chr2	174156209	174156210	chunk0104_162_1	170.5835	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	174156169	174156352	-68037177	-	MER20	DNA	hAT-Charlie	0	219	44	2
chr2	174175005	174175006	chunk0104_164_1	48.0367	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	174173620	174176193	-68017336	+	L1ME1	LINE	L1	3275	6334	-18	2
chr2	174458393	174458394	chunk0104_167_1	47.928	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	174458359	174458620	-67734909	+	L2	LINE	L2	2416	2700	-719	2
chr2	174536125	174536126	chunk0104_171_1	21.21352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	174536077	174536339	-67657190	-	L1ME3	LINE	L1	-2	6160	5860	2
chr2	174569970	174569971	chunk0104_173_1	60.88065	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	174569902	174570455	-67623074	+	L1ME4a	LINE	L1	5524	6124	0	2
chr2	174606464	174606465	chunk0104_176_1	21.6772	AR_DHT_Control	chr2	174606169	174606487	-67587042	-	MER33	DNA	hAT-Charlie	0	324	2	2
chr2	175226149	175226150	chunk0104_193_1	16.319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	175225968	175226259	-66967270	-	L1MC5	LINE	L1	-984	8320	8016	2
chr2	175829381	175829382	chunk0104_203_1	15.8088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	175828425	175829671	-66363858	+	L1ME1	LINE	L1	4891	6151	-28	2
chr2	175913953	175913954	chunk0104_206_1	9.21264	AR_DHT_Control	chr2	175912136	175914757	-66278772	-	L1P3	LINE	L1	-3831	2630	8	2
chr2	175948337	175948338	chunk0104_210_1	20.30994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	175948327	175948517	-66245012	+	MER58A	DNA	hAT-Charlie	1	213	-11	2
chr2	176317419	176317420	chunk0104_216_1	12.74736	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	176317371	176318222	-65875307	-	HAL1	LINE	L1	-1536	971	6	2
chr2	176346769	176346770	chunk0104_218_1	15.63437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	176346353	176347012	-65846517	-	L1ME3E	LINE	L1	-97	6238	5525	2
chr2	176556539	176556540	chunk0104_236_1	86.27399	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	176556527	176556690	-65636839	+	MIR3	SINE	MIR	1	181	-27	2
chr2	177394384	177394385	chunk0104_250_1	12.3053	AR_DHT_Control	chr2	177394131	177394524	-64799005	-	L2c	LINE	L2	-4	3383	2930	2
chr2	177797629	177797630	chunk0104_265_1	60.7544	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	177797556	177797785	-64395744	-	MARNA	DNA	TcMar-Mariner	-20	566	305	2
chr2	178110885	178110886	chunk0104_272_1	41.97206	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	178110840	178110924	-64082605	+	L2b	LINE	L2	3278	3362	-13	2
chr2	178125311	178125312	chunk0104_275_1	152.2432	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	178125190	178125486	-64068043	-	L2c	LINE	L2	-21	3405	3075	2
chr2	178193661	178193662	chunk0104_278_1	41.4341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	178193604	178193720	-63999809	-	MamRTE1	LINE	RTE-BovB	-1613	2199	2063	2
chr2	178252373	178252374	chunk0104_279_1	101.0958	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	178252254	178252465	-63941064	-	MER58A	DNA	hAT-Charlie	0	224	11	2
chr2	178407297	178407298	chunk0104_289_1	19.97195	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	178407017	178407394	-63786135	-	MER89	LTR	ERV1	-3	556	166	2
chr2	178438537	178438538	chunk0104_291_1	34.3933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	178438360	178438681	-63754848	-	L1M5	LINE	L1	-1207	4939	4611	2
chr2	179214711	179214712	chunk0104_311_1	21.1963	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	179212023	179218140	-62975389	+	L1PA6	LINE	L1	174	6325	-2	2
chr2	179233235	179233236	chunk0104_316_1	51.5836	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	179232527	179233442	-62960087	+	L1MC4a	LINE	L1	5660	6585	-1297	2
chr2	179279314	179279315	chunk0104_320_1	7.36432	AR_DHT_Control	chr2	179278770	179279420	-62914109	+	L1MA2	LINE	L1	2455	3122	-4443	2
chr2	179303199	179303200	chunk0104_322_1	125.72994	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	179302995	179303326	-62890203	-	Tigger3a	DNA	TcMar-Tigger	-1	347	17	2
chr2	179379430	179379431	chunk0104_323_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	179378613	179379572	-62813957	+	L2a	LINE	L2	2324	3422	-4	2
chr2	179417703	179417704	chunk0104_324_1	4.83532	AR_DHT_Control	chr2	179417345	179417749	-62775780	+	MLT1H2	LTR	ERVL-MaLR	79	676	-4	2
chr2	179612333	179612334	chunk0104_337_1	7.97574	AR_DHT_Control	chr2	179611953	179614303	-62579226	-	L1MA3	LINE	L1	-5158	2407	17	2
chr2	179801387	179801388	chunk0104_343_1	93.6199	AR_DHT_Control	chr2	179801387	179801431	-62392098	+	(TGTACTTCC)n	Simple_repeat	Simple_repeat	1	44	0	2
chr2	179806284	179806285	chunk0104_344_1	25.6264	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	179805861	179806308	-62387221	+	L1M5	LINE	L1	4905	5395	-778	2
chr2	179900888	179900889	chunk0104_349_1	12.2633	AR_DHT_Control	chr2	179899816	179900990	-62292539	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	2
chr2	179933003	179933004	chunk0104_351_1	49.53874	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	179932821	179933217	-62260312	-	MLT1H2	LTR	ERVL-MaLR	0	489	97	2
chr2	180001821	180001822	chunk0104_363_1	38.7717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	180001629	180002205	-62191324	+	L2a	LINE	L2	1917	2493	-926	2
chr2	180034415	180034416	chunk0104_365_1	8.27376	AR_DHT_Control	chr2	180032932	180035021	-62158508	-	L1MA2	LINE	L1	-2452	2146	9	2
chr2	180314381	180314382	chunk0104_380_1	8.02791	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180314378	180314624	-61878905	-	MIR	SINE	MIR	-1	261	7	2
chr2	180328918	180328919	chunk0104_381_1	60.3346	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	180328768	180334319	-61859210	+	L1MA2	LINE	L1	2844	7722	-1	2
chr2	180354086	180354087	chunk0104_383_1	22.3688	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180353987	180358443	-61835086	-	L1PBb	LINE	L1	-698	6172	1670	2
chr2	180356865	180356866	chunk0104_384_1	119.9852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180353987	180358443	-61835086	-	L1PBb	LINE	L1	-698	6172	1670	2
chr2	180375289	180375290	chunk0104_392_1	49.1594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180375128	180375304	-61818225	-	Charlie16a	DNA	hAT-Charlie	-89	253	62	2
chr2	180558739	180558740	chunk0104_395_1	14.9085	AR_DHT_Control	chr2	180557998	180558930	-61634599	+	L1PA10	LINE	L1	5400	6353	0	2
chr2	180609649	180609650	chunk0104_397_1	9.90105	AR_DHT_Control	chr2	180609563	180609820	-61583709	+	MIR	SINE	MIR	1	249	-13	2
chr2	180672634	180672635	chunk0104_402_1	14.7408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	180672597	180672822	-61520707	-	MIR	SINE	MIR	-10	252	15	2
chr2	180696267	180696268	chunk0104_404_1	17.80865	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180696103	180696420	-61497109	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	2
chr2	180715379	180715380	chunk0104_405_1	103.92	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	180715262	180715400	-61478129	-	L2a	LINE	L2	-1	3425	3304	2
chr2	180722778	180722779	chunk0104_409_1	15.5424	AR_DHT_Control	chr2	180722437	180722803	-61470726	-	MLT1K	LTR	ERVL-MaLR	-18	577	189	2
chr2	180726367	180726368	chunk0104_411_1	14.86586	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	180726122	180726658	-61466871	+	MER77	LTR	ERVL	40	704	-234	2
chr2	180731368	180731369	chunk0104_412_1	5.73594	AR_DHT_Control	chr2	180731203	180731639	-61461890	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	2
chr2	180787821	180787822	chunk0104_415_1	76.5991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	180786639	180788235	-61405294	+	L1MD1	LINE	L1	3998	6152	-90	2
chr2	180794748	180794749	chunk0104_417_1	29.63479	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180794726	180795121	-61398408	+	L1ME1	LINE	L1	4201	4620	-1526	2
chr2	180867325	180867326	chunk0104_421_1	35.7074	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	180867136	180867516	-61326013	+	L1M1	LINE	L1	2552	3229	-4337	2
chr2	180908500	180908501	chunk0104_423_1	11.8271	AR_DHT_Control	chr2	180908458	180908837	-61284692	-	L2a	LINE	L2	-2	3424	3059	2
chr2	180935007	180935008	chunk0104_424_1	75.24027	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	180934250	180935112	-61258417	-	L3	LINE	CR1	-1	4098	3135	2
chr2	181036646	181036647	chunk0104_432_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	181036366	181036973	-61156556	+	MER6A	DNA	TcMar-Tigger	1	605	0	2
chr2	181037231	181037232	chunk0104_433_1	71.4223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	181037007	181037698	-61155831	+	Tigger3b	DNA	TcMar-Tigger	2	734	-497	2
chr2	181223923	181223924	chunk0104_435_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	181223844	181223988	-60969541	+	MER5A1	DNA	hAT-Charlie	1	164	-2	2
chr2	181232578	181232579	chunk0104_437_1	28.8861	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	181232422	181232634	-60960895	+	MIRc	SINE	MIR	3	229	-39	2
chr2	181272524	181272525	chunk0104_439_1	10.2513	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	181272335	181273521	-60920008	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	2
chr2	181485579	181485580	chunk0104_440_1	12.975	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	181485454	181485611	-60707918	+	L2b	LINE	L2	3243	3383	-4	2
chr2	181576192	181576193	chunk0105_2_1	22.11462	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	181576047	181576366	-60617163	+	L1MC4	LINE	L1	6999	7314	-728	2
chr2	181660209	181660210	chunk0105_4_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	181660023	181660345	-60533184	-	MER1B	DNA	hAT-Charlie	0	339	2	2
chr2	181698398	181698399	chunk0105_5_1	10.1791	AR_DHT_Control	chr2	181697888	181698465	-60495064	+	L2c	LINE	L2	2753	3280	-107	2
chr2	182008855	182008856	chunk0105_20_1	6.94032	AR_DHT_Control	chr2	182008530	182015122	-60178407	-	L1MA3	LINE	L1	0	7710	1051	2
chr2	182109275	182109276	chunk0105_28_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	182108787	182109788	-60083741	-	L1MC	LINE	L1	-608	5736	4707	2
chr2	182715143	182715144	chunk0105_34_1	26.7962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	182715139	182715335	-59478194	+	MIR	SINE	MIR	1	241	-21	2
chr2	182774292	182774293	chunk0105_35_1	15.3744	AR_DHT_Control	chr2	182772673	182774994	-59418535	-	L1PA6	LINE	L1	-3824	2495	178	2
chr2	182884825	182884826	chunk0105_38_1	25.23518	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	182883584	182884963	-59308566	-	L1MB7	LINE	L1	-8	6176	4846	2
chr2	182916637	182916638	chunk0105_44_1	100.65499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	182916423	182916728	-59276801	-	L2c	LINE	L2	-54	3333	2995	2
chr2	183014196	183014197	chunk0105_49_1	6.48643	AR_DHT_Control	chr2	183013203	183014230	-59179299	+	L2a	LINE	L2	2354	3426	0	2
chr2	183244491	183244492	chunk0105_55_1	266.3092	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	183244400	183244533	-58948996	+	L2b	LINE	L2	3243	3371	-4	2
chr2	183317204	183317205	chunk0105_56_1	41.65307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	183317119	183317465	-58876064	-	L2c	LINE	L2	-4	3383	3021	2
chr2	183426850	183426851	chunk0105_59_1	22.94162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	183426581	183426865	-58766664	+	HAL1ME	LINE	L1	2125	2415	-50	2
chr2	183547815	183547816	chunk0105_63_1	74.3951	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183547211	183551127	-58642402	+	L1PA7	LINE	L1	2534	6454	-15	2
chr2	183604371	183604372	chunk0105_64_1	39.8759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183603679	183604700	-58588829	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	1	2
chr2	183650485	183650486	chunk0105_68_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183650248	183650638	-58542891	-	MLT1J	LTR	ERVL-MaLR	-30	482	77	2
chr2	183735619	183735620	chunk0105_71_1	47.1234	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183735329	183735652	-58457877	-	L1MC5a	LINE	L1	-1700	1077	756	2
chr2	183872416	183872417	chunk0105_77_1	43.3431	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183872345	183872946	-58320583	+	MER67C	LTR	ERV1	1	705	-6	2
chr2	183904351	183904352	chunk0105_79_1	17.71898	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	183904025	183904391	-58289138	-	MER90	LTR	ERV1	-169	406	1	2
chr2	183909813	183909814	chunk0105_80_1	8.27376	AR_DHT_Control	chr2	183909102	183910221	-58283308	-	L1MD1	LINE	L1	-5232	1168	35	2
chr2	183926645	183926646	chunk0105_81_1	48.9224	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	183926567	183927245	-58266284	+	MER77	LTR	ERVL	1	604	0	2
chr2	183927528	183927529	chunk0105_82_1	6.50438	AR_DHT_Control	chr2	183927412	183927591	-58265938	+	MLT1H2	LTR	ERVL-MaLR	24	196	-293	2
chr2	183960536	183960537	chunk0105_83_1	5.6425	AR_DHT_Control	chr2	183960243	183960552	-58232977	-	L1M5	LINE	L1	-3102	3044	2677	2
chr2	183997248	183997249	chunk0105_85_1	23.2614	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	183997141	183997511	-58196018	+	MLT1I	LTR	ERVL-MaLR	37	410	-1	2
chr2	183998260	183998261	chunk0105_86_1	4.96282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	183998219	183998572	-58194957	+	L2a	LINE	L2	3034	3399	-27	2
chr2	184081331	184081332	chunk0105_89_1	47.9283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	184080744	184083755	-58109774	+	L1MEc	LINE	L1	60	3375	-2944	2
chr2	184335811	184335812	chunk0105_93_1	25.1998	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	184335267	184335825	-57857704	+	L2	LINE	L2	1468	2125	-1294	2
chr2	184367478	184367479	chunk0105_94_1	13.2699	AR_DHT_Control	chr2	184367162	184368239	-57825290	-	L1MD1	LINE	L1	-307	5935	4851	2
chr2	184392061	184392062	chunk0105_95_1	25.5471	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	184391981	184392346	-57801183	+	Charlie20a	DNA	hAT-Charlie	420	795	-12	2
chr2	184730784	184730785	chunk0105_108_1	15.21831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	184730222	184730960	-57462569	-	L1MC2	LINE	L1	-24	6495	5768	2
chr2	185098025	185098026	chunk0105_116_1	7.80475	AR_DHT_Control	chr2	185097984	185098288	-57095241	+	L1ME3G	LINE	L1	5619	5823	-301	2
chr2	185107087	185107088	chunk0105_118_1	32.6014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	185105231	185110538	-57082991	+	L1PA16	LINE	L1	855	6186	-317	2
chr2	185149118	185149119	chunk0105_119_1	8.27376	AR_DHT_Control	chr2	185149063	185149254	-57044275	-	MIR	SINE	MIR	-5	257	43	2
chr2	185318552	185318553	chunk0105_120_1	9.21264	AR_DHT_Control	chr2	185318194	185318600	-56874929	+	MER67C	LTR	ERV1	1	422	-289	2
chr2	185337068	185337069	chunk0105_121_1	7.42871	AR_DHT_Control	chr2	185336084	185339138	-56854391	-	L1MA3	LINE	L1	-4427	3138	9	2
chr2	185337520	185337521	chunk0105_122_1	13.4307	AR_DHT_Control	chr2	185336084	185339138	-56854391	-	L1MA3	LINE	L1	-4427	3138	9	2
chr2	185571116	185571117	chunk0105_126_1	7.36432	AR_DHT_Control	chr2	185570676	185571289	-56622240	-	LTR77	LTR	ERV1	0	622	1	2
chr2	185582869	185582870	chunk0105_127_1	53.62922	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	185582733	185585049	-56608480	+	L1M1	LINE	L1	12	3086	-4479	2
chr2	185620874	185620875	chunk0105_130_1	36.2367	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	185620734	185621129	-56572400	+	L2a	LINE	L2	2997	3426	0	2
chr2	186141122	186141123	chunk0105_140_1	35.18843	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	186141018	186141395	-56052134	+	LTR40a	LTR	ERVL	129	513	-6	2
chr2	186299891	186299892	chunk0105_141_1	42.3412	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	186299821	186300060	-55893469	-	L2c	LINE	L2	-80	3307	3076	2
chr2	186521605	186521606	chunk0105_149_1	6.48643	AR_DHT_Control	chr2	186521528	186522372	-55671157	+	LTR5_Hs	LTR	ERVK	1	878	-90	2
chr2	186624109	186624110	chunk0105_155_1	61.3203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	186623075	186624255	-55569274	+	L2b	LINE	L2	1803	3135	-252	2
chr2	186689145	186689146	chunk0105_156_1	10.3253	AR_DHT_Control	chr2	186688692	186689210	-55504319	+	Tigger17a	DNA	TcMar-Tigger	136	654	0	2
chr2	186690295	186690296	chunk0105_157_1	6.98722	AR_DHT_Control	chr2	186690276	186690468	-55503061	+	Tigger13a	DNA	TcMar-Tigger	37	234	-537	2
chr2	186877552	186877553	chunk0105_164_1	10.6287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	186876575	186879144	-55314385	-	L1MA8	LINE	L1	-187	7523	4987	2
chr2	187005823	187005824	chunk0105_167_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187005176	187007193	-55186336	+	L1ME3Cz	LINE	L1	3656	5330	-816	2
chr2	187218464	187218465	chunk0105_177_1	112.49207	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187218256	187218728	-54974801	-	MLT2B4	LTR	ERVL	-54	502	1	2
chr2	187541905	187541906	chunk0105_184_1	197.0943	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	187541728	187542109	-54651420	-	L2	LINE	L2	-1137	2282	1859	2
chr2	187552706	187552707	chunk0105_187_1	21.1577	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187552699	187552726	-54640803	+	(AAAAC)n	Simple_repeat	Simple_repeat	1	29	0	2
chr2	187569211	187569212	chunk0105_189_1	11.8254	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187569091	187569409	-54624120	+	MLT1I	LTR	ERVL-MaLR	71	393	-18	2
chr2	187570475	187570476	chunk0105_190_1	6.17368	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187570375	187570910	-54622619	+	L3	LINE	CR1	3475	3992	-107	2
chr2	187597084	187597085	chunk0105_193_1	76.5987	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	187596239	187597122	-54596407	+	L1MD3	LINE	L1	6979	7978	-17	2
chr2	187639660	187639661	chunk0105_195_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187639210	187639673	-54553856	-	L1MEg	LINE	L1	-3796	2350	1852	2
chr2	187689564	187689565	chunk0105_196_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187689539	187689576	-54503953	+	L2b	LINE	L2	3335	3371	-4	2
chr2	187743767	187743768	chunk0105_201_1	6.75904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187743476	187743911	-54449618	+	L1ME3A	LINE	L1	4002	4445	-1701	2
chr2	187847391	187847392	chunk0105_204_1	7.36432	AR_DHT_Control	chr2	187847288	187847502	-54346027	+	L2	LINE	L2	2798	3014	-405	2
chr2	187853540	187853541	chunk0105_207_1	29.32172	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	187852714	187853872	-54339657	-	L1MC1	LINE	L1	-20	6313	5100	2
chr2	187924539	187924540	chunk0105_209_1	73.99367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	187924380	187924805	-54268724	+	LTR38A1	LTR	ERV1	130	543	0	2
chr2	188072362	188072363	chunk0105_220_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	188072182	188072955	-54120574	+	LTR1F1	LTR	ERV1	1	729	0	2
chr2	188129835	188129836	chunk0105_221_1	84.3508	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	188129812	188129928	-54063601	+	L2c	LINE	L2	3254	3377	-10	2
chr2	188283664	188283665	chunk0105_226_1	14.6324	AR_DHT_Control	chr2	188282798	188283907	-53909622	+	L1PA16	LINE	L1	5040	6165	-1	2
chr2	188339639	188339640	chunk0105_233_1	36.87061	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	188339612	188339661	-53853868	+	MSTA	LTR	ERVL-MaLR	318	366	-62	2
chr2	188348467	188348468	chunk0105_234_1	24.0249	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	188348215	188348667	-53844862	+	Charlie14a	DNA	hAT-Charlie	106	576	-590	2
chr2	188364144	188364145	chunk0105_235_1	22.06693	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	188364073	188364241	-53829288	-	Helitron3Na_Mam	RC	Helitron	0	486	312	2
chr2	188516402	188516403	chunk0105_240_1	9.69453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	188516132	188516621	-53676908	-	HAL1	LINE	L1	-739	1768	1213	2
chr2	188552159	188552160	chunk0105_242_1	22.45438	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	188551106	188555778	-53637751	-	L1MA4A	LINE	L1	-23	7699	2906	2
chr2	188773265	188773266	chunk0105_250_1	56.13131	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	188773017	188773348	-53420181	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	2
chr2	189060324	189060325	chunk0105_256_1	81.02156	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189059962	189060367	-53133162	+	L2c	LINE	L2	2974	3387	0	2
chr2	189226239	189226240	chunk0105_263_1	8.9624	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189226231	189226270	-52967259	+	A-rich	Low_complexity	Low_complexity	1	42	0	2
chr2	189381169	189381170	chunk0105_264_1	28.11553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189380642	189381591	-52811938	+	L1M6	LINE	L1	1531	2655	-20	2
chr2	189424719	189424720	chunk0105_269_1	34.4716	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189423053	189425138	-52768391	+	L1MA6	LINE	L1	4269	6399	-1163	2
chr2	189641209	189641210	chunk0105_279_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189641019	189641985	-52551544	-	L2b	LINE	L2	-9	3366	2286	2
chr2	189866790	189866791	chunk0105_289_1	78.8877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	189866636	189866871	-52326658	-	MIR	SINE	MIR	0	262	9	2
chr2	189922588	189922589	chunk0105_292_1	61.24449	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	189922473	189922867	-52270662	+	Tigger17c	DNA	TcMar-Tigger	1	395	-793	2
chr2	189951932	189951933	chunk0105_294_1	10.788	AR_DHT_Control	chr2	189951754	189952316	-52241213	+	MER34A	LTR	ERV1	4	571	0	2
chr2	190069915	190069916	chunk0105_296_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	190069838	190069939	-52123590	-	MIR3	SINE	MIR	-8	200	98	2
chr2	190143397	190143398	chunk0105_298_1	7.36432	AR_DHT_Control	chr2	190143338	190143600	-52049929	+	L2c	LINE	L2	3046	3346	-41	2
chr2	190235635	190235636	chunk0105_303_1	103.92627	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	190235613	190235955	-51957574	+	L2c	LINE	L2	2946	3364	-62	2
chr2	190279593	190279594	chunk0105_307_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	190279533	190280123	-51913406	+	LTR10C	LTR	ERV1	1	591	0	2
chr2	190520675	190520676	chunk0105_318_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	190520479	190521974	-51671555	+	L2a	LINE	L2	631	2322	-1097	2
chr2	190655243	190655244	chunk0105_319_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	190655067	190655318	-51538211	-	Charlie23a	DNA	hAT-Charlie	-14	325	43	2
chr2	191093191	191093192	chunk0105_332_1	44.13827	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	191092576	191098769	-51094760	+	L1PA6	LINE	L1	177	6326	-1	2
chr2	191111971	191111972	chunk0105_333_1	8.27376	AR_DHT_Control	chr2	191111877	191112158	-51081371	+	L1ME1	LINE	L1	5901	6168	-11	2
chr2	191214196	191214197	chunk0105_336_1	14.2911	AR_DHT_Control	chr2	191214033	191214441	-50979088	-	L2c	LINE	L2	-38	3349	2965	2
chr2	191249688	191249689	chunk0105_338_1	79.21491	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	191249683	191249704	-50943825	+	(GTT)n	Simple_repeat	Simple_repeat	1	21	0	2
chr2	191358517	191358518	chunk0105_346_1	11.9693	AR_DHT_Control	chr2	191358375	191358603	-50834926	-	MamRTE1	LINE	RTE-BovB	-16	3796	3529	2
chr2	191415253	191415254	chunk0105_350_1	8.27423	AR_DHT_Control	chr2	191415080	191415304	-50778225	+	MIR	SINE	MIR	30	248	-14	2
chr2	191637715	191637716	chunk0105_351_1	5.44099	AR_DHT_Control	chr2	191637565	191637765	-50555764	+	Tigger15a	DNA	TcMar-Tigger	124	321	-394	2
chr2	191899010	191899011	chunk0105_363_1	11.9014	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	191898900	191899064	-50294465	-	L1M6	LINE	L1	-5191	1305	1142	2
chr2	191946699	191946700	chunk0105_366_1	5.6425	AR_DHT_Control	chr2	191946578	191946702	-50246827	+	L2a	LINE	L2	3294	3425	-1	2
chr2	192009151	192009152	chunk0105_368_1	16.57862	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192008914	192009231	-50184298	+	L4_C_Mam	LINE	RTE-X	4637	4933	-205	2
chr2	192027669	192027670	chunk0105_370_1	31.49614	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	192027654	192027961	-50165568	+	MER45B	DNA	hAT-Tip100	1	322	-718	2
chr2	192062418	192062419	chunk0105_373_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	192062066	192062559	-50130970	-	L1ME2	LINE	L1	-54	6110	5612	2
chr2	192207543	192207544	chunk0105_380_1	24.57502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192207443	192207571	-49985958	-	Charlie4z	DNA	hAT-Charlie	-36	131	5	2
chr2	192345390	192345391	chunk0105_382_1	8.27376	AR_DHT_Control	chr2	192343153	192345558	-49847971	-	L1MC1	LINE	L1	-3849	2472	8	2
chr2	192566385	192566386	chunk0105_399_1	22.9019	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192565885	192568492	-49625037	+	L1MC3	LINE	L1	5524	8133	-70	2
chr2	192577439	192577440	chunk0105_400_1	160.0886	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192577364	192577458	-49616071	+	Tigger14a	DNA	TcMar-Tigger	210	316	-8	2
chr2	192813988	192813989	chunk0105_409_1	31.45092	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	192813292	192814196	-49379333	-	L1MC2	LINE	L1	-1	6343	5446	2
chr2	192896526	192896527	chunk0105_414_1	89.22472	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	192895531	192896747	-49296782	+	L1MC2	LINE	L1	4341	5597	-747	2
chr2	192930563	192930564	chunk0105_416_1	37.6708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	192925167	192931291	-49262238	-	L1PA6	LINE	L1	-3	6151	9	2
chr2	193030458	193030459	chunk0105_420_1	91.5653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	193028201	193030863	-49162666	+	L1MA2	LINE	L1	5059	7707	-16	2
chr2	193250598	193250599	chunk0105_422_1	82.3328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	193250180	193250847	-48942682	+	L1MB1	LINE	L1	6248	6788	-2	2
chr2	193293839	193293840	chunk0105_427_1	20.09416	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	193292539	193294109	-48899420	+	L1ME2z	LINE	L1	4243	5961	-483	2
chr2	193586075	193586076	chunk0105_431_1	9.39801	AR_DHT_Control	chr2	193583240	193586313	-48607216	+	L1PA15-16	LINE	L1	1010	3658	-3907	2
chr2	193699799	193699800	chunk0105_434_1	5.41601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	193699049	193700004	-48493525	+	MER54A	LTR	ERVL	3	899	-2	2
chr2	194025919	194025920	chunk0105_438_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	194025918	194026067	-48167462	+	L1MEg	LINE	L1	2542	2684	-3635	2
chr2	194639542	194639543	chunk0105_441_1	29.7296	AR_DHT_Control	chr2	194639129	194644911	-47548618	+	L1PA6	LINE	L1	357	6153	-1	2
chr2	194895448	194895449	chunk0105_443_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	194891900	194895968	-47297561	-	L1MA3	LINE	L1	-1	7723	2206	2
chr2	195018647	195018648	chunk0105_445_1	44.1226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	195017799	195018832	-47174697	-	L2c	LINE	L2	-79	3308	2082	2
chr2	195099196	195099197	chunk0105_452_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	195097452	195099803	-47093726	+	L1PA16	LINE	L1	5122	7341	-244	2
chr2	195125456	195125457	chunk0105_453_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	195124664	195126492	-47067037	-	MER52A	LTR	ERV1	0	1755	1	2
chr2	195156805	195156806	chunk0105_456_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	195156223	195157320	-47036209	+	L1ME3A	LINE	L1	222	1361	-4881	2
chr2	195276899	195276900	chunk0105_459_1	11.5514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	195276619	195277784	-46915745	+	Tigger3b	DNA	TcMar-Tigger	2	1207	-24	2
chr2	195319781	195319782	chunk0106_2_1	36.9227	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	195318913	195320124	-46873405	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	2
chr2	195560396	195560397	chunk0106_15_1	5.6425	AR_DHT_Control	chr2	195560122	195560454	-46633075	-	L2c	LINE	L2	-49	3338	2975	2
chr2	195819062	195819063	chunk0106_23_1	29.2424	AR_DHT_Control	chr2	195818971	195819412	-46374117	+	L2c	LINE	L2	2929	3382	-5	2
chr2	195840779	195840780	chunk0106_24_1	18.15424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	195837833	195841210	-46352319	+	L1MEf	LINE	L1	227	4933	-1213	2
chr2	195966429	195966430	chunk0106_29_1	48.2925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	195964891	195967892	-46225637	-	L1MA3	LINE	L1	-1924	5641	2595	2
chr2	195968332	195968333	chunk0106_30_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	195967889	195969223	-46224306	-	L1MA3	LINE	L1	-5938	1627	17	2
chr2	196096493	196096494	chunk0106_34_1	18.21884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	196096345	196096677	-46096852	+	MER57B2	LTR	ERV1	10	403	0	2
chr2	196122342	196122343	chunk0106_36_1	13.26101	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	196122261	196122424	-46071105	+	MER58A	DNA	hAT-Charlie	45	223	-1	2
chr2	196189971	196189972	chunk0106_39_1	6.48643	AR_DHT_Control	chr2	196189447	196190386	-46003143	-	L1MC3	LINE	L1	-16	7769	6762	2
chr2	196206985	196206986	chunk0106_41_1	191.1579	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	196206918	196207034	-45986495	-	L2b	LINE	L2	-225	3162	3052	2
chr2	196231475	196231476	chunk0106_42_1	36.39392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	196231442	196231651	-45961878	+	MER58A	DNA	hAT-Charlie	2	224	0	2
chr2	196977765	196977766	chunk0106_70_1	37.7072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	196977245	196978058	-45215471	+	L1MB7	LINE	L1	4993	5840	-344	2
chr2	197169009	197169010	chunk0106_90_1	30.18381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	197168616	197169522	-45024007	+	L2b	LINE	L2	2484	3375	0	2
chr2	197170308	197170309	chunk0106_92_1	82.96884	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	197170230	197170461	-45023068	+	MER103C	DNA	hAT-Charlie	81	297	0	2
chr2	197229656	197229657	chunk0106_98_1	18.43044	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	197229604	197229837	-44963692	-	MIR	SINE	MIR	-10	252	6	2
chr2	197433703	197433704	chunk0106_103_1	31.20709	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	197433697	197433848	-44759681	+	L2b	LINE	L2	2913	3077	-298	2
chr2	197487579	197487580	chunk0106_105_1	75.21577	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	197487559	197487711	-44705818	-	L1MC4	LINE	L1	-1124	6918	6756	2
chr2	197588533	197588534	chunk0106_112_1	51.6345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	197588515	197588768	-44604761	-	L1ME4a	LINE	L1	-360	5819	5567	2
chr2	197613675	197613676	chunk0106_115_1	192.9691	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	197613661	197613824	-44579705	-	MamGypsy2-LTR	LTR	Gypsy	-16	167	3	2
chr2	197878999	197879000	chunk0106_120_1	48.1893	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	197878847	197879151	-44314378	+	MER102b	DNA	hAT-Charlie	3	332	-9	2
chr2	199816825	199816826	chunk0106_133_1	75.5882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	199816626	199816991	-42376538	+	L2a	LINE	L2	3040	3404	-22	2
chr2	199914799	199914800	chunk0106_135_1	8.27376	AR_DHT_Control	chr2	199914088	199914988	-42278541	+	L2a	LINE	L2	2191	3316	-110	2
chr2	200203690	200203691	chunk0106_143_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200203459	200204035	-41989494	+	MER51B	LTR	ERV1	1	634	0	2
chr2	200259771	200259772	chunk0106_146_1	25.64037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200259735	200259794	-41933735	+	SSU-rRNA_Hsa	rRNA	rRNA	1364	1422	-447	2
chr2	200425471	200425472	chunk0106_151_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200425438	200425649	-41767880	+	MIRb	SINE	MIR	26	246	-22	2
chr2	200458457	200458458	chunk0106_154_1	121.62101	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200457943	200458887	-41734642	+	L1MC5	LINE	L1	8221	9102	-202	2
chr2	200538550	200538551	chunk0106_155_1	12.1886	AR_DHT_Control	chr2	200537213	200538613	-41654916	+	L2a	LINE	L2	1717	3408	-18	2
chr2	200578819	200578820	chunk0106_157_1	20.64582	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	200578759	200578888	-41614641	-	L1M3	LINE	L1	-1382	4764	4639	2
chr2	200748421	200748422	chunk0106_165_1	18.26657	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	200748329	200748440	-41445089	-	MamTip3	DNA	hAT-Tip100	-188	312	201	2
chr2	200810448	200810449	chunk0106_174_1	7.67158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	200810349	200810468	-41383061	+	L2c	LINE	L2	2936	3069	-318	2
chr2	201057083	201057084	chunk0106_177_1	10.1791	AR_DHT_Control	chr2	201057035	201057225	-41136304	+	ERVL-E-int	LTR	ERVL	3180	3400	-2267	2
chr2	201232495	201232496	chunk0106_184_1	35.22299	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	201232238	201232551	-40960978	-	LTR41C	LTR	ERVL	-364	337	1	2
chr2	201422159	201422160	chunk0106_188_1	11.1716	AR_DHT_Control	chr2	201422069	201422332	-40771197	+	L1ME4b	LINE	L1	305	555	-337	2
chr2	202087111	202087112	chunk0106_199_1	18.37905	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	202087018	202087229	-40106300	+	MER58A	DNA	hAT-Charlie	3	212	-12	2
chr2	202091721	202091722	chunk0106_202_1	36.12732	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	202091645	202091730	-40101799	+	MER53	DNA	hAT	108	193	0	2
chr2	202418088	202418089	chunk0106_211_1	44.08758	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	202418024	202418189	-39775340	+	Tigger1	DNA	TcMar-Tigger	2249	2418	0	2
chr2	202449581	202449582	chunk0106_212_1	6.7912	AR_DHT_Control	chr2	202449361	202449815	-39743714	+	MER68	LTR	ERVL	32	470	-93	2
chr2	202568817	202568818	chunk0106_224_1	4.7573	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	202568788	202568917	-39624612	+	MamTip2	DNA	hAT-Tip100	18	151	-154	2
chr2	202588829	202588830	chunk0106_225_1	7.30485	AR_DHT_Control	chr2	202587921	202589640	-39603889	-	L1PA17	LINE	L1	-4607	2246	699	2
chr2	202589478	202589479	chunk0106_226_1	8.80199	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	202587921	202589640	-39603889	-	L1PA17	LINE	L1	-4607	2246	699	2
chr2	202634741	202634742	chunk0106_231_1	6.39136	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	202634737	202634771	-39558758	+	(AC)n	Simple_repeat	Simple_repeat	1	34	0	2
chr2	202749237	202749238	chunk0106_232_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	202749025	202749623	-39443906	+	L1ME4a	LINE	L1	5579	6074	-50	2
chr2	203081423	203081424	chunk0106_242_1	10.0445	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	203081298	203081490	-39112039	+	MIR	SINE	MIR	17	225	-37	2
chr2	203337219	203337220	chunk0106_247_1	36.2985	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	203336999	203337748	-38855781	+	L1MA9	LINE	L1	3993	4749	-1391	2
chr2	203464881	203464882	chunk0106_249_1	7.36432	AR_DHT_Control	chr2	203464689	203465605	-38727924	+	L1MC1	LINE	L1	5186	6115	-218	2
chr2	203544696	203544697	chunk0106_251_1	7.36432	AR_DHT_Control	chr2	203544539	203544854	-38648675	+	L2c	LINE	L2	3000	3353	-34	2
chr2	203570132	203570133	chunk0106_252_1	14.2975	AR_DHT_Control	chr2	203570076	203570188	-38623341	-	L2a	LINE	L2	-11	3415	3241	2
chr2	203637092	203637093	chunk0106_258_1	7.36432	AR_DHT_Control	chr2	203637065	203637249	-38556280	+	MIRb	SINE	MIR	38	266	-2	2
chr2	203775393	203775394	chunk0106_269_1	10.1791	AR_DHT_Control	chr2	203775222	203775453	-38418076	+	LTR33	LTR	ERVL	90	350	-165	2
chr2	203813138	203813139	chunk0106_270_1	4.6472	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	203812822	203813393	-38380136	-	L1MB4	LINE	L1	0	6180	5581	2
chr2	204012151	204012152	chunk0106_273_1	16.24734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	204012095	204012229	-38181300	+	MLT1K-int	LTR	ERVL-MaLR	470	593	-794	2
chr2	204418433	204418434	chunk0106_292_1	22.53978	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	204418064	204418592	-37774937	+	L1ME1	LINE	L1	5648	6178	-1	2
chr2	204424704	204424705	chunk0106_293_1	39.2389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	204423174	204427985	-37765544	+	L1PA15	LINE	L1	1875	6690	-2	2
chr2	204533895	204533896	chunk0106_297_1	49.866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	204533885	204534185	-37659344	-	AluJo	SINE	Alu	-12	300	2	2
chr2	204669646	204669647	chunk0106_301_1	9.24875	AR_DHT_Control	chr2	204669591	204669913	-37523616	+	HAL1ME	LINE	L1	1975	2321	-144	2
chr2	204672562	204672563	chunk0106_302_1	7.34658	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	204672426	204672639	-37520890	-	MER5C1	DNA	hAT-Charlie	-6	257	10	2
chr2	204737688	204737689	chunk0106_303_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	204737259	204738413	-37455116	-	L1PB3	LINE	L1	-670	5484	4309	2
chr2	204900657	204900658	chunk0106_305_1	19.45222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	204898453	204902095	-37291434	-	L1M1	LINE	L1	-3332	4233	606	2
chr2	205181516	205181517	chunk0106_313_1	85.78577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	205181442	205181652	-37011877	-	MER58A	DNA	hAT-Charlie	0	224	5	2
chr2	205187246	205187247	chunk0106_315_1	17.3925	AR_DHT_Control	chr2	205186955	205187350	-37006179	-	L2c	LINE	L2	-36	3351	2954	2
chr2	205200659	205200660	chunk0106_316_1	5.64367	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	205200576	205200825	-36992704	-	L2a	LINE	L2	0	3426	3160	2
chr2	205226639	205226640	chunk0106_318_1	38.0016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	205226339	205226901	-36966628	-	L1MA2	LINE	L1	-979	6586	6033	2
chr2	205498704	205498705	chunk0106_319_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	205498635	205499041	-36694488	+	L2c	LINE	L2	2975	3364	-23	2
chr2	205564826	205564827	chunk0106_321_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	205564434	205565720	-36627809	-	MamGypsy2-I	LTR	Gypsy	-42	4124	2792	2
chr2	205637774	205637775	chunk0106_323_1	15.8928	AR_DHT_Control	chr2	205637733	205637920	-36555609	+	MIRb	SINE	MIR	44	231	-37	2
chr2	205771797	205771798	chunk0106_327_1	117.639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	205771751	205771973	-36421556	-	MER58A	DNA	hAT-Charlie	-1	223	1	2
chr2	205972177	205972178	chunk0106_332_1	23.59744	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	205971890	205972201	-36221328	+	LTR49-int	LTR	ERV1	2948	3272	-3059	2
chr2	206120487	206120488	chunk0106_335_1	11.1716	AR_DHT_Control	chr2	206120261	206120821	-36072708	+	MSTB-int	LTR	ERVL-MaLR	5	570	-1081	2
chr2	206344085	206344086	chunk0106_338_1	33.3283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	206343722	206344184	-35849345	+	MER54A	LTR	ERVL	406	884	-17	2
chr2	206415365	206415366	chunk0106_340_1	43.34469	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	206411078	206416210	-35777319	-	L1P2	LINE	L1	-1003	5143	2	2
chr2	206745300	206745301	chunk0106_345_1	23.1748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	206744950	206745383	-35448146	+	MLT1C	LTR	ERVL-MaLR	33	464	-3	2
chr2	206749569	206749570	chunk0106_346_1	18.4549	AR_DHT_Control	chr2	206749560	206749899	-35443630	-	Tigger4b	DNA	TcMar-Tigger	0	361	1	2
chr2	206751405	206751406	chunk0106_347_1	6.98475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	206751393	206751451	-35442078	+	GA-rich	Low_complexity	Low_complexity	1	59	0	2
chr2	206774473	206774474	chunk0106_348_1	67.9825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	206774409	206774527	-35419002	-	L1ME3A	LINE	L1	0	6173	6042	2
chr2	206823460	206823461	chunk0106_353_1	447.0077	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	206823179	206823561	-35369968	-	L2c	LINE	L2	-181	3206	2813	2
chr2	206866125	206866126	chunk0106_355_1	45.0584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	206866008	206866179	-35327350	+	L2c	LINE	L2	3215	3383	-4	2
chr2	207060703	207060704	chunk0106_361_1	6.48643	AR_DHT_Control	chr2	207060443	207061001	-35132528	+	L2a	LINE	L2	2789	3422	-4	2
chr2	207173438	207173439	chunk0106_366_1	7.58612	AR_DHT_Control	chr2	207173245	207173443	-35020086	+	MamRep605	LTR?	LTR?	441	647	-202	2
chr2	207268412	207268413	chunk0106_376_1	204.1398	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	207268380	207268563	-34924966	+	L2a	LINE	L2	3246	3424	-2	2
chr2	207316763	207316764	chunk0106_380_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	207316714	207317142	-34876387	-	MER65A	LTR	ERV1	0	445	1	2
chr2	207584193	207584194	chunk0106_389_1	40.1193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	207583286	207584405	-34609124	-	L1MD3	LINE	L1	-1395	6775	5582	2
chr2	207617196	207617197	chunk0106_390_1	15.7989	AR_DHT_Control	chr2	207617174	207618091	-34575438	-	L2c	LINE	L2	-6	3381	2346	2
chr2	207744264	207744265	chunk0106_395_1	12.5882	AR_DHT_Control	chr2	207743979	207744352	-34449177	-	L2a	LINE	L2	-91	3335	2889	2
chr2	207787954	207787955	chunk0106_399_1	7.36432	AR_DHT_Control	chr2	207787554	207787960	-34405569	-	MER31B	LTR	ERV1	-22	444	3	2
chr2	207907906	207907907	chunk0106_409_1	10.1791	AR_DHT_Control	chr2	207907688	207908360	-34285169	-	L1MB7	LINE	L1	-29	6155	5476	2
chr2	207935290	207935291	chunk0106_410_1	6.01382	AR_DHT_Control	chr2	207935125	207935320	-34258209	-	MER103C	DNA	hAT-Charlie	-5	292	75	2
chr2	207955029	207955030	chunk0106_411_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	207954905	207955102	-34238427	+	MER134	DNA?	DNA?	3	193	-320	2
chr2	208043658	208043659	chunk0106_418_1	15.3744	AR_DHT_Control	chr2	208043594	208043877	-34149652	+	MER97c	DNA	hAT-Tip100	87	374	-755	2
chr2	208257440	208257441	chunk0106_426_1	46.5646	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	208256756	208257743	-33935786	-	LTR5B	LTR	ERVK	0	1002	2	2
chr2	208279655	208279656	chunk0106_427_1	49.7073	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	208278421	208279805	-33913724	-	L1PA16	LINE	L1	-9	6157	4748	2
chr2	208468791	208468792	chunk0106_432_1	31.6941	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	208468776	208468918	-33724611	+	L2a	LINE	L2	3279	3425	-1	2
chr2	208489842	208489843	chunk0106_435_1	10.4206	AR_DHT_Control	chr2	208489580	208490243	-33703286	+	L2a	LINE	L2	2693	3425	-1	2
chr2	208496159	208496160	chunk0106_437_1	25.8742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	208496120	208496227	-33697302	-	L2c	LINE	L2	0	3387	3292	2
chr2	208553026	208553027	chunk0106_439_1	88.0638	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	208551652	208553505	-33640024	-	L1M3d	LINE	L1	-4516	2049	683	2
chr2	208867523	208867524	chunk0106_441_1	36.1077	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	208867273	208868733	-33324796	+	L1MDb	LINE	L1	10	1408	-5225	2
chr2	209348805	209348806	chunk0106_449_1	19.35455	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	209348776	209348814	-32844715	+	(TTCCTCC)n	Simple_repeat	Simple_repeat	1	38	0	2
chr2	209391921	209391922	chunk0106_454_1	5.6425	AR_DHT_Control	chr2	209391807	209392010	-32801519	+	L3b	LINE	CR1	4946	5182	-50	2
chr2	209408850	209408851	chunk0106_456_1	5.6425	AR_DHT_Control	chr2	209407856	209409077	-32784452	+	L1MB7	LINE	L1	1129	2438	-5079	2
chr2	209416204	209416205	chunk0106_458_1	26.5751	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	209415217	209417328	-32776201	+	L1MC2	LINE	L1	2883	5932	-412	2
chr2	209417113	209417114	chunk0106_459_1	22.10543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	209415217	209417328	-32776201	+	L1MC2	LINE	L1	2883	5932	-412	2
chr2	210233790	210233791	chunk0107_23_1	354.6792	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	210233647	210234033	-31959496	+	LTR57	LTR	ERVL	1	370	-41	2
chr2	210390053	210390054	chunk0107_26_1	90.8514	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	210389899	210390073	-31803456	+	MIR	SINE	MIR	51	227	-35	2
chr2	210410529	210410530	chunk0107_28_1	10.7301	AR_DHT_Control	chr2	210409029	210411382	-31782147	-	Tigger1	DNA	TcMar-Tigger	0	2418	1	2
chr2	211020240	211020241	chunk0107_33_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	211019512	211021367	-31172162	-	L1PB1	LINE	L1	-361	6506	4607	2
chr2	211035856	211035857	chunk0107_35_1	38.75372	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	211035785	211035918	-31157611	-	L2b	LINE	L2	-301	3074	2929	2
chr2	211174801	211174802	chunk0107_39_1	50.68967	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	211174515	211174833	-31018696	-	L2b	LINE	L2	-58	3317	2981	2
chr2	211206531	211206532	chunk0107_44_1	58.8218	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	211206263	211206542	-30986987	-	L3b	LINE	CR1	-355	3744	3457	2
chr2	211556618	211556619	chunk0107_58_1	10.1791	AR_DHT_Control	chr2	211556567	211556725	-30636804	+	L1PA12	LINE	L1	3294	3452	-3314	2
chr2	212229048	212229049	chunk0107_69_1	8.46955	AR_DHT_Control	chr2	212229002	212229070	-29964459	+	L1MC4a	LINE	L1	6528	6596	-1286	2
chr2	212282789	212282790	chunk0107_72_1	21.712	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	212282629	212282793	-29910736	+	MER5A	DNA	hAT-Charlie	2	183	-6	2
chr2	212857300	212857301	chunk0107_79_1	97.7319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	212857114	212857361	-29336168	+	L2a	LINE	L2	3183	3425	-1	2
chr2	213031198	213031199	chunk0107_87_1	104.994	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	213031186	213031299	-29162230	-	L2b	LINE	L2	-5	3370	3259	2
chr2	213316613	213316614	chunk0107_96_1	176.8525	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	213315237	213317015	-28876514	+	L2a	LINE	L2	1483	3411	-15	2
chr2	213660770	213660771	chunk0107_99_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	213660439	213661073	-28532456	+	LTR14B	LTR	ERVK	3	608	0	2
chr2	214011598	214011599	chunk0107_105_1	4.83532	AR_DHT_Control	chr2	214011440	214011642	-28181887	-	MER58A	DNA	hAT-Charlie	-3	221	1	2
chr2	214155427	214155428	chunk0107_107_1	6.33484	AR_DHT_Control	chr2	214155334	214155509	-28038020	+	MER58A	DNA	hAT-Charlie	5	188	-36	2
chr2	214293786	214293787	chunk0107_108_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	214291604	214294513	-27899016	-	L1MA4A	LINE	L1	-3929	3636	730	2
chr2	214395224	214395225	chunk0107_118_1	186.3912	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	214394576	214395536	-27797993	-	L1MC1	LINE	L1	-11	6322	5315	2
chr2	214654485	214654486	chunk0107_126_1	58.8157	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	214654326	214654712	-27538817	+	L1MEg	LINE	L1	36	490	-5910	2
chr2	214749175	214749176	chunk0107_130_1	6.13982	AR_DHT_Control	chr2	214748859	214749316	-27444213	-	L2a	LINE	L2	-1	3425	2942	2
chr2	214753187	214753188	chunk0107_131_1	48.8635	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	214753133	214753248	-27440281	-	MIR3	SINE	MIR	-3	205	85	2
chr2	214811047	214811048	chunk0107_136_1	5.86499	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	214810986	214811398	-27382131	+	L2b	LINE	L2	2932	3374	-1	2
chr2	214919574	214919575	chunk0107_141_1	8.94451	AR_DHT_Control	chr2	214919134	214920089	-27273440	+	L1MB3	LINE	L1	4387	5384	-756	2
chr2	215125625	215125626	chunk0107_150_1	15.01573	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215123779	215129346	-27064183	-	L1PB2	LINE	L1	0	6867	105	2
chr2	215166783	215166784	chunk0107_151_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215166052	215167806	-27025723	+	L1PB1	LINE	L1	4397	6149	-2	2
chr2	215179291	215179292	chunk0107_152_1	34.3623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215178828	215179742	-27013787	-	L1MA4A	LINE	L1	-2967	4598	3909	2
chr2	215207147	215207148	chunk0107_156_1	191.9963	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215206885	215207700	-26985829	+	MER4-int	LTR	ERV1	1549	2353	-4245	2
chr2	215233153	215233154	chunk0107_158_1	68.7271	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215232531	215233339	-26960190	+	L1ME3D	LINE	L1	4169	5049	-1097	2
chr2	215269309	215269310	chunk0107_160_1	9.01503	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	215269274	215269327	-26924202	+	MIRc	SINE	MIR	207	262	-6	2
chr2	215529441	215529442	chunk0107_171_1	4.83532	AR_DHT_Control	chr2	215529248	215529444	-26664085	+	MLT1B	LTR	ERVL-MaLR	191	390	0	2
chr2	215544132	215544133	chunk0107_172_1	62.7774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	215544071	215544310	-26649219	+	MER58A	DNA	hAT-Charlie	1	223	-1	2
chr2	215794707	215794708	chunk0107_181_1	15.26754	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	215794355	215794774	-26398755	+	MER31B	LTR	ERV1	3	466	0	2
chr2	215919107	215919108	chunk0107_184_1	10.1791	AR_DHT_Control	chr2	215918959	215919177	-26274352	+	MER20	DNA	hAT-Charlie	2	219	0	2
chr2	216551813	216551814	chunk0107_204_1	34.2927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	216551704	216551818	-25641711	+	L2a	LINE	L2	3304	3423	-3	2
chr2	216560597	216560598	chunk0107_205_1	32.1704	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	216560520	216560654	-25632875	+	UCON47	Unknown	Unknown	28	159	-6	2
chr2	216621464	216621465	chunk0107_211_1	91.959	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	216621418	216621635	-25571894	+	MER58A	DNA	hAT-Charlie	1	223	-1	2
chr2	216751175	216751176	chunk0107_216_1	16.577	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	216746026	216752025	-25441504	+	L1PB1	LINE	L1	846	6866	-1	2
chr2	216862772	216862773	chunk0107_219_1	7.91804	AR_DHT_Control	chr2	216862691	216862783	-25330746	+	L2b	LINE	L2	3277	3375	-12	2
chr2	216954963	216954964	chunk0107_224_1	8.27376	AR_DHT_Control	chr2	216953515	216955635	-25237894	-	L1PREC2	LINE	L1	-2600	5541	3397	2
chr2	217047332	217047333	chunk0107_229_1	12.79154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	217047003	217047386	-25146143	+	L2a	LINE	L2	3025	3422	-4	2
chr2	217148045	217148046	chunk0107_238_1	16.19124	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	217147809	217148216	-25045313	-	MLT1H	LTR	ERVL-MaLR	0	549	123	2
chr2	217255825	217255826	chunk0107_245_1	9.19742	AR_DHT_Control	chr2	217255421	217255831	-24937698	-	L1MA8	LINE	L1	-342	5949	5536	2
chr2	217294235	217294236	chunk0107_249_1	50.4942	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	217294056	217294263	-24899266	-	L4_B_Mam	LINE	RTE-X	-2	4939	4704	2
chr2	217510885	217510886	chunk0107_265_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	217509331	217511072	-24682457	-	L1MC4	LINE	L1	-3827	2388	529	2
chr2	218052311	218052312	chunk0107_277_1	10.1791	AR_DHT_Control	chr2	218052106	218052615	-24140914	+	MER101-int	LTR	ERV1	2756	3273	-3366	2
chr2	218217217	218217218	chunk0107_278_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	218217197	218217234	-23976295	+	(GCG)n	Simple_repeat	Simple_repeat	1	38	0	2
chr2	218311044	218311045	chunk0107_280_1	18.3061	AR_DHT_Control	chr2	218310889	218311118	-23882411	+	Tigger3a	DNA	TcMar-Tigger	78	348	0	2
chr2	218312325	218312326	chunk0107_282_1	133.8945	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	218312230	218312342	-23881187	+	MIR	SINE	MIR	142	262	0	2
chr2	218313571	218313572	chunk0107_283_1	95.3097	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	218313570	218313893	-23879636	-	L1M5	LINE	L1	-363	5761	5417	2
chr2	218326459	218326460	chunk0107_286_1	20.152	AR_DHT_Control	chr2	218326384	218326624	-23866905	+	MIR	SINE	MIR	1	254	-8	2
chr2	218407353	218407354	chunk0107_289_1	34.3049	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	218407272	218407572	-23785957	-	L2c	LINE	L2	-10	3377	3059	2
chr2	218781285	218781286	chunk0107_296_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	218781265	218781431	-23412098	+	LTR37B	LTR	ERV1	298	466	-2	2
chr2	219126581	219126582	chunk0107_304_1	52.4211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	219126576	219127180	-23066349	-	L2c	LINE	L2	-13	3374	2786	2
chr2	219524527	219524528	chunk0107_311_1	17.82665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	219524345	219524564	-22668965	+	MIR	SINE	MIR	5	262	0	2
chr2	219781340	219781341	chunk0107_317_1	51.8207	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	219781143	219781348	-22412181	+	MIRc	SINE	MIR	21	236	-32	2
chr2	219836810	219836811	chunk0107_319_1	8.76676	AR_DHT_Control	chr2	219836428	219836891	-22356638	-	L1MB4	LINE	L1	-41	6139	5685	2
chr2	220325939	220325940	chunk0107_329_1	27.4631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	220325704	220325954	-21867575	+	MIR	SINE	MIR	8	262	0	2
chr2	220469297	220469298	chunk0107_331_1	21.00937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	220469290	220469495	-21724034	+	MER58A	DNA	hAT-Charlie	1	215	-9	2
chr2	220959750	220959751	chunk0107_332_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	220959530	220960141	-21233388	+	L1MEg1	LINE	L1	369	743	-5492	2
chr2	221742004	221742005	chunk0107_349_1	32.76512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	221741967	221742295	-20451234	-	L2c	LINE	L2	-1	3386	3080	2
chr2	222713341	222713342	chunk0107_360_1	4.83532	AR_DHT_Control	chr2	222713328	222713424	-19480105	+	MamSINE1	SINE	tRNA-RTE	161	255	-35	2
chr2	222734748	222734749	chunk0107_361_1	12.7341	AR_DHT_Control	chr2	222734585	222734775	-19458754	+	MIRb	SINE	MIR	76	268	0	2
chr2	222885307	222885308	chunk0107_370_1	61.1889	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	222885220	222885539	-19307990	-	L1ME3Cz	LINE	L1	-593	404	56	2
chr2	223230549	223230550	chunk0107_380_1	49.098	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	223230227	223230554	-18962975	+	L1M6	LINE	L1	7	392	-6104	2
chr2	223258867	223258868	chunk0107_381_1	21.46892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	223256751	223259553	-18933976	-	L1P2	LINE	L1	-3364	2955	176	2
chr2	223471480	223471481	chunk0107_386_1	11.5684	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	223471256	223471582	-18721947	-	MER66-int	LTR	ERV1	0	6676	6321	2
chr2	223863859	223863860	chunk0107_396_1	6.86304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	223863849	223863967	-18329562	-	UCON9	Unknown	Unknown	-26	297	173	2
chr2	223950932	223950933	chunk0107_399_1	76.09608	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	223950874	223951178	-18242351	-	L2a	LINE	L2	-1089	2330	2047	2
chr2	224565509	224565510	chunk0107_419_1	14.68211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	224565038	224567208	-17626321	-	Tigger2	DNA	TcMar-Tigger	0	2718	464	2
chr2	224772671	224772672	chunk0107_425_1	13.6548	AR_DHT_Control	chr2	224772531	224772733	-17420796	+	LTR33	LTR	ERVL	294	506	-9	2
chr2	224835601	224835602	chunk0107_431_1	41.8379	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	224835590	224835732	-17357797	-	MIR3	SINE	MIR	-9	199	20	2
chr2	225086369	225086370	chunk0107_442_1	9.80886	AR_DHT_Control	chr2	225086295	225086604	-17106925	-	HAL1ME	LINE	L1	-1461	1004	678	2
chr2	225260284	225260285	chunk0107_444_1	5.6425	AR_DHT_Control	chr2	225257312	225260885	-16932644	+	L1MA1	LINE	L1	22	3623	-3942	2
chr2	225449277	225449278	chunk0107_448_1	24.7681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	225449218	225449356	-16744173	+	MIRb	SINE	MIR	102	253	-15	2
chr2	225471658	225471659	chunk0107_449_1	7.36432	AR_DHT_Control	chr2	225471614	225471862	-16721667	-	MIRb	SINE	MIR	-8	260	2	2
chr2	225561367	225561368	chunk0107_450_1	12.1886	AR_DHT_Control	chr2	225560963	225561502	-16632027	-	L2a	LINE	L2	0	3426	2868	2
chr2	225670612	225670613	chunk0107_453_1	12.73	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	225670605	225670631	-16522898	+	(A)n	Simple_repeat	Simple_repeat	1	26	0	2
chr2	225761631	225761632	chunk0107_454_1	10.1791	AR_DHT_Control	chr2	225761495	225761645	-16431884	+	FAM	SINE	Alu	1	174	-11	2
chr2	225793259	225793260	chunk0107_457_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	225792945	225793475	-16400054	+	L1MEc	LINE	L1	1821	2722	-30	2
chr2	225841519	225841520	chunk0107_461_1	171.77045	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	225840873	225841712	-16351817	+	MER54A	LTR	ERVL	4	901	0	2
chr2	225862018	225862019	chunk0108_2_1	68.12742	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	225860839	225863631	-16329898	+	L1MC3	LINE	L1	4873	7622	-581	2
chr2	225975959	225975960	chunk0108_5_1	10.8666	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	225975896	225976040	-16217489	-	HAL1ME	LINE	L1	-342	2123	1979	2
chr2	226002590	226002591	chunk0108_9_1	4.24079	AR_DHT_Control	chr2	226002587	226002696	-16190833	+	MamRep605	LTR?	LTR?	423	533	-316	2
chr2	226169042	226169043	chunk0108_14_1	179.0099	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	226169036	226169164	-16024365	+	L2c	LINE	L2	3258	3380	-7	2
chr2	226549984	226549985	chunk0108_26_1	7.97539	AR_DHT_Control	chr2	226549979	226550022	-15643507	-	L2a	LINE	L2	-10	3416	3375	2
chr2	226910047	226910048	chunk0108_49_1	27.5109	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	226909906	226910065	-15283464	-	MER58A	DNA	hAT-Charlie	-12	212	58	2
chr2	227377791	227377792	chunk0108_67_1	23.50768	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	227377636	227378003	-14815526	+	L1PA13	LINE	L1	5807	6160	-3	2
chr2	227475746	227475747	chunk0108_71_1	8.68286	AR_DHT_Control	chr2	227475597	227475788	-14717741	+	MIRb	SINE	MIR	12	195	-73	2
chr2	227518231	227518232	chunk0108_74_1	11.3289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	227517867	227518516	-14675013	-	L1ME2	LINE	L1	-28	6136	5436	2
chr2	227626209	227626210	chunk0108_82_1	14.2911	AR_DHT_Control	chr2	227626019	227626364	-14567165	-	Tigger3c	DNA	TcMar-Tigger	0	602	252	2
chr2	227655389	227655390	chunk0108_83_1	19.39646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	227655376	227655419	-14538110	+	MLT1C-int	LTR	ERVL-MaLR	974	1016	-355	2
chr2	229516215	229516216	chunk0108_108_1	5.27772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	229515941	229516595	-12676934	-	LTR106_Mam	LTR	LTR	-38	670	1	2
chr2	229685776	229685777	chunk0108_113_1	59.1892	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	229685699	229686041	-12507488	-	L2b	LINE	L2	-1	3374	3006	2
chr2	229832249	229832250	chunk0108_121_1	7.23406	AR_DHT_Control	chr2	229832197	229832405	-12361124	+	MER58A	DNA	hAT-Charlie	4	222	-2	2
chr2	229848608	229848609	chunk0108_126_1	60.93817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	229847420	229848634	-12344895	+	HAL1	LINE	L1	3	1261	-1246	2
chr2	229849219	229849220	chunk0108_127_1	5.94305	AR_DHT_Control	chr2	229849134	229849436	-12344093	+	HAL1	LINE	L1	1953	2282	-225	2
chr2	230097974	230097975	chunk0108_130_1	204.479	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	230097519	230098492	-12095037	-	L1ME1	LINE	L1	-41	6138	5171	2
chr2	230222960	230222961	chunk0108_131_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	230222710	230222970	-11970559	-	L1ME2	LINE	L1	-108	6056	5813	2
chr2	230335563	230335564	chunk0108_132_1	6.48643	AR_DHT_Control	chr2	230335513	230335659	-11857870	-	L1ME3G	LINE	L1	-3313	2833	2683	2
chr2	230347155	230347156	chunk0108_133_1	16.8372	AR_DHT_Control	chr2	230344695	230347350	-11846179	-	L1M2	LINE	L1	-3182	3660	1338	2
chr2	230351012	230351013	chunk0108_134_1	11.9649	AR_DHT_Control	chr2	230350521	230351074	-11842455	-	L2a	LINE	L2	-10	3416	2840	2
chr2	230630827	230630828	chunk0108_136_1	35.6976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	230630436	230631114	-11562415	+	L1MC1	LINE	L1	5308	5965	-368	2
chr2	230640971	230640972	chunk0108_138_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	230640711	230641026	-11552503	+	Tigger3c	DNA	TcMar-Tigger	1	312	-290	2
chr2	230756265	230756266	chunk0108_141_1	34.1279	AR_DHT_Control	chr2	230756143	230756450	-11437079	-	Tigger3a	DNA	TcMar-Tigger	-3	345	1	2
chr2	230777864	230777865	chunk0108_142_1	8.21385	AR_DHT_Control	chr2	230777708	230778000	-11415529	-	L1ME4a	LINE	L1	-289	5835	5530	2
chr2	230800700	230800701	chunk0108_143_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	230800408	230800795	-11392734	+	L3	LINE	CR1	1259	1662	-2437	2
chr2	230850572	230850573	chunk0108_145_1	11.1716	AR_DHT_Control	chr2	230850529	230850810	-11342719	+	L1ME4a	LINE	L1	5536	5824	-300	2
chr2	230879949	230879950	chunk0108_146_1	26.5872	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	230879835	230880048	-11313481	+	L1M5	LINE	L1	4488	4703	-1443	2
chr2	231029730	231029731	chunk0108_148_1	55.72129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	231029485	231029741	-11163788	+	ERVL-E-int	LTR	ERVL	2002	2262	-3405	2
chr2	231058704	231058705	chunk0108_155_1	6.18182	AR_DHT_Control	chr2	231058633	231058967	-11134562	+	L2a	LINE	L2	2875	3254	-121	2
chr2	231159592	231159593	chunk0108_160_1	7.36432	AR_DHT_Control	chr2	231159498	231159625	-11033904	+	MER102b	DNA	hAT-Charlie	218	340	-1	2
chr2	231305409	231305410	chunk0108_164_1	22.94704	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	231304696	231305708	-10887821	-	Charlie1	DNA	hAT-Charlie	-674	2107	1015	2
chr2	232069756	232069757	chunk0108_175_1	9.21264	AR_DHT_Control	chr2	232069536	232069813	-10123716	+	MLT1K	LTR	ERVL-MaLR	172	419	-176	2
chr2	232183371	232183372	chunk0108_179_1	143.03523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	232183284	232184242	-10009287	-	L1MB7	LINE	L1	-6588	929	1	2
chr2	232189031	232189032	chunk0108_181_1	17.693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	232188388	232189911	-10003618	+	L1MD2	LINE	L1	4802	6356	-3	2
chr2	232283098	232283099	chunk0108_190_1	20.58628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	232283092	232283257	-9910272	-	MIRb	SINE	MIR	0	268	65	2
chr2	232301115	232301116	chunk0108_194_1	11.884	AR_DHT_Control	chr2	232301051	232301251	-9892278	-	MIRb	SINE	MIR	0	268	64	2
chr2	233097725	233097726	chunk0108_208_1	42.9655	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	233097067	233097780	-9095749	-	L1M5	LINE	L1	-1204	4942	4185	2
chr2	233144431	233144432	chunk0108_209_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	233143841	233144825	-9048704	+	(GTGATG)n	Simple_repeat	Simple_repeat	5	1013	0	2
chr2	233156798	233156799	chunk0108_210_1	6.83133	AR_DHT_Control	chr2	233156640	233156977	-9036552	-	MER68	LTR	ERVL	-186	377	1	2
chr2	233370598	233370599	chunk0108_213_1	5.44099	AR_DHT_Control	chr2	233370516	233370740	-8822789	-	L1MB4	LINE	L1	-303	5877	5671	2
chr2	233381843	233381844	chunk0108_215_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	233381736	233381949	-8811580	+	MIRc	SINE	MIR	26	249	-19	2
chr2	233391334	233391335	chunk0108_216_1	48.6578	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	233391280	233391521	-8802008	-	L1ME4a	LINE	L1	-94	6030	5775	2
chr2	233415018	233415019	chunk0108_218_1	5.24411	AR_DHT_Control	chr2	233414967	233415076	-8778453	-	FLAM_C	SINE	Alu	-91	211	22	2
chr2	233495267	233495268	chunk0108_220_1	5.9324	AR_DHT_Control	chr2	233495026	233495300	-8698229	+	L1ME4b	LINE	L1	437	720	-172	2
chr2	233495911	233495912	chunk0108_222_1	20.34212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	233495824	233496081	-8697448	+	L1ME4b	LINE	L1	5787	5902	-1980	2
chr2	233572698	233572699	chunk0108_226_1	230.089	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	233572687	233572793	-8620736	+	L1M5	LINE	L1	5496	5597	-582	2
chr2	233597738	233597739	chunk0108_230_1	46.7565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	233597598	233597761	-8595768	-	L1M5	LINE	L1	-514	5665	5492	2
chr2	233608115	233608116	chunk0108_231_1	6.48643	AR_DHT_Control	chr2	233608092	233608500	-8585029	-	MSTB1	LTR	ERVL-MaLR	0	432	1	2
chr2	233649527	233649528	chunk0108_232_1	58.832	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	233649460	233649671	-8543858	-	L1ME4a	LINE	L1	-128	5996	5780	2
chr2	233710504	233710505	chunk0108_234_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	233709738	233710899	-8482630	-	L1ME1	LINE	L1	-5	6174	5006	2
chr2	233736795	233736796	chunk0108_237_1	27.24264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	233734111	233737684	-8455845	-	L1PA6	LINE	L1	-2603	3543	12	2
chr2	233853277	233853278	chunk0108_243_1	6.18774	AR_DHT_Control	chr2	233853033	233853308	-8340221	+	LTR82A	LTR	ERVL	521	830	-42	2
chr2	233868480	233868481	chunk0108_244_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	233868461	233868747	-8324782	-	L1M5	LINE	L1	-2848	3298	2989	2
chr2	234065152	234065153	chunk0108_258_1	11.45742	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	234064548	234065282	-8128247	-	L1MB7	LINE	L1	-2	6182	5443	2
chr2	234224136	234224137	chunk0108_264_1	62.2237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	234223679	234224694	-7968835	-	L1ME2	LINE	L1	-3	6161	5125	2
chr2	234244139	234244140	chunk0108_266_1	31.44479	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	234243863	234244299	-7949230	-	MER51B	LTR	ERV1	-2	375	1	2
chr2	234406364	234406365	chunk0108_271_1	14.2024	AR_DHT_Control	chr2	234406191	234406366	-7787163	+	L1ME3B	LINE	L1	5628	5802	-440	2
chr2	234837562	234837563	chunk0108_285_1	95.13768	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	234837450	234837612	-7355917	-	MIR	SINE	MIR	-77	185	17	2
chr2	234845929	234845930	chunk0108_286_1	41.4707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	234845591	234845948	-7347581	-	MER47A	DNA	TcMar-Tigger	0	366	1	2
chr2	234867921	234867922	chunk0108_288_1	57.10297	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	234867659	234868360	-7325169	-	Tigger17c	DNA	TcMar-Tigger	-479	709	1	2
chr2	234928481	234928482	chunk0108_291_1	9.38051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	234928437	234928542	-7264987	-	MLT1N2	LTR	ERVL-MaLR	-3	559	444	2
chr2	235086775	235086776	chunk0108_303_1	55.1841	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	235086576	235086813	-7106716	-	L2	LINE	L2	-1488	1931	1670	2
chr2	235182501	235182502	chunk0108_307_1	80.8343	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	235181974	235182798	-7010731	-	L1MC2	LINE	L1	-8	6336	5501	2
chr2	235291627	235291628	chunk0108_309_1	5.6425	AR_DHT_Control	chr2	235290854	235292489	-6901040	+	L1MC4a	LINE	L1	5373	7174	-708	2
chr2	235335449	235335450	chunk0108_311_1	24.7023	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	235335373	235335489	-6858040	-	MER58A	DNA	hAT-Charlie	-105	119	3	2
chr2	235344450	235344451	chunk0108_312_1	9.56062	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	235344043	235344865	-6848664	+	(CACACA)n	Simple_repeat	Simple_repeat	1	828	0	2
chr2	235491698	235491699	chunk0108_316_1	67.30988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	235491629	235492108	-6701421	+	LTR40a	LTR	ERVL	61	519	0	2
chr2	235541190	235541191	chunk0108_319_1	84.6992	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	235541180	235541351	-6652178	-	L1ME3D	LINE	L1	-29	6213	6035	2
chr2	235831860	235831861	chunk0108_341_1	13.0632	AR_DHT_Control	chr2	235831195	235832269	-6361260	-	L1MC1	LINE	L1	-5	6339	5193	2
chr2	235924860	235924861	chunk0108_342_1	105.45248	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	235924536	235924990	-6268539	-	LTR40a	LTR	ERVL	-25	494	1	2
chr2	236002207	236002208	chunk0108_344_1	21.5224	AR_DHT_Control	chr2	236002172	236002295	-6191234	-	L2b	LINE	L2	-2	3373	3252	2
chr2	236444386	236444387	chunk0108_358_1	25.43244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	236444294	236444521	-5749008	-	Charlie1a	DNA	hAT-Charlie	-1183	272	5	2
chr2	236569897	236569898	chunk0108_361_1	5.37183	AR_DHT_Control	chr2	236569855	236569919	-5623610	+	(AGCC)n	Simple_repeat	Simple_repeat	1	66	0	2
chr2	236586077	236586078	chunk0108_364_1	7.09019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	236586001	236586184	-5607345	+	MIRb	SINE	MIR	81	259	-9	2
chr2	236680072	236680073	chunk0108_369_1	247.5935	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	236679996	236680144	-5513385	+	L1M5	LINE	L1	5672	5821	-303	2
chr2	236947582	236947583	chunk0108_379_1	5.6425	AR_DHT_Control	chr2	236947581	236947654	-5245875	+	L2c	LINE	L2	3260	3333	-54	2
chr2	237048335	237048336	chunk0108_388_1	45.901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	237048277	237048372	-5145157	+	L1M5	LINE	L1	4741	4836	-1310	2
chr2	237099713	237099714	chunk0108_393_1	7.78938	AR_DHT_Control	chr2	237099566	237099929	-5093600	+	L1MC5a	LINE	L1	1261	1632	-1145	2
chr2	237235717	237235718	chunk0108_394_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	237234940	237236031	-4957498	-	ERVL-E-int	LTR	ERVL	-1946	3721	2560	2
chr2	237242228	237242229	chunk0108_396_1	15.7065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	237241634	237243000	-4950529	+	ERVL-E-int	LTR	ERVL	207	1692	-3975	2
chr2	237468367	237468368	chunk0108_403_1	57.4043	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	237467520	237468563	-4724966	-	L1MD2	LINE	L1	-10	6349	5303	2
chr2	237509992	237509993	chunk0108_411_1	5.30168	AR_DHT_Control	chr2	237509843	237510275	-4683254	+	L4_B_Mam	LINE	RTE-X	3628	4103	-838	2
chr2	237590356	237590357	chunk0108_416_1	9.01503	AR_DHT_Control	chr2	237590304	237590436	-4603093	+	(AC)n	Simple_repeat	Simple_repeat	1	133	0	2
chr2	237939437	237939438	chunk0108_434_1	5.6425	AR_DHT_Control	chr2	237939204	237939648	-4253881	+	L1MC3	LINE	L1	6213	6645	-1140	2
chr2	237996071	237996072	chunk0108_435_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	237995974	237996272	-4197257	-	Tigger15a	DNA	TcMar-Tigger	-22	693	386	2
chr2	238079958	238079959	chunk0108_441_1	41.7434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	238079367	238080219	-4113310	-	L1MB7	LINE	L1	-504	2935	1992	2
chr2	238141994	238141995	chunk0108_442_1	7.37742	AR_DHT_Control	chr2	238141717	238142025	-4051504	-	L2b	LINE	L2	-36	3339	3013	2
chr2	238392245	238392246	chunk0108_457_1	24.8955	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	238392211	238392574	-3800955	-	L1MD1	LINE	L1	-63	6179	5829	2
chr2	238404807	238404808	chunk0108_458_1	10.1791	AR_DHT_Control	chr2	238404613	238404900	-3788629	-	L1MCc	LINE	L1	-5422	1001	796	2
chr2	238418440	238418441	chunk0108_459_1	18.8046	AR_DHT_Control	chr2	238418360	238418459	-3775070	+	L2a	LINE	L2	3287	3386	-40	2
chr2	238436145	238436146	chunk0108_460_1	16.34725	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	238436050	238436299	-3757230	-	L1MEd	LINE	L1	-2849	3297	3038	2
chr2	238802037	238802038	chunk0109_345_1	4.75321	AR_DHT_Control	chr2	238801833	238802095	-3391434	+	Tigger3b	DNA	TcMar-Tigger	965	1231	0	2
chr2	238900808	238900809	chunk0109_354_1	183.6766	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr2	238900754	238900889	-3292640	-	L1MEj	LINE	L1	-1020	1140	1002	2
chr2	239208712	239208713	chunk0109_360_1	5.40815	AR_DHT_Control	chr2	239208356	239208885	-2984644	+	L1ME3Cz	LINE	L1	3828	4481	-1665	2
chr2	239317223	239317224	chunk0109_367_1	94.8826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	239316630	239317719	-2875810	+	L1MC4	LINE	L1	5801	7132	-910	2
chr2	239494690	239494691	chunk0109_378_1	4.73937	AR_DHT_Control	chr2	239494550	239494973	-2698556	-	L1MC2	LINE	L1	-11	6333	5908	2
chr2	239723798	239723799	chunk0109_379_1	5.12066	AR_DHT_Control	chr2	239723769	239723934	-2469595	+	(TG)n	Simple_repeat	Simple_repeat	1	164	0	2
chr2	239942589	239942590	chunk0109_383_1	9.56062	AR_DHT_Control	chr2	239942416	239943115	-2250414	-	HAL1b	LINE	L1	-1348	1073	339	2
chr2	240039701	240039702	chunk0109_386_1	24.46556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	240034679	240040387	-2153142	-	L1MA4	LINE	L1	-744	6975	1243	2
chr2	240098536	240098537	chunk0109_388_1	14.2911	AR_DHT_Control	chr2	240098091	240098666	-2094863	+	L1PB3	LINE	L1	2951	3515	-3400	2
chr2	240237304	240237305	chunk0109_394_1	5.59431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	240237258	240237620	-1955909	-	L1MC5a	LINE	L1	-1698	1079	724	2
chr2	240280811	240280812	chunk0109_398_1	16.01133	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	240276828	240284289	-1909240	+	L1MA3	LINE	L1	14	7719	-5	2
chr2	240309204	240309205	chunk0109_399_1	5.20246	SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	240308668	240309861	-1883668	+	(TG)n	Simple_repeat	Simple_repeat	1	1193	0	2
chr2	240330861	240330862	chunk0109_400_1	28.33556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	240330857	240330957	-1862572	+	HAL1	LINE	L1	1596	1684	-823	2
chr2	240379311	240379312	chunk0109_402_1	57.38408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	240379055	240379486	-1814043	+	L2	LINE	L2	2539	3064	-355	2
chr2	240409778	240409779	chunk0109_403_1	38.8448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	240409464	240409872	-1783657	+	L1M7	LINE	L1	3976	4382	-1832	2
chr2	240638927	240638928	chunk0109_408_1	21.2878	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	240638823	240639230	-1554299	-	HAL1ME	LINE	L1	-919	1546	1096	2
chr2	241006564	241006565	chunk0109_414_1	4.83274	AR_DHT_Control	chr2	241006342	241007091	-1186438	+	L1MC4	LINE	L1	6293	7098	-944	2
chr2	241174072	241174073	chunk0109_421_1	25.2327	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	241173408	241174668	-1018861	-	L1MEc	LINE	L1	-934	1818	117	2
chr2	241321270	241321271	chunk0109_428_1	5.28628	SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	241321148	241321894	-871635	-	L1MEj	LINE	L1	-3498	2648	1786	2
chr2	241329908	241329909	chunk0109_430_1	40.9717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr2	241329519	241330095	-863434	-	LTR10C	LTR	ERV1	0	591	11	2
chr2	241619447	241619448	chunk0109_450_1	7.44578	AR_DHT_Control	chr2	241619331	241619682	-573847	-	Tigger3c	DNA	TcMar-Tigger	0	602	227	2
chr2	241640871	241640872	chunk0109_451_1	8.11543	AR_DHT_Control	chr2	241640468	241641268	-552261	-	L2a	LINE	L2	-2	3424	2515	2
chr2	241657763	241657764	chunk0109_453_1	16.0762	AR_DHT_Control	chr2	241657665	241657869	-535660	+	L2a	LINE	L2	2632	2872	-547	2
chr2	241833430	241833431	chunk0109_454_1	17.48052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr2	241833198	241833670	-359859	+	L1MC1	LINE	L1	5390	5886	-447	2
chr2	241882637	241882638	chunk0109_455_1	16.33952	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr2	241882583	241882709	-310820	-	L1MEf	LINE	L1	-693	5458	5334	2
chr2	241979050	241979051	chunk0109_457_1	8.24382	AR_DHT_Control	chr2	241978950	241979270	-214259	-	L1MC3	LINE	L1	-2036	5749	5421	2
chr2	242134693	242134694	chunk0109_464_1	10.1791	AR_DHT_Control	chr2	242134556	242135213	-58316	-	L2a	LINE	L2	-4	3422	2721	2
chr20	61737	61738	chunk0109_2_1	15.04828	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	60220	63215	-64380952	+	(ATTCC)n	Simple_repeat	Simple_repeat	2	3000	0	2
chr20	143457	143458	chunk0109_5_1	14.73783	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	143357	143704	-64300463	-	L1ME4a	LINE	L1	-187	5937	5580	2
chr20	250891	250892	chunk0109_9_1	24.24	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	250826	251054	-64193113	-	L1ME1	LINE	L1	-471	5708	5449	2
chr20	289715	289716	chunk0109_12_1	7.08133	AR_DHT_Control	chr20	289708	289902	-64154265	+	MIR	SINE	MIR	49	262	0	2
chr20	345645	345646	chunk0109_13_1	11.9876	AR_DHT_Control	chr20	345632	345665	-64098502	+	(CA)n	Simple_repeat	Simple_repeat	1	33	0	2
chr20	366603	366604	chunk0109_16_1	11.7904	AR_DHT_Control	chr20	366412	366922	-64077245	+	L1ME4b	LINE	L1	377	926	-1851	2
chr20	370861	370862	chunk0109_18_1	12.69114	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	370700	370903	-64073264	-	L2a	LINE	L2	-1	3425	3213	2
chr20	395712	395713	chunk0109_19_1	8.96579	AR_DHT_Control	chr20	395677	395787	-64048380	+	MIRb	SINE	MIR	133	252	-16	2
chr20	446109	446110	chunk0109_22_1	4.67225	AR_DHT_Control	chr20	446024	446114	-63998053	+	L2c	LINE	L2	3286	3387	0	2
chr20	461060	461061	chunk0109_23_1	5.23393	AR_DHT_Control	chr20	461019	461082	-63983085	+	A-rich	Low_complexity	Low_complexity	1	63	0	2
chr20	461633	461634	chunk0109_25_1	21.52647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	461380	461661	-63982506	-	AluJr4	SINE	Alu	-28	284	1	2
chr20	510707	510708	chunk0109_32_1	14.359	AR_DHT_Control	chr20	510700	511020	-63933147	-	AluJb	SINE	Alu	0	312	2	2
chr20	571310	571311	chunk0109_35_1	5.73594	AR_DHT_Control	chr20	571187	571589	-63872578	-	Charlie4a	DNA	hAT-Charlie	-74	434	1	2
chr20	740401	740402	chunk0109_43_1	20.41903	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	740290	740621	-63703546	-	LTR8	LTR	ERV1	-272	419	1	2
chr20	812602	812603	chunk0109_45_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	811835	812820	-63631347	-	LTR5B	LTR	ERVK	0	1002	1	2
chr20	857458	857459	chunk0109_48_1	7.4311	AR_DHT_Control	chr20	857034	857580	-63586587	-	L1ME1	LINE	L1	-15	6164	5586	2
chr20	1024177	1024178	chunk0109_53_1	7.09019	AR_DHT_Control	chr20	1024095	1024283	-63419884	+	L2a	LINE	L2	3234	3426	0	2
chr20	1345956	1345957	chunk0109_61_1	117.82389	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	1345419	1347824	-63096343	-	L1MC2	LINE	L1	-146	6198	3742	2
chr20	1366667	1366668	chunk0109_62_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	1366666	1366914	-63077253	+	L1ME4c	LINE	L1	514	763	-67	2
chr20	1381611	1381612	chunk0109_64_1	27.67511	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	1380896	1381938	-63062229	+	L1ME1	LINE	L1	4916	6018	-161	2
chr20	1401514	1401515	chunk0109_66_1	6.44773	AR_DHT_Control	chr20	1401325	1402259	-63041908	+	HERVK3-int	LTR	ERVK	6280	7200	-2	2
chr20	1427991	1427992	chunk0109_68_1	25.47082	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	1427226	1428375	-63015792	+	L1MD2	LINE	L1	28	1255	-5385	2
chr20	1487361	1487362	chunk0109_69_1	69.4711	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	1486372	1487651	-62956516	+	L1ME1	LINE	L1	3726	5038	-1281	2
chr20	1697316	1697317	chunk0109_71_1	7.03383	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	1697152	1697318	-62746849	+	MIRb	SINE	MIR	2	163	-45	2
chr20	1799175	1799176	chunk0109_74_1	203.6306	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	1798751	1799385	-62644782	+	L1MC3	LINE	L1	5676	6319	-1884	2
chr20	1943872	1943873	chunk0109_79_1	15.9612	AR_DHT_Control	chr20	1943737	1943893	-62500274	-	L2b	LINE	L2	-2	3385	3226	2
chr20	2026537	2026538	chunk0109_83_1	4.67092	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	2025983	2027528	-62416639	-	MER52A	LTR	ERV1	0	1755	1	2
chr20	2088768	2088769	chunk0109_89_1	17.66185	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	2088648	2088785	-62355382	+	L1ME4b	LINE	L1	713	852	-40	2
chr20	2171628	2171629	chunk0109_94_1	164.7942	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	2171401	2171686	-62272481	+	L2b	LINE	L2	2541	2886	-533	2
chr20	2244879	2244880	chunk0109_95_1	44.2464	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	2244606	2246848	-62197319	-	MER68-int	LTR	ERVL	-24	2966	601	2
chr20	2256410	2256411	chunk0109_97_1	15.9053	AR_DHT_Control	chr20	2256318	2256443	-62187724	+	LFSINE_Vert	SINE	tRNA	302	420	-39	2
chr20	2265086	2265087	chunk0109_98_1	128.1091	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	2264447	2270606	-62173561	+	L1PA6	LINE	L1	5	6149	-5	2
chr20	2338676	2338677	chunk0109_104_1	6.56183	AR_DHT_Control	chr20	2338574	2338680	-62105487	+	MIRb	SINE	MIR	24	150	-118	2
chr20	2368131	2368132	chunk0109_105_1	9.87004	AR_DHT_Control	chr20	2367927	2369673	-62074494	-	HAL1	LINE	L1	-128	2379	801	2
chr20	2452784	2452785	chunk0109_107_1	146.59011	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	2452441	2452867	-61991300	+	L2a	LINE	L2	2990	3426	0	2
chr20	2510011	2510012	chunk0109_110_1	13.6789	AR_DHT_Control	chr20	2509794	2510460	-61933707	+	MER67C	LTR	ERV1	3	711	0	2
chr20	2544445	2544446	chunk0109_111_1	62.252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	2544215	2544747	-61899420	-	MER110-int	LTR	ERV1	-68	4579	4052	2
chr20	2846528	2846529	chunk0109_123_1	22.30938	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	2846416	2846553	-61597614	-	L1MB2	LINE	L1	-500	5671	5522	2
chr20	2879906	2879907	chunk0109_126_1	17.6772	AR_DHT_Control	chr20	2879622	2879962	-61564205	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	2
chr20	2890886	2890887	chunk0109_127_1	7.37742	AR_DHT_Control	chr20	2890693	2891447	-61552720	+	L2a	LINE	L2	2088	3010	-409	2
chr20	2996528	2996529	chunk0109_129_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	2996426	2997134	-61447033	+	L1ME3G	LINE	L1	81	347	-577	2
chr20	3023255	3023256	chunk0109_130_1	37.03491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	3022939	3023895	-61420272	+	LTR5B	LTR	ERVK	1	1002	0	2
chr20	3058391	3058392	chunk0109_131_1	5.6425	AR_DHT_Control	chr20	3058217	3058547	-61385620	+	ERV3-16A3_I-int	LTR	ERVL	2734	3073	-2153	2
chr20	3313857	3313858	chunk0109_136_1	83.7866	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	3313603	3314310	-61129857	+	MLT1E2-int	LTR	ERVL-MaLR	809	1484	-5	2
chr20	3341520	3341521	chunk0109_137_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	3341480	3341788	-61102379	+	L2c	LINE	L2	2467	2821	-598	2
chr20	3393507	3393508	chunk0109_141_1	25.1266	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	3393293	3393541	-61050626	+	AluJb	SINE	Alu	64	312	0	2
chr20	3443727	3443728	chunk0109_142_1	6.48643	AR_DHT_Control	chr20	3443716	3444076	-61000091	+	L1MEg	LINE	L1	651	992	-5250	2
chr20	3553850	3553851	chunk0109_145_1	9.88994	AR_DHT_Control	chr20	3553401	3554040	-60890127	+	L2c	LINE	L2	2688	3384	-3	2
chr20	3632718	3632719	chunk0109_148_1	4.44156	AR_DHT_Control	chr20	3632220	3632835	-60811332	+	L2a	LINE	L2	2686	3388	-38	2
chr20	3918327	3918328	chunk0109_157_1	41.0048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	3917990	3918379	-60525788	-	L1ME4c	LINE	L1	-367	463	32	2
chr20	3969439	3969440	chunk0109_159_1	9.50609	AR_DHT_Control	chr20	3969274	3969764	-60474403	+	L1MD1	LINE	L1	14	526	-6107	2
chr20	3976889	3976890	chunk0109_160_1	37.7103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	3976815	3977013	-60467154	+	L1MD1	LINE	L1	6431	6633	0	2
chr20	4029690	4029691	chunk0109_166_1	8.04094	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	4029481	4030676	-60413491	-	L1MD2	LINE	L1	-320	6039	4849	2
chr20	4116188	4116189	chunk0109_168_1	11.2084	AR_DHT_Control	chr20	4115403	4116818	-60327349	-	L1MC5a	LINE	L1	-1081	1696	941	2
chr20	4270241	4270242	chunk0109_174_1	20.80112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	4270171	4270261	-60173906	-	L1MC5a	LINE	L1	-122	2655	2561	2
chr20	4691899	4691900	chunk0109_181_1	40.6363	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	4691768	4692037	-59752130	-	L1M2	LINE	L1	-3308	2835	2567	2
chr20	5033376	5033377	chunk0109_192_1	10.1791	AR_DHT_Control	chr20	5033307	5033416	-59410751	-	MER5A1	DNA	hAT-Charlie	-56	110	1	2
chr20	5070807	5070808	chunk0109_193_1	61.03051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	5070769	5070898	-59373269	-	AluJb	SINE	Alu	-13	299	169	2
chr20	5143382	5143383	chunk0109_202_1	11.8978	AR_DHT_Control	chr20	5143143	5143539	-59300628	+	L1M5	LINE	L1	5329	5746	-416	2
chr20	5181800	5181801	chunk0109_203_1	35.95664	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	5181607	5181975	-59262192	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr20	5234309	5234310	chunk0109_206_1	93.3594	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	5234204	5234610	-59209557	+	Charlie7	DNA	hAT-Charlie	1927	2371	-241	2
chr20	5365764	5365765	chunk0109_210_1	5.6503	AR_DHT_Control	chr20	5365723	5366229	-59077938	-	MER34C_	LTR	ERV1	-79	506	1	2
chr20	5843407	5843408	chunk0109_227_1	14.08801	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	5842469	5843780	-58600387	-	L1MEd	LINE	L1	-1025	1440	36	2
chr20	5868859	5868860	chunk0109_229_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	5868694	5869153	-58575014	-	L2b	LINE	L2	-60	3366	2824	2
chr20	5970669	5970670	chunk0109_235_1	42.7041	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	5970507	5970675	-58473492	-	LTR16C	LTR	ERVL	-296	193	17	2
chr20	5977379	5977380	chunk0109_240_1	46.53074	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	5977222	5977409	-58466758	-	MIRb	SINE	MIR	-19	249	26	2
chr20	6134746	6134747	chunk0109_246_1	7.3267	AR_DHT_Control	chr20	6134573	6135247	-58308920	-	MER54B	LTR	ERVL	0	793	114	2
chr20	6311628	6311629	chunk0109_249_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	6311072	6314651	-58129516	+	L1PA15-16	LINE	L1	12	3219	-3630	2
chr20	6429649	6429650	chunk0109_250_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	6429588	6429907	-58014260	-	L2c	LINE	L2	0	3387	3035	2
chr20	6444821	6444822	chunk0109_251_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	6444766	6444977	-57999190	-	MER6B	DNA	TcMar-Tigger	0	210	1	2
chr20	6616778	6616779	chunk0109_253_1	6.62784	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	6616386	6616822	-57827345	-	MLT1H2	LTR	ERVL-MaLR	-13	542	60	2
chr20	7667425	7667426	chunk0109_257_1	8.31418	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	7667420	7667475	-56776692	+	L2a	LINE	L2	3320	3373	-2	2
chr20	8002141	8002142	chunk0109_261_1	27.9067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	8002136	8002214	-56441953	-	L2b	LINE	L2	-9	3366	3290	2
chr20	8027035	8027036	chunk0109_263_1	21.21474	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	8026586	8027190	-56416977	-	L1M5	LINE	L1	-962	5184	4573	2
chr20	8044643	8044644	chunk0109_266_1	83.9845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	8044640	8044709	-56399458	+	L2b	LINE	L2	3304	3375	0	2
chr20	8051095	8051096	chunk0109_267_1	41.8624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	8051076	8051382	-56392785	+	L1ME3G	LINE	L1	1	306	-2471	2
chr20	8053107	8053108	chunk0109_269_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	8052915	8053481	-56390686	-	MLT1G	LTR	ERVL-MaLR	0	591	1	2
chr20	8094543	8094544	chunk0109_273_1	148.0276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	8094541	8094755	-56349412	-	LTR85b	LTR	Gypsy?	-24	760	543	2
chr20	8132204	8132205	chunk0109_282_1	5.56779	AR_DHT_Control	chr20	8132150	8132248	-56311919	+	G-rich	Low_complexity	Low_complexity	1	98	0	2
chr20	8172963	8172964	chunk0109_284_1	26.44332	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	8172662	8174766	-56269401	+	L1MD2	LINE	L1	138	2341	-4292	2
chr20	8267253	8267254	chunk0109_293_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	8267207	8267607	-56176560	+	LTR16A1	LTR	ERVL	10	456	0	2
chr20	8835215	8835216	chunk0109_306_1	30.0567	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	8835125	8835283	-55608884	-	L2a	LINE	L2	-313	3113	2936	2
chr20	8837665	8837666	chunk0109_308_1	10.0307	AR_DHT_Control	chr20	8836474	8839500	-55604667	+	ERVL-B4-int	LTR	ERVL	5	3155	-2559	2
chr20	9075891	9075892	chunk0109_315_1	151.143	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	9075563	9075915	-55368252	-	MER102b	DNA	hAT-Charlie	-12	319	1	2
chr20	9129430	9129431	chunk0109_318_1	8.41723	AR_DHT_Control	chr20	9129183	9129558	-55314609	+	LTR16C	LTR	ERVL	65	479	-10	2
chr20	9484813	9484814	chunk0109_340_1	10.3257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	9484545	9485031	-54959136	-	MER87B	LTR	ERV1	-8	501	1	2
chr20	9495709	9495710	chunk0109_341_1	7.46309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	9495380	9495839	-54948328	+	MLT1J	LTR	ERVL-MaLR	13	507	-5	2
chr20	9564376	9564377	chunk0110_3_1	21.05582	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	9564337	9564849	-54879318	+	L1ME4a	LINE	L1	5254	5831	-293	2
chr20	9582909	9582910	chunk0110_7_1	12.0688	AR_DHT_Control	chr20	9582059	9584004	-54860163	-	L1MC3	LINE	L1	0	7785	5782	2
chr20	9594521	9594522	chunk0110_8_1	21.05303	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	9594345	9594839	-54849328	+	LTR44	LTR	ERV1	2	519	0	2
chr20	9972854	9972855	chunk0110_11_1	154.7459	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	9972561	9972993	-54471174	+	L1MB7	LINE	L1	5651	6061	-123	2
chr20	10337712	10337713	chunk0110_22_1	16.4902	AR_DHT_Control	chr20	10337419	10337814	-54106353	-	L1MB7	LINE	L1	-92	6092	5698	2
chr20	10453315	10453316	chunk0110_24_1	25.69103	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	10453307	10453333	-53990834	+	(GT)n	Simple_repeat	Simple_repeat	1	26	0	2
chr20	10512179	10512180	chunk0110_31_1	57.345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	10512035	10512247	-53931920	-	MER58A	DNA	hAT-Charlie	0	224	12	2
chr20	10549745	10549746	chunk0110_34_1	36.3358	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	10549645	10549850	-53894317	+	MIRb	SINE	MIR	40	257	-11	2
chr20	10554352	10554353	chunk0110_36_1	117.1199	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	10553994	10555171	-53888996	-	L1ME2	LINE	L1	0	6164	4889	2
chr20	10566701	10566702	chunk0110_39_1	12.257	AR_DHT_Control	chr20	10566529	10567248	-53876919	-	ERVL-E-int	LTR	ERVL	-963	4704	3941	2
chr20	10578657	10578658	chunk0110_42_1	143.0342	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	10578060	10579415	-53864752	-	L1MB8	LINE	L1	0	6178	4802	2
chr20	10777880	10777881	chunk0110_55_1	4.51651	AR_DHT_Control	chr20	10777625	10778077	-53666090	-	LTR16C	LTR	ERVL	-1	567	29	2
chr20	10840593	10840594	chunk0110_58_1	25.7146	AR_DHT_Control	chr20	10840576	10840825	-53603342	-	MIR	SINE	MIR	0	262	4	2
chr20	10976873	10976874	chunk0110_73_1	21.6695	AR_DHT_Control	chr20	10976864	10977031	-53467136	+	MER112	DNA	hAT-Charlie	57	254	-7	2
chr20	11219685	11219686	chunk0110_83_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	11219523	11219787	-53224380	-	LTR37B	LTR	ERV1	0	468	201	2
chr20	11225420	11225421	chunk0110_84_1	4.77556	AR_DHT_Control	chr20	11225385	11225571	-53218596	-	LTR78	LTR	ERV1	-1049	255	67	2
chr20	11259770	11259771	chunk0110_87_1	10.5524	AR_DHT_Control	chr20	11259601	11259780	-53184387	+	MIRb	SINE	MIR	25	228	-40	2
chr20	11289671	11289672	chunk0110_89_1	98.38823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	11289602	11290094	-53154073	+	LTR40a	LTR	ERVL	1	496	-23	2
chr20	11353665	11353666	chunk0110_92_1	6.94032	AR_DHT_Control	chr20	11353051	11353798	-53090369	+	LTR1B	LTR	ERV1	1	824	0	2
chr20	11476464	11476465	chunk0110_98_1	20.24772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	11473976	11477337	-52966830	+	L1MA3	LINE	L1	15	3449	-4116	2
chr20	11678883	11678884	chunk0110_102_1	11.78548	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	11678685	11678917	-52765250	-	MIRc	SINE	MIR	-11	251	1	2
chr20	12113707	12113708	chunk0110_113_1	5.14593	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	12113392	12113898	-52330269	-	MLT1E3	LTR	ERVL-MaLR	-5	619	139	2
chr20	13090772	13090773	chunk0110_127_1	50.2873	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	13090563	13091010	-51353157	-	L1ME3A	LINE	L1	-39	6134	5660	2
chr20	13333827	13333828	chunk0110_129_1	27.69851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	13333777	13333882	-51110285	-	Tigger15a	DNA	TcMar-Tigger	-126	589	474	2
chr20	13551957	13551958	chunk0110_138_1	81.6458	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	13551933	13552068	-50892099	+	HAL1M8	LINE	L1	2792	2926	-65	2
chr20	13564148	13564149	chunk0110_139_1	45.0212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	13563803	13564719	-50879448	+	L1MB3	LINE	L1	4128	5003	-1373	2
chr20	13611309	13611310	chunk0110_141_1	59.6918	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	13611307	13611434	-50832733	+	UCON37	Unknown	Unknown	3	134	-9	2
chr20	13654193	13654194	chunk0110_144_1	26.69082	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	13654148	13654602	-50789565	+	LTR16A2	LTR	ERVL	29	494	-1	2
chr20	13657138	13657139	chunk0110_146_1	4.21023	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	13657076	13657346	-50786821	-	L2a	LINE	L2	-7	3419	3127	2
chr20	13701679	13701680	chunk0110_148_1	101.06233	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	13701214	13701682	-50742485	-	MLT1J	LTR	ERVL-MaLR	-1	511	18	2
chr20	13705320	13705321	chunk0110_150_1	7.80332	AR_DHT_Control	chr20	13704651	13705382	-50738785	+	L1MD	LINE	L1	4091	4842	-1304	2
chr20	13809553	13809554	chunk0110_153_1	7.91804	AR_DHT_Control	chr20	13809330	13811762	-50632405	-	L2b	LINE	L2	-202	3173	470	2
chr20	13842512	13842513	chunk0110_154_1	6.71486	AR_DHT_Control	chr20	13842184	13842689	-50601478	-	MER34B	LTR	ERV1	0	565	5	2
chr20	13946893	13946894	chunk0110_157_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	13946507	13948126	-50496041	+	MER52A	LTR	ERV1	1	1755	0	2
chr20	14054138	14054139	chunk0110_162_1	14.13481	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	14054107	14054151	-50390016	+	L2c	LINE	L2	3245	3288	-99	2
chr20	14069479	14069480	chunk0110_165_1	4.17998	AR_DHT_Control	chr20	14069257	14069513	-50374654	+	MER102a	DNA	hAT-Charlie	62	315	-15	2
chr20	14352192	14352193	chunk0110_176_1	7.35485	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	14350048	14352219	-50091948	-	L1MA2	LINE	L1	-476	5828	3664	2
chr20	14352902	14352903	chunk0110_177_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	14352807	14353028	-50091139	-	L1ME3Cz	LINE	L1	-35	962	732	2
chr20	14423070	14423071	chunk0110_181_1	63.7456	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	14422998	14423387	-50020780	-	L1M4c	LINE	L1	-6170	437	45	2
chr20	14425291	14425292	chunk0110_183_1	5.25527	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	14425117	14427079	-50017088	-	HAL1	LINE	L1	-89	2418	239	2
chr20	14708335	14708336	chunk0110_187_1	19.06224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	14708249	14708466	-49735701	-	MER58A	DNA	hAT-Charlie	-4	220	1	2
chr20	14793013	14793014	chunk0110_196_1	90.5215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	14792977	14793059	-49651108	-	L2b	LINE	L2	-2	3373	3290	2
chr20	14851801	14851802	chunk0110_200_1	4.83532	AR_DHT_Control	chr20	14851753	14851868	-49592299	-	MIR	SINE	MIR	-70	192	53	2
chr20	15005488	15005489	chunk0110_203_1	46.6825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	15005416	15005527	-49438640	-	Tigger14a	DNA	TcMar-Tigger	0	324	209	2
chr20	15338778	15338779	chunk0110_214_1	6.22495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	15338541	15338787	-49105380	-	MIR	SINE	MIR	-4	258	7	2
chr20	15407240	15407241	chunk0110_216_1	4.89968	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	15407089	15407506	-49036661	+	LTR16C	LTR	ERVL	2	487	-2	2
chr20	15818889	15818890	chunk0110_225_1	9.5124	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	15818735	15818949	-48625218	+	L2c	LINE	L2	3171	3386	-1	2
chr20	15954893	15954894	chunk0110_229_1	9.13774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	15954795	15955001	-48489166	-	MIR	SINE	MIR	-6	256	51	2
chr20	16284178	16284179	chunk0110_234_1	10.3925	AR_DHT_Control	chr20	16284017	16284498	-48159669	+	MER65B	LTR	ERV1	1	489	-42	2
chr20	16288334	16288335	chunk0110_235_1	10.7181	AR_DHT_Control	chr20	16288222	16288353	-48155814	+	MIR	SINE	MIR	79	223	-39	2
chr20	16293828	16293829	chunk0110_236_1	6.73207	AR_DHT_Control	chr20	16292998	16293833	-48150334	+	HAL1	LINE	L1	1139	2026	-481	2
chr20	16303625	16303626	chunk0110_237_1	59.9225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	16303618	16303902	-48140265	-	L2a	LINE	L2	-7	3419	3108	2
chr20	16425218	16425219	chunk0110_242_1	109.33995	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	16424822	16425799	-48018368	+	L1MC4	LINE	L1	6489	7505	-537	2
chr20	16462801	16462802	chunk0110_245_1	15.79746	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	16462628	16463311	-47980856	+	LTR9D	LTR	ERV1	1	645	0	2
chr20	16747581	16747582	chunk0110_262_1	117.2804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	16747456	16747591	-47696576	+	L2a	LINE	L2	3283	3425	-1	2
chr20	16939795	16939796	chunk0110_267_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	16939567	16940284	-47503883	+	MER50	LTR	ERV1	12	734	0	2
chr20	17037877	17037878	chunk0110_268_1	17.43216	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	17037876	17038037	-47406130	+	LTR101_Mam	LTR	ERVL	164	326	-503	2
chr20	17369479	17369480	chunk0110_271_1	10.28504	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	17369398	17369551	-47074616	+	(CA)n	Simple_repeat	Simple_repeat	1	154	0	2
chr20	17390059	17390060	chunk0110_273_1	24.36702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	17389771	17390417	-47053750	+	L1ME2	LINE	L1	5497	6163	-1	2
chr20	17515253	17515254	chunk0110_277_1	11.09032	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	17515242	17515640	-46928527	-	LTR106_Mam	LTR	LTR	-186	522	121	2
chr20	17588024	17588025	chunk0110_281_1	7.63982	AR_DHT_Control	chr20	17587964	17588260	-46855907	+	MER4C	LTR	ERV1	161	471	-1	2
chr20	17594605	17594606	chunk0110_282_1	7.97093	AR_DHT_Control	chr20	17594511	17594694	-46849473	-	MLT1J1	LTR	ERVL-MaLR	-272	176	8	2
chr20	17646474	17646475	chunk0110_285_1	6.29759	AR_DHT_Control	chr20	17646390	17646620	-46797547	+	MIR	SINE	MIR	2	248	-14	2
chr20	17759594	17759595	chunk0110_291_1	11.2868	AR_DHT_Control	chr20	17759559	17760433	-46683734	-	L1MD1	LINE	L1	-14	6228	5338	2
chr20	17918095	17918096	chunk0110_294_1	139.98925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	17917885	17918623	-46525544	+	L1MC1	LINE	L1	5586	6333	0	2
chr20	17985785	17985786	chunk0110_301_1	8.27376	AR_DHT_Control	chr20	17985427	17985931	-46458236	+	Tigger3b	DNA	TcMar-Tigger	703	1231	0	2
chr20	18203294	18203295	chunk0110_307_1	40.4293	AR_DHT_Control	chr20	18203182	18203441	-46240726	-	L1M2	LINE	L1	-6424	1142	837	2
chr20	18641331	18641332	chunk0110_315_1	51.16328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	18640930	18642052	-45802115	-	L1MB3	LINE	L1	-128	6055	4964	2
chr20	18721656	18721657	chunk0110_319_1	21.86584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	18720931	18721709	-45722458	-	L1M5	LINE	L1	-1842	4304	3496	2
chr20	19106616	19106617	chunk0110_325_1	5.69781	AR_DHT_Control	chr20	19106503	19106741	-45337426	-	MIRb	SINE	MIR	-24	244	12	2
chr20	19114497	19114498	chunk0110_328_1	38.02227	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	19114406	19115001	-45329166	+	Tigger9b	DNA	TcMar-Tigger	1	624	0	2
chr20	19127073	19127074	chunk0110_333_1	15.358	AR_DHT_Control	chr20	19126116	19127390	-45316777	-	L1MA9	LINE	L1	-561	6711	5425	2
chr20	19276531	19276532	chunk0110_339_1	8.13752	AR_DHT_Control	chr20	19276360	19276622	-45167545	-	Tigger3a	DNA	TcMar-Tigger	0	348	61	2
chr20	19524705	19524706	chunk0110_348_1	99.3949	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	19524658	19524718	-44919449	+	(TTTA)n	Simple_repeat	Simple_repeat	1	61	0	2
chr20	19712861	19712862	chunk0110_354_1	19.29234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	19712701	19713216	-44730951	+	L1ME2z	LINE	L1	5699	6256	-188	2
chr20	19775723	19775724	chunk0110_358_1	11.3519	AR_DHT_Control	chr20	19775542	19775779	-44668388	-	MIRb	SINE	MIR	-15	253	3	2
chr20	19891055	19891056	chunk0110_366_1	39.2765	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	19890696	19891197	-44552970	-	MER110	LTR	ERV1	-19	472	1	2
chr20	20102779	20102780	chunk0110_386_1	29.85983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	20102689	20102811	-44341356	+	LTR16C	LTR	ERVL	350	463	-26	2
chr20	20138754	20138755	chunk0110_387_1	6.89429	AR_DHT_Control	chr20	20135493	20138805	-44305362	-	L1M1	LINE	L1	-4136	3429	1	2
chr20	20150766	20150767	chunk0110_388_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	20149330	20151544	-44292623	+	L1PB1	LINE	L1	1	2274	-4589	2
chr20	20573935	20573936	chunk0110_412_1	15.67609	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	20573440	20574212	-43869955	-	L1ME1	LINE	L1	-10	6169	5391	2
chr20	20816292	20816293	chunk0110_431_1	11.26682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	20815473	20816343	-43627824	-	MER4D1	LTR	ERV1	-42	858	1	2
chr20	20821749	20821750	chunk0110_433_1	5.8664	AR_DHT_Control	chr20	20821698	20822318	-43621849	-	ERV3-16A3_I-int	LTR	ERVL	-1	5225	4609	2
chr20	20823484	20823485	chunk0110_434_1	16.4134	AR_DHT_Control	chr20	20822812	20824050	-43620117	-	ERV3-16A3_I-int	LTR	ERVL	-618	4608	3311	2
chr20	20827235	20827236	chunk0110_435_1	18.0495	AR_DHT_Control	chr20	20826816	20827257	-43616910	-	LTR16C	LTR	ERVL	-4	485	1	2
chr20	20991436	20991437	chunk0110_440_1	6.0927	AR_DHT_Control	chr20	20991351	20991464	-43452703	-	LTR16C	LTR	ERVL	-51	438	332	2
chr20	21056056	21056057	chunk0110_441_1	18.82105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	21055433	21057224	-43386943	+	Charlie7	DNA	hAT-Charlie	320	2274	-338	2
chr20	21279048	21279049	chunk0110_455_1	248.4276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	21278618	21279316	-43164851	+	L1MC4	LINE	L1	7141	7871	-171	2
chr20	21310051	21310052	chunk0110_458_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	21309646	21310727	-43133440	-	L1ME1	LINE	L1	-2762	3557	2390	2
chr20	21314227	21314228	chunk0110_459_1	8.95279	AR_DHT_Control	chr20	21313906	21314508	-43129659	-	L1MB8	LINE	L1	0	7038	6423	2
chr20	21373600	21373601	chunk0110_461_1	8.27376	AR_DHT_Control	chr20	21373306	21373955	-43070212	-	L1ME3A	LINE	L1	-350	5823	5161	2
chr20	21565935	21565936	chunk0110_465_1	14.6219	AR_DHT_Control	chr20	21565841	21565959	-42878208	-	L1ME3B	LINE	L1	-414	5828	5711	2
chr20	21741671	21741672	chunk0111_2_1	19.96902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	21741330	21741845	-42702322	-	L1MEf	LINE	L1	-4242	1958	1472	2
chr20	21751184	21751185	chunk0111_4_1	18.27473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	21751092	21751552	-42692615	-	Tigger3b	DNA	TcMar-Tigger	-745	486	2	2
chr20	21759208	21759209	chunk0111_6_1	7.17788	AR_DHT_Control	chr20	21759190	21759286	-42684881	+	MIRb	SINE	MIR	120	215	-53	2
chr20	21818396	21818397	chunk0111_10_1	17.2212	AR_DHT_Control	chr20	21818063	21818543	-42625624	-	L1ME1	LINE	L1	-75	6104	5599	2
chr20	21873007	21873008	chunk0111_12_1	6.76351	AR_DHT_Control	chr20	21872479	21873193	-42570974	-	L1MC2	LINE	L1	-148	6196	5470	2
chr20	21958085	21958086	chunk0111_16_1	15.2573	AR_DHT_Control	chr20	21958074	21959552	-42484615	-	L1M4	LINE	L1	-627	6051	4535	2
chr20	21994439	21994440	chunk0111_24_1	200.3402	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr20	21994353	21994472	-42449695	+	MIRb	SINE	MIR	138	254	-14	2
chr20	22212300	22212301	chunk0111_34_1	8.03415	AR_DHT_Control	chr20	22211923	22212790	-42231377	-	L1MB3	LINE	L1	-1	6182	5309	2
chr20	22288360	22288361	chunk0111_38_1	11.757	AR_DHT_Control	chr20	22288225	22288480	-42155687	-	HAL1ME	LINE	L1	-2089	376	113	2
chr20	22374318	22374319	chunk0111_46_1	6.98682	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	22374214	22374325	-42069842	-	MIRb	SINE	MIR	-106	162	48	2
chr20	22374318	22374319	chunk0111_46_1	6.98682	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	22374308	22374543	-42069624	-	MIR	SINE	MIR	-14	248	2	2
chr20	22623260	22623261	chunk0111_53_1	5.03761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	22622850	22623262	-41820905	-	LTR16A	LTR	ERVL	-1	450	16	2
chr20	22833668	22833669	chunk0111_61_1	4.4788	AR_DHT_Control	chr20	22832284	22834262	-41609905	+	L1MC1	LINE	L1	4319	6317	-16	2
chr20	22852207	22852208	chunk0111_62_1	25.5067	AR_DHT_Control	chr20	22851812	22857781	-41586386	+	L1MA9	LINE	L1	407	6342	-17	2
chr20	22942921	22942922	chunk0111_63_1	8.9624	AR_DHT_Control	chr20	22942787	22943492	-41500675	+	L1MC4	LINE	L1	7271	8042	0	2
chr20	22972373	22972374	chunk0111_65_1	9.76623	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	22966682	22973202	-41470965	+	L1PB1	LINE	L1	251	6859	-8	2
chr20	22973551	22973552	chunk0111_66_1	10.4905	AR_DHT_Control	chr20	22973474	22973708	-41470459	-	L1MDa	LINE	L1	-2299	4238	4006	2
chr20	23013635	23013636	chunk0111_68_1	7.92341	AR_DHT_Control	chr20	23013514	23013779	-41430388	-	L2b	LINE	L2	-21	3354	3082	2
chr20	23040222	23040223	chunk0111_69_1	7.02986	AR_DHT_Control	chr20	23039867	23040280	-41403887	-	L2a	LINE	L2	-88	3338	2917	2
chr20	23073158	23073159	chunk0111_70_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	23072709	23073332	-41370835	-	L1ME1	LINE	L1	-2	6177	5516	2
chr20	23162484	23162485	chunk0111_78_1	27.0282	AR_DHT_Control	chr20	23162254	23162495	-41281672	+	L2a	LINE	L2	3138	3405	-21	2
chr20	23199998	23199999	chunk0111_79_1	9.24875	AR_DHT_Control	chr20	23199977	23200077	-41244090	+	L1M5	LINE	L1	2717	2823	-3323	2
chr20	23338211	23338212	chunk0111_86_1	42.4065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	23338145	23338479	-41105688	+	L1MEd	LINE	L1	861	1291	-1216	2
chr20	23449193	23449194	chunk0111_91_1	8.58061	AR_DHT_Control	chr20	23449153	23449369	-40994798	+	LTR16C	LTR	ERVL	12	251	-238	2
chr20	23544997	23544998	chunk0111_92_1	7.60463	AR_DHT_Control	chr20	23544866	23545064	-40899103	+	MSTD	LTR	ERVL-MaLR	141	396	0	2
chr20	23596117	23596118	chunk0111_96_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	23596070	23596937	-40847230	-	MER57A-int	LTR	ERV1	-424	5763	4884	2
chr20	23601681	23601682	chunk0111_99_1	79.6753	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	23601592	23601811	-40842356	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr20	23694883	23694884	chunk0111_107_1	40.18442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	23694359	23695327	-40748840	-	LTR5_Hs	LTR	ERVK	0	968	1	2
chr20	23756416	23756417	chunk0111_109_1	15.1335	AR_DHT_Control	chr20	23756279	23757247	-40686920	-	LTR5_Hs	LTR	ERVK	0	968	1	2
chr20	23757086	23757087	chunk0111_110_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	23756279	23757247	-40686920	-	LTR5_Hs	LTR	ERVK	0	968	1	2
chr20	23827653	23827654	chunk0111_111_1	10.4378	AR_DHT_Control	chr20	23827389	23827691	-40616476	-	MER33	DNA	hAT-Charlie	-4	320	6	2
chr20	23866879	23866880	chunk0111_112_1	7.97574	AR_DHT_Control	chr20	23866830	23867015	-40577152	-	L1MA8	LINE	L1	-271	6020	5827	2
chr20	23963955	23963956	chunk0111_114_1	15.9754	AR_DHT_Control	chr20	23962836	23963986	-40480181	-	LOR1-int	LTR	ERV1	-4444	3676	2485	2
chr20	23965444	23965445	chunk0111_115_1	6.21736	AR_DHT_Control	chr20	23964011	23965569	-40478598	-	LOR1-int	LTR	ERV1	-5931	2189	623	2
chr20	23983469	23983470	chunk0111_116_1	10.1791	AR_DHT_Control	chr20	23982640	23983609	-40460558	+	LTR5_Hs	LTR	ERVK	1	968	0	2
chr20	24003158	24003159	chunk0111_117_1	7.91804	AR_DHT_Control	chr20	24002938	24003283	-40440884	+	(ACACAC)n	Simple_repeat	Simple_repeat	1	345	0	2
chr20	24106668	24106669	chunk0111_120_1	7.91029	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	24106444	24107071	-40337096	+	L1ME1	LINE	L1	5450	6176	-3	2
chr20	24165797	24165798	chunk0111_122_1	21.21563	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	24165742	24165924	-40278243	+	Charlie7a	DNA	hAT-Charlie	28	203	-69	2
chr20	24930569	24930570	chunk0111_138_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	24927944	24932579	-39511588	+	HERVE-int	LTR	ERV1	1975	6705	-1108	2
chr20	25017539	25017540	chunk0111_145_1	28.63825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25017532	25017674	-39426493	+	MER68C	LTR	ERVL	1	150	-269	2
chr20	25029231	25029232	chunk0111_146_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	25028951	25029702	-39414465	+	L1MB2	LINE	L1	5061	5878	-293	2
chr20	25067836	25067837	chunk0111_153_1	4.8254	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	25067163	25068071	-39376096	+	(CA)n	Simple_repeat	Simple_repeat	1	955	0	2
chr20	25100950	25100951	chunk0111_155_1	32.61208	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25100776	25100997	-39343170	+	MER20	DNA	hAT-Charlie	1	219	0	2
chr20	25116178	25116179	chunk0111_158_1	20.1876	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25116147	25116232	-39327935	+	LTR16A1	LTR	ERVL	61	147	-309	2
chr20	25190692	25190693	chunk0111_162_1	95.9221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	25190595	25190762	-39253405	-	LTR16C	LTR	ERVL	0	489	303	2
chr20	25200325	25200326	chunk0111_164_1	17.8698	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25199486	25200499	-39243668	-	L1MB3	LINE	L1	-7	6777	5673	2
chr20	25221000	25221001	chunk0111_165_1	20.601	AR_DHT_Control	chr20	25220905	25221001	-39223166	+	MIR	SINE	MIR	117	229	-33	2
chr20	25346036	25346037	chunk0111_183_1	116.37382	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25345384	25346646	-39097521	+	L1MC1	LINE	L1	5085	6321	-12	2
chr20	25384809	25384810	chunk0111_187_1	50.427	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	25384783	25384913	-39059254	+	Charlie8	DNA	hAT-Charlie	134	263	-2165	2
chr20	25395244	25395245	chunk0111_189_1	6.94497	AR_DHT_Control	chr20	25394631	25397542	-39046625	-	HERVK3-int	LTR	ERVK	-2	7200	4253	2
chr20	25534514	25534515	chunk0111_192_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	25534407	25534702	-38909465	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	2
chr20	25550611	25550612	chunk0111_193_1	22.60822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	25550342	25551333	-38892834	-	LTR5B	LTR	ERVK	0	1002	1	2
chr20	25744202	25744203	chunk0111_196_1	14.9732	AR_DHT_Control	chr20	25744037	25744988	-38699179	-	ERVL47-int	LTR	ERVL	-3963	1283	320	2
chr20	26101321	26101322	chunk0111_199_1	8.27376	AR_DHT_Control	chr20	26100513	26101416	-38342751	+	L1MEd	LINE	L1	763	1760	-4482	2
chr20	26143870	26143871	chunk0111_202_1	62.2383	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	26142195	26144021	-38300146	-	L1M4b	LINE	L1	-2464	4542	2738	2
chr20	26358791	26358792	chunk0111_207_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	26343062	26364239	-38079928	+	ALR/Alpha	Satellite	centr	1	21213	0	2
chr20	26517103	26517104	chunk0111_209_1	45.0856	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	26500000	26586955	-37857212	+	ALR/Alpha	Satellite	centr	1	87833	-28	2
chr20	28816520	28816521	chunk0111_212_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	28794428	28820603	-35623564	-	ALR/Alpha	Satellite	centr	0	26266	1	2
chr20	28842792	28842793	chunk0111_214_1	59.75374	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	28834094	28843401	-35600766	+	ALR/Alpha	Satellite	centr	1	9305	0	2
chr20	28860259	28860260	chunk0111_216_1	19.6611	Merged_Lncap_AR_Veh	chr20	28859998	28861347	-35582820	-	ALR/Alpha	Satellite	centr	-57	1351	1	2
chr20	28887931	28887932	chunk0111_217_1	5.77445	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	28881198	28889070	-35555097	-	ALR/Alpha	Satellite	centr	-24	7907	1	2
chr20	28898435	28898436	chunk0111_222_1	19.14723	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	28897894	28898964	-35545203	+	(CCATT)n	Simple_repeat	Simple_repeat	2	1073	0	2
chr20	28905399	28905400	chunk0111_223_1	10.7729	Merged_Lncap_AR_Veh	chr20	28900878	28913954	-35530213	+	ALR/Alpha	Satellite	centr	1	13117	0	2
chr20	28956223	28956224	chunk0111_224_1	9.29973	Merged_Lncap_AR_Veh	chr20	28937103	28957213	-35486954	+	ALR/Alpha	Satellite	centr	1	20176	0	2
chr20	29084851	29084852	chunk0111_227_1	5.56779	AR_DHT_Control	chr20	29083833	29085642	-35358525	-	L1MEc	LINE	L1	-979	5334	3367	2
chr20	29119069	29119070	chunk0111_228_1	5.86017	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	29118864	29120141	-35324026	+	LTR53-int	LTR	ERVL	1864	3202	-127	2
chr20	29262933	29262934	chunk0111_232_1	49.98757	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr20	29255343	29271546	-35172621	+	ALR/Alpha	Satellite	centr	1	16238	0	2
chr20	29438481	29438482	chunk0111_237_1	5.13456	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	29438329	29438769	-35005398	+	BSR/Beta	Satellite	Satellite	1	445	-71	2
chr20	29458486	29458487	chunk0111_238_1	11.0171	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	29457766	29459075	-34985092	-	LTR53-int	LTR	ERVL	-129	3200	1859	2
chr20	29868528	29868529	chunk0111_244_1	10.0576	AR_DHT_Control	chr20	29868508	29868588	-34575579	-	MER103C	DNA	hAT-Charlie	-135	162	83	2
chr20	29883976	29883977	chunk0111_246_1	18.67795	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	29883918	29884004	-34560163	+	(CA)n	Simple_repeat	Simple_repeat	1	91	0	2
chr20	29885821	29885822	chunk0111_247_1	20.38226	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	29884850	29900750	-34543417	-	ALR/Alpha	Satellite	centr	-69	15917	1	2
chr20	30519658	30519659	chunk0111_252_1	13.2288	AR_DHT_Control	chr20	30519544	30520660	-33923507	-	ACRO1	Satellite	acro	-55	1121	1	2
chr20	30667547	30667548	chunk0111_253_1	8.27376	AR_DHT_Control	chr20	30666619	30667750	-33776417	+	L1MA5	LINE	L1	4805	5947	-353	2
chr20	30812361	30812362	chunk0111_254_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	30812261	30812435	-33631732	+	G-rich	Low_complexity	Low_complexity	1	176	0	2
chr20	31052134	31052135	chunk0111_258_1	16.4185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	31051526	31057333	-33386834	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	5927	0	2
chr20	31055182	31055183	chunk0111_260_1	29.15023	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr20	31051526	31057333	-33386834	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	5927	0	2
chr20	31060517	31060518	chunk0111_263_1	64.46335	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
chr20	31068324	31068325	chunk0111_265_1	102.6228	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
chr20	31074303	31074304	chunk0111_268_1	50.71237	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
chr20	31075723	31075724	chunk0111_271_1	41.26357	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31055341	31106882	-33337285	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	52344	0	2
chr20	31157817	31157818	chunk0111_273_1	46.6119	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr20	31157036	31159112	-33285055	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	2089	0	2
chr20	31185128	31185129	chunk0111_275_1	27.53075	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31166289	31223332	-33220835	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	57839	0	2
chr20	31187249	31187250	chunk0111_276_1	13.9442	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	31166289	31223332	-33220835	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	57839	0	2
chr20	31622995	31622996	chunk0111_282_1	16.80421	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31622860	31623148	-32821019	+	L1MEf	LINE	L1	123	395	-5847	2
chr20	31652973	31652974	chunk0111_284_1	16.26424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	31652772	31653126	-32791041	-	L1MC5	LINE	L1	-412	8892	8535	2
chr20	31664316	31664317	chunk0111_285_1	101.7474	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	31664290	31664406	-32779761	-	MIR3	SINE	MIR	-48	160	43	2
chr20	32067726	32067727	chunk0111_303_1	309.4726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	32067715	32067973	-32376194	+	MER33	DNA	hAT-Charlie	13	253	-71	2
chr20	32074825	32074826	chunk0111_305_1	77.05781	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	32074765	32075121	-32369046	+	L2b	LINE	L2	3013	3370	-5	2
chr20	32111470	32111471	chunk0111_308_1	13.5467	AR_DHT_Control	chr20	32111442	32111899	-32332268	-	L2a	LINE	L2	0	3426	2934	2
chr20	32227758	32227759	chunk0111_310_1	6.3364	AR_DHT_Control	chr20	32227723	32227810	-32216357	+	L2c	LINE	L2	3300	3387	0	2
chr20	32256752	32256753	chunk0111_313_1	8.21385	AR_DHT_Control	chr20	32256725	32256888	-32187279	-	L3	LINE	CR1	-14	4085	3918	2
chr20	32307249	32307250	chunk0111_317_1	37.85344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	32307048	32307278	-32136889	-	L1MC1	LINE	L1	0	6333	6099	2
chr20	32391195	32391196	chunk0111_325_1	6.0927	AR_DHT_Control	chr20	32391177	32391482	-32052685	-	L1ME1	LINE	L1	-350	6002	5711	2
chr20	32432595	32432596	chunk0111_326_1	13.4818	AR_DHT_Control	chr20	32432084	32432637	-32011530	-	MER68	LTR	ERVL	-1	562	1	2
chr20	32634388	32634389	chunk0111_327_1	68.2369	AR_DHT_Control	chr20	32633999	32634400	-31809767	-	L2c	LINE	L2	0	3387	2979	2
chr20	33010340	33010341	chunk0111_335_1	78.3914	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	33010316	33010380	-31433787	+	MIRb	SINE	MIR	206	268	0	2
chr20	33029062	33029063	chunk0111_337_1	4.49683	AR_DHT_Control	chr20	33028734	33029077	-31415090	+	L2a	LINE	L2	3039	3426	0	2
chr20	33151217	33151218	chunk0111_339_1	5.9324	AR_DHT_Control	chr20	33151204	33151561	-31292606	-	LTR16C	LTR	ERVL	-7	482	118	2
chr20	33165237	33165238	chunk0111_340_1	10.1358	AR_DHT_Control	chr20	33165024	33165429	-31278738	+	ORSL-2b	DNA	hAT-Tip100	62	460	-48	2
chr20	33252154	33252155	chunk0111_345_1	7.36432	AR_DHT_Control	chr20	33252151	33252607	-31191560	-	MER70C	LTR	ERVL	-32	499	1	2
chr20	33386832	33386833	chunk0111_349_1	14.0581	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	33386752	33386952	-31057215	-	MER58A	DNA	hAT-Charlie	0	224	28	2
chr20	33562348	33562349	chunk0111_356_1	7.62275	AR_DHT_Control	chr20	33562323	33562385	-30881782	+	GA-rich	Low_complexity	Low_complexity	1	62	0	2
chr20	33622825	33622826	chunk0111_360_1	17.66253	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	33622825	33622968	-30821199	-	L2c	LINE	L2	-9	3378	3221	2
chr20	33718681	33718682	chunk0111_365_1	22.13176	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	33718647	33718802	-30725365	+	MIRb	SINE	MIR	26	180	-88	2
chr20	33802275	33802276	chunk0111_370_1	15.706	AR_DHT_Control	chr20	33801417	33802381	-30641786	-	L1MB5	LINE	L1	-1195	4951	3953	2
chr20	33820605	33820606	chunk0111_372_1	10.4206	AR_DHT_Control	chr20	33820450	33820688	-30623479	-	L2c	LINE	L2	-4	3422	3153	2
chr20	33910083	33910084	chunk0111_377_1	42.9934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	33910049	33910374	-30533793	-	L1ME1	LINE	L1	-358	5821	5483	2
chr20	33998384	33998385	chunk0111_379_1	61.73649	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	33998135	33998422	-30445745	-	L2b	LINE	L2	-86	3289	3039	2
chr20	34068625	34068626	chunk0111_385_1	8.84555	AR_DHT_Control	chr20	34068553	34068854	-30375313	-	MER115	DNA	hAT-Tip100	0	693	351	2
chr20	34135782	34135783	chunk0111_389_1	7.36432	AR_DHT_Control	chr20	34135593	34136578	-30307589	+	LTR5B	LTR	ERVK	1	1002	0	2
chr20	34159415	34159416	chunk0111_391_1	28.8847	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	34158607	34159549	-30284618	+	LTR5B	LTR	ERVK	1	958	-44	2
chr20	34180351	34180352	chunk0111_393_1	47.9461	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	34180315	34180485	-30263682	+	MER58A	DNA	hAT-Charlie	1	176	-48	2
chr20	34252856	34252857	chunk0111_396_1	104.8759	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	34252111	34253095	-30191072	-	LTR5B	LTR	ERVK	0	1002	22	2
chr20	34264252	34264253	chunk0111_399_1	364.1274	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	34263969	34264789	-30179378	+	Tigger2b_Pri	DNA	TcMar-Tigger	60	874	-194	2
chr20	34270347	34270348	chunk0111_401_1	148.7569	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	34270329	34270361	-30173806	+	(AC)n	Simple_repeat	Simple_repeat	1	33	0	2
chr20	34310677	34310678	chunk0111_403_1	17.95786	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	34310381	34310746	-30133421	+	L1ME4b	LINE	L1	203	431	-461	2
chr20	34759524	34759525	chunk0111_416_1	7.63982	AR_DHT_Control	chr20	34759352	34759969	-29684198	-	L1ME4b	LINE	L1	-300	5823	5468	2
chr20	34771979	34771980	chunk0111_417_1	5.6425	AR_DHT_Control	chr20	34771977	34772042	-29672125	+	MER94	DNA	hAT-Blackjack	42	96	-38	2
chr20	35068237	35068238	chunk0111_430_1	60.4498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	35068107	35068241	-29375926	+	L1ME3A	LINE	L1	6018	6172	-1	2
chr20	35068237	35068238	chunk0111_430_1	60.4498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	35068216	35068540	-29375627	+	L1ME4b	LINE	L1	404	551	-341	2
chr20	35191889	35191890	chunk0111_434_1	28.82839	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35191336	35192013	-29252154	-	L2a	LINE	L2	-21	3405	2684	2
chr20	35263666	35263667	chunk0111_438_1	6.01382	AR_DHT_Control	chr20	35263264	35263726	-29180441	+	L2b	LINE	L2	2924	3384	-3	2
chr20	35269207	35269208	chunk0111_440_1	20.68518	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35269150	35269228	-29174939	-	MIRb	SINE	MIR	-8	260	183	2
chr20	35327347	35327348	chunk0111_445_1	68.82458	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35327337	35327528	-29116639	-	MIRc	SINE	MIR	-41	221	20	2
chr20	35348104	35348105	chunk0111_447_1	6.58746	AR_DHT_Control	chr20	35348020	35348162	-29096005	+	L2a	LINE	L2	3277	3426	0	2
chr20	35373947	35373948	chunk0111_448_1	41.7371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35373888	35374015	-29070152	+	FLAM_A	SINE	Alu	1	123	-19	2
chr20	35742250	35742251	chunk0112_4_1	5.9324	AR_DHT_Control	chr20	35742238	35742278	-28701889	+	(ACACAC)n	Simple_repeat	Simple_repeat	1	41	0	2
chr20	35751667	35751668	chunk0112_6_1	24.51671	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	35751603	35751783	-28692384	+	L1MB5	LINE	L1	5499	5673	-501	2
chr20	35776769	35776770	chunk0112_9_1	11.38137	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35776749	35776880	-28667287	+	MIR3	SINE	MIR	52	183	-25	2
chr20	35901026	35901027	chunk0112_12_1	7.58612	AR_DHT_Control	chr20	35900840	35901135	-28543032	+	L1ME3A	LINE	L1	5875	6162	-11	2
chr20	35991263	35991264	chunk0112_16_1	5.37222	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	35990964	35991376	-28452791	+	MER63D	DNA	hAT-Blackjack	531	927	-3	2
chr20	36112157	36112158	chunk0112_24_1	5.52722	AR_DHT_Control	chr20	36111939	36112160	-28332007	+	L2	LINE	L2	2571	2794	-625	2
chr20	36441509	36441510	chunk0112_30_1	64.3933	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	36441066	36441659	-28002508	+	L2a	LINE	L2	2760	3423	-3	2
chr20	36624445	36624446	chunk0112_33_1	175.4354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	36624315	36624594	-27819573	+	L2a	LINE	L2	3097	3424	-2	2
chr20	36734691	36734692	chunk0112_36_1	25.72245	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	36734636	36734851	-27709316	-	MER20	DNA	hAT-Charlie	-4	215	1	2
chr20	36813933	36813934	chunk0112_41_1	131.3724	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	36813864	36814246	-27629921	+	L2b	LINE	L2	2957	3332	-43	2
chr20	36823221	36823222	chunk0112_42_1	18.58026	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	36823058	36823381	-27620786	+	Helitron3Na_Mam	RC	Helitron	151	463	-23	2
chr20	37097467	37097468	chunk0112_51_1	43.28374	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	37097202	37097480	-27346687	+	AluSz6	SINE	Alu	21	291	-21	2
chr20	37303852	37303853	chunk0112_55_1	207.1632	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	37303568	37304051	-27140116	-	MER68	LTR	ERVL	-4	559	1	2
chr20	37721429	37721430	chunk0112_63_1	23.06442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	37721368	37721526	-26722641	-	L3	LINE	CR1	-1111	2988	2821	2
chr20	37745471	37745472	chunk0112_66_1	41.7642	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	37745452	37745693	-26698474	-	MIR	SINE	MIR	0	262	1	2
chr20	37846509	37846510	chunk0112_75_1	58.9208	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	37846500	37846594	-26597573	+	MIRb	SINE	MIR	170	265	-3	2
chr20	37852912	37852913	chunk0112_76_1	5.8664	AR_DHT_Control	chr20	37852830	37852961	-26591206	-	MIR3	SINE	MIR	-48	160	18	2
chr20	37989878	37989879	chunk0112_81_1	159.6515	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	37989780	37990284	-26453883	+	L4_A_Mam	LINE	RTE-X	4474	4985	-5	2
chr20	38006791	38006792	chunk0112_86_1	28.5354	AR_DHT_Control	chr20	38006494	38006877	-26437290	+	L2c	LINE	L2	2910	3320	-106	2
chr20	38034673	38034674	chunk0112_88_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	38034582	38034698	-26409469	-	MIRb	SINE	MIR	-8	260	143	2
chr20	38060153	38060154	chunk0112_89_1	50.50304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	38060153	38060277	-26383890	-	MIRb	SINE	MIR	-113	155	17	2
chr20	38126139	38126140	chunk0112_99_1	5.56714	AR_DHT_Control	chr20	38126123	38126321	-26317846	-	MIRb	SINE	MIR	-34	234	39	2
chr20	38205107	38205108	chunk0112_101_1	42.6179	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	38204629	38205804	-26238363	-	L1MA9	LINE	L1	-149	6163	5044	2
chr20	38338254	38338255	chunk0112_105_1	6.02617	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	38338209	38338470	-26105697	-	L2a	LINE	L2	-498	2921	2658	2
chr20	38427856	38427857	chunk0112_111_1	27.8907	AR_DHT_Control	chr20	38427723	38428148	-26016019	+	MER68B	LTR	ERVL	67	493	-71	2
chr20	38448577	38448578	chunk0112_113_1	50.15044	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	38448550	38448589	-25995578	-	MIRb	SINE	MIR	-22	246	208	2
chr20	38460418	38460419	chunk0112_121_1	8.57853	AR_DHT_Control	chr20	38460380	38460587	-25983580	+	MamGypLTR1a	LTR	Gypsy	555	774	-10	2
chr20	38491787	38491788	chunk0112_126_1	32.7232	AR_DHT_Control	chr20	38491580	38491800	-25952367	+	MIRc	SINE	MIR	11	245	-23	2
chr20	38502227	38502228	chunk0112_127_1	40.8923	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	38501727	38502592	-25941575	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	836	-232	2
chr20	38571351	38571352	chunk0112_134_1	14.5614	AR_DHT_Control	chr20	38571026	38571973	-25872194	-	L1MA10	LINE	L1	0	6334	5388	2
chr20	38980476	38980477	chunk0112_150_1	8.02791	AR_DHT_Control	chr20	38980331	38980499	-25463668	+	MIR	SINE	MIR	89	262	0	2
chr20	39000286	39000287	chunk0112_153_1	177.1257	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	39000067	39000372	-25443795	+	L2c	LINE	L2	3022	3317	-70	2
chr20	39005684	39005685	chunk0112_154_1	9.09887	AR_DHT_Control	chr20	39005353	39005763	-25438404	+	L2a	LINE	L2	3044	3426	0	2
chr20	39176885	39176886	chunk0112_156_1	6.58135	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	39176868	39177012	-25267155	+	MER96	DNA	hAT-Tip100	1	175	0	2
chr20	39252115	39252116	chunk0112_157_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	39251922	39252137	-25192030	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr20	39855586	39855587	chunk0112_167_1	59.8614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	39855493	39855723	-24588444	+	L1MB1	LINE	L1	5017	5248	-892	2
chr20	40004987	40004988	chunk0112_181_1	33.9788	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	40004957	40005058	-24439109	-	L1M6	LINE	L1	-4796	1700	1603	2
chr20	40067981	40067982	chunk0112_184_1	18.5274	AR_DHT_Control	chr20	40067865	40070482	-24373685	+	L1MA2	LINE	L1	3178	5896	-1669	2
chr20	40415515	40415516	chunk0112_201_1	16.30906	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	40415481	40416116	-24028051	-	L2a	LINE	L2	0	3426	2735	2
chr20	40441996	40441997	chunk0112_203_1	5.3309	AR_DHT_Control	chr20	40441973	40442082	-24002085	-	L2a	LINE	L2	-2	3424	3322	2
chr20	40456067	40456068	chunk0112_204_1	12.00092	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	40456055	40456282	-23987885	+	L1ME3C	LINE	L1	5873	6123	0	2
chr20	40468943	40468944	chunk0112_207_1	226.3743	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	40468927	40468974	-23975193	+	L2b	LINE	L2	3325	3369	-6	2
chr20	40655057	40655058	chunk0112_216_1	48.5242	AR_DHT_Control	chr20	40655031	40655125	-23789042	-	CR1-L3A_Croc	LINE	CR1	-542	3746	3647	2
chr20	40664284	40664285	chunk0112_217_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	40664201	40664323	-23779844	+	(TCTCCA)n	Simple_repeat	Simple_repeat	1	132	0	2
chr20	40892770	40892771	chunk0112_223_1	169.0898	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	40892466	40892915	-23551252	-	LTR16A2	LTR	ERVL	0	495	53	2
chr20	40903625	40903626	chunk0112_225_1	10.5451	AR_DHT_Control	chr20	40903411	40903726	-23540441	-	L2a	LINE	L2	-234	3192	2883	2
chr20	41003220	41003221	chunk0112_226_1	20.6159	AR_DHT_Control	chr20	41003054	41003341	-23440826	-	MLT1I	LTR	ERVL-MaLR	-109	302	3	2
chr20	41047269	41047270	chunk0112_228_1	5.54895	AR_DHT_Control	chr20	41047217	41047524	-23396643	+	Tigger3a	DNA	TcMar-Tigger	2	321	-27	2
chr20	41192089	41192090	chunk0112_235_1	6.01382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	41190470	41193167	-23251000	-	L1MA4A	LINE	L1	-4000	3209	1	2
chr20	41533715	41533716	chunk0112_245_1	10.3813	AR_DHT_Control	chr20	41533651	41533763	-22910404	-	L2b	LINE	L2	-4	3371	3263	2
chr20	42001883	42001884	chunk0112_253_1	5.66005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	42000003	42002382	-22441785	-	L1M2	LINE	L1	-4541	2308	1	2
chr20	42115086	42115087	chunk0112_256_1	5.6503	AR_DHT_Control	chr20	42114755	42115147	-22329020	+	L2b	LINE	L2	3004	3374	-1	2
chr20	42488083	42488084	chunk0112_258_1	10.3593	AR_DHT_Control	chr20	42487880	42488610	-21955557	-	L1ME5	LINE	L1	-151	6043	5261	2
chr20	42497128	42497129	chunk0112_259_1	10.7367	AR_DHT_Control	chr20	42495847	42497454	-21946713	-	Tigger2	DNA	TcMar-Tigger	0	2718	1062	2
chr20	42514104	42514105	chunk0112_260_1	30.6367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	42513630	42514358	-21929809	-	L1ME3E	LINE	L1	-46	6196	5416	2
chr20	43183831	43183832	chunk0112_269_1	9.28589	AR_DHT_Control	chr20	43183533	43184122	-21260045	-	L1MB7	LINE	L1	-39	6145	5536	2
chr20	43388615	43388616	chunk0112_272_1	25.6468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	43388432	43388632	-21055535	+	Charlie30a	DNA	hAT-Charlie	430	640	-151	2
chr20	43398172	43398173	chunk0112_274_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	43398100	43398405	-21045762	+	AluJo	SINE	Alu	1	297	-15	2
chr20	43411187	43411188	chunk0112_275_1	7.2534	AR_DHT_Control	chr20	43409866	43411511	-21032656	+	L1P4	LINE	L1	3511	5193	-953	2
chr20	43466705	43466706	chunk0112_277_1	17.14643	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	43466557	43466739	-20977428	-	L1MC5	LINE	L1	-13	9291	9059	2
chr20	43624319	43624320	chunk0112_280_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	43624279	43624388	-20819779	+	MER81	DNA	hAT-Blackjack	6	111	-3	2
chr20	43632685	43632686	chunk0112_281_1	47.26227	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	43632560	43632723	-20811444	+	L2a	LINE	L2	3257	3416	-10	2
chr20	43779488	43779489	chunk0112_286_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	43779289	43779551	-20664616	+	ERVL-E-int	LTR	ERVL	4175	4459	-1255	2
chr20	43918927	43918928	chunk0112_290_1	10.8721	AR_DHT_Control	chr20	43918868	43918972	-20525195	+	MIR	SINE	MIR	149	266	-2	2
chr20	44092898	44092899	chunk0112_294_1	157.0827	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	44092727	44093027	-20351140	-	L1MEc	LINE	L1	-5808	592	229	2
chr20	44104230	44104231	chunk0112_297_1	23.08732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	44104133	44104254	-20339913	-	L2a	LINE	L2	-69	3357	3198	2
chr20	44319901	44319902	chunk0112_302_1	6.48643	AR_DHT_Control	chr20	44319823	44319906	-20124261	+	L1MC5	LINE	L1	8062	8149	-1155	2
chr20	44446357	44446358	chunk0112_305_1	7.54274	AR_DHT_Control	chr20	44446076	44446406	-19997761	+	L2a	LINE	L2	2817	3164	-262	2
chr20	44450451	44450452	chunk0112_306_1	11.16211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	44450381	44450509	-19993658	+	L2c	LINE	L2	3032	3164	-223	2
chr20	44508799	44508800	chunk0112_310_1	15.9864	AR_DHT_Control	chr20	44508678	44508801	-19935366	+	L1ME3E	LINE	L1	5815	5941	-301	2
chr20	44517875	44517876	chunk0112_311_1	20.0548	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	44517791	44517887	-19926280	+	L2c	LINE	L2	3283	3383	-4	2
chr20	44532594	44532595	chunk0112_313_1	54.05441	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	44532482	44533091	-19911076	-	L2c	LINE	L2	-10	3377	2793	2
chr20	44701445	44701446	chunk0112_318_1	6.26854	AR_DHT_Control	chr20	44701436	44701601	-19742566	+	MIR	SINE	MIR	4	187	-75	2
chr20	44708629	44708630	chunk0112_320_1	18.42512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	44707974	44708772	-19735395	+	L1M5	LINE	L1	3554	4361	-1785	2
chr20	44714408	44714409	chunk0112_322_1	134.1995	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	44714278	44714680	-19729487	+	L2b	LINE	L2	2951	3345	-30	2
chr20	44945430	44945431	chunk0112_327_1	9.61425	AR_DHT_Control	chr20	44945303	44945829	-19498338	+	MLT1G	LTR	ERVL-MaLR	12	562	-29	2
chr20	45000123	45000124	chunk0112_333_1	93.95185	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	45000046	45000146	-19444021	-	MER20B	DNA	hAT-Charlie	-680	103	2	2
chr20	45057186	45057187	chunk0112_339_1	8.21408	AR_DHT_Control	chr20	45056688	45057213	-19386954	-	LTR41B	LTR	ERVL	0	758	227	2
chr20	45104760	45104761	chunk0112_341_1	13.7322	AR_DHT_Control	chr20	45104638	45104765	-19339402	+	MIRb	SINE	MIR	59	187	-81	2
chr20	45114876	45114877	chunk0112_344_1	12.982	AR_DHT_Control	chr20	45114855	45114908	-19329259	+	(CA)n	Simple_repeat	Simple_repeat	1	54	0	2
chr20	45131515	45131516	chunk0112_345_1	148.9157	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	45131444	45131544	-19312623	+	MER20	DNA	hAT-Charlie	120	219	0	2
chr20	45157892	45157893	chunk0112_347_1	7.36432	AR_DHT_Control	chr20	45157313	45158400	-19285767	+	L1M3de	LINE	L1	147	1234	-5419	2
chr20	45236089	45236090	chunk0112_351_1	12.18307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	45233449	45236794	-19207373	-	L1M2c	LINE	L1	-3024	4538	784	2
chr20	45258029	45258030	chunk0112_352_1	20.5228	AR_DHT_Control	chr20	45257832	45258041	-19186126	+	MIRb	SINE	MIR	23	239	-29	2
chr20	45329849	45329850	chunk0112_353_1	34.01614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	45329813	45329977	-19114190	-	MIRc	SINE	MIR	-25	243	69	2
chr20	45383075	45383076	chunk0112_359_1	17.06251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	45382638	45383661	-19060506	-	L1ME1	LINE	L1	0	6179	5135	2
chr20	45449618	45449619	chunk0112_361_1	33.9899	AR_DHT_Control	chr20	45449465	45449870	-18994297	-	MLT1C	LTR	ERVL-MaLR	-2	465	1	2
chr20	45621508	45621509	chunk0112_368_1	22.3697	AR_DHT_Control	chr20	45621412	45621977	-18822190	+	MER68	LTR	ERVL	8	563	0	2
chr20	46399561	46399562	chunk0112_385_1	89.40488	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	46399325	46399711	-18044456	+	L2c	LINE	L2	2967	3366	-21	2
chr20	46808807	46808808	chunk0112_395_1	102.51872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	46808681	46808883	-17635284	+	MER58A	DNA	hAT-Charlie	5	215	-9	2
chr20	46832096	46832097	chunk0112_397_1	6.05516	AR_DHT_Control	chr20	46831637	46832240	-17611927	-	MLT1G	LTR	ERVL-MaLR	-3	592	1	2
chr20	46977025	46977026	chunk0112_398_1	129.3194	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	46976947	46977192	-17466975	+	L1ME3G	LINE	L1	501	733	-191	2
chr20	46990463	46990464	chunk0112_400_1	5.41601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	46990440	46990486	-17453681	+	(GTGCTCT)n	Simple_repeat	Simple_repeat	1	49	0	2
chr20	47009178	47009179	chunk0112_402_1	101.327	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	47009173	47009215	-17434952	+	(CA)n	Simple_repeat	Simple_repeat	1	42	0	2
chr20	47030176	47030177	chunk0112_405_1	103.0844	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	47030127	47030335	-17413832	-	MER20B	DNA	hAT-Charlie	-526	257	29	2
chr20	47080051	47080052	chunk0112_407_1	16.21619	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	47079987	47080389	-17363778	+	L1ME1	LINE	L1	2639	3038	-3108	2
chr20	47181429	47181430	chunk0112_410_1	7.36432	AR_DHT_Control	chr20	47181151	47181535	-17262632	-	MLT1J2	LTR	ERVL-MaLR	0	448	55	2
chr20	47252981	47252982	chunk0112_411_1	54.1502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	47252934	47253095	-17191072	-	MER58A	DNA	hAT-Charlie	-30	194	9	2
chr20	47304437	47304438	chunk0112_415_1	28.67171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	47304294	47304519	-17139648	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr20	47334331	47334332	chunk0112_420_1	252.0167	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	47334325	47334627	-17109540	+	L1MB8	LINE	L1	5827	6152	-207	2
chr20	47341113	47341114	chunk0112_423_1	5.00158	AR_DHT_Control	chr20	47341028	47341254	-17102913	+	L1MC3	LINE	L1	6428	6682	-1103	2
chr20	47464587	47464588	chunk0112_427_1	136.3473	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	47464540	47464693	-16979474	+	MLT1J1	LTR	ERVL-MaLR	58	214	-197	2
chr20	47484851	47484852	chunk0112_429_1	6.48643	AR_DHT_Control	chr20	47484648	47484983	-16959184	-	MER113	DNA	hAT-Charlie	-2	519	205	2
chr20	47501603	47501604	chunk0112_430_1	6.04605	AR_DHT_Control	chr20	47501516	47501634	-16942533	+	MIR	SINE	MIR	111	262	0	2
chr20	47527644	47527645	chunk0112_432_1	13.6789	AR_DHT_Control	chr20	47527284	47527903	-16916264	-	L1ME1	LINE	L1	-208	5971	5318	2
chr20	47599207	47599208	chunk0112_434_1	7.72091	AR_DHT_Control	chr20	47599186	47599565	-16844602	+	L1MB8	LINE	L1	5830	6178	0	2
chr20	47606056	47606057	chunk0112_435_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	47605997	47606143	-16838024	-	AluJo	SINE	Alu	-162	150	1	2
chr20	47894993	47894994	chunk0112_440_1	61.18605	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	47894551	47896103	-16548064	-	D20S16	Satellite	Satellite	-13	1558	1	2
chr20	47925327	47925328	chunk0112_444_1	15.77283	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	47925260	47925717	-16518450	+	LTR16C	LTR	ERVL	1	489	0	2
chr20	48002498	48002499	chunk0112_445_1	6.13992	AR_DHT_Control	chr20	48002421	48002959	-16441208	-	LOR1a	LTR	ERV1	0	497	1	2
chr20	48803876	48803877	chunk0112_451_1	6.67113	AR_DHT_Control	chr20	48803837	48803980	-15640187	+	MLT1K	LTR	ERVL-MaLR	454	595	0	2
chr20	49200221	49200222	chunk0113_2_1	38.4053	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	49200009	49200316	-15243851	+	L1MC3	LINE	L1	5520	5823	-1962	2
chr20	49200701	49200702	chunk0113_3_1	7.37742	AR_DHT_Control	chr20	49200622	49200785	-15243382	+	L1MC3	LINE	L1	5824	5983	-1802	2
chr20	49287147	49287148	chunk0113_6_1	5.87933	AR_DHT_Control	chr20	49287070	49287514	-15156653	-	LTR10B1	LTR	ERV1	0	547	1	2
chr20	49330490	49330491	chunk0113_7_1	5.6503	AR_DHT_Control	chr20	49330354	49330570	-15113597	-	MIR	SINE	MIR	-10	252	26	2
chr20	49418294	49418295	chunk0113_13_1	81.0248	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	49418275	49418619	-15025548	-	MamRep4096	DNA	hAT-Tip100	-68	358	42	2
chr20	49515802	49515803	chunk0113_18_1	77.7286	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	49515573	49515887	-14928280	+	L1ME4b	LINE	L1	399	715	-177	2
chr20	49604625	49604626	chunk0113_22_1	32.04117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	49604616	49604723	-14839444	+	L2c	LINE	L2	3278	3386	-1	2
chr20	49663055	49663056	chunk0113_25_1	44.65705	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	49662765	49663369	-14780798	+	L1ME3A	LINE	L1	5664	6178	-266	2
chr20	49728627	49728628	chunk0113_30_1	78.39153	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	49728594	49728782	-14715385	-	MER58A	DNA	hAT-Charlie	-32	192	5	2
chr20	49861087	49861088	chunk0113_37_1	9.78876	AR_DHT_Control	chr20	49860806	49861090	-14583077	-	L2a	LINE	L2	0	3426	3068	2
chr20	49868612	49868613	chunk0113_38_1	8.26412	AR_DHT_Control	chr20	49868609	49868798	-14575369	+	MIR	SINE	MIR	8	203	-65	2
chr20	49982207	49982208	chunk0113_44_1	9.04976	AR_DHT_Control	chr20	49982120	49982378	-14461789	+	L2b	LINE	L2	3130	3374	-1	2
chr20	49990346	49990347	chunk0113_45_1	5.85263	AR_DHT_Control	chr20	49990224	49990830	-14453337	-	L2c	LINE	L2	0	3387	2723	2
chr20	50019895	50019896	chunk0113_47_1	16.74754	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	50019873	50019925	-14424242	+	L2c	LINE	L2	3334	3387	0	2
chr20	50071733	50071734	chunk0113_48_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	50071596	50071761	-14372406	-	MIRb	SINE	MIR	0	268	77	2
chr20	50138058	50138059	chunk0113_49_1	14.0808	AR_DHT_Control	chr20	50137890	50138197	-14305970	+	L1MC3	LINE	L1	7457	7784	-1	2
chr20	50142372	50142373	chunk0113_52_1	70.15924	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	50142232	50142451	-14301716	-	L2a	LINE	L2	0	3426	3186	2
chr20	50400347	50400348	chunk0113_60_1	13.214	AR_DHT_Control	chr20	50400065	50400866	-14043301	-	L2a	LINE	L2	-65	3361	2574	2
chr20	50428077	50428078	chunk0113_63_1	4.73472	AR_DHT_Control	chr20	50428007	50428113	-14016054	+	MIR3	SINE	MIR	51	166	-64	2
chr20	50443128	50443129	chunk0113_64_1	5.98896	AR_DHT_Control	chr20	50443001	50443157	-14001010	+	L1ME4b	LINE	L1	494	652	-240	2
chr20	50471522	50471523	chunk0113_65_1	20.99328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	50471157	50471544	-13972623	-	L1ME4b	LINE	L1	-457	435	49	2
chr20	50528332	50528333	chunk0113_71_1	57.43177	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	50528038	50528431	-13915736	+	L2c	LINE	L2	3002	3354	-21	2
chr20	50722081	50722082	chunk0113_82_1	137.3829	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	50721839	50722174	-13721993	+	MLT1C	LTR	ERVL-MaLR	124	441	-26	2
chr20	50741374	50741375	chunk0113_83_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	50741260	50741435	-13702732	+	L2a	LINE	L2	3021	3209	-217	2
chr20	50895399	50895400	chunk0113_93_1	121.5396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	50895159	50895561	-13548606	-	Tigger3	DNA	TcMar-Tigger	0	3029	2576	2
chr20	51122003	51122004	chunk0113_105_1	232.594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	51121842	51122062	-13322105	-	MamRep38	DNA	hAT	-74	221	3	2
chr20	51210417	51210418	chunk0113_108_1	12.8786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	51209962	51210461	-13233706	-	L1ME3	LINE	L1	-32	6130	5595	2
chr20	51245662	51245663	chunk0113_110_1	8.90544	AR_DHT_Control	chr20	51245653	51245679	-13198488	+	(AAAAC)n	Simple_repeat	Simple_repeat	1	26	0	2
chr20	51350986	51350987	chunk0113_111_1	131.2247	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	51350908	51350996	-13093171	+	L1M5	LINE	L1	5713	5800	-324	2
chr20	51386841	51386842	chunk0113_115_1	27.21792	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	51386761	51386855	-13057312	+	MIRb	SINE	MIR	85	194	-74	2
chr20	51486681	51486682	chunk0113_117_1	25.1387	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	51486233	51486698	-12957469	+	L2a	LINE	L2	2883	3425	-1	2
chr20	51491655	51491656	chunk0113_119_1	10.7058	AR_DHT_Control	chr20	51491427	51491672	-12952495	-	MER63B	DNA	hAT-Blackjack	0	436	183	2
chr20	51526248	51526249	chunk0113_122_1	48.03146	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	51526222	51526445	-12917722	+	MER58A	DNA	hAT-Charlie	1	222	-2	2
chr20	51543532	51543533	chunk0113_123_1	18.8333	AR_DHT_Control	chr20	51543253	51543603	-12900564	-	L2a	LINE	L2	-29	3397	2975	2
chr20	51735876	51735877	chunk0113_129_1	86.60281	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	51735834	51736431	-12707736	-	L2b	LINE	L2	0	3375	2746	2
chr20	51954115	51954116	chunk0113_137_1	31.8527	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	51953912	51954127	-12490040	+	L2b	LINE	L2	2971	3191	-184	2
chr20	52013324	52013325	chunk0113_140_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	52012898	52013376	-12430791	-	L2a	LINE	L2	-1	3425	2887	2
chr20	52167910	52167911	chunk0113_142_1	19.18631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	52167745	52167913	-12276254	-	MER113B	DNA	hAT-Charlie	-3	299	111	2
chr20	52186313	52186314	chunk0113_144_1	21.27001	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	52186263	52186332	-12257835	-	L1M5	LINE	L1	-1099	5047	4979	2
chr20	52411925	52411926	chunk0113_146_1	6.09694	AR_DHT_Control	chr20	52411724	52411933	-12032234	+	MER58A	DNA	hAT-Charlie	6	217	-7	2
chr20	52606538	52606539	chunk0113_152_1	208.2175	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	52606398	52606727	-11837440	+	Tigger6a	DNA	TcMar-Tigger	24	359	-724	2
chr20	52724799	52724800	chunk0113_154_1	154.12	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	52724659	52724865	-11719302	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr20	52834095	52834096	chunk0113_162_1	93.4247	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	52834018	52834210	-11609957	+	L2	LINE	L2	2437	2622	-797	2
chr20	52914931	52914932	chunk0113_165_1	16.86609	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	52914887	52915212	-11528955	+	HERV16-int	LTR	ERVL	733	1059	-3937	2
chr20	53055887	53055888	chunk0113_170_1	64.1717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	53055763	53055983	-11388184	+	MER58A	DNA	hAT-Charlie	1	220	-4	2
chr20	53119317	53119318	chunk0113_173_1	21.06024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	53119269	53119465	-11324702	-	L2c	LINE	L2	0	3387	3187	2
chr20	53138579	53138580	chunk0113_174_1	49.9147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	53138572	53138912	-11305255	+	L2b	LINE	L2	3023	3373	-2	2
chr20	53159800	53159801	chunk0113_176_1	7.52656	AR_DHT_Control	chr20	53159780	53160266	-11283901	-	L2b	LINE	L2	-1	3374	2845	2
chr20	53236336	53236337	chunk0113_181_1	17.40659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	53236295	53236481	-11207686	+	Tigger9a	DNA	TcMar-Tigger	541	729	-3	2
chr20	53263009	53263010	chunk0113_185_1	18.43648	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	53263005	53263067	-11181100	+	(TTGT)n	Simple_repeat	Simple_repeat	1	62	0	2
chr20	53332773	53332774	chunk0113_189_1	22.07044	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	53332743	53332847	-11111320	+	L3	LINE	CR1	3718	3823	-276	2
chr20	53744817	53744818	chunk0113_207_1	11.5514	AR_DHT_Control	chr20	53744812	53744907	-10699260	-	MIRb	SINE	MIR	0	268	160	2
chr20	53785351	53785352	chunk0113_209_1	38.772	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	53785279	53785432	-10658735	+	MER2	DNA	TcMar-Tigger	88	250	-95	2
chr20	53845887	53845888	chunk0113_216_1	22.16084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	53845694	53846469	-10597698	-	L1MC1	LINE	L1	-425	6083	5327	2
chr20	53852370	53852371	chunk0113_218_1	88.1704	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	53852246	53852453	-10591714	-	MER102b	DNA	hAT-Charlie	0	341	126	2
chr20	54355647	54355648	chunk0113_245_1	43.0068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	54355546	54355933	-10088234	-	L2c	LINE	L2	-69	3318	2910	2
chr20	54968424	54968425	chunk0113_248_1	9.63129	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	54968238	54968540	-9475627	-	MER97c	DNA	hAT-Tip100	-11	1118	794	2
chr20	55721844	55721845	chunk0113_255_1	11.5684	AR_DHT_Control	chr20	55721821	55721931	-8722236	+	MER94	DNA	hAT-Blackjack	12	133	-1	2
chr20	56348515	56348516	chunk0113_262_1	115.0512	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	56347950	56348637	-8095530	+	MER67C	LTR	ERV1	1	711	0	2
chr20	56380551	56380552	chunk0113_264_1	53.8395	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	56380384	56380830	-8063337	+	L1MC3	LINE	L1	6914	7402	-383	2
chr20	56652066	56652067	chunk0113_275_1	6.13992	AR_DHT_Control	chr20	56651715	56652170	-7791997	-	L1ME1	LINE	L1	-96	6083	5669	2
chr20	56669135	56669136	chunk0113_276_1	30.8227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	56669060	56669140	-7775027	-	L2a	LINE	L2	-926	2493	2412	2
chr20	56713738	56713739	chunk0113_277_1	10.186	AR_DHT_Control	chr20	56713467	56713742	-7730425	-	L1MD2	LINE	L1	-17	6342	6063	2
chr20	56745364	56745365	chunk0113_278_1	4.49683	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	56745304	56745420	-7698747	+	MER45A	DNA	hAT-Tip100	24	151	-27	2
chr20	56821536	56821537	chunk0113_279_1	29.1239	AR_DHT_Control	chr20	56821453	56821697	-7622470	-	L2a	LINE	L2	-18	3408	3158	2
chr20	56922047	56922048	chunk0113_280_1	6.12218	AR_DHT_Control	chr20	56921907	56922172	-7521995	+	L2c	LINE	L2	2496	2790	-629	2
chr20	57049823	57049824	chunk0113_284_1	13.4006	AR_DHT_Control	chr20	57049785	57049947	-7394220	+	MER53	DNA	hAT	17	185	-8	2
chr20	57061195	57061196	chunk0113_285_1	5.99997	AR_DHT_Control	chr20	57061172	57061299	-7382868	+	MER5B	DNA	hAT-Charlie	48	175	-3	2
chr20	57143945	57143946	chunk0113_287_1	145.8535	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	57143855	57143964	-7300203	+	MIRc	SINE	MIR	113	225	-43	2
chr20	57235377	57235378	chunk0113_288_1	9.17597	AR_DHT_Control	chr20	57234880	57235421	-7208746	-	L1ME3A	LINE	L1	-7	6166	5592	2
chr20	57311845	57311846	chunk0113_289_1	16.2842	AR_DHT_Control	chr20	57311426	57311853	-7132314	-	L1M5	LINE	L1	-1053	5093	4621	2
chr20	57452332	57452333	chunk0113_291_1	7.70791	AR_DHT_Control	chr20	57452279	57452715	-6991452	-	L2a	LINE	L2	-139	3287	2804	2
chr20	57743841	57743842	chunk0113_297_1	9.06816	AR_DHT_Control	chr20	57743829	57744049	-6700118	+	MER58A	DNA	hAT-Charlie	4	224	0	2
chr20	57757979	57757980	chunk0113_300_1	175.554	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	57757938	57758196	-6685971	-	MIR	SINE	MIR	-1	261	6	2
chr20	57773462	57773463	chunk0113_303_1	290.37426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	57773339	57773640	-6670527	-	MER58B	DNA	hAT-Charlie	-2	339	1	2
chr20	57986259	57986260	chunk0113_309_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	57986068	57986300	-6457867	+	L1ME4a	LINE	L1	5590	5830	-294	2
chr20	58123449	58123450	chunk0113_316_1	106.3163	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	58123249	58124755	-6319412	+	L1MC3	LINE	L1	5339	6880	-1080	2
chr20	58140712	58140713	chunk0113_317_1	17.2904	AR_DHT_Control	chr20	58140504	58140946	-6303221	-	MLT1C	LTR	ERVL-MaLR	0	467	6	2
chr20	58319200	58319201	chunk0113_321_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	58319119	58319247	-6124920	+	L1M5	LINE	L1	4917	5055	-1091	2
chr20	58421197	58421198	chunk0113_324_1	22.7274	AR_DHT_Control	chr20	58421084	58421231	-6022936	+	MIRc	SINE	MIR	22	168	-100	2
chr20	58588933	58588934	chunk0113_329_1	18.20379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	58588747	58589125	-5855042	-	L1ME4a	LINE	L1	-143	5981	5602	2
chr20	58638255	58638256	chunk0113_331_1	11.088	AR_DHT_Control	chr20	58638214	58638294	-5805873	-	L2c	LINE	L2	-1	3386	3306	2
chr20	58941978	58941979	chunk0113_349_1	81.2439	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	58941310	58942142	-5502025	-	Cheshire	DNA	hAT-Charlie	-1493	927	1	2
chr20	58942613	58942614	chunk0113_352_1	5.82087	AR_DHT_Control	chr20	58942481	58942724	-5501443	-	L1ME4b	LINE	L1	0	892	651	2
chr20	58956446	58956447	chunk0113_353_1	4.06817	AR_DHT_Control	chr20	58956235	58956718	-5487449	-	Tigger3b	DNA	TcMar-Tigger	0	1231	704	2
chr20	58963458	58963459	chunk0113_354_1	39.0103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	58963158	58964143	-5480024	+	L1MCa	LINE	L1	267	1144	-5364	2
chr20	59098814	59098815	chunk0113_365_1	6.43376	AR_DHT_Control	chr20	59098185	59099200	-5344967	-	L1MC1	LINE	L1	-5	6503	5469	2
chr20	59347703	59347704	chunk0113_374_1	109.9616	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr20	59347439	59348434	-5095733	-	L1MC3	LINE	L1	-601	7184	6176	2
chr20	59942792	59942793	chunk0113_382_1	8.23158	AR_DHT_Control	chr20	59942684	59942813	-4501354	+	MIR	SINE	MIR	50	174	-88	2
chr20	60044815	60044816	chunk0113_390_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	60044770	60044902	-4399265	+	L1M2	LINE	L1	5173	5305	-838	2
chr20	60072072	60072073	chunk0113_394_1	30.2665	AR_DHT_Control	chr20	60071503	60073056	-4371111	-	L1ME3G	LINE	L1	-2342	435	2	2
chr20	60216529	60216530	chunk0113_396_1	43.8462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	60216477	60216750	-4227417	+	L1ME4b	LINE	L1	547	852	-40	2
chr20	60300253	60300254	chunk0113_397_1	20.61532	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	60300174	60300534	-4143633	+	Tigger13a	DNA	TcMar-Tigger	167	549	-222	2
chr20	61115491	61115492	chunk0113_405_1	17.31594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr20	61115446	61115589	-3328578	+	L2a	LINE	L2	3247	3423	-3	2
chr20	61755564	61755565	chunk0113_415_1	7.47392	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	61755267	61755833	-2688334	+	(AC)n	Simple_repeat	Simple_repeat	2	581	0	2
chr20	61859342	61859343	chunk0113_419_1	8.41723	AR_DHT_Control	chr20	61858578	61859764	-2584403	-	L1MD2	LINE	L1	-362	5997	4769	2
chr20	62202372	62202373	chunk0113_426_1	44.6757	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	62202324	62202463	-2241704	+	AluJb	SINE	Alu	172	310	-2	2
chr20	62838331	62838332	chunk0113_448_1	19.93442	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	62838169	62838497	-1605670	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr20	62916655	62916656	chunk0114_371_1	40.119	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr20	62916422	62917041	-1527126	-	Charlie1a	DNA	hAT-Charlie	-2	1453	734	2
chr20	62957871	62957872	chunk0114_377_1	6.56183	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	62957652	62958149	-1486018	+	(GTGC)n	Simple_repeat	Simple_repeat	1	501	0	2
chr20	63061509	63061510	chunk0114_379_1	13.77854	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	63061118	63062203	-1381964	+	(TCCGTG)n	Simple_repeat	Simple_repeat	1	1143	0	2
chr20	63210048	63210049	chunk0114_391_1	38.0893	AR_DHT_Control	chr20	63209744	63210221	-1233946	-	Tigger3b	DNA	TcMar-Tigger	-693	538	25	2
chr20	63231073	63231074	chunk0114_392_1	6.84874	AR_DHT_Control	chr20	63230520	63231298	-1212869	-	LTR1A2	LTR	ERV1	0	837	54	2
chr20	63387609	63387610	chunk0114_395_1	7.04615	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	63387418	63388241	-1055926	+	(CACATG)n	Simple_repeat	Simple_repeat	1	896	0	2
chr20	63889698	63889699	chunk0114_409_1	4.44731	SRA057177_Lncap_AR_DHT_10nm_4hr	chr20	63889318	63889745	-554422	-	L1MD1	LINE	L1	-30	6212	5797	2
chr20	64233705	64233706	chunk0114_424_1	4.42728	AR_DHT_Control	chr20	64233535	64233748	-210419	-	L2a	LINE	L2	0	3426	3197	2
chr21	5222940	5222941	chunk0114_2_1	11.2177	AR_DHT_Control	chr21	5222745	5222974	-41487009	-	MIRb	SINE	MIR	-13	249	1	2
chr21	5357901	5357902	chunk0114_3_1	7.56428	Merged_Lncap_AR_Veh	chr21	5354787	5367237	-41342746	+	ALR/Alpha	Satellite	centr	1	12445	-8	2
chr21	7258033	7258034	chunk0114_13_1	20.60435	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	7257308	7258070	-39451913	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	762	0	2
chr21	7259133	7259134	chunk0114_18_1	55.68726	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	7258904	7260666	-39449317	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	1766	0	2
chr21	7290121	7290122	chunk0114_20_1	7.75082	Merged_Lncap_AR_Veh	chr21	7286407	7301245	-39408738	+	ALR/Alpha	Satellite	centr	1	14839	-8	2
chr21	7290641	7290642	chunk0114_21_1	19.54011	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	7286407	7301245	-39408738	+	ALR/Alpha	Satellite	centr	1	14839	-8	2
chr21	7292085	7292086	chunk0114_23_1	8.89296	Merged_Lncap_AR_Veh	chr21	7286407	7301245	-39408738	+	ALR/Alpha	Satellite	centr	1	14839	-8	2
chr21	7917123	7917124	chunk0114_24_1	57.8143	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	7915870	7944657	-38765326	+	(ATTCCATTCC)n	Simple_repeat	Simple_repeat	1	29177	0	2
chr21	7917884	7917885	chunk0114_26_1	55.52642	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	7915870	7944657	-38765326	+	(ATTCCATTCC)n	Simple_repeat	Simple_repeat	1	29177	0	2
chr21	7925120	7925121	chunk0114_28_1	14.28342	AR_DHT_Control;Merged_Lncap_AR_Veh	chr21	7915870	7944657	-38765326	+	(ATTCCATTCC)n	Simple_repeat	Simple_repeat	1	29177	0	2
chr21	7926421	7926422	chunk0114_29_1	371.1962	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	7915870	7944657	-38765326	+	(ATTCCATTCC)n	Simple_repeat	Simple_repeat	1	29177	0	2
chr21	8045463	8045464	chunk0114_30_1	11.8303	Merged_Lncap_AR_Veh	chr21	8000000	8049838	-38660145	-	ALR/Alpha	Satellite	centr	-19	50127	1	2
chr21	8216966	8216967	chunk0114_33_1	29.8633	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8214772	8218941	-38491042	+	LSU-rRNA_Hsa	rRNA	rRNA	878	5034	-1	2
chr21	8220011	8220012	chunk0114_34_1	425.5607	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	8219985	8220189	-38489794	+	(TC)n	Simple_repeat	Simple_repeat	1	206	0	2
chr21	8230715	8230716	chunk0114_36_1	47.8596	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8229974	8230765	-38479218	+	(TCTC)n	Simple_repeat	Simple_repeat	2	795	0	2
chr21	8234473	8234474	chunk0114_37_1	427.9378	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr21	8232545	8235312	-38474671	+	(TCTC)n	Simple_repeat	Simple_repeat	1	2784	0	2
chr21	8239182	8239183	chunk0114_38_1	41.2423	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr21	8239092	8239215	-38470768	-	AluSx3	SINE	Alu	-9	302	180	2
chr21	8401734	8401735	chunk0114_39_1	17.6042	Merged_Lncap_AR_Veh	chr21	8397806	8401980	-38308003	+	LSU-rRNA_Hsa	rRNA	rRNA	878	5034	-1	2
chr21	8402064	8402065	chunk0114_40_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8402027	8402068	-38307915	+	(CGTC)n	Simple_repeat	Simple_repeat	1	45	0	2
chr21	8420357	8420358	chunk0114_42_1	184.3887	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	8420171	8420439	-38289544	+	(TCTC)n	Simple_repeat	Simple_repeat	1	268	0	2
chr21	8441205	8441206	chunk0114_46_1	156.6967	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	8441145	8441992	-38267991	+	LSU-rRNA_Hsa	rRNA	rRNA	1	877	-4158	2
chr21	8442359	8442360	chunk0114_47_1	113.8517	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8442036	8446211	-38263772	+	LSU-rRNA_Hsa	rRNA	rRNA	878	5035	0	2
chr21	8443321	8443322	chunk0114_48_1	75.3011	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr21	8442036	8446211	-38263772	+	LSU-rRNA_Hsa	rRNA	rRNA	878	5035	0	2
chr21	8452151	8452152	chunk0114_49_1	125.7882	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	8451874	8452163	-38257820	+	AluSz	SINE	Alu	1	289	-23	2
chr21	8453995	8453996	chunk0114_50_1	224.0211	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	8453825	8454095	-38255888	+	L1PREC2	LINE	L1	5900	6152	-8	2
chr21	8455891	8455892	chunk0114_51_1	75.4452	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr21	8455260	8456884	-38253099	+	(TCTC)n	Simple_repeat	Simple_repeat	1	1629	0	2
chr21	8464800	8464801	chunk0114_52_1	31.3175	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	8464120	8465014	-38244969	+	(CTCT)n	Simple_repeat	Simple_repeat	1	897	0	2
chr21	8465391	8465392	chunk0114_53_1	174.6078	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr21	8465064	8465409	-38244574	+	(CTCT)n	Simple_repeat	Simple_repeat	2	347	0	2
chr21	8881267	8881268	chunk0114_58_1	44.1302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	8881047	8881322	-37828661	+	L1MB7	LINE	L1	5903	6184	0	2
chr21	8883651	8883652	chunk0114_59_1	9.25365	Merged_Lncap_AR_Veh	chr21	8883272	8883775	-37826208	-	L1MB8	LINE	L1	-6	6172	5653	2
chr21	9008859	9008860	chunk0114_62_1	6.03438	AR_DHT_Control	chr21	9008501	9009363	-37700620	+	MSTA-int	LTR	ERVL-MaLR	725	1735	0	2
chr21	9042945	9042946	chunk0114_64_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9037679	9043099	-37666884	-	GSATII	Satellite	centr	-32	5569	1	2
chr21	9100003	9100004	chunk0114_67_1	35.449	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9096387	9100565	-37609418	+	CER	Satellite	Satellite	1	4180	0	2
chr21	9119385	9119386	chunk0114_69_1	9.30377	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9118946	9120155	-37589828	+	MER52A	LTR	ERV1	502	1755	0	2
chr21	9133856	9133857	chunk0114_74_1	7.87427	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9133555	9134731	-37575252	+	L1MA3	LINE	L1	3777	4937	-1209	2
chr21	9154605	9154606	chunk0114_75_1	9.57048	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9154294	9155978	-37554005	-	HERVK14-int	LTR	ERVK	-4207	1889	204	2
chr21	9258098	9258099	chunk0114_86_1	22.51867	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	9258039	9258180	-37451803	+	MER21C	LTR	ERVL	99	234	-634	2
chr21	9309871	9309872	chunk0114_90_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9309716	9310013	-37399970	-	AluSx	SINE	Alu	-12	300	2	2
chr21	9318425	9318426	chunk0114_91_1	10.1282	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9317964	9318489	-37391494	+	MER52A	LTR	ERV1	1211	1755	0	2
chr21	9342039	9342040	chunk0114_99_1	16.96631	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	9341201	9342463	-37367520	-	MER52A	LTR	ERV1	0	1755	1	2
chr21	9539411	9539412	chunk0114_105_1	16.0254	AR_DHT_Control	chr21	9539327	9539487	-37170496	+	MIR	SINE	MIR	54	268	0	2
chr21	9554895	9554896	chunk0114_108_1	32.0441	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	9554844	9554897	-37155086	-	MER66C	LTR	ERV1	-132	423	371	2
chr21	9561239	9561240	chunk0114_111_1	39.7556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	9561219	9562110	-37147873	-	L1MEd	LINE	L1	-4482	1743	771	2
chr21	9586679	9586680	chunk0114_112_1	5.02686	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9586577	9586831	-37123152	+	(TGGTGA)n	Simple_repeat	Simple_repeat	1	269	0	2
chr21	9664241	9664242	chunk0114_118_1	7.30167	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9663369	9664618	-37045365	-	LTR12C	LTR	ERV1	0	1579	3	2
chr21	9669802	9669803	chunk0114_120_1	112.2487	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9668276	9669949	-37040034	+	L2a	LINE	L2	1338	3424	-2	2
chr21	9735531	9735532	chunk0114_125_1	6.03698	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9735358	9736930	-36973053	+	LTR12C	LTR	ERV1	2	1579	0	2
chr21	9819123	9819124	chunk0114_128_1	61.2145	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9817900	9819192	-36890791	-	SST1	Satellite	centr	-1	1562	284	2
chr21	9844291	9844292	chunk0114_129_1	465.1479	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9844132	9844636	-36865347	-	MER70A	LTR	ERVL	0	472	1	2
chr21	9873388	9873389	chunk0114_131_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	9872732	9873528	-36836455	+	L1P4e	LINE	L1	496	1283	-5503	2
chr21	9951919	9951920	chunk0114_132_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	9951866	9951970	-36758013	-	FRAM	SINE	Alu	-10	166	63	2
chr21	9983422	9983423	chunk0114_134_1	8.27376	AR_DHT_Control	chr21	9983383	9983461	-36726522	+	MER45A	DNA	hAT-Tip100	99	177	-1	2
chr21	10025762	10025763	chunk0114_137_1	9.87065	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10025709	10025787	-36684196	-	L2a	LINE	L2	-9	3417	3338	2
chr21	10078250	10078251	chunk0114_138_1	60.116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	10078183	10078611	-36631372	+	MER57C1	LTR	ERV1	1	434	0	2
chr21	10270289	10270290	chunk0114_142_1	105.6055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	10269868	10270342	-36439641	+	HSATI	Satellite	Satellite	90	567	-10	2
chr21	10272425	10272426	chunk0114_143_1	30.5324	Merged_Lncap_AR_Veh	chr21	10272208	10272500	-36437483	+	AluSx3	SINE	Alu	13	289	-22	2
chr21	10325853	10325854	chunk0114_144_1	107.0626	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10325835	10326402	-36383581	-	HSATI	Satellite	Satellite	-10	567	1	2
chr21	10353905	10353906	chunk0114_147_1	18.603	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10349674	10355828	-36354155	-	L1PA4	LINE	L1	-8	6147	7	2
chr21	10359912	10359913	chunk0114_148_1	5.98896	AR_DHT_Control	chr21	10359037	10359925	-36350058	-	L1MA8	LINE	L1	-1	6290	5412	2
chr21	10425853	10425854	chunk0114_151_1	8.68483	Merged_Lncap_AR_Veh	chr21	10425630	10426395	-36283588	-	L1MC5	LINE	L1	-177	9127	8301	2
chr21	10426919	10426920	chunk0114_152_1	7.38669	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	10426490	10427038	-36282945	+	(GTGGTG)n	Simple_repeat	Simple_repeat	1	549	0	2
chr21	10430241	10430242	chunk0114_155_1	7.32717	AR_DHT_Control	chr21	10430091	10430330	-36279653	-	MER20	DNA	hAT-Charlie	0	219	1	2
chr21	10548623	10548624	chunk0114_157_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	10547179	10550221	-36159762	+	L1M2c	LINE	L1	74	2657	-4192	2
chr21	10745858	10745859	chunk0114_162_1	4.17998	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10745670	10769750	-35940233	+	ALR/Alpha	Satellite	centr	1	24096	0	2
chr21	10748741	10748742	chunk0114_163_1	9.50117	Merged_Lncap_AR_Veh	chr21	10745670	10769750	-35940233	+	ALR/Alpha	Satellite	centr	1	24096	0	2
chr21	10814396	10814397	chunk0114_164_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	10808745	10814559	-35895424	-	ALR/Alpha	Satellite	centr	-2	5830	1	2
chr21	13987712	13987713	chunk0114_165_1	19.8997	AR_DHT_Control	chr21	13985940	13987840	-32722143	+	(TGCCC)n	Simple_repeat	Simple_repeat	2	1711	0	2
chr21	14741613	14741614	chunk0114_173_1	6.6833	AR_DHT_Control	chr21	14741579	14741673	-31968310	+	MIRc	SINE	MIR	159	266	-2	2
chr21	14830484	14830485	chunk0114_175_1	16.59899	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	14830457	14830973	-31879010	-	MLT2B4	LTR	ERVL	-6	550	1	2
chr21	14911933	14911934	chunk0114_180_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	14910716	14912750	-31797233	-	L1MA3	LINE	L1	-5362	2203	196	2
chr21	14945380	14945381	chunk0114_182_1	16.26456	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	14944905	14945800	-31764183	+	MER97a	DNA	hAT-Tip100	2	888	-2	2
chr21	15022795	15022796	chunk0114_184_1	32.5712	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	15022695	15023245	-31686738	+	L1MB8	LINE	L1	5528	6176	-2	2
chr21	15076929	15076930	chunk0114_191_1	30.7628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	15076820	15076994	-31632989	-	MIRc	SINE	MIR	-30	238	61	2
chr21	15299858	15299859	chunk0114_199_1	14.5882	AR_DHT_Control	chr21	15299857	15299895	-31410088	+	(CA)n	Simple_repeat	Simple_repeat	1	38	0	2
chr21	15377787	15377788	chunk0114_202_1	8.22827	AR_DHT_Control	chr21	15377589	15378629	-31331354	-	L2a	LINE	L2	-103	3323	2212	2
chr21	15455557	15455558	chunk0114_207_1	21.17651	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	15455234	15456806	-31253177	-	L1PA10	LINE	L1	-4855	1606	3	2
chr21	15485161	15485162	chunk0114_211_1	6.48643	AR_DHT_Control	chr21	15484724	15485223	-31224760	+	LTR53	LTR	ERVL	1	519	0	2
chr21	15659492	15659493	chunk0114_218_1	54.13749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	15659269	15659538	-31050445	-	Zaphod3	DNA	hAT-Tip100	-1922	701	429	2
chr21	15695065	15695066	chunk0114_220_1	8.27376	AR_DHT_Control	chr21	15694758	15695860	-31014123	+	L1MC2	LINE	L1	5200	6332	-12	2
chr21	15875493	15875494	chunk0114_229_1	7.91724	AR_DHT_Control	chr21	15875442	15875690	-30834293	-	L2c	LINE	L2	-24	3363	3064	2
chr21	15959657	15959658	chunk0114_232_1	27.1376	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	15959561	15959896	-30750087	-	MamRTE1	LINE	RTE-BovB	-141	3671	3320	2
chr21	15992475	15992476	chunk0114_240_1	22.18087	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	15992101	15992565	-30717418	-	MLT2B4	LTR	ERVL	-35	647	164	2
chr21	15994264	15994265	chunk0114_241_1	6.5034	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	15993827	15994527	-30715456	+	Arthur1	DNA	hAT-Tip100	2888	3607	-340	2
chr21	16035245	16035246	chunk0114_249_1	5.69781	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	16035187	16035267	-30674716	+	L2a	LINE	L2	3331	3418	-8	2
chr21	16080111	16080112	chunk0114_251_1	336.8716	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr21	16080064	16080179	-30629804	-	L2a	LINE	L2	-4	3422	3305	2
chr21	16144410	16144411	chunk0114_258_1	6.98682	AR_DHT_Control	chr21	16142287	16145222	-30564761	-	L1PA13	LINE	L1	-749	6017	3073	2
chr21	16228799	16228800	chunk0114_269_1	22.04914	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	16224329	16230705	-30479278	+	L1PA7	LINE	L1	1	6464	-5	2
chr21	16319039	16319040	chunk0114_276_1	21.76752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	16318916	16319443	-30390540	-	L2a	LINE	L2	-162	3264	2741	2
chr21	16326102	16326103	chunk0114_277_1	5.6503	AR_DHT_Control	chr21	16326062	16326604	-30383379	-	L2a	LINE	L2	0	3426	2835	2
chr21	16512160	16512161	chunk0114_285_1	17.71205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	16511319	16512236	-30197747	-	L1PA6	LINE	L1	0	6154	5227	2
chr21	16524013	16524014	chunk0114_287_1	14.12911	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	16523965	16524465	-30185518	-	MER34B	LTR	ERV1	0	565	5	2
chr21	16526665	16526666	chunk0114_288_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	16526027	16527219	-30182764	-	HSMAR1	DNA	TcMar-Mariner	-1	1286	73	2
chr21	16530171	16530172	chunk0114_289_1	13.95901	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	16529750	16532553	-30177430	-	L1MD1	LINE	L1	-3618	2919	14	2
chr21	16672966	16672967	chunk0114_293_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	16672922	16673066	-30036917	+	Arthur1C	DNA	hAT-Tip100	221	363	0	2
chr21	16907071	16907072	chunk0114_297_1	9.53979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	16904254	16907120	-29802863	+	L1MA4A	LINE	L1	2627	5475	-828	2
chr21	16962159	16962160	chunk0114_298_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	16961882	16964263	-29745720	-	L1M2a	LINE	L1	-816	6348	3871	2
chr21	17049585	17049586	chunk0114_303_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	17049099	17050022	-29659961	-	LTR27E	LTR	ERV1	-52	1025	1	2
chr21	17106187	17106188	chunk0114_307_1	24.682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	17104293	17106739	-29603244	+	L1PA11	LINE	L1	1	3226	-4377	2
chr21	17118861	17118862	chunk0114_309_1	22.8103	AR_DHT_Control	chr21	17118535	17118950	-29591033	-	MER70B	LTR	ERVL	-144	434	1	2
chr21	17251995	17251996	chunk0114_316_1	30.5111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	17251986	17252197	-29457786	-	MIRc	SINE	MIR	-18	250	14	2
chr21	17280261	17280262	chunk0114_317_1	6.48643	AR_DHT_Control	chr21	17278682	17281983	-29428000	+	L1M1	LINE	L1	14	4409	-3156	2
chr21	17285500	17285501	chunk0114_318_1	21.34471	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	17283130	17287258	-29422725	+	L1PA10	LINE	L1	1546	5706	-647	2
chr21	17435893	17435894	chunk0114_321_1	28.637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	17435617	17436064	-29273919	+	LTR54B	LTR	ERV1	2	497	-1	2
chr21	17541812	17541813	chunk0114_330_1	25.13999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	17541718	17542055	-29167928	-	L1MC4	LINE	L1	-522	7520	7156	2
chr21	17549407	17549408	chunk0114_332_1	5.51262	AR_DHT_Control	chr21	17549330	17549453	-29160530	+	MIRb	SINE	MIR	118	250	-18	2
chr21	17577936	17577937	chunk0114_334_1	8.64577	AR_DHT_Control	chr21	17577745	17578344	-29131639	-	L1MB1	LINE	L1	-109	6059	5443	2
chr21	18080180	18080181	chunk0114_348_1	15.6721	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	18079845	18081398	-28628585	-	L1PB4	LINE	L1	-512	5644	4104	2
chr21	18087386	18087387	chunk0114_349_1	5.33602	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	18086067	18087792	-28622191	-	L1M2a1	LINE	L1	-4806	2310	650	2
chr21	18107377	18107378	chunk0114_351_1	58.5622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	18106794	18107395	-28602588	+	ERVL-E-int	LTR	ERVL	1890	2537	-3130	2
chr21	18133621	18133622	chunk0114_353_1	8.2753	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	18133492	18133951	-28576032	+	LTR40a	LTR	ERVL	19	517	-2	2
chr21	19526055	19526056	chunk0114_357_1	7.36432	AR_DHT_Control	chr21	19526044	19526324	-27183659	+	LTR84b	LTR	ERVL	90	376	-385	2
chr21	19567171	19567172	chunk0114_359_1	61.3046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	19566635	19567216	-27142767	+	LTR75B	LTR	ERVL	1	602	-6	2
chr21	19796657	19796658	chunk0114_360_1	8.03415	AR_DHT_Control	chr21	19796224	19796777	-26913206	-	ERVL-E-int	LTR	ERVL	-2807	2860	2301	2
chr21	19923829	19923830	chunk0114_366_1	8.27376	AR_DHT_Control	chr21	19923750	19924227	-26785756	-	MLT1A0-int	LTR	ERVL-MaLR	-334	1053	529	2
chr21	20232697	20232698	chunk0115_2_1	12.6608	AR_DHT_Control	chr21	20231653	20234989	-26474994	-	L1MA5	LINE	L1	-2	7360	3988	2
chr21	20343876	20343877	chunk0115_5_1	39.0866	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	20343850	20343951	-26366032	-	L2b	LINE	L2	-293	3094	3001	2
chr21	20365604	20365605	chunk0115_10_1	20.6373	AR_DHT_Control	chr21	20365139	20366555	-26343428	-	Tigger2	DNA	TcMar-Tigger	-6	2712	1262	2
chr21	20367759	20367760	chunk0115_11_1	10.5516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	20367665	20368138	-26341845	-	Tigger2	DNA	TcMar-Tigger	-2254	464	1	2
chr21	20377515	20377516	chunk0115_12_1	50.6194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	20377383	20377686	-26332297	-	Tigger3c	DNA	TcMar-Tigger	-1	601	90	2
chr21	20439212	20439213	chunk0115_16_1	143.7684	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	20435517	20439374	-26270609	+	L1PA10	LINE	L1	2427	6351	-2	2
chr21	20569613	20569614	chunk0115_19_1	124.88827	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	20569405	20569653	-26140330	+	L1MB8	LINE	L1	2010	2264	-5253	2
chr21	20793217	20793218	chunk0115_21_1	7.36432	AR_DHT_Control	chr21	20793177	20793235	-25916748	-	MER110A	LTR	ERV1	-207	284	227	2
chr21	20942027	20942028	chunk0115_33_1	6.33484	AR_DHT_Control	chr21	20942018	20942129	-25767854	+	MamRTE1	LINE	RTE-BovB	3434	3555	-257	2
chr21	21135762	21135763	chunk0115_38_1	110.31807	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	21135340	21135984	-25573999	-	MLT1I-int	LTR	ERVL-MaLR	-805	582	1	2
chr21	21190773	21190774	chunk0115_40_1	5.58563	AR_DHT_Control	chr21	21190649	21190845	-25519138	+	MIR	SINE	MIR	5	196	-72	2
chr21	21412241	21412242	chunk0115_59_1	10.1791	AR_DHT_Control	chr21	21412050	21412429	-25297554	-	MLT1B	LTR	ERVL-MaLR	-5	462	4	2
chr21	21698021	21698022	chunk0115_67_1	11.7386	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	21697944	21698200	-25011783	-	FordPrefect	DNA	hAT-Tip100	0	1683	1421	2
chr21	21709163	21709164	chunk0115_68_1	14.2911	AR_DHT_Control	chr21	21709086	21709672	-25000311	+	L1PA4	LINE	L1	5565	6152	-3	2
chr21	21855901	21855902	chunk0115_72_1	32.39363	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	21855663	21856318	-24853665	-	L1PREC2	LINE	L1	-756	5390	4720	2
chr21	22005508	22005509	chunk0115_79_1	11.1716	AR_DHT_Control	chr21	22005496	22005583	-24704400	-	UCON5	Unknown	Unknown	-117	319	234	2
chr21	22033201	22033202	chunk0115_80_1	6.35715	AR_DHT_Control	chr21	22033191	22033471	-24676512	-	ERV3-16A3_I-int	LTR	ERVL	-242	4984	4683	2
chr21	22225442	22225443	chunk0115_85_1	7.2534	AR_DHT_Control	chr21	22225374	22225772	-24484211	+	MER57B1	LTR	ERV1	9	401	0	2
chr21	22325417	22325418	chunk0115_88_1	54.61	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	22325416	22325683	-24384300	-	L2a	LINE	L2	-10	3416	3143	2
chr21	22400250	22400251	chunk0115_93_1	58.3157	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	22400049	22400542	-24309441	+	MER51-int	LTR	ERV1	1474	1956	-3261	2
chr21	22516385	22516386	chunk0115_96_1	30.7266	AR_DHT_Control	chr21	22516266	22516882	-24193101	+	LTR77	LTR	ERV1	1	622	0	2
chr21	22524011	22524012	chunk0115_98_1	128.6346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	22523909	22524071	-24185912	+	L1M5	LINE	L1	3955	4119	-2027	2
chr21	22535747	22535748	chunk0115_99_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	22534986	22540192	-24169791	+	L1PA15	LINE	L1	496	5762	-1004	2
chr21	22609952	22609953	chunk0115_102_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	22609373	22610025	-24099958	-	MER4-int	LTR	ERV1	-2082	2288	988	2
chr21	22769310	22769311	chunk0115_106_1	10.0059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	22769059	22769701	-23940282	-	ERVL-E-int	LTR	ERVL	-35	5632	4931	2
chr21	22782563	22782564	chunk0115_108_1	28.1632	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	22782061	22782744	-23927239	-	L1MEf	LINE	L1	-3059	3260	2523	2
chr21	22869379	22869380	chunk0115_112_1	11.0699	AR_DHT_Control	chr21	22869211	22869757	-23840226	-	L1MA2	LINE	L1	-447	5857	5307	2
chr21	23110339	23110340	chunk0115_123_1	17.07001	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	23110237	23110857	-23599126	+	LOR1-int	LTR	ERV1	5447	6064	-2056	2
chr21	23194153	23194154	chunk0115_124_1	17.10455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	23193790	23194316	-23515667	+	HAL1ME	LINE	L1	863	1474	-991	2
chr21	23407157	23407158	chunk0115_136_1	9.07871	AR_DHT_Control	chr21	23407023	23407203	-23302780	-	MER58A	DNA	hAT-Charlie	-36	188	4	2
chr21	23480771	23480772	chunk0115_143_1	37.5291	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	23480698	23480772	-23229211	-	L2a	LINE	L2	-2	3424	3353	2
chr21	23598344	23598345	chunk0115_149_1	9.90105	AR_DHT_Control	chr21	23597750	23599036	-23110947	+	L1MC1	LINE	L1	5170	6508	0	2
chr21	23672128	23672129	chunk0115_150_1	16.3794	AR_DHT_Control	chr21	23672127	23672212	-23037771	+	MLT1I	LTR	ERVL-MaLR	58	143	-268	2
chr21	23754325	23754326	chunk0115_151_1	16.03436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	23753920	23754501	-22955482	+	LTR80A	LTR	ERVL	1	579	-4	2
chr21	23794213	23794214	chunk0115_153_1	29.85231	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	23794157	23794579	-22915404	+	L1MC5	LINE	L1	6805	7240	-2064	2
chr21	24737589	24737590	chunk0115_163_1	19.3054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	24737264	24737642	-21972341	+	MLT1A0	LTR	ERVL-MaLR	7	365	0	2
chr21	24941834	24941835	chunk0115_165_1	126.062	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	24941598	24942109	-21767874	-	MER74A	LTR	ERVL	0	558	5	2
chr21	25296515	25296516	chunk0115_169_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	25296217	25296690	-21413293	+	MER70A	LTR	ERVL	1	472	0	2
chr21	25297387	25297388	chunk0115_170_1	6.09694	AR_DHT_Control	chr21	25297365	25297395	-21412588	+	(T)n	Simple_repeat	Simple_repeat	1	30	0	2
chr21	25406832	25406833	chunk0115_171_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	25406523	25407541	-21302442	-	L1M1	LINE	L1	-6018	1547	439	2
chr21	25582798	25582799	chunk0115_174_1	9.74833	AR_DHT_Control	chr21	25582093	25582863	-21127120	+	L1ME3Cz	LINE	L1	51	928	-69	2
chr21	25887791	25887792	chunk0115_182_1	54.3966	AR_DHT_Control	chr21	25887594	25887929	-20822054	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	2
chr21	26008589	26008590	chunk0115_185_1	9.50609	AR_DHT_Control	chr21	26008508	26008606	-20701377	-	MER63D	DNA	hAT-Blackjack	-648	413	311	2
chr21	26158888	26158889	chunk0115_195_1	78.39202	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	26158689	26158980	-20551003	+	L2b	LINE	L2	2982	3321	-54	2
chr21	26206409	26206410	chunk0115_199_1	5.95444	AR_DHT_Control	chr21	26206229	26206600	-20503383	+	MER41C	LTR	ERV1	199	521	0	2
chr21	26399459	26399460	chunk0115_202_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	26399163	26399518	-20310465	-	LTR16A1	LTR	ERVL	-85	371	3	2
chr21	26505568	26505569	chunk0115_203_1	14.305	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	26505382	26505612	-20204371	+	MIRb	SINE	MIR	14	260	-8	2
chr21	26637636	26637637	chunk0115_205_1	45.2895	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	26637008	26637731	-20072252	-	L1ME3A	LINE	L1	-137	6036	5313	2
chr21	26887433	26887434	chunk0115_211_1	81.2736	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	26887070	26887486	-19822497	-	L2c	LINE	L2	-1	3386	2913	2
chr21	27000447	27000448	chunk0115_218_1	8.76676	AR_DHT_Control	chr21	27000401	27001008	-19708975	+	L1PA15	LINE	L1	5550	6163	-2	2
chr21	27272683	27272684	chunk0115_230_1	7.3092	AR_DHT_Control	chr21	27272660	27272774	-19437209	-	MamRep605	LTR?	LTR?	-244	605	482	2
chr21	27340764	27340765	chunk0115_235_1	16.93278	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	27340713	27341430	-19368553	+	L1MC1	LINE	L1	5618	6331	-2	2
chr21	27645453	27645454	chunk0115_254_1	19.64907	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	27645378	27645757	-19064226	-	MLT1G	LTR	ERVL-MaLR	0	591	207	2
chr21	27739380	27739381	chunk0115_258_1	6.48643	AR_DHT_Control	chr21	27739122	27739578	-18970405	-	MLT1C	LTR	ERVL-MaLR	0	467	7	2
chr21	27785575	27785576	chunk0115_259_1	7.36432	AR_DHT_Control	chr21	27785256	27785984	-18923999	+	L2a	LINE	L2	2606	3426	0	2
chr21	27802861	27802862	chunk0115_260_1	6.06371	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	27802597	27803190	-18906793	-	LTR50	LTR	ERVL	-42	753	34	2
chr21	27817075	27817076	chunk0115_263_1	17.5522	AR_DHT_Control	chr21	27816938	27817145	-18892838	+	MIR	SINE	MIR	12	260	-2	2
chr21	27872564	27872565	chunk0115_266_1	7.36432	AR_DHT_Control	chr21	27872237	27873723	-18836260	-	L1PA15-16	LINE	L1	-5596	1257	1	2
chr21	27974281	27974282	chunk0115_268_1	7.36432	AR_DHT_Control	chr21	27973477	27974320	-18735663	-	L1PA10	LINE	L1	-813	5333	4472	2
chr21	28035726	28035727	chunk0115_269_1	58.7979	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28035713	28035932	-18674051	-	MER58A	DNA	hAT-Charlie	-6	218	2	2
chr21	28063481	28063482	chunk0115_271_1	20.0108	AR_DHT_Control	chr21	28063266	28063726	-18646257	-	LTR40A1	LTR	ERVL	-74	510	1	2
chr21	28150994	28150995	chunk0115_277_1	9.58304	AR_DHT_Control	chr21	28150833	28152004	-18557979	+	Tigger3b	DNA	TcMar-Tigger	1	1229	-2	2
chr21	28151862	28151863	chunk0115_279_1	215.2502	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28150833	28152004	-18557979	+	Tigger3b	DNA	TcMar-Tigger	1	1229	-2	2
chr21	28186785	28186786	chunk0115_284_1	72.4704	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	28186613	28187108	-18522875	-	MLT1D	LTR	ERVL-MaLR	0	505	5	2
chr21	28201594	28201595	chunk0115_285_1	162.1923	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28201481	28203871	-18506112	+	L1MA1	LINE	L1	4053	6302	0	2
chr21	28226729	28226730	chunk0115_289_1	117.2803	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	28226126	28226732	-18483251	-	L1MC4	LINE	L1	-966	7076	6439	2
chr21	28246086	28246087	chunk0115_290_1	17.3079	AR_DHT_Control	chr21	28245715	28246388	-18463595	+	L1MA3	LINE	L1	5629	6305	0	2
chr21	28323575	28323576	chunk0115_296_1	6.05516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28322884	28324243	-18385740	-	L1MDa	LINE	L1	-3146	3391	2014	2
chr21	28378143	28378144	chunk0115_298_1	14.23545	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28378142	28378186	-18331797	-	MIR	SINE	MIR	-97	165	122	2
chr21	28517350	28517351	chunk0115_305_1	11.7947	AR_DHT_Control	chr21	28516868	28517945	-18192038	+	MER45R	DNA	hAT-Tip100	1	1073	-508	2
chr21	28642904	28642905	chunk0115_314_1	5.51262	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	28642271	28643022	-18066961	-	LTR1C	LTR	ERV1	0	747	1	2
chr21	28859239	28859240	chunk0115_326_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	28858879	28859748	-17850235	-	L1MEj	LINE	L1	-804	1356	429	2
chr21	28874376	28874377	chunk0115_327_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	28873020	28876120	-17833863	-	ERVL-B4-int	LTR	ERVL	-7	5707	2520	2
chr21	28942614	28942615	chunk0115_328_1	7.09019	AR_DHT_Control	chr21	28942588	28942988	-17766995	+	L2c	LINE	L2	2991	3373	-14	2
chr21	29032022	29032023	chunk0115_334_1	5.56779	AR_DHT_Control	chr21	29031759	29032229	-17677754	-	L1MD2	LINE	L1	-2	6357	5885	2
chr21	29103133	29103134	chunk0115_335_1	8.96258	AR_DHT_Control	chr21	29103090	29103306	-17606677	+	MER58A	DNA	hAT-Charlie	2	212	-12	2
chr21	29206206	29206207	chunk0115_345_1	8.18895	AR_DHT_Control	chr21	29206184	29206374	-17503609	-	MamRTE1	LINE	RTE-BovB	-219	3593	3406	2
chr21	29272405	29272406	chunk0115_349_1	64.2117	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	29272252	29272581	-17437402	+	Charlie7	DNA	hAT-Charlie	1524	1885	-727	2
chr21	29436346	29436347	chunk0115_358_1	81.2182	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	29435902	29436371	-17273612	-	MER70C	LTR	ERVL	-12	566	39	2
chr21	30224019	30224020	chunk0115_374_1	28.60166	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	30224006	30224100	-16485883	+	L2b	LINE	L2	3263	3353	-22	2
chr21	30319730	30319731	chunk0115_381_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	30319700	30319744	-16390239	+	(CAGGAAG)n	Simple_repeat	Simple_repeat	1	44	0	2
chr21	30409171	30409172	chunk0115_387_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	30408693	30410680	-16299303	+	L1PA16	LINE	L1	1113	3163	-3686	2
chr21	30535726	30535727	chunk0115_395_1	147.0998	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	30535546	30536013	-16173970	+	MLT1C	LTR	ERVL-MaLR	1	467	0	2
chr21	30649085	30649086	chunk0115_410_1	12.90632	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	30648955	30649255	-16060728	+	L1MC5a	LINE	L1	2089	2403	-374	2
chr21	31110695	31110696	chunk0115_412_1	10.1791	AR_DHT_Control	chr21	31110666	31110808	-15599175	-	MIRb	SINE	MIR	-100	168	24	2
chr21	31410676	31410677	chunk0115_421_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	31410671	31410797	-15299186	+	GA-rich	Low_complexity	Low_complexity	1	128	0	2
chr21	31621569	31621570	chunk0115_423_1	14.7503	AR_DHT_Control	chr21	31621413	31621694	-15088289	-	L1MC4a	LINE	L1	-320	5922	5649	2
chr21	31781975	31781976	chunk0115_428_1	19.662	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	31781527	31782366	-14927617	+	L2b	LINE	L2	2334	3248	-139	2
chr21	31826781	31826782	chunk0115_429_1	15.5881	AR_DHT_Control	chr21	31826346	31827105	-14882878	-	MER49	LTR	ERV1	-14	909	150	2
chr21	31846906	31846907	chunk0115_430_1	7.03782	AR_DHT_Control	chr21	31846891	31847024	-14862959	+	Charlie15a	DNA	hAT-Charlie	77	224	0	2
chr21	31891592	31891593	chunk0115_434_1	6.7814	AR_DHT_Control	chr21	31891402	31891660	-14818323	-	MER57B2	LTR	ERV1	-189	214	1	2
chr21	32159316	32159317	chunk0115_442_1	9.92883	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	32158774	32159528	-14550455	-	MER4B-int	LTR	ERV1	-4474	2284	1504	2
chr21	32200152	32200153	chunk0115_443_1	8.27376	AR_DHT_Control	chr21	32200064	32200285	-14509698	-	MER58A	DNA	hAT-Charlie	-2	222	1	2
chr21	32476085	32476086	chunk0115_450_1	31.3663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	32475935	32476209	-14233774	-	L1MC	LINE	L1	-2345	5537	5255	2
chr21	32655340	32655341	chunk0116_1_1	13.1346	AR_DHT_Control	chr21	32655004	32655368	-14054615	-	CR1_Mam	LINE	CR1	-305	1899	1495	2
chr21	32719137	32719138	chunk0116_9_1	7.92341	AR_DHT_Control	chr21	32719127	32719431	-13990552	+	MER119	DNA	hAT-Charlie	1	320	-263	2
chr21	32739427	32739428	chunk0116_11_1	225.7055	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	32739285	32739497	-13970486	+	MIR	SINE	MIR	31	256	-6	2
chr21	32890508	32890509	chunk0116_19_1	14.1316	AR_DHT_Control	chr21	32890126	32890617	-13819366	+	L1MC5a	LINE	L1	196	752	-140	2
chr21	33017095	33017096	chunk0116_24_1	23.02755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	33017019	33017313	-13692670	+	L1ME4b	LINE	L1	568	892	0	2
chr21	33121747	33121748	chunk0116_27_1	7.48058	AR_DHT_Control	chr21	33121621	33121762	-13588221	-	MamSINE1	SINE	tRNA-RTE	-34	256	91	2
chr21	33273178	33273179	chunk0116_28_1	7.67158	AR_DHT_Control	chr21	33273017	33273238	-13436745	-	Tigger3c	DNA	TcMar-Tigger	0	602	367	2
chr21	33292965	33292966	chunk0116_29_1	149.80813	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	33291606	33293212	-13416771	-	ERV3-16A3_I-int	LTR	ERVL	-969	4257	2592	2
chr21	33331490	33331491	chunk0116_35_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	33330568	33333614	-13376369	+	L1M2a	LINE	L1	399	3616	-3950	2
chr21	33429730	33429731	chunk0116_38_1	12.3053	AR_DHT_Control	chr21	33429465	33429856	-13280127	-	MER68	LTR	ERVL	-85	478	95	2
chr21	33474850	33474851	chunk0116_39_1	12.375	AR_DHT_Control	chr21	33474845	33474945	-13235038	+	L1ME3D	LINE	L1	5996	6111	-131	2
chr21	33657169	33657170	chunk0116_46_1	31.1582	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	33657028	33657281	-13052702	-	L1PA17	LINE	L1	-1	6165	5893	2
chr21	33678372	33678373	chunk0116_47_1	15.1095	AR_DHT_Control	chr21	33677639	33678486	-13031497	+	L2a	LINE	L2	2457	3389	-37	2
chr21	33775195	33775196	chunk0116_51_1	10.4206	AR_DHT_Control	chr21	33775176	33775300	-12934683	-	L2c	LINE	L2	0	3387	3249	2
chr21	34024169	34024170	chunk0116_60_1	108.7403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	34024119	34024346	-12685637	-	L2c	LINE	L2	-36	3351	3113	2
chr21	34033248	34033249	chunk0116_61_1	7.60463	AR_DHT_Control	chr21	34033084	34033447	-12676536	-	L1ME2	LINE	L1	-7	6157	5799	2
chr21	34122204	34122205	chunk0116_64_1	42.32774	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	34122127	34122312	-12587671	-	MER58A	DNA	hAT-Charlie	-28	196	4	2
chr21	34151648	34151649	chunk0116_66_1	8.22827	AR_DHT_Control	chr21	34151348	34151981	-12558002	-	L1ME3Cz	LINE	L1	-229	768	77	2
chr21	34636639	34636640	chunk0116_72_1	7.19831	AR_DHT_Control	chr21	34636330	34636754	-12073229	+	LTR108d_Mam	LTR	ERVL	70	530	-14	2
chr21	34730363	34730364	chunk0116_82_1	40.7364	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	34730350	34730586	-11979397	+	L3b	LINE	CR1	4944	5193	-39	2
chr21	34734861	34734862	chunk0116_85_1	27.45043	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	34734759	34734960	-11975023	+	MamRTE1	LINE	RTE-BovB	3446	3641	-171	2
chr21	34737159	34737160	chunk0116_88_1	178.2947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	34736861	34737522	-11972461	-	L1ME4b	LINE	L1	0	892	208	2
chr21	35425293	35425294	chunk0116_108_1	7.09019	AR_DHT_Control	chr21	35425117	35425344	-11284639	+	MLT1K	LTR	ERVL-MaLR	4	226	-369	2
chr21	35790270	35790271	chunk0116_115_1	12.1886	AR_DHT_Control	chr21	35790171	35790323	-10919660	-	MER58A	DNA	hAT-Charlie	-79	145	2	2
chr21	35815091	35815092	chunk0116_116_1	10.9477	AR_DHT_Control	chr21	35815014	35815263	-10894720	+	L2c	LINE	L2	3114	3387	0	2
chr21	35838648	35838649	chunk0116_117_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	35838130	35839688	-10870295	+	ERV3-16A3_I-int	LTR	ERVL	2016	3579	-1647	2
chr21	36044344	36044345	chunk0116_121_1	24.33238	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	36044262	36044425	-10665558	-	MER58C	DNA	hAT-Charlie	-2	213	40	2
chr21	36127431	36127432	chunk0116_123_1	122.2616	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	36127350	36127456	-10582527	+	L3	LINE	CR1	1773	1892	-2207	2
chr21	36274296	36274297	chunk0116_140_1	17.693	AR_DHT_Control	chr21	36274088	36274488	-10435495	-	L2a	LINE	L2	-527	2892	2433	2
chr21	36332524	36332525	chunk0116_142_1	4.83532	AR_DHT_Control	chr21	36332445	36332776	-10377207	-	MER57C2	LTR	ERV1	-74	360	1	2
chr21	36506220	36506221	chunk0116_153_1	151.9627	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	36505940	36506315	-10203668	+	L1ME4b	LINE	L1	310	700	-192	2
chr21	36509028	36509029	chunk0116_155_1	53.2573	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	36508742	36509118	-10200865	+	MamTip3	DNA	hAT-Tip100	68	469	-31	2
chr21	36858636	36858637	chunk0116_182_1	6.77976	AR_DHT_Control	chr21	36858500	36858835	-9851148	-	L2a	LINE	L2	0	3426	3031	2
chr21	36987954	36987955	chunk0116_188_1	43.8563	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	36987626	36988976	-9721007	-	L1MC4a	LINE	L1	-1226	6656	5198	2
chr21	37105763	37105764	chunk0116_194_1	33.1926	AR_DHT_Control	chr21	37105526	37106602	-9603381	-	L1ME3A	LINE	L1	-26	6147	4945	2
chr21	37247313	37247314	chunk0116_196_1	34.071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	37247278	37247888	-9462095	+	L1ME1	LINE	L1	2009	2500	-3715	2
chr21	37443801	37443802	chunk0116_204_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	37443703	37443993	-9265990	-	MLT1C	LTR	ERVL-MaLR	-170	297	2	2
chr21	37599463	37599464	chunk0116_214_1	62.1309	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	37598884	37599912	-9110071	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1068	0	2
chr21	38121329	38121330	chunk0116_224_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	38121186	38121599	-8588384	-	LTR9	LTR	ERV1	0	612	187	2
chr21	38129875	38129876	chunk0116_225_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	38129829	38129987	-8579996	+	L2b	LINE	L2	3009	3171	-216	2
chr21	38367309	38367310	chunk0116_239_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	38367265	38367725	-8342258	-	MLT1F1	LTR	ERVL-MaLR	-9	582	31	2
chr21	38805820	38805821	chunk0116_252_1	6.03438	AR_DHT_Control	chr21	38805636	38805854	-7904129	+	(CCCCT)n	Simple_repeat	Simple_repeat	1	223	0	2
chr21	39038867	39038868	chunk0116_262_1	4.17998	AR_DHT_Control	chr21	39038644	39039009	-7670974	+	MER44A	DNA	TcMar-Tigger	1	332	-7	2
chr21	39147876	39147877	chunk0116_265_1	8.62865	AR_DHT_Control	chr21	39147679	39148941	-7561042	-	L1ME1	LINE	L1	-1132	5014	3722	2
chr21	39164009	39164010	chunk0116_266_1	26.4596	AR_DHT_Control	chr21	39163984	39164402	-7545581	+	LTR40a	LTR	ERVL	1	518	-1	2
chr21	39183480	39183481	chunk0116_267_1	4.96796	AR_DHT_Control	chr21	39183480	39183542	-7526441	+	(CCCACCG)n	Simple_repeat	Simple_repeat	1	65	0	2
chr21	39197648	39197649	chunk0116_269_1	72.62975	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	39197555	39197802	-7512181	-	Tigger3c	DNA	TcMar-Tigger	-1	601	345	2
chr21	39275657	39275658	chunk0116_272_1	35.031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	39275546	39275744	-7434239	+	L1MA7	LINE	L1	6081	6291	0	2
chr21	39341737	39341738	chunk0116_274_1	11.022	AR_DHT_Control	chr21	39341698	39341982	-7368001	+	Tigger3a	DNA	TcMar-Tigger	23	348	0	2
chr21	39780115	39780116	chunk0116_278_1	22.79722	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	39779439	39780184	-6929799	+	L1MA7	LINE	L1	5528	6277	-14	2
chr21	40521793	40521794	chunk0116_302_1	17.0249	AR_DHT_Control	chr21	40521631	40521997	-6187986	+	L1MA6	LINE	L1	5901	6293	-7	2
chr21	40642184	40642185	chunk0116_309_1	253.613	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	40642095	40642192	-6067791	-	MIRb	SINE	MIR	-128	140	34	2
chr21	40643629	40643630	chunk0116_312_1	27.07507	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	40643591	40643954	-6066029	+	MLT1B	LTR	ERVL-MaLR	1	390	0	2
chr21	40726232	40726233	chunk0116_314_1	17.33591	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	40725832	40726541	-5983442	+	HAL1	LINE	L1	1579	2367	-140	2
chr21	41029139	41029140	chunk0116_317_1	60.0492	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	41028665	41029559	-5680424	-	HAL1ME	LINE	L1	-663	1802	877	2
chr21	41260927	41260928	chunk0116_329_1	33.9667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	41260878	41261259	-5448724	-	L1ME3E	LINE	L1	-288	5954	5521	2
chr21	41313246	41313247	chunk0116_330_1	17.74495	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	41313213	41313465	-5396518	-	L1ME3	LINE	L1	-3	6159	5901	2
chr21	41396576	41396577	chunk0116_336_1	4.9436	AR_DHT_Control	chr21	41396479	41396677	-5313306	+	MIRb	SINE	MIR	48	244	-24	2
chr21	41520768	41520769	chunk0116_343_1	105.49214	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	41520765	41520959	-5189024	-	MIRb	SINE	MIR	-1	267	50	2
chr21	41569015	41569016	chunk0116_353_1	31.30596	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	41568895	41569056	-5140927	-	MIR	SINE	MIR	-33	229	50	2
chr21	41748600	41748601	chunk0116_364_1	21.6136	AR_DHT_Control	chr21	41748560	41748668	-4961315	+	L1MB2	LINE	L1	6054	6164	-7	2
chr21	41767497	41767498	chunk0116_366_1	31.21743	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	41767300	41767725	-4942258	-	L1MD1	LINE	L1	-13	6229	5852	2
chr21	41783544	41783545	chunk0116_367_1	9.66837	AR_DHT_Control	chr21	41783543	41783964	-4926019	+	LTR3B	LTR	ERVK	1	433	-4	2
chr21	41849158	41849159	chunk0116_368_1	7.11634	AR_DHT_Control	chr21	41849128	41849297	-4860686	+	L1ME1	LINE	L1	5935	6106	-73	2
chr21	41965151	41965152	chunk0116_370_1	5.80103	AR_DHT_Control	chr21	41965136	41965294	-4744689	-	L2a	LINE	L2	-1	3425	3258	2
chr21	42167558	42167559	chunk0116_379_1	10.3254	AR_DHT_Control	chr21	42167190	42168047	-4541936	-	L1ME2z	LINE	L1	-86	6531	5518	2
chr21	42177530	42177531	chunk0116_380_1	6.18182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	42177503	42177805	-4532178	-	L1ME3Cz	LINE	L1	-637	360	60	2
chr21	42183997	42183998	chunk0116_381_1	5.28628	AR_DHT_Control	chr21	42183383	42184363	-4525620	+	(TG)n	Simple_repeat	Simple_repeat	1	1054	0	2
chr21	42331155	42331156	chunk0116_389_1	16.4041	AR_DHT_Control	chr21	42331070	42331189	-4378794	-	L2a	LINE	L2	-10	3416	3275	2
chr21	42342203	42342204	chunk0116_390_1	7.4311	AR_DHT_Control	chr21	42341743	42342418	-4367565	-	Tigger3b	DNA	TcMar-Tigger	-539	692	1	2
chr21	42353085	42353086	chunk0116_391_1	10.179	AR_DHT_Control	chr21	42353040	42353463	-4356520	+	L2	LINE	L2	683	1122	-2297	2
chr21	42463110	42463111	chunk0116_398_1	15.1307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	42462794	42463208	-4246775	-	Tigger18a	DNA	TcMar-Tigger	0	852	424	2
chr21	42520775	42520776	chunk0116_403_1	20.05231	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42520678	42521315	-4188668	+	L1MC4a	LINE	L1	6693	7440	-442	2
chr21	42550719	42550720	chunk0116_409_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42550138	42551317	-4158666	+	L1MB8	LINE	L1	3159	4399	-1747	2
chr21	42655736	42655737	chunk0116_411_1	86.99069	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42655566	42655739	-4054244	+	MIRb	SINE	MIR	58	245	-23	2
chr21	42662890	42662891	chunk0116_414_1	4.45241	AR_DHT_Control	chr21	42662443	42663352	-4046631	+	(AC)n	Simple_repeat	Simple_repeat	1	947	0	2
chr21	42716244	42716245	chunk0116_418_1	103.5432	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42715794	42716568	-3993415	-	L1MC2	LINE	L1	-214	6130	5316	2
chr21	42844883	42844884	chunk0116_425_1	25.89774	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr21	42844855	42845085	-3864898	-	LTR41	LTR	ERVL	-477	224	5	2
chr21	42914467	42914468	chunk0116_426_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	42914307	42914532	-3795451	+	HAL1b	LINE	L1	1712	1942	-479	2
chr21	43001543	43001544	chunk0116_431_1	14.5882	AR_DHT_Control	chr21	43001421	43001655	-3708328	+	L2b	LINE	L2	2039	2318	-1101	2
chr21	43640369	43640370	chunk0116_449_1	6.48643	AR_DHT_Control	chr21	43640310	43640757	-3069226	+	L1MD2	LINE	L1	5885	6343	-16	2
chr21	43767302	43767303	chunk0116_451_1	6.44773	AR_DHT_Control	chr21	43767292	43767528	-2942455	+	(CA)n	Simple_repeat	Simple_repeat	1	236	0	2
chr21	43860045	43860046	chunk0116_455_1	16.78065	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	43859630	43860176	-2849807	-	MER41A	LTR	ERV1	0	554	1	2
chr21	43956845	43956846	chunk0117_337_1	6.10072	AR_DHT_Control	chr21	43956845	43957017	-2752966	-	MLT1F1	LTR	ERVL-MaLR	-368	187	10	2
chr21	43959162	43959163	chunk0117_338_1	4.85178	AR_DHT_Control	chr21	43958233	43959528	-2750455	+	(GT)n	Simple_repeat	Simple_repeat	1	1400	0	2
chr21	43979733	43979734	chunk0117_342_1	104.3544	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	43979328	43979754	-2730229	+	L1MEd	LINE	L1	140	550	-6536	2
chr21	44012404	44012405	chunk0117_345_1	3.65712	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	44012379	44012478	-2697505	+	(GCCGG)n	Simple_repeat	Simple_repeat	1	100	0	2
chr21	44024996	44024997	chunk0117_346_1	6.7814	AR_DHT_Control	chr21	44024424	44025238	-2684745	-	L1MC5	LINE	L1	-1521	7783	6910	2
chr21	44054764	44054765	chunk0117_347_1	16.0393	AR_DHT_Control	chr21	44054759	44054800	-2655183	-	L2c	LINE	L2	-79	3308	3268	2
chr21	44795798	44795799	chunk0117_363_1	24.6486	AR_DHT_Control	chr21	44795661	44795857	-1914126	+	L1M4	LINE	L1	5476	5691	-471	2
chr21	44911162	44911163	chunk0117_364_1	5.52722	AR_DHT_Control	chr21	44911137	44911375	-1798608	+	(AC)n	Simple_repeat	Simple_repeat	1	247	0	2
chr21	44939178	44939179	chunk0117_366_1	11.5992	AR_DHT_Control	chr21	44939074	44939206	-1770777	+	L2c	LINE	L2	3216	3342	-45	2
chr21	45009888	45009889	chunk0117_367_1	12.8015	AR_DHT_Control	chr21	45008960	45010899	-1699084	-	L1ME1	LINE	L1	-664	5688	3652	2
chr21	45121167	45121168	chunk0117_378_1	6.03438	AR_DHT_Control	chr21	45120915	45121197	-1588786	-	L1MEd	LINE	L1	-2291	3855	3566	2
chr21	45121739	45121740	chunk0117_379_1	5.89947	AR_DHT_Control	chr21	45121580	45121822	-1588161	-	L1MEd	LINE	L1	-5995	1108	870	2
chr21	45191609	45191610	chunk0117_382_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	45191181	45191795	-1518188	-	L1M5	LINE	L1	-1868	4278	3596	2
chr21	45401415	45401416	chunk0117_389_1	4.76708	AR_DHT_Control	chr21	45401158	45401776	-1308207	-	L1MEc	LINE	L1	-4919	1589	985	2
chr21	45568671	45568672	chunk0117_404_1	32.9093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	45568132	45569463	-1140520	+	L1MC3	LINE	L1	6576	7931	-27	2
chr21	45662566	45662567	chunk0117_408_1	25.73469	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	45662486	45663481	-1046502	+	LTR13	LTR	ERVK	1	1007	0	2
chr21	45751436	45751437	chunk0117_411_1	11.9084	AR_DHT_Control	chr21	45751433	45752871	-957112	-	L1MC5a	LINE	L1	-2920	3226	2590	2
chr21	45797522	45797523	chunk0117_412_1	13.7182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	45797154	45799130	-910853	+	(TGGA)n	Simple_repeat	Simple_repeat	1	1988	0	2
chr21	45814195	45814196	chunk0117_413_1	6.09694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr21	45813919	45814264	-895719	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	858	2
chr21	45818679	45818680	chunk0117_414_1	8.62865	AR_DHT_Control	chr21	45818613	45819305	-890678	+	L1MC1	LINE	L1	5596	6325	-8	2
chr21	45847082	45847083	chunk0117_415_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	45846648	45848053	-861930	-	L1MC4	LINE	L1	-3660	2555	1132	2
chr21	45885835	45885836	chunk0117_417_1	169.9612	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr21	45884775	45886124	-823859	-	L1MDa	LINE	L1	-4306	2327	712	2
chr21	46069355	46069356	chunk0117_423_1	8.85862	AR_DHT_Control	chr21	46068518	46069585	-640398	+	(TGTG)n	Simple_repeat	Simple_repeat	1	1068	0	2
chr21	46379992	46379993	chunk0117_439_1	26.3508	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	46379791	46380141	-329842	-	L1M4	LINE	L1	-6688	829	456	2
chr21	46406726	46406727	chunk0117_440_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr21	46406291	46407334	-302649	-	L1M5	LINE	L1	-1643	4503	3352	2
chr21	46487167	46487168	chunk0117_443_1	45.1574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	46486722	46487240	-222743	+	L1ME3B	LINE	L1	5581	6224	-18	2
chr21	46514781	46514782	chunk0117_448_1	17.13273	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr21	46514655	46515101	-194882	-	L1ME3A	LINE	L1	-2002	5235	4785	2
chr22	10694441	10694442	chunk0117_2_1	105.53987	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	10693575	10695108	-40123360	+	L1MB4	LINE	L1	13	1646	-4961	2
chr22	10727295	10727296	chunk0117_8_1	8.88169	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	10721334	10730387	-40088081	+	(TCCATTCCAT)n	Simple_repeat	Simple_repeat	1	9151	0	2
chr22	11056867	11056868	chunk0117_10_1	10.4785	Merged_Lncap_AR_Veh	chr22	11056703	11057032	-39761436	-	AluSg	SINE	Alu	0	310	2	2
chr22	11066593	11066594	chunk0117_11_1	19.52714	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	11064567	11067436	-39751032	+	REP522	Satellite	telo	1	2719	-1252	2
chr22	11211280	11211281	chunk0117_13_1	70.7345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr22	11211025	11211797	-39606671	-	SAR	Satellite	Satellite	-21	771	1	2
chr22	11211895	11211896	chunk0117_14_1	22.0699	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	11211816	11215499	-39602969	-	SAR	Satellite	Satellite	0	3620	1	2
chr22	11213049	11213050	chunk0117_16_1	68.2706	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr22	11211816	11215499	-39602969	-	SAR	Satellite	Satellite	0	3620	1	2
chr22	11312938	11312939	chunk0117_21_1	5.03748	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	11312594	11313749	-39504719	+	L1PA12	LINE	L1	7	2286	-5333	2
chr22	11342125	11342126	chunk0117_22_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	11341432	11346064	-39472404	+	L1P1	LINE	L1	7	4655	-1491	2
chr22	11356357	11356358	chunk0117_23_1	20.31957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	11356357	11356404	-39462064	+	(GT)n	Simple_repeat	Simple_repeat	1	47	0	2
chr22	11471604	11471605	chunk0117_25_1	4.88663	AR_DHT_Control	chr22	11470125	11471655	-39346813	-	CER	Satellite	Satellite	-6	1533	1	2
chr22	11819033	11819034	chunk0117_26_1	14.2911	AR_DHT_Control	chr22	11818874	11819136	-38999332	+	ACRO1	Satellite	acro	1	262	0	2
chr22	11897145	11897146	chunk0117_27_1	21.585	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	11897053	11897465	-38921003	-	MER61C	LTR	ERV1	0	428	4	2
chr22	11900769	11900770	chunk0117_28_1	43.537	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr22	11900616	11900862	-38917606	-	AluJr	SINE	Alu	-48	264	13	2
chr22	11901229	11901230	chunk0117_29_1	25.796	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	11900875	11902001	-38916467	-	L1MA5	LINE	L1	-354	5946	4805	2
chr22	11926669	11926670	chunk0117_32_1	15.87496	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	11925459	11926763	-38891705	+	L1PA12	LINE	L1	637	2004	-4977	2
chr22	12176228	12176229	chunk0117_42_1	71.4783	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	12175973	12177529	-38640939	+	ACRO1	Satellite	acro	1	1558	0	2
chr22	12389034	12389035	chunk0117_45_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	12388849	12394988	-38423480	+	L1PA3	LINE	L1	174	6325	-3	2
chr22	12691833	12691834	chunk0117_50_1	24.0299	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	12691730	12692720	-38125748	-	BSR/Beta	Satellite	Satellite	-64	987	1	2
chr22	12692403	12692404	chunk0117_51_1	230.0748	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	12691730	12692720	-38125748	-	BSR/Beta	Satellite	Satellite	-64	987	1	2
chr22	16352891	16352892	chunk0117_59_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	16342958	16363362	-34455106	+	(GGAAT)n	Simple_repeat	Simple_repeat	1	20423	0	2
chr22	16465509	16465510	chunk0117_61_1	36.1239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	16465497	16469258	-34349210	+	L1PA15	LINE	L1	2478	6135	-650	2
chr22	16977861	16977862	chunk0117_67_1	15.3744	AR_DHT_Control	chr22	16974710	16981169	-33837299	+	L1PA7	LINE	L1	1	6469	0	2
chr22	17063513	17063514	chunk0117_69_1	36.0823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	17063277	17063658	-33754810	+	L1M5	LINE	L1	5311	5709	-470	2
chr22	17073759	17073760	chunk0117_71_1	45.7366	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	17072866	17074357	-33744111	-	L1M3f	LINE	L1	-3742	3820	2350	2
chr22	17081453	17081454	chunk0117_73_1	29.0029	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	17081265	17081593	-33736875	+	MER58B	DNA	hAT-Charlie	7	338	-3	2
chr22	17141802	17141803	chunk0117_77_1	20.1808	AR_DHT_Control	chr22	17141617	17141845	-33676623	+	MIRb	SINE	MIR	1	245	-23	2
chr22	17242954	17242955	chunk0117_86_1	26.19432	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	17242922	17242987	-33575481	-	MIRb	SINE	MIR	-14	254	186	2
chr22	17298942	17298943	chunk0117_88_1	42.5859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	17296834	17299769	-33518699	-	L1PA6	LINE	L1	-3213	3106	179	2
chr22	17318621	17318622	chunk0117_90_1	6.93299	AR_DHT_Control	chr22	17318593	17318711	-33499757	-	L2c	LINE	L2	-1	3386	3279	2
chr22	17349445	17349446	chunk0117_91_1	15.6173	AR_DHT_Control	chr22	17349308	17349596	-33468872	+	L2c	LINE	L2	3074	3372	-15	2
chr22	17601315	17601316	chunk0117_98_1	8.27376	AR_DHT_Control	chr22	17601295	17601421	-33217047	-	L2c	LINE	L2	-5	3382	3258	2
chr22	17891934	17891935	chunk0117_106_1	6.10159	AR_DHT_Control	chr22	17891926	17891989	-32926479	-	AmnSINE1	SINE	5S-Deu-L2	-417	158	95	2
chr22	17924961	17924962	chunk0117_107_1	7.38866	AR_DHT_Control	chr22	17924924	17924964	-32893504	+	MSTB	LTR	ERVL-MaLR	387	426	0	2
chr22	18147223	18147224	chunk0117_118_1	57.5263	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	18147088	18147432	-32671036	-	L1MC4	LINE	L1	-1035	7007	6657	2
chr22	18891045	18891046	chunk0117_120_1	116.3964	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	18890644	18891207	-31927261	-	HSATI	Satellite	Satellite	-10	567	4	2
chr22	18892493	18892494	chunk0117_121_1	42.0752	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr22	18892362	18892653	-31925815	-	AluSc8	SINE	Alu	-23	288	13	2
chr22	19045489	19045490	chunk0117_123_1	14.5125	AR_DHT_Control	chr22	19045372	19045597	-31772871	-	L1MD	LINE	L1	-1288	4858	4652	2
chr22	19178963	19178964	chunk0117_129_1	12.60448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	19178947	19178984	-31639484	+	G-rich	Low_complexity	Low_complexity	1	40	0	2
chr22	19237641	19237642	chunk0117_131_1	36.92919	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	19237522	19237742	-31580726	+	L1ME4b	LINE	L1	5618	5821	-303	2
chr22	19390826	19390827	chunk0117_135_1	40.32774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	19390750	19391000	-31427468	-	L1ME2	LINE	L1	-477	5685	5449	2
chr22	19441066	19441067	chunk0117_139_1	6.48643	AR_DHT_Control	chr22	19440891	19441380	-31377088	-	L1MD2	LINE	L1	-10	6349	5825	2
chr22	19535191	19535192	chunk0117_141_1	12.1886	AR_DHT_Control	chr22	19535016	19535467	-31283001	+	L1MA5A	LINE	L1	5472	5899	-398	2
chr22	19563249	19563250	chunk0117_144_1	49.621	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	19563018	19563360	-31255108	-	L1ME1	LINE	L1	-18	6161	5736	2
chr22	19681631	19681632	chunk0117_148_1	36.3736	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	19681383	19682759	-31135709	+	L1MDa	LINE	L1	1012	2390	-4243	2
chr22	19690493	19690494	chunk0117_149_1	10.1096	AR_DHT_Control	chr22	19690430	19690552	-31127916	-	L1MC4	LINE	L1	-1110	6932	6809	2
chr22	20217114	20217115	chunk0117_163_1	6.97394	AR_DHT_Control	chr22	20216815	20217140	-30601328	+	Tigger3a	DNA	TcMar-Tigger	1	345	-3	2
chr22	20701165	20701166	chunk0117_174_1	9.21264	AR_DHT_Control	chr22	20701094	20701324	-30117144	-	L1MC	LINE	L1	-2197	3949	3703	2
chr22	20777824	20777825	chunk0117_177_1	15.22096	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	20777756	20777841	-30040627	+	Tigger15a	DNA	TcMar-Tigger	39	117	-598	2
chr22	21616008	21616009	chunk0117_193_1	5.32898	AR_DHT_Control	chr22	21615634	21616227	-29202241	+	Tigger17a	DNA	TcMar-Tigger	2	641	-13	2
chr22	21629317	21629318	chunk0117_194_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	21629313	21629345	-29189123	+	(GCACGT)n	Simple_repeat	Simple_repeat	1	32	0	2
chr22	21707913	21707914	chunk0117_197_1	262.65204	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr22	21707781	21707958	-29110510	-	MER58A	DNA	hAT-Charlie	-2	222	6	2
chr22	21842801	21842802	chunk0117_202_1	22.443	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	21842614	21842838	-28975630	+	L1ME4a	LINE	L1	5826	6092	-32	2
chr22	21853493	21853494	chunk0117_206_1	91.0104	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	21853354	21853686	-28964782	+	L1MD	LINE	L1	3579	3928	-2218	2
chr22	21867683	21867684	chunk0117_208_1	9.22937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	21867647	21867707	-28950761	+	G-rich	Low_complexity	Low_complexity	1	61	0	2
chr22	22010863	22010864	chunk0117_210_1	5.6425	AR_DHT_Control	chr22	22010809	22010916	-28807552	-	MER81	DNA	hAT-Blackjack	-1	113	5	2
chr22	22095607	22095608	chunk0117_214_1	58.3554	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	22095156	22096680	-28721788	+	L1PA16	LINE	L1	4614	6157	-9	2
chr22	22224948	22224949	chunk0117_215_1	8.27376	AR_DHT_Control	chr22	22224580	22225054	-28593414	-	ERV3-16A3_I-int	LTR	ERVL	-1979	3247	2783	2
chr22	22861592	22861593	chunk0117_231_1	4.19326	AR_DHT_Control	chr22	22860766	22862551	-27955917	+	L1MA4A	LINE	L1	4541	6296	-7	2
chr22	23004279	23004280	chunk0117_237_1	31.8719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	23003348	23005435	-27813033	+	L1MA5	LINE	L1	4265	6300	0	2
chr22	23080370	23080371	chunk0117_238_1	7.51711	AR_DHT_Control	chr22	23080358	23080387	-27738081	+	(TCATC)n	Simple_repeat	Simple_repeat	1	29	0	2
chr22	23147855	23147856	chunk0117_243_1	81.95129	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	23147632	23148085	-27670383	+	L1ME4b	LINE	L1	377	853	-39	2
chr22	23279071	23279072	chunk0117_249_1	5.40567	AR_DHT_Control	chr22	23278930	23279157	-27539311	+	MIRb	SINE	MIR	31	260	-8	2
chr22	23365805	23365806	chunk0117_251_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	23365562	23365821	-27452647	+	L2a	LINE	L2	3116	3425	-1	2
chr22	23390478	23390479	chunk0117_252_1	11.8854	AR_DHT_Control	chr22	23390396	23390615	-27427853	+	HAL1	LINE	L1	852	1103	-1404	2
chr22	23499784	23499785	chunk0117_257_1	14.086	AR_DHT_Control	chr22	23499750	23499842	-27318626	+	(CACACG)n	Simple_repeat	Simple_repeat	1	93	0	2
chr22	23536277	23536278	chunk0117_260_1	22.7766	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	23536061	23537026	-27281442	+	LTR5_Hs	LTR	ERVK	1	964	-4	2
chr22	23547968	23547969	chunk0117_261_1	11.7184	AR_DHT_Control	chr22	23547937	23548428	-27270040	+	LTR5B	LTR	ERVK	477	1002	0	2
chr22	23938999	23939000	chunk0117_267_1	443.0662	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	23938694	23939107	-26879361	-	MER34-int	LTR	ERV1	0	8207	7786	2
chr22	24044829	24044830	chunk0117_271_1	35.6971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	24044306	24044925	-26773543	-	MLT1A-int	LTR	ERVL-MaLR	-487	884	164	2
chr22	24195822	24195823	chunk0117_277_1	15.6173	AR_DHT_Control	chr22	24195749	24196046	-26622422	-	LTR48B	LTR	ERV1	-308	336	1	2
chr22	24208216	24208217	chunk0117_278_1	120.0616	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	24208182	24208358	-26610110	-	L1ME4b	LINE	L1	-698	194	45	2
chr22	24300434	24300435	chunk0117_284_1	12.337	AR_DHT_Control	chr22	24300007	24300733	-26517735	-	L1PA8A	LINE	L1	0	6131	5395	2
chr22	24530125	24530126	chunk0117_300_1	27.6463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	24529997	24530356	-26288112	+	L1M4	LINE	L1	3040	3406	-2740	2
chr22	24532241	24532242	chunk0117_303_1	20.78583	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	24532100	24532492	-26285976	-	MER89-int	LTR	ERV1	-316	6485	6082	2
chr22	24572149	24572150	chunk0117_308_1	35.1184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	24572126	24572154	-26246314	+	(TTTTG)n	Simple_repeat	Simple_repeat	1	28	0	2
chr22	24579061	24579062	chunk0117_309_1	31.07989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	24578646	24579196	-26239272	-	MER74B	LTR	ERVL	0	622	50	2
chr22	24630539	24630540	chunk0117_312_1	10.1791	AR_DHT_Control	chr22	24630445	24631411	-26187057	-	LTR5_Hs	LTR	ERVK	0	968	1	2
chr22	24727406	24727407	chunk0117_313_1	8.62865	AR_DHT_Control	chr22	24727317	24727481	-26090987	+	MLT1E2	LTR	ERVL-MaLR	159	352	-275	2
chr22	24802321	24802322	chunk0117_314_1	7.53305	AR_DHT_Control	chr22	24801862	24802391	-26016077	-	MLT2B4	LTR	ERVL	0	520	1	2
chr22	24808977	24808978	chunk0117_316_1	8.43053	AR_DHT_Control	chr22	24808973	24809101	-26009367	-	MIRb	SINE	MIR	-102	166	24	2
chr22	24841457	24841458	chunk0117_318_1	45.1522	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	24841148	24841537	-25976931	-	L1MB2	LINE	L1	-3185	2955	2570	2
chr22	24894627	24894628	chunk0117_319_1	26.47176	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	24894423	24894838	-25923630	-	MLT1H	LTR	ERVL-MaLR	-2	547	65	2
chr22	24935074	24935075	chunk0117_323_1	55.6102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	24935057	24935268	-25883200	-	MIRb	SINE	MIR	0	268	60	2
chr22	25139959	25139960	chunk0117_335_1	6.64592	AR_DHT_Control	chr22	25139531	25139960	-25678508	-	L2a	LINE	L2	0	3426	2953	2
chr22	25601990	25601991	chunk0118_10_1	12.1004	AR_DHT_Control	chr22	25601595	25602918	-25215550	+	L1ME2	LINE	L1	4755	6116	-48	2
chr22	25636549	25636550	chunk0118_14_1	41.9192	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	25635206	25636576	-25181892	-	L1MC4	LINE	L1	-74	7968	6351	2
chr22	26445569	26445570	chunk0118_25_1	7.16019	AR_DHT_Control	chr22	26445506	26445655	-24372813	+	MIRb	SINE	MIR	1	143	-125	2
chr22	26568758	26568759	chunk0118_27_1	9.06816	AR_DHT_Control	chr22	26568313	26568861	-24249607	+	MER41B	LTR	ERV1	1	557	-77	2
chr22	26703425	26703426	chunk0118_28_1	9.50609	AR_DHT_Control	chr22	26703338	26703591	-24114877	+	L1MD3	LINE	L1	7621	7981	-14	2
chr22	26742298	26742299	chunk0118_30_1	29.00899	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	26741888	26742307	-24076161	+	L2c	LINE	L2	2927	3387	0	2
chr22	27122109	27122110	chunk0118_33_1	5.6425	AR_DHT_Control	chr22	27121217	27122170	-23696298	+	L2a	LINE	L2	2274	3331	-95	2
chr22	27373919	27373920	chunk0118_34_1	7.87682	AR_DHT_Control	chr22	27373052	27375745	-23442723	+	L1P2	LINE	L1	1	2710	-3436	2
chr22	27457139	27457140	chunk0118_36_1	25.8665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	27456769	27457155	-23361313	+	L2c	LINE	L2	2863	3272	-115	2
chr22	27516622	27516623	chunk0118_37_1	8.95279	AR_DHT_Control	chr22	27516578	27516737	-23301731	+	L2	LINE	L2	2603	2742	-677	2
chr22	27687105	27687106	chunk0118_38_1	17.86532	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	27687100	27687172	-23131296	+	MamRep434	DNA	TcMar-Tigger	99	172	-254	2
chr22	27765096	27765097	chunk0118_41_1	121.7206	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	27765090	27765161	-23053307	+	MER58C	DNA	hAT-Charlie	148	215	0	2
chr22	27805851	27805852	chunk0118_43_1	5.25527	AR_DHT_Control	chr22	27805842	27805871	-23012597	+	(CA)n	Simple_repeat	Simple_repeat	1	29	0	2
chr22	27902212	27902213	chunk0118_50_1	6.84874	AR_DHT_Control	chr22	27901938	27902521	-22915947	-	L2c	LINE	L2	0	3387	2747	2
chr22	27913153	27913154	chunk0118_51_1	4.84918	AR_DHT_Control	chr22	27913003	27913193	-22905275	+	L3	LINE	CR1	3221	3406	-693	2
chr22	27920850	27920851	chunk0118_53_1	17.6381	AR_DHT_Control	chr22	27920715	27920940	-22897528	-	MIRb	SINE	MIR	-16	252	14	2
chr22	27936077	27936078	chunk0118_56_1	175.3623	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	27935792	27936648	-22881820	+	Tigger2b_Pri	DNA	TcMar-Tigger	113	1067	-1	2
chr22	27965569	27965570	chunk0118_59_1	4.67225	AR_DHT_Control	chr22	27965534	27965830	-22852638	-	L1ME3C	LINE	L1	-230	5893	5545	2
chr22	28322449	28322450	chunk0118_61_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	28322284	28322491	-22495977	-	Tigger15a	DNA	TcMar-Tigger	-42	673	470	2
chr22	28640805	28640806	chunk0118_69_1	46.64687	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	28640739	28641043	-22177425	+	L1MB7	LINE	L1	5515	5832	-352	2
chr22	28904610	28904611	chunk0118_79_1	102.9593	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	28904587	28904618	-21913850	+	(CT)n	Simple_repeat	Simple_repeat	1	32	0	2
chr22	28967287	28967288	chunk0118_81_1	10.2986	AR_DHT_Control	chr22	28967181	28967456	-21851012	+	Tigger3	DNA	TcMar-Tigger	2699	3028	-1	2
chr22	29321541	29321542	chunk0118_107_1	29.9216	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	29321409	29321908	-21496560	+	L1MC3	LINE	L1	6728	7197	-588	2
chr22	29335159	29335160	chunk0118_109_1	20.20409	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	29334946	29335184	-21483284	+	L2b	LINE	L2	3081	3370	-5	2
chr22	29361739	29361740	chunk0118_114_1	12.375	AR_DHT_Control	chr22	29361589	29361773	-21456695	-	L2c	LINE	L2	-43	3344	3150	2
chr22	29563779	29563780	chunk0118_124_1	133.8011	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	29563577	29564029	-21254439	+	MLT1C	LTR	ERVL-MaLR	6	464	-3	2
chr22	29766333	29766334	chunk0118_129_1	6.73207	AR_DHT_Control	chr22	29766164	29766544	-21051924	+	L2b	LINE	L2	2890	3368	-7	2
chr22	29856779	29856780	chunk0118_136_1	36.94018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	29856456	29856890	-20961578	+	L2b	LINE	L2	2932	3383	-4	2
chr22	29935278	29935279	chunk0118_144_1	264.973	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	29935217	29935419	-20883049	-	MIRb	SINE	MIR	-5	263	36	2
chr22	29941514	29941515	chunk0118_145_1	46.4842	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	29940989	29941657	-20876811	-	L1ME2	LINE	L1	-81	6083	5403	2
chr22	29961754	29961755	chunk0118_147_1	4.29711	AR_DHT_Control	chr22	29961510	29962105	-20856363	+	Tigger3c	DNA	TcMar-Tigger	1	602	0	2
chr22	30310649	30310650	chunk0118_156_1	9.18172	AR_DHT_Control	chr22	30310624	30310811	-20507657	-	MIRb	SINE	MIR	-6	262	55	2
chr22	30417116	30417117	chunk0118_161_1	260.8889	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	30416936	30417200	-20401268	+	L1ME4a	LINE	L1	5614	5799	-325	2
chr22	30747039	30747040	chunk0118_167_1	32.86665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	30746791	30747160	-20071308	+	L1M4	LINE	L1	3622	3977	-2169	2
chr22	30767401	30767402	chunk0118_173_1	11.5247	AR_DHT_Control	chr22	30767335	30767603	-20050865	-	L1MC5	LINE	L1	-31	9273	9016	2
chr22	30782643	30782644	chunk0118_174_1	38.5789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	30782486	30782886	-20035582	-	L1ME2	LINE	L1	-220	5944	5532	2
chr22	31260270	31260271	chunk0118_188_1	11.0019	AR_DHT_Control	chr22	31260197	31260513	-19557955	+	L2a	LINE	L2	3002	3426	0	2
chr22	31586340	31586341	chunk0118_200_1	38.41362	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	31586018	31586427	-19232041	+	L2c	LINE	L2	2872	3384	-3	2
chr22	31894477	31894478	chunk0118_216_1	18.59329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	31894416	31894493	-18923975	-	L1ME4b	LINE	L1	-318	574	492	2
chr22	31921114	31921115	chunk0118_217_1	19.0466	AR_DHT_Control	chr22	31921066	31921609	-18896859	+	L2a	LINE	L2	2811	3425	-1	2
chr22	32112648	32112649	chunk0118_220_1	43.07569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	32112635	32113008	-18705460	+	L1MA8	LINE	L1	5893	6288	-3	2
chr22	32128430	32128431	chunk0118_221_1	14.9999	AR_DHT_Control	chr22	32128402	32128557	-18689911	-	MIRb	SINE	MIR	-58	210	60	2
chr22	32153255	32153256	chunk0118_226_1	34.7673	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	32153138	32153645	-18664823	+	L1MC	LINE	L1	3036	3571	-2575	2
chr22	32221635	32221636	chunk0118_227_1	21.20145	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	32221382	32221659	-18596809	-	HAL1ME	LINE	L1	-148	2317	2022	2
chr22	32680373	32680374	chunk0118_242_1	6.02617	AR_DHT_Control	chr22	32680239	32680469	-18137999	+	L2c	LINE	L2	3122	3345	-42	2
chr22	32685103	32685104	chunk0118_243_1	6.8205	AR_DHT_Control	chr22	32684947	32685191	-18133277	+	MER58A	DNA	hAT-Charlie	2	224	0	2
chr22	32780681	32780682	chunk0118_247_1	5.56714	AR_DHT_Control	chr22	32780635	32780886	-18037582	+	MIR	SINE	MIR	15	262	0	2
chr22	32791229	32791230	chunk0118_248_1	7.69414	AR_DHT_Control	chr22	32791039	32791237	-18027231	+	MIR	SINE	MIR	65	262	0	2
chr22	32886049	32886050	chunk0118_250_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	32886049	32886214	-17932254	+	Helitron1Na_Mam	RC	Helitron	848	1034	-28	2
chr22	33037087	33037088	chunk0118_254_1	15.46094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	33036990	33037192	-17781276	+	MER34A1	LTR	ERV1	396	581	-6	2
chr22	33070386	33070387	chunk0118_257_1	5.12066	AR_DHT_Control	chr22	33070332	33070569	-17747899	+	MER20	DNA	hAT-Charlie	1	219	0	2
chr22	33094716	33094717	chunk0118_259_1	23.24699	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	33094706	33095018	-17723450	-	AluSp	SINE	Alu	-1	312	1	2
chr22	33246801	33246802	chunk0118_261_1	37.2002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	33246658	33246924	-17571544	+	Charlie25	DNA	hAT-Charlie	1053	1314	-1210	2
chr22	33293128	33293129	chunk0118_263_1	24.1373	AR_DHT_Control	chr22	33293023	33293207	-17525261	-	L2b	LINE	L2	-153	3222	3000	2
chr22	33338691	33338692	chunk0118_266_1	7.18179	AR_DHT_Control	chr22	33338610	33338707	-17479761	+	MIR	SINE	MIR	159	256	-6	2
chr22	33672890	33672891	chunk0118_276_1	10.7367	AR_DHT_Control	chr22	33672785	33672931	-17145537	-	L2b	LINE	L2	-7	3368	3221	2
chr22	33804032	33804033	chunk0118_279_1	162.3186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	33803505	33804035	-17014433	-	MER68	LTR	ERVL	-28	535	2	2
chr22	33886847	33886848	chunk0118_288_1	149.1897	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	33886767	33887121	-16931347	-	L2b	LINE	L2	-2	3373	3043	2
chr22	34037469	34037470	chunk0118_290_1	10.2385	AR_DHT_Control	chr22	34037400	34037516	-16780952	-	Tigger19a	DNA	TcMar-Tigger	-117	206	88	2
chr22	34236782	34236783	chunk0118_293_1	5.77762	AR_DHT_Control	chr22	34236779	34236849	-16581619	-	MLT1H2	LTR	ERVL-MaLR	-258	291	217	2
chr22	34282377	34282378	chunk0118_294_1	19.60814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	34281959	34282493	-16535975	+	L2b	LINE	L2	2292	2885	-534	2
chr22	34411257	34411258	chunk0118_297_1	10.74076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	34411109	34411573	-16406895	+	L1MC4a	LINE	L1	6306	6796	-1086	2
chr22	35034037	35034038	chunk0118_304_1	6.23615	AR_DHT_Control	chr22	35033944	35034101	-15784367	+	MIR	SINE	MIR	67	228	-34	2
chr22	35051061	35051062	chunk0118_305_1	6.56183	AR_DHT_Control	chr22	35050567	35051602	-15766866	-	L4_A_Mam	LINE	RTE-X	-904	4086	3015	2
chr22	35071033	35071034	chunk0118_309_1	79.51	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	35070825	35071034	-15747434	-	MER58A	DNA	hAT-Charlie	0	224	13	2
chr22	35191625	35191626	chunk0118_315_1	304.8303	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	35191504	35191795	-15626673	+	MER68	LTR	ERVL	6	315	-248	2
chr22	35266441	35266442	chunk0118_321_1	82.77983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	35266399	35266516	-15551952	-	L2b	LINE	L2	-24	3351	3236	2
chr22	35392469	35392470	chunk0118_327_1	35.9054	AR_DHT_Control	chr22	35392456	35392478	-15425990	+	(TGCT)n	Simple_repeat	Simple_repeat	1	22	0	2
chr22	35588278	35588279	chunk0118_336_1	11.2437	AR_DHT_Control	chr22	35588268	35588439	-15230029	-	MIRb	SINE	MIR	-78	190	15	2
chr22	35589999	35590000	chunk0118_337_1	101.1346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	35589944	35590209	-15228259	-	L1MB8	LINE	L1	-1867	6128	5860	2
chr22	35655269	35655270	chunk0118_341_1	43.9707	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	35654753	35655315	-15163153	+	MER34B	LTR	ERV1	1	565	0	2
chr22	35882392	35882393	chunk0118_344_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	35882078	35882791	-14935677	-	L2a	LINE	L2	-1095	2324	1512	2
chr22	35949527	35949528	chunk0118_348_1	11.0326	AR_DHT_Control	chr22	35949248	35950116	-14868352	-	L1MB3	LINE	L1	-391	5792	4942	2
chr22	36143338	36143339	chunk0118_350_1	6.7814	AR_DHT_Control	chr22	36143195	36143483	-14674985	+	MER77B	LTR	ERVL	337	650	-50	2
chr22	36151571	36151572	chunk0118_351_1	18.84899	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36151256	36151596	-14666872	+	HAL1	LINE	L1	872	1230	-1235	2
chr22	36269085	36269086	chunk0118_355_1	53.4151	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36269076	36269734	-14548734	-	L1P3	LINE	L1	-3157	3304	2632	2
chr22	36370257	36370258	chunk0118_361_1	19.884	AR_DHT_Control	chr22	36370088	36370258	-14448210	-	MIR	SINE	MIR	-73	189	16	2
chr22	36386297	36386298	chunk0118_362_1	27.10313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36386245	36386322	-14432146	+	L2a	LINE	L2	3341	3418	-8	2
chr22	36445408	36445409	chunk0118_369_1	44.33825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	36445351	36445521	-14372947	+	MER117	DNA	hAT-Charlie	1	161	-36	2
chr22	36453369	36453370	chunk0118_371_1	7.63982	AR_DHT_Control	chr22	36453366	36453444	-14365024	-	L2b	LINE	L2	-361	3014	2934	2
chr22	36615712	36615713	chunk0118_376_1	24.693	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36615333	36615773	-14202695	+	L2a	LINE	L2	2899	3417	-9	2
chr22	36622069	36622070	chunk0118_379_1	13.45379	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36621972	36622186	-14196282	-	MIR	SINE	MIR	-11	251	36	2
chr22	36840548	36840549	chunk0118_383_1	52.38508	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	36840526	36840989	-13977479	+	L1ME4b	LINE	L1	11	360	-532	2
chr22	37019628	37019629	chunk0118_385_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	37019626	37019672	-13798796	+	G-rich	Low_complexity	Low_complexity	1	46	0	2
chr22	37147327	37147328	chunk0118_386_1	10.8241	AR_DHT_Control	chr22	37147137	37147353	-13671115	-	MIR	SINE	MIR	-7	255	24	2
chr22	37196999	37197000	chunk0118_388_1	23.04381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	37196913	37197109	-13621359	-	MIR3	SINE	MIR	0	208	15	2
chr22	37321475	37321476	chunk0118_389_1	7.57442	AR_DHT_Control	chr22	37321405	37321749	-13496719	+	L1PA15	LINE	L1	5814	6161	-4	2
chr22	37529755	37529756	chunk0118_390_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	37529627	37529785	-13288683	-	MIR	SINE	MIR	-114	148	2	2
chr22	37664479	37664480	chunk0118_391_1	8.46929	AR_DHT_Control	chr22	37664452	37664593	-13153875	+	MIRb	SINE	MIR	4	151	-117	2
chr22	37777391	37777392	chunk0118_393_1	28.638	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	37777362	37777538	-13040930	+	MIRb	SINE	MIR	16	193	-75	2
chr22	37784944	37784945	chunk0118_395_1	11.0699	AR_DHT_Control	chr22	37784933	37785205	-13033263	-	L2b	LINE	L2	-41	3334	3031	2
chr22	38062975	38062976	chunk0118_408_1	107.4194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	38062611	38063124	-12755344	-	HAL1	LINE	L1	-738	1769	1245	2
chr22	38168147	38168148	chunk0118_411_1	11.42721	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	38167963	38168270	-12650198	+	L2b	LINE	L2	3055	3373	-2	2
chr22	38178208	38178209	chunk0118_412_1	63.10399	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	38178204	38178288	-12640180	-	L2a	LINE	L2	-4	3422	3337	2
chr22	38187596	38187597	chunk0118_414_1	5.29288	AR_DHT_Control	chr22	38187505	38187699	-12630769	+	MER58A	DNA	hAT-Charlie	24	224	0	2
chr22	38202653	38202654	chunk0118_415_1	6.17841	AR_DHT_Control	chr22	38202653	38202725	-12615743	+	(GT)n	Simple_repeat	Simple_repeat	1	70	0	2
chr22	38319467	38319468	chunk0118_416_1	38.15848	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	38319405	38319550	-12498918	-	MIRb	SINE	MIR	-13	255	91	2
chr22	38375915	38375916	chunk0118_418_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	38375711	38376316	-12442152	-	Tigger1	DNA	TcMar-Tigger	-1236	1182	583	2
chr22	38706977	38706978	chunk0118_435_1	7.51711	AR_DHT_Control	chr22	38706961	38707166	-12111302	+	MIR	SINE	MIR	20	252	-10	2
chr22	38896873	38896874	chunk0118_437_1	7.36432	AR_DHT_Control	chr22	38896297	38897145	-11921323	-	L1MC5a	LINE	L1	-63	2714	1811	2
chr22	38924633	38924634	chunk0118_438_1	7.92366	AR_DHT_Control	chr22	38924291	38925466	-11893002	-	Charlie25	DNA	hAT-Charlie	-987	1537	299	2
chr22	39020084	39020085	chunk0118_441_1	10.7301	AR_DHT_Control	chr22	39019796	39020094	-11798374	-	AluSq2	SINE	Alu	-4	309	2	2
chr22	39161043	39161044	chunk0118_445_1	38.3066	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	39160986	39161400	-11657068	+	L1MEd	LINE	L1	4734	5182	-964	2
chr22	39255986	39255987	chunk0118_447_1	6.93824	AR_DHT_Control	chr22	39255940	39256054	-11562414	-	MIR3	SINE	MIR	-26	182	54	2
chr22	39411673	39411674	chunk0118_449_1	51.3254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	39410700	39412028	-11406440	+	L1ME1	LINE	L1	4489	5924	-255	2
chr22	39879772	39879773	chunk0118_462_1	69.7286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	39879489	39879945	-10938523	+	L1MC1	LINE	L1	5894	6352	-508	2
chr22	39996400	39996401	chunk0119_5_1	17.7315	AR_DHT_Control	chr22	39996330	39996516	-10821952	-	MER53	DNA	hAT	-8	185	1	2
chr22	40048693	40048694	chunk0119_10_1	69.8316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40048651	40048786	-10769682	-	L1ME1	LINE	L1	-25	6154	6010	2
chr22	40053651	40053652	chunk0119_11_1	29.22498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40053563	40053729	-10764739	+	L2c	LINE	L2	3229	3385	-2	2
chr22	40060791	40060792	chunk0119_12_1	8.41215	AR_DHT_Control	chr22	40060554	40061097	-10757371	-	MER68	LTR	ERVL	0	563	1	2
chr22	40137367	40137368	chunk0119_15_1	5.66005	AR_DHT_Control	chr22	40137291	40137374	-10681094	-	MIRb	SINE	MIR	-156	112	32	2
chr22	40199425	40199426	chunk0119_21_1	41.7543	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	40199271	40199786	-10618682	+	L1MC4	LINE	L1	7270	7807	-235	2
chr22	40437879	40437880	chunk0119_35_1	17.8083	AR_DHT_Control	chr22	40437778	40437960	-10380508	+	L2a	LINE	L2	3268	3426	0	2
chr22	40510756	40510757	chunk0119_37_1	4.84918	AR_DHT_Control	chr22	40510584	40510843	-10307625	-	L2c	LINE	L2	-6	3381	3108	2
chr22	40542749	40542750	chunk0119_40_1	29.7116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40542574	40542960	-10275508	+	L1ME4a	LINE	L1	5605	6063	-61	2
chr22	40678474	40678475	chunk0119_44_1	16.80903	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40678115	40678541	-10139927	+	L2a	LINE	L2	3001	3421	-5	2
chr22	40711727	40711728	chunk0119_47_1	44.6186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40711686	40711870	-10106598	+	LTR81A	LTR	Gypsy	933	1153	0	2
chr22	40751381	40751382	chunk0119_51_1	5.6425	AR_DHT_Control	chr22	40751210	40751559	-10066909	+	Tigger15a	DNA	TcMar-Tigger	31	429	-286	2
chr22	40757543	40757544	chunk0119_52_1	16.22155	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	40757467	40757565	-10060903	-	L2c	LINE	L2	-92	3295	3198	2
chr22	40758599	40758600	chunk0119_54_1	19.70339	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	40758479	40758712	-10059756	+	MIRc	SINE	MIR	3	248	-20	2
chr22	40803502	40803503	chunk0119_55_1	5.73469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	40803261	40803827	-10014641	-	L1MA6	LINE	L1	-251	6049	5476	2
chr22	40966124	40966125	chunk0119_62_1	14.33632	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	40965971	40966218	-9852250	+	MIRc	SINE	MIR	1	244	-24	2
chr22	41045063	41045064	chunk0119_65_1	9.14794	AR_DHT_Control	chr22	41045013	41045495	-9772973	+	L1ME4b	LINE	L1	184	692	-200	2
chr22	41106655	41106656	chunk0119_67_1	7.36432	AR_DHT_Control	chr22	41106628	41106882	-9711586	-	AluJr	SINE	Alu	-13	299	11	2
chr22	41190715	41190716	chunk0119_68_1	24.96214	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	41190501	41190868	-9627600	+	L1ME2	LINE	L1	5581	5977	-187	2
chr22	41201652	41201653	chunk0119_70_1	6.6833	AR_DHT_Control	chr22	41201539	41201746	-9616722	+	L2	LINE	L2	1648	1866	-1553	2
chr22	41638325	41638326	chunk0119_87_1	25.6452	AR_DHT_Control	chr22	41638239	41638502	-9179966	-	Tigger3c	DNA	TcMar-Tigger	0	602	327	2
chr22	41687790	41687791	chunk0119_90_1	25.83169	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	41687707	41687834	-9130634	-	MIRb	SINE	MIR	-18	250	121	2
chr22	41940144	41940145	chunk0119_97_1	9.9328	AR_DHT_Control	chr22	41939903	41940386	-8878082	+	L2a	LINE	L2	2724	3317	-109	2
chr22	41947955	41947956	chunk0119_98_1	5.03783	AR_DHT_Control	chr22	41947934	41948124	-8870344	-	LTR40c	LTR	ERVL	-262	203	1	2
chr22	42050935	42050936	chunk0119_100_1	103.0584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	42050660	42051669	-8766799	+	L1MC2	LINE	L1	5300	6318	-26	2
chr22	42159100	42159101	chunk0119_103_1	8.91027	AR_DHT_Control	chr22	42158895	42159111	-8659357	+	L1MC1	LINE	L1	6068	6316	-17	2
chr22	42229475	42229476	chunk0119_106_1	35.10237	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	42229438	42229520	-8588948	-	L2c	LINE	L2	-21	3366	3289	2
chr22	42260222	42260223	chunk0119_110_1	12.1057	AR_DHT_Control	chr22	42259956	42260504	-8557964	-	L2a	LINE	L2	-142	3284	2697	2
chr22	42261235	42261236	chunk0119_111_1	21.55147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	42260955	42261464	-8557004	-	L1ME2	LINE	L1	-100	6064	5515	2
chr22	42659033	42659034	chunk0119_120_1	72.1475	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	42658936	42659282	-8159186	-	L1M4	LINE	L1	-387	5797	5430	2
chr22	42682301	42682302	chunk0119_121_1	10.7282	AR_DHT_Control	chr22	42682223	42682407	-8136061	+	ERVL-E-int	LTR	ERVL	5420	5600	-67	2
chr22	42940356	42940357	chunk0119_135_1	8.8674	AR_DHT_Control	chr22	42940340	42940404	-7878064	+	L2c	LINE	L2	3320	3385	-2	2
chr22	42944582	42944583	chunk0119_137_1	33.569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	42944393	42944657	-7873811	+	L1ME4c	LINE	L1	207	489	-341	2
chr22	42978451	42978452	chunk0119_143_1	32.00279	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	42978448	42978531	-7839937	-	MIRb	SINE	MIR	-165	103	20	2
chr22	43115112	43115113	chunk0119_154_1	13.16057	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	43115051	43115376	-7703092	-	L2c	LINE	L2	-76	3311	2982	2
chr22	43130554	43130555	chunk0119_156_1	7.87199	AR_DHT_Control	chr22	43130417	43130577	-7687891	-	FLAM_A	SINE	Alu	0	142	1	2
chr22	43151006	43151007	chunk0119_158_1	10.3813	AR_DHT_Control	chr22	43150930	43151073	-7667395	-	MIRb	SINE	MIR	-27	241	93	2
chr22	43295480	43295481	chunk0119_166_1	55.7517	AR_DHT_Control	chr22	43295459	43295517	-7522951	-	L3	LINE	CR1	-108	3991	3935	2
chr22	43354677	43354678	chunk0119_169_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	43354454	43354695	-7463773	-	L1MB4	LINE	L1	-360	5820	5588	2
chr22	43446281	43446282	chunk0119_175_1	20.70592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	43446262	43446396	-7372072	-	L2a	LINE	L2	-13	3413	3242	2
chr22	43956542	43956543	chunk0119_181_1	15.9321	AR_DHT_Control	chr22	43956507	43956964	-6861504	-	LTR26C	LTR	ERV1	0	539	65	2
chr22	43988069	43988070	chunk0119_182_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	43987994	43988128	-6830340	+	L1ME4a	LINE	L1	5975	6122	-2	2
chr22	44028468	44028469	chunk0119_184_1	4.27166	AR_DHT_Control	chr22	44027983	44028973	-6789495	-	L1MC1	LINE	L1	-18	6315	5331	2
chr22	44036317	44036318	chunk0119_185_1	28.7969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	44036284	44036627	-6781841	-	Tigger2b_Pri	DNA	TcMar-Tigger	-721	347	1	2
chr22	44234279	44234280	chunk0119_188_1	90.7041	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	44234103	44234359	-6584109	-	L1MEg	LINE	L1	-2802	3344	3094	2
chr22	44561488	44561489	chunk0119_190_1	8.35541	AR_DHT_Control	chr22	44560487	44561584	-6256884	+	L1MEc	LINE	L1	675	1866	-4534	2
chr22	44569336	44569337	chunk0119_191_1	7.22694	AR_DHT_Control	chr22	44568659	44569500	-6248968	+	L1ME2	LINE	L1	5313	6145	-19	2
chr22	44645215	44645216	chunk0119_194_1	389.1602	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr22	44645184	44645529	-6172939	+	LTR40b	LTR	ERVL	101	461	-1	2
chr22	44666780	44666781	chunk0119_197_1	93.3919	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	44666046	44666952	-6151516	+	L1MD1	LINE	L1	5300	6233	-9	2
chr22	44866581	44866582	chunk0119_207_1	21.77522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	44866580	44866799	-5951669	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr22	44903808	44903809	chunk0119_209_1	10.4378	AR_DHT_Control	chr22	44903781	44904506	-5913962	-	L1MEi	LINE	L1	-3834	2312	1475	2
chr22	44968891	44968892	chunk0119_212_1	78.5403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	44968877	44969016	-5849452	-	L1MC3	LINE	L1	-822	6963	6820	2
chr22	45017679	45017680	chunk0119_213_1	17.27214	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45017569	45017785	-5800683	-	L1MA10	LINE	L1	0	6334	6136	2
chr22	45105301	45105302	chunk0119_216_1	22.70105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	45105263	45105452	-5713016	+	L1MC4	LINE	L1	7330	7526	-516	2
chr22	45118727	45118728	chunk0119_217_1	240.3496	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45118341	45118806	-5699662	+	L1M4	LINE	L1	5184	5642	-536	2
chr22	45162045	45162046	chunk0119_220_1	10.9812	AR_DHT_Control	chr22	45162014	45162109	-5656359	+	MER41C	LTR	ERV1	185	274	-247	2
chr22	45238818	45238819	chunk0119_228_1	26.17454	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45238780	45238875	-5579593	+	MIRb	SINE	MIR	19	106	-162	2
chr22	45538511	45538512	chunk0119_236_1	22.05771	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45538455	45538565	-5279903	-	L1ME3G	LINE	L1	-246	678	556	2
chr22	45572616	45572617	chunk0119_237_1	20.1459	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45572153	45572944	-5245524	+	L1MC5	LINE	L1	8052	8857	-447	2
chr22	45692060	45692061	chunk0119_245_1	79.4639	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45691967	45692122	-5126346	+	MIRb	SINE	MIR	93	249	-19	2
chr22	45761365	45761366	chunk0119_248_1	9.83641	AR_DHT_Control	chr22	45761321	45761431	-5057037	+	L2b	LINE	L2	3282	3426	0	2
chr22	45785617	45785618	chunk0119_249_1	30.21123	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	45785516	45785727	-5032741	-	MIRb	SINE	MIR	-16	252	18	2
chr22	45894200	45894201	chunk0119_265_1	20.98509	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	45893492	45894643	-4923825	+	BLACKJACK	DNA	hAT-Blackjack	1263	2491	-478	2
chr22	46196574	46196575	chunk0119_291_1	57.65915	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	46196432	46196627	-4621841	+	L2a	LINE	L2	2962	3166	-260	2
chr22	46225829	46225830	chunk0119_293_1	4.19326	AR_DHT_Control	chr22	46225497	46226252	-4592216	+	(CA)n	Simple_repeat	Simple_repeat	1	756	0	2
chr22	46301166	46301167	chunk0119_295_1	7.17788	AR_DHT_Control	chr22	46300840	46301473	-4516995	-	L1ME4b	LINE	L1	-56	836	178	2
chr22	46335435	46335436	chunk0119_296_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46335152	46335459	-4483009	-	MER4B	LTR	ERV1	-263	347	2	2
chr22	46469868	46469869	chunk0119_300_1	9.1218	AR_DHT_Control	chr22	46469819	46469970	-4348498	+	L2a	LINE	L2	3265	3425	-1	2
chr22	46495253	46495254	chunk0119_302_1	48.85481	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46495187	46495553	-4322915	-	Tigger3b	DNA	TcMar-Tigger	-94	1137	774	2
chr22	46704954	46704955	chunk0119_314_1	19.80554	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46704864	46705088	-4113380	+	L1MC5	LINE	L1	6667	6876	-2428	2
chr22	46714682	46714683	chunk0119_317_1	43.5287	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	46714435	46715461	-4103007	+	L1ME3A	LINE	L1	3307	4365	-1781	2
chr22	46842671	46842672	chunk0119_327_1	4.19326	AR_DHT_Control	chr22	46842336	46842727	-3975741	-	L1ME2z	LINE	L1	0	6444	6015	2
chr22	46870090	46870091	chunk0119_330_1	77.6256	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46870047	46870267	-3948201	-	MIRc	SINE	MIR	-12	256	15	2
chr22	46987399	46987400	chunk0119_337_1	24.6402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	46987326	46987464	-3831004	-	L1ME2z	LINE	L1	-1841	4696	4553	2
chr22	47276277	47276278	chunk0119_350_1	9.15979	AR_DHT_Control	chr22	47276164	47276354	-3542114	+	MLT1K	LTR	ERVL-MaLR	400	585	-10	2
chr22	47333770	47333771	chunk0119_353_1	5.53391	AR_DHT_Control	chr22	47333586	47334101	-3484367	-	MLT1H	LTR	ERVL-MaLR	0	549	1	2
chr22	47337323	47337324	chunk0119_354_1	14.83942	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	47337074	47337501	-3480967	+	LTR33B	LTR	ERVL	29	502	-1	2
chr22	47461005	47461006	chunk0119_360_1	111.452	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr22	47460912	47461111	-3357357	+	MIRb	SINE	MIR	26	260	-8	2
chr22	47475086	47475087	chunk0119_364_1	111.94285	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	47473776	47475333	-3343135	+	L1MC3	LINE	L1	4653	6162	-1623	2
chr22	47631608	47631609	chunk0119_371_1	6.54035	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	47631336	47631805	-3186663	-	MLT2B1	LTR	ERVL	0	520	21	2
chr22	47647622	47647623	chunk0119_374_1	8.0668	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	47647335	47648099	-3170369	+	(CA)n	Simple_repeat	Simple_repeat	1	793	0	2
chr22	47689757	47689758	chunk0119_375_1	32.6807	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	47689599	47689829	-3128639	-	L1MB5	LINE	L1	-347	5827	5584	2
chr22	48138574	48138575	chunk0119_380_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	48138340	48138945	-2679523	+	L1ME4b	LINE	L1	75	655	-237	2
chr22	48395796	48395797	chunk0119_387_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	48395625	48395897	-2422571	-	L1ME4c	LINE	L1	-218	612	337	2
chr22	48878704	48878705	chunk0119_393_1	106.8379	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	48878551	48878827	-1939641	-	L1ME1	LINE	L1	-1121	5025	4740	2
chr22	48879781	48879782	chunk0119_394_1	36.0159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	48879205	48879788	-1938680	-	L1ME1	LINE	L1	-2909	3237	2651	2
chr22	48982545	48982546	chunk0119_398_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	48982443	48982565	-1835903	+	L2c	LINE	L2	3235	3349	-38	2
chr22	49390536	49390537	chunk0119_404_1	8.27376	AR_DHT_Control	chr22	49389350	49390907	-1427561	-	L1M4a2	LINE	L1	-2534	3612	1932	2
chr22	49403876	49403877	chunk0119_405_1	7.3267	AR_DHT_Control	chr22	49403864	49404162	-1414306	-	L2	LINE	L2	-1637	1782	1461	2
chr22	49901731	49901732	chunk0119_420_1	6.71885	SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	49901448	49902261	-916207	+	(GT)n	Simple_repeat	Simple_repeat	1	832	0	2
chr22	49931167	49931168	chunk0119_421_1	5.60066	AR_DHT_Control	chr22	49931028	49931425	-887043	-	ERV3-16A3_I-int	LTR	ERVL	-2611	2615	2193	2
chr22	49933392	49933393	chunk0119_422_1	6.9447	AR_DHT_Control	chr22	49933204	49933439	-885029	-	ERV3-16A3_I-int	LTR	ERVL	-3617	1609	1392	2
chr22	49973698	49973699	chunk0119_426_1	21.5229	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	49972791	49973865	-844603	+	(GT)n	Simple_repeat	Simple_repeat	1	1123	0	2
chr22	50007177	50007178	chunk0119_428_1	15.36999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	50006983	50007243	-811225	+	L1MEc	LINE	L1	4048	4321	-1998	2
chr22	50022829	50022830	chunk0119_431_1	40.15384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	50022745	50022939	-795529	+	L1MEd	LINE	L1	4149	4351	-1795	2
chr22	50040599	50040600	chunk0119_434_1	42.65676	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	50040371	50040682	-777786	+	L1ME3	LINE	L1	5843	6159	-3	2
chr22	50043009	50043010	chunk0119_435_1	42.5485	AR_DHT_Control	chr22	50042763	50043128	-775340	+	L1MC	LINE	L1	5424	5784	-549	2
chr22	50131399	50131400	chunk0119_439_1	24.2778	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr22	50131207	50131835	-686633	-	L1M5	LINE	L1	-781	5398	4762	2
chr22	50136969	50136970	chunk0119_442_1	58.1935	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	50136411	50137467	-681001	+	L1ME1	LINE	L1	51	1170	-5230	2
chr22	50213558	50213559	chunk0119_447_1	249.2268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr22	50213356	50213651	-604817	-	L1MB3	LINE	L1	-3300	3082	2819	2
chr22	50310402	50310403	chunk0119_449_1	5.24685	AR_DHT_Control	chr22	50310352	50310474	-507994	+	MIR	SINE	MIR	100	229	-33	2
chr22	50387594	50387595	chunk0119_451_1	6.17841	AR_DHT_Control	chr22	50387583	50387737	-430731	-	MER63B	DNA	hAT-Blackjack	0	436	280	2
chr22	50391520	50391521	chunk0119_453_1	24.0346	AR_DHT_Control	chr22	50391456	50391610	-426858	+	AluJr	SINE	Alu	127	293	-19	2
chr22	50427285	50427286	chunk0120_460_1	54.5535	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr22	50427204	50427547	-390921	-	L1MB4	LINE	L1	-1301	4845	4507	2
chr22	50675525	50675526	chunk0120_466_1	7.11634	AR_DHT_Control	chr22	50675413	50675908	-142560	+	(CAGTGTG)n	Simple_repeat	Simple_repeat	1	527	0	2
chr3	357039	357040	chunk0120_2_1	7.53305	AR_DHT_Control	chr3	356392	357085	-197938474	-	L2a	LINE	L2	0	3426	2603	2
chr3	424681	424682	chunk0120_6_1	43.2556	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	424611	424722	-197870837	+	MIR	SINE	MIR	140	262	0	2
chr3	900652	900653	chunk0120_8_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	900183	900825	-197394734	+	L1MA6	LINE	L1	399	1422	-6144	2
chr3	922079	922080	chunk0120_9_1	7.36432	AR_DHT_Control	chr3	922044	922952	-197372607	+	L2a	LINE	L2	2477	3426	0	2
chr3	990764	990765	chunk0120_10_1	10.1214	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	990541	991056	-197304503	+	(ATGG)n	Simple_repeat	Simple_repeat	1	515	0	2
chr3	1238189	1238190	chunk0120_14_1	14.41592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	1237098	1238842	-197056717	+	L1PBa	LINE	L1	1833	3604	-3258	2
chr3	1506344	1506345	chunk0120_17_1	54.0991	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	1506297	1506504	-196789055	+	MER58A	DNA	hAT-Charlie	17	224	0	2
chr3	1950361	1950362	chunk0120_21_1	10.0576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	1950346	1950393	-196345166	-	MER58A	DNA	hAT-Charlie	-143	81	37	2
chr3	2026663	2026664	chunk0120_27_1	28.1332	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	2026597	2026705	-196268854	+	MIRc	SINE	MIR	152	259	-9	2
chr3	2039053	2039054	chunk0120_28_1	15.02623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	2038869	2039126	-196256433	+	MIR	SINE	MIR	1	268	0	2
chr3	2650852	2650853	chunk0120_39_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	2650114	2650925	-195644634	+	Tigger1	DNA	TcMar-Tigger	1577	2407	-11	2
chr3	2844937	2844938	chunk0120_42_1	36.3779	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	2844800	2845151	-195450408	+	Tigger13a	DNA	TcMar-Tigger	4	368	-403	2
chr3	3103481	3103482	chunk0120_54_1	14.6406	AR_DHT_Control	chr3	3103313	3103568	-195191991	+	MER112	DNA	hAT-Charlie	7	256	-5	2
chr3	3137723	3137724	chunk0120_61_1	14.69098	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	3137690	3138517	-195157042	-	HAL1	LINE	L1	-209	2298	1340	2
chr3	3413543	3413544	chunk0120_70_1	14.2911	AR_DHT_Control	chr3	3413495	3414607	-194880952	+	L1PB1	LINE	L1	2583	3686	-2460	2
chr3	3636914	3636915	chunk0120_79_1	16.91046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	3636712	3636920	-194658639	-	MIR	SINE	MIR	-10	252	33	2
chr3	3862117	3862118	chunk0120_86_1	20.6389	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	3861398	3862484	-194433075	-	L1MC4	LINE	L1	-5	8037	6907	2
chr3	3928979	3928980	chunk0120_87_1	43.3646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	3928871	3929537	-194366022	-	ERVL-B4-int	LTR	ERVL	0	5654	5001	2
chr3	4300881	4300882	chunk0120_94_1	4.9245	AR_DHT_Control	chr3	4300541	4300980	-193994579	+	Tigger13a	DNA	TcMar-Tigger	196	667	-104	2
chr3	4322820	4322821	chunk0120_96_1	98.3314	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	4322679	4322878	-193972681	+	L1MB7	LINE	L1	5477	5643	-541	2
chr3	4687379	4687380	chunk0120_114_1	16.9696	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	4687316	4687528	-193608031	-	MIR	SINE	MIR	-41	221	8	2
chr3	4896183	4896184	chunk0120_126_1	52.66535	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	4896104	4896309	-193399250	+	MER58A	DNA	hAT-Charlie	2	223	-1	2
chr3	4899818	4899819	chunk0120_129_1	42.4632	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	4899705	4899891	-193395668	-	MIRc	SINE	MIR	-78	190	3	2
chr3	4935748	4935749	chunk0120_131_1	5.14476	AR_DHT_Control	chr3	4935325	4935890	-193359669	+	L2a	LINE	L2	2817	3424	-2	2
chr3	5344344	5344345	chunk0120_151_1	6.64592	AR_DHT_Control	chr3	5344224	5344628	-192950931	-	L1ME3B	LINE	L1	-1	6172	5685	2
chr3	5356177	5356178	chunk0120_156_1	8.93364	AR_DHT_Control	chr3	5355792	5356194	-192939365	-	L1MD2	LINE	L1	-98	6261	5866	2
chr3	5484255	5484256	chunk0120_157_1	12.2363	AR_DHT_Control	chr3	5483681	5484404	-192811155	+	L1MA10	LINE	L1	5602	6323	-11	2
chr3	5644913	5644914	chunk0120_164_1	87.05991	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	5643773	5644937	-192650622	+	L1PA10	LINE	L1	4984	6152	-16	2
chr3	5744247	5744248	chunk0120_166_1	8.13469	AR_DHT_Control	chr3	5743792	5744269	-192551290	+	ERVL-B4-int	LTR	ERVL	5240	5714	0	2
chr3	5876867	5876868	chunk0120_169_1	15.5235	AR_DHT_Control	chr3	5876617	5877032	-192418527	-	MLT2B4	LTR	ERVL	-36	520	1	2
chr3	5885501	5885502	chunk0120_171_1	31.066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	5885305	5885742	-192409817	+	LTR37B	LTR	ERV1	21	468	0	2
chr3	6125616	6125617	chunk0120_178_1	35.2314	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	6125314	6125925	-192169634	+	HAL1M8	LINE	L1	3	665	-2326	2
chr3	6283525	6283526	chunk0120_180_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	6282952	6289750	-192005809	+	L1PA16	LINE	L1	2	6933	-2	2
chr3	6571493	6571494	chunk0120_181_1	4.83532	AR_DHT_Control	chr3	6571345	6571619	-191723940	+	HAL1b	LINE	L1	1252	1530	-891	2
chr3	6709265	6709266	chunk0120_183_1	16.88485	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	6708935	6709322	-191586237	+	L1PB3	LINE	L1	4964	5348	-798	2
chr3	6902881	6902882	chunk0120_190_1	34.8186	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	6902850	6902882	-191392677	+	(AC)n	Simple_repeat	Simple_repeat	1	32	0	2
chr3	7038651	7038652	chunk0120_193_1	83.9576	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	7038649	7038811	-191256748	-	MIR	SINE	MIR	-16	252	89	2
chr3	7058995	7058996	chunk0120_195_1	6.98475	AR_DHT_Control	chr3	7058582	7059167	-191236392	-	LTR10C	LTR	ERV1	0	591	1	2
chr3	7160868	7160869	chunk0120_200_1	217.9449	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	7160755	7160978	-191134581	+	L2b	LINE	L2	3199	3426	0	2
chr3	7382573	7382574	chunk0120_210_1	340.1634	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	7382511	7382633	-190912926	+	L2a	LINE	L2	3299	3421	-5	2
chr3	7388636	7388637	chunk0120_212_1	45.5591	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	7388312	7391261	-190904298	-	L1PA17	LINE	L1	-2365	4484	1517	2
chr3	7429653	7429654	chunk0120_213_1	7.77201	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	7429528	7429738	-190865821	-	MIRc	SINE	MIR	-28	240	37	2
chr3	7433374	7433375	chunk0120_216_1	28.80861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	7433140	7433636	-190861923	-	ERVL-E-int	LTR	ERVL	-791	4876	4363	2
chr3	8045677	8045678	chunk0120_222_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	8040284	8046328	-190249231	+	L1PB1	LINE	L1	267	6506	-361	2
chr3	8138226	8138227	chunk0120_223_1	15.4338	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	8138159	8138315	-190157244	+	L1ME3Cz	LINE	L1	829	988	-9	2
chr3	8202309	8202310	chunk0120_227_1	45.9479	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	8202217	8202327	-190093232	-	L2a	LINE	L2	0	3426	3308	2
chr3	8220381	8220382	chunk0120_229_1	27.20977	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	8220116	8221412	-190074147	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	2
chr3	8282699	8282700	chunk0120_230_1	14.2975	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	8282556	8282761	-190012798	+	L2a	LINE	L2	3194	3424	-2	2
chr3	8431510	8431511	chunk0120_233_1	17.4573	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	8431276	8431913	-189863646	+	L1MC3	LINE	L1	6897	7600	-185	2
chr3	8583059	8583060	chunk0120_243_1	12.91659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	8582506	8583175	-189712384	+	L2a	LINE	L2	2701	3426	0	2
chr3	8710197	8710198	chunk0120_246_1	7.48244	AR_DHT_Control	chr3	8710124	8710216	-189585343	+	MamTip2	DNA	hAT-Tip100	96	192	-113	2
chr3	8801835	8801836	chunk0120_248_1	45.5329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	8800427	8801928	-189493631	+	L1MB8	LINE	L1	1128	2831	-4206	2
chr3	8803858	8803859	chunk0120_249_1	7.91873	AR_DHT_Control	chr3	8803390	8805013	-189490546	+	L1MC1	LINE	L1	4697	6333	0	2
chr3	8910207	8910208	chunk0120_252_1	30.5071	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	8909933	8910318	-189385241	+	HAL1	LINE	L1	1673	2063	-444	2
chr3	8932685	8932686	chunk0120_253_1	17.2447	AR_DHT_Control	chr3	8930941	8932815	-189362744	+	L1ME1	LINE	L1	4241	5992	-360	2
chr3	9054998	9054999	chunk0120_257_1	25.86277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	9054976	9055089	-189240470	+	L4_B_Mam	LINE	RTE-X	4832	4941	0	2
chr3	9149705	9149706	chunk0120_264_1	8.65676	AR_DHT_Control	chr3	9149379	9149779	-189145780	+	MLT1H	LTR	ERVL-MaLR	1	403	-146	2
chr3	9194716	9194717	chunk0120_266_1	62.5776	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	9194591	9194747	-189100812	-	MIR3	SINE	MIR	-22	186	15	2
chr3	9226591	9226592	chunk0120_268_1	4.83274	AR_DHT_Control	chr3	9226529	9226728	-189068831	-	Plat_L3	LINE	CR1	-574	3012	2804	2
chr3	9351776	9351777	chunk0120_272_1	4.67092	AR_DHT_Control	chr3	9351576	9351795	-188943764	+	Tigger3a	DNA	TcMar-Tigger	1	230	-118	2
chr3	9615321	9615322	chunk0120_281_1	16.66514	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	9615211	9615513	-188680046	+	Zaphod	DNA	hAT-Tip100	422	722	-3309	2
chr3	9649114	9649115	chunk0120_282_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	9648895	9649190	-188646369	-	AluSz	SINE	Alu	-15	297	2	2
chr3	9774689	9774690	chunk0120_287_1	169.1719	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	9774556	9774952	-188520607	+	L1ME4c	LINE	L1	1	449	-381	2
chr3	9803531	9803532	chunk0120_291_1	84.8564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	9803245	9803576	-188491983	-	L3	LINE	CR1	-72	4027	3667	2
chr3	9935214	9935215	chunk0120_297_1	8.55856	AR_DHT_Control	chr3	9935005	9935947	-188359612	-	L2a	LINE	L2	0	3375	2301	2
chr3	9970146	9970147	chunk0120_300_1	13.19828	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	9970035	9970245	-188325314	-	MIRb	SINE	MIR	0	268	64	2
chr3	9976552	9976553	chunk0120_303_1	98.475	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	9976505	9976617	-188318942	+	L3	LINE	CR1	3904	4043	-56	2
chr3	10202710	10202711	chunk0120_310_1	22.9162	AR_DHT_Control	chr3	10202680	10202983	-188092576	-	AluJo	SINE	Alu	0	312	7	2
chr3	10204106	10204107	chunk0120_312_1	31.21469	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	10204049	10204119	-188091440	+	Tigger15a	DNA	TcMar-Tigger	152	223	-492	2
chr3	10283793	10283794	chunk0120_316_1	5.66854	AR_DHT_Control	chr3	10283788	10283991	-188011568	-	MIRb	SINE	MIR	-19	249	7	2
chr3	10286111	10286112	chunk0120_317_1	4.60831	AR_DHT_Control	chr3	10285995	10286139	-188009420	+	MIRc	SINE	MIR	18	184	-84	2
chr3	10399648	10399649	chunk0120_321_1	81.8776	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	10399319	10399652	-187895907	+	L2a	LINE	L2	3032	3423	-3	2
chr3	10795999	10796000	chunk0120_332_1	99.5738	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	10795803	10797072	-187498487	+	L1MA9	LINE	L1	4861	6150	-162	2
chr3	10812206	10812207	chunk0120_333_1	17.82856	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	10812022	10812233	-187483326	-	MIR	SINE	MIR	-32	230	2	2
chr3	10855707	10855708	chunk0120_335_1	14.8069	AR_DHT_Control	chr3	10855594	10855708	-187439851	-	L2c	LINE	L2	-13	3374	3247	2
chr3	10902907	10902908	chunk0120_336_1	20.15729	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	10902878	10903038	-187392521	+	MIR	SINE	MIR	92	256	-6	2
chr3	10983114	10983115	chunk0120_337_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	10983045	10983538	-187312021	-	MER113	DNA	hAT-Charlie	-21	500	1	2
chr3	11314625	11314626	chunk0120_342_1	122.2187	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	11314501	11314647	-186980912	+	L1MB8	LINE	L1	6003	6138	-40	2
chr3	11431435	11431436	chunk0120_346_1	13.7713	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	11431417	11431701	-186863858	-	L1MB7	LINE	L1	-49	6135	5838	2
chr3	11493568	11493569	chunk0120_350_1	9.21264	AR_DHT_Control	chr3	11492492	11493592	-186801967	-	LTR28B	LTR	ERV1	-5	970	1	2
chr3	11504705	11504706	chunk0120_351_1	20.39214	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	11503778	11505175	-186790384	+	HAL1	LINE	L1	1047	2494	-13	2
chr3	11539961	11539962	chunk0120_353_1	39.95842	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	11539836	11540440	-186755119	-	L1ME2	LINE	L1	-272	5892	5273	2
chr3	11653665	11653666	chunk0120_361_1	27.89458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	11653292	11653860	-186641699	-	L1ME3A	LINE	L1	-164	6009	5409	2
chr3	11868227	11868228	chunk0120_373_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	11868187	11868228	-186427331	-	LTR56	LTR	ERV1	-57	388	347	2
chr3	12277115	12277116	chunk0120_384_1	27.9434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	12276969	12277182	-186018377	-	L1MB7	LINE	L1	-96	6088	5872	2
chr3	12487053	12487054	chunk0120_396_1	15.7936	AR_DHT_Control	chr3	12486536	12487115	-185808444	-	L1MB7	LINE	L1	0	6184	5577	2
chr3	12631728	12631729	chunk0120_404_1	13.7752	AR_DHT_Control	chr3	12631678	12631824	-185663735	+	MER91A	DNA	hAT-Tip100	14	164	-32	2
chr3	12638237	12638238	chunk0120_405_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	12637993	12638250	-185657309	+	L2a	LINE	L2	3149	3424	-2	2
chr3	12655633	12655634	chunk0120_408_1	47.14769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	12655385	12656045	-185639514	+	L1MB4	LINE	L1	5471	6120	-60	2
chr3	12967909	12967910	chunk0120_417_1	5.77762	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	12967887	12967969	-185327590	+	G-rich	Low_complexity	Low_complexity	1	85	0	2
chr3	12979571	12979572	chunk0120_419_1	124.9615	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	12979531	12979655	-185315904	+	L1ME4b	LINE	L1	757	889	-3	2
chr3	13021680	13021681	chunk0120_421_1	7.16019	AR_DHT_Control	chr3	13021649	13021749	-185273810	-	MIRb	SINE	MIR	-79	189	86	2
chr3	13154993	13154994	chunk0120_426_1	54.5785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	13154476	13155942	-185139617	+	L1M4	LINE	L1	2486	3964	-2182	2
chr3	13256275	13256276	chunk0120_427_1	32.98692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	13256155	13256361	-185039198	+	L1MB4	LINE	L1	6019	6180	0	2
chr3	13374131	13374132	chunk0120_430_1	5.77611	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	13373965	13374404	-184921155	+	(ACTCAC)n	Simple_repeat	Simple_repeat	1	456	0	2
chr3	13413688	13413689	chunk0120_432_1	124.2845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	13413664	13413876	-184881683	+	L1MB3	LINE	L1	5969	6181	-2	2
chr3	13524554	13524555	chunk0120_438_1	10.493	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	13524426	13524637	-184770922	+	Charlie1	DNA	hAT-Charlie	2011	2209	-572	2
chr3	13724616	13724617	chunk0120_441_1	10.1791	AR_DHT_Control	chr3	13724441	13724881	-184570678	-	L1MDa	LINE	L1	-1077	5460	4956	2
chr3	14229199	14229200	chunk0120_446_1	189.6384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	14228817	14229798	-184065761	+	HERVK3-int	LTR	ERVK	6223	7202	0	2
chr3	14265691	14265692	chunk0120_452_1	16.08507	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	14265532	14265767	-184029792	+	L1ME3Cz	LINE	L1	465	733	-264	2
chr3	14295965	14295966	chunk0120_454_1	184.25717	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	14295851	14296009	-183999550	+	Tigger1	DNA	TcMar-Tigger	2254	2418	0	2
chr3	14327385	14327386	chunk0121_1_1	61.7558	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	14326739	14327449	-183968110	+	L1ME2	LINE	L1	5313	5980	-184	2
chr3	14336505	14336506	chunk0121_2_1	7.92341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	14336453	14336685	-183958874	-	L1ME5	LINE	L1	-3	6191	5958	2
chr3	14388353	14388354	chunk0121_3_1	13.6808	AR_DHT_Control	chr3	14388251	14388445	-183907114	-	L2b	LINE	L2	-212	3163	2956	2
chr3	14635108	14635109	chunk0121_12_1	10.2385	AR_DHT_Control	chr3	14635035	14635123	-183660436	+	L2b	LINE	L2	3307	3422	-4	2
chr3	14730759	14730760	chunk0121_19_1	5.46037	AR_DHT_Control	chr3	14730551	14730942	-183564617	-	L1ME3A	LINE	L1	-384	5789	5367	2
chr3	15207183	15207184	chunk0121_30_1	33.21615	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	15207029	15208174	-183087385	-	Tigger3b	DNA	TcMar-Tigger	0	1231	2	2
chr3	15223774	15223775	chunk0121_34_1	7.36432	AR_DHT_Control	chr3	15223737	15223847	-183071712	+	L2b	LINE	L2	3268	3375	0	2
chr3	15311179	15311180	chunk0121_38_1	6.28518	AR_DHT_Control	chr3	15311146	15311283	-182984276	-	MIRc	SINE	MIR	-2	266	126	2
chr3	15529902	15529903	chunk0121_47_1	11.5247	AR_DHT_Control	chr3	15529796	15530462	-182765097	-	L2a	LINE	L2	0	3426	2629	2
chr3	15565277	15565278	chunk0121_49_1	34.9826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	15565181	15565291	-182730268	+	MIRb	SINE	MIR	57	171	-97	2
chr3	15612150	15612151	chunk0121_51_1	23.67823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	15612099	15612711	-182682848	-	L1M7	LINE	L1	-4384	2113	1471	2
chr3	15673645	15673646	chunk0121_58_1	81.3783	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	15673369	15673925	-182621634	-	L2a	LINE	L2	-2	3424	2860	2
chr3	15712968	15712969	chunk0121_62_1	9.96971	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	15712636	15712974	-182582585	+	L1ME3C	LINE	L1	5664	5838	-285	2
chr3	15782182	15782183	chunk0121_68_1	50.589	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	15781978	15782196	-182513363	-	MER106A	DNA	hAT-Charlie	0	236	5	2
chr3	15897442	15897443	chunk0121_71_1	5.3309	AR_DHT_Control	chr3	15897354	15897498	-182398061	-	Charlie15a	DNA	hAT-Charlie	0	224	77	2
chr3	15905245	15905246	chunk0121_76_1	67.72939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	15905161	15905391	-182390168	-	MIR	SINE	MIR	-10	252	7	2
chr3	15989505	15989506	chunk0121_80_1	10.1791	AR_DHT_Control	chr3	15989391	15989821	-182305738	-	L1MC1	LINE	L1	-574	5934	5483	2
chr3	16056383	16056384	chunk0121_81_1	10.8241	AR_DHT_Control	chr3	16056101	16056704	-182238855	+	L2b	LINE	L2	2705	3375	0	2
chr3	16104967	16104968	chunk0121_84_1	6.6833	AR_DHT_Control	chr3	16104496	16105153	-182190406	-	L1ME3A	LINE	L1	-5	6168	5445	2
chr3	16178256	16178257	chunk0121_85_1	5.14593	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	16177926	16178306	-182117253	+	(TG)n	Simple_repeat	Simple_repeat	1	396	0	2
chr3	16329281	16329282	chunk0121_86_1	5.20246	AR_DHT_Control	chr3	16328970	16329329	-181966230	+	MSTD	LTR	ERVL-MaLR	1	396	0	2
chr3	16576689	16576690	chunk0121_92_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	16576054	16577891	-181717668	+	L1MA4	LINE	L1	411	2319	-5247	2
chr3	16760527	16760528	chunk0121_94_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	16756744	16760973	-181534586	-	L1MA2	LINE	L1	-2971	4594	4	2
chr3	17065644	17065645	chunk0121_102_1	5.0408	AR_DHT_Control	chr3	17065196	17065938	-181229621	-	L3	LINE	CR1	-1904	2195	1330	2
chr3	17373001	17373002	chunk0121_115_1	53.6988	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	17372898	17373229	-180922330	-	MER58B	DNA	hAT-Charlie	-1	340	1	2
chr3	17481339	17481340	chunk0121_121_1	31.9742	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	17479756	17481470	-180814089	+	MER52A	LTR	ERV1	1	1755	0	2
chr3	17553343	17553344	chunk0121_125_1	21.40566	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	17553284	17553492	-180742067	+	L1MC5a	LINE	L1	174	381	-2396	2
chr3	17805793	17805794	chunk0121_128_1	85.84	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	17805436	17805839	-180489720	-	LTR16A2	LTR	ERVL	-92	403	4	2
chr3	18570295	18570296	chunk0121_135_1	19.24764	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	18570090	18570302	-179725257	+	L2c	LINE	L2	3196	3417	-9	2
chr3	18768106	18768107	chunk0121_139_1	50.87731	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	18768008	18768386	-179527173	-	L2b	LINE	L2	-1	3374	3000	2
chr3	18818399	18818400	chunk0121_143_1	62.1552	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	18817415	18819597	-179475962	-	L1MB8	LINE	L1	-4704	2163	18	2
chr3	18883664	18883665	chunk0121_145_1	9.70251	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	18883296	18884312	-179411247	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1065	-3	2
chr3	19039748	19039749	chunk0121_148_1	6.93299	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19037716	19040354	-179255205	-	L1P3	LINE	L1	-534	5620	2946	2
chr3	19050582	19050583	chunk0121_149_1	4.36845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19050251	19051113	-179244446	-	MER57A-int	LTR	ERV1	-2846	2025	882	2
chr3	19073045	19073046	chunk0121_150_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19071418	19073248	-179222311	+	L1MC2	LINE	L1	3945	5830	-514	2
chr3	19151523	19151524	chunk0121_151_1	9.38183	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19151519	19151551	-179144008	+	(TAT)n	Simple_repeat	Simple_repeat	1	34	0	2
chr3	19256411	19256412	chunk0121_155_1	10.4518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19256359	19256641	-179038918	-	LTR89	LTR	ERVL?	-577	302	4	2
chr3	19365599	19365600	chunk0121_157_1	34.37761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19365590	19365950	-178929609	-	L2a	LINE	L2	0	3426	3045	2
chr3	19390125	19390126	chunk0121_160_1	39.26681	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19389932	19390141	-178905418	+	MIRb	SINE	MIR	53	268	0	2
chr3	19521404	19521405	chunk0121_162_1	15.8249	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	19521317	19521479	-178774080	+	MIR	SINE	MIR	84	256	-6	2
chr3	19889257	19889258	chunk0121_167_1	24.91215	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	19888925	19889365	-178406194	+	HERVL40-int	LTR	ERVL	142	570	-4960	2
chr3	19910999	19911000	chunk0121_171_1	99.66255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	19908955	19911279	-178384280	+	L1M1	LINE	L1	12	2303	-5262	2
chr3	20055916	20055917	chunk0121_178_1	51.939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	20055756	20056060	-178239499	-	L1ME2	LINE	L1	-103	6061	5729	2
chr3	20091357	20091358	chunk0121_183_1	13.92285	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	20091049	20091827	-178203732	-	L1MA5	LINE	L1	-2549	3594	2815	2
chr3	20092575	20092576	chunk0121_186_1	16.65985	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	20092528	20092696	-178202863	-	L1MA5	LINE	L1	-3637	2506	2374	2
chr3	20565453	20565454	chunk0121_191_1	9.44294	AR_DHT_Control	chr3	20564815	20565778	-177729781	-	L1MC1	LINE	L1	-25	6483	5461	2
chr3	21082718	21082719	chunk0121_200_1	9.21264	AR_DHT_Control	chr3	21081789	21083647	-177211912	-	L1PA16	LINE	L1	-10	6156	4258	2
chr3	21109804	21109805	chunk0121_202_1	13.71174	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	21109678	21109874	-177185685	-	MIRb	SINE	MIR	-36	232	36	2
chr3	21514493	21514494	chunk0121_205_1	42.5226	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	21514421	21514845	-176780714	+	MER57B2	LTR	ERV1	3	403	0	2
chr3	21531534	21531535	chunk0121_207_1	41.7997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	21531182	21532064	-176763495	+	L1MC1	LINE	L1	5417	6323	-10	2
chr3	21682988	21682989	chunk0121_211_1	5.55081	AR_DHT_Control	chr3	21682960	21683147	-176612412	-	MER5A	DNA	hAT-Charlie	0	189	1	2
chr3	21730969	21730970	chunk0121_215_1	54.2724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	21730788	21731276	-176564283	-	L1MC4a	LINE	L1	-1987	5895	5399	2
chr3	21810016	21810017	chunk0121_219_1	5.6425	AR_DHT_Control	chr3	21809846	21810319	-176485240	+	L1MDb	LINE	L1	3842	4353	-2191	2
chr3	21829119	21829120	chunk0121_221_1	12.18928	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	21828653	21829128	-176466431	-	MLT1D	LTR	ERVL-MaLR	-2	503	12	2
chr3	21836721	21836722	chunk0121_222_1	71.6128	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	21836539	21836820	-176458739	-	MER58B	DNA	hAT-Charlie	0	341	48	2
chr3	22091459	22091460	chunk0121_234_1	80.2511	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	22091324	22091726	-176203833	+	ERVL-E-int	LTR	ERVL	1334	1759	-3908	2
chr3	22491548	22491549	chunk0121_240_1	21.39585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	22491472	22491582	-175803977	-	L2a	LINE	L2	0	3426	3317	2
chr3	22682967	22682968	chunk0121_242_1	28.30401	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	22682925	22683098	-175612461	-	MIRb	SINE	MIR	-22	246	72	2
chr3	22727560	22727561	chunk0121_244_1	5.95444	AR_DHT_Control	chr3	22727404	22727753	-175567806	+	L2c	LINE	L2	3019	3378	-9	2
chr3	22836458	22836459	chunk0121_245_1	6.48643	AR_DHT_Control	chr3	22836068	22836786	-175458773	-	MER50	LTR	ERV1	-28	706	1	2
chr3	22875725	22875726	chunk0121_246_1	8.62865	AR_DHT_Control	chr3	22875640	22875733	-175419826	-	L2a	LINE	L2	0	3426	3331	2
chr3	22959522	22959523	chunk0121_251_1	15.6041	AR_DHT_Control	chr3	22959442	22959907	-175335652	-	L2a	LINE	L2	0	3426	2933	2
chr3	23020282	23020283	chunk0121_253_1	6.48643	AR_DHT_Control	chr3	23019619	23021447	-175274112	+	L1PB1	LINE	L1	4	1960	-4903	2
chr3	23142275	23142276	chunk0121_261_1	7.36432	AR_DHT_Control	chr3	23142131	23142397	-175153162	+	L1PA16	LINE	L1	5909	6157	-9	2
chr3	23288393	23288394	chunk0121_268_1	152.22448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	23286973	23288730	-175006829	-	L1MA3	LINE	L1	-2038	5527	3737	2
chr3	23316950	23316951	chunk0121_270_1	6.94497	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	23314429	23317469	-174978090	-	L1M1	LINE	L1	-4387	3178	231	2
chr3	23321074	23321075	chunk0121_273_1	47.30228	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	23320866	23321229	-174974330	-	MLT1C	LTR	ERVL-MaLR	-1	466	117	2
chr3	23331473	23331474	chunk0121_274_1	13.36448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	23331260	23331879	-174963680	-	L2a	LINE	L2	-6	3420	2782	2
chr3	23528303	23528304	chunk0121_280_1	45.1654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	23528300	23528671	-174766888	-	LTR60B	LTR	ERV1	-24	741	372	2
chr3	23576788	23576789	chunk0121_283_1	22.19238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	23576724	23576813	-174718746	+	L2c	LINE	L2	3294	3387	0	2
chr3	23600790	23600791	chunk0121_288_1	5.69226	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	23600769	23600947	-174694612	-	MIRb	SINE	MIR	-61	207	4	2
chr3	23673885	23673886	chunk0121_290_1	7.74912	AR_DHT_Control	chr3	23673044	23674482	-174621077	-	L1MC3	LINE	L1	-8	7777	6287	2
chr3	24018939	24018940	chunk0121_302_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	24018754	24020004	-174275555	-	LTR2752	LTR	ERV1	0	1263	1	2
chr3	24141490	24141491	chunk0121_310_1	122.63112	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24141381	24141627	-174153932	+	L2a	LINE	L2	3130	3425	-1	2
chr3	24213398	24213399	chunk0121_314_1	10.8679	AR_DHT_Control	chr3	24213259	24213664	-174081895	-	L4_C_Mam	LINE	RTE-X	-4143	995	424	2
chr3	24254471	24254472	chunk0121_319_1	9.08241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24254461	24254548	-174041011	-	MARNA	DNA	TcMar-Mariner	-393	193	105	2
chr3	24405135	24405136	chunk0121_331_1	71.04493	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	24405130	24405191	-173890368	-	L2b	LINE	L2	0	3375	3316	2
chr3	24470449	24470450	chunk0121_335_1	5.40567	AR_DHT_Control	chr3	24470330	24470561	-173824998	+	MIR	SINE	MIR	3	256	-6	2
chr3	24551388	24551389	chunk0121_342_1	8.84892	AR_DHT_Control	chr3	24551370	24551486	-173744073	-	L2a	LINE	L2	-9	3417	3302	2
chr3	24592925	24592926	chunk0121_343_1	30.60364	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	24592855	24593268	-173702291	+	Tigger15a	DNA	TcMar-Tigger	28	482	-233	2
chr3	24646907	24646908	chunk0121_347_1	14.13962	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24646511	24646915	-173648644	+	MamGypLTR1a	LTR	Gypsy	364	771	-13	2
chr3	24658265	24658266	chunk0121_349_1	25.76127	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24657375	24658730	-173636829	-	L1MA5A	LINE	L1	-53	6946	5586	2
chr3	24678335	24678336	chunk0121_350_1	4.53037	AR_DHT_Control	chr3	24678197	24678403	-173617156	+	MLT1N2	LTR	ERVL-MaLR	368	562	0	2
chr3	24687272	24687273	chunk0121_351_1	5.95444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24687013	24687411	-173608148	-	Tigger10	DNA	TcMar-Tigger	-1224	620	225	2
chr3	24771327	24771328	chunk0121_353_1	62.7761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	24771028	24772182	-173523377	-	MER97d	DNA	hAT-Tip100	0	1205	4	2
chr3	24772794	24772795	chunk0121_355_1	17.3576	AR_DHT_Control	chr3	24772679	24772901	-173522658	+	L1ME5	LINE	L1	5528	5759	-435	2
chr3	24790919	24790920	chunk0121_356_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24790907	24791038	-173504521	-	MIRb	SINE	MIR	-76	192	55	2
chr3	24817517	24817518	chunk0121_357_1	44.0873	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	24816941	24818307	-173477252	-	L1MEf	LINE	L1	-4251	2164	806	2
chr3	24878099	24878100	chunk0121_367_1	6.75904	AR_DHT_Control	chr3	24878075	24878321	-173417238	-	L1MEd	LINE	L1	-3665	2481	2204	2
chr3	25018110	25018111	chunk0121_372_1	8.41452	AR_DHT_Control	chr3	25017785	25018115	-173277444	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	2
chr3	25037792	25037793	chunk0121_373_1	5.80103	AR_DHT_Control	chr3	25037620	25037965	-173257594	-	L2c	LINE	L2	-6	3381	3041	2
chr3	25055941	25055942	chunk0121_375_1	9.79111	AR_DHT_Control	chr3	25055825	25055951	-173239608	-	LTR16C	LTR	ERVL	-364	131	1	2
chr3	25079871	25079872	chunk0121_377_1	5.46037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	25078829	25079953	-173215606	-	L1ME2	LINE	L1	-1436	4883	3735	2
chr3	25080140	25080141	chunk0121_378_1	7.48058	AR_DHT_Control	chr3	25079954	25080948	-173214611	-	L1MB4	LINE	L1	-29	6151	5082	2
chr3	25117402	25117403	chunk0121_379_1	13.197	AR_DHT_Control	chr3	25117067	25117452	-173178107	-	L2b	LINE	L2	0	3375	2991	2
chr3	25189397	25189398	chunk0121_380_1	7.80475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	25189093	25189432	-173106127	-	L4_A_Mam	LINE	RTE-X	-383	4607	4269	2
chr3	25262485	25262486	chunk0121_389_1	252.46449	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	25262353	25262842	-173032717	-	MLT1D	LTR	ERVL-MaLR	0	627	1	2
chr3	25286911	25286912	chunk0121_393_1	32.2672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	25286870	25286948	-173008611	-	MER113	DNA	hAT-Charlie	-94	427	351	2
chr3	25397333	25397334	chunk0121_396_1	15.3887	AR_DHT_Control	chr3	25390904	25397567	-172897992	-	L1PB1	LINE	L1	-2	6865	3	2
chr3	25427308	25427309	chunk0121_398_1	8.71732	AR_DHT_Control	chr3	25427306	25427506	-172868053	-	MIR	SINE	MIR	-51	211	6	2
chr3	25478415	25478416	chunk0121_401_1	6.18182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	25478362	25478573	-172816986	-	MamRep137	DNA	TcMar-Tigger	-177	333	107	2
chr3	25534201	25534202	chunk0121_403_1	7.38582	AR_DHT_Control	chr3	25534148	25534374	-172761185	+	MIR	SINE	MIR	18	262	0	2
chr3	25595761	25595762	chunk0121_404_1	24.8881	AR_DHT_Control	chr3	25595596	25595767	-172699792	+	MER3	DNA	hAT-Charlie	2	187	-22	2
chr3	25735496	25735497	chunk0121_413_1	6.45888	AR_DHT_Control	chr3	25734937	25735841	-172559718	+	L1MEg	LINE	L1	4850	5803	-376	2
chr3	25739345	25739346	chunk0121_415_1	22.3695	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	25739247	25739459	-172556100	-	MER58A	DNA	hAT-Charlie	0	224	5	2
chr3	25837164	25837165	chunk0121_420_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	25836431	25838915	-172456644	+	L1MA9	LINE	L1	1552	3341	-4225	2
chr3	25854569	25854570	chunk0121_424_1	129.40327	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	25854551	25854994	-172440565	-	LTR16A	LTR	ERVL	0	451	1	2
chr3	25950707	25950708	chunk0121_432_1	45.56144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	25950306	25950801	-172344758	-	LTR33	LTR	ERVL	-7	508	5	2
chr3	25967436	25967437	chunk0121_433_1	7.12934	AR_DHT_Control	chr3	25967426	25967686	-172327873	-	MIR	SINE	MIR	-1	261	4	2
chr3	25998755	25998756	chunk0121_434_1	21.0751	AR_DHT_Control	chr3	25997204	25999542	-172296017	-	L1PA6	LINE	L1	-3783	2363	1	2
chr3	26069177	26069178	chunk0121_435_1	191.9093	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26069142	26069342	-172226217	-	MIRb	SINE	MIR	-18	250	27	2
chr3	26101777	26101778	chunk0121_438_1	31.66294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26101411	26102100	-172193459	-	MER50	LTR	ERV1	-23	711	7	2
chr3	26136086	26136087	chunk0121_440_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26135955	26136184	-172159375	-	L2a	LINE	L2	-4	3422	3200	2
chr3	26146657	26146658	chunk0121_441_1	13.6789	AR_DHT_Control	chr3	26146546	26146658	-172148901	+	L2a	LINE	L2	3258	3425	-1	2
chr3	26374870	26374871	chunk0121_442_1	16.8516	AR_DHT_Control	chr3	26374293	26375365	-171920194	+	L1PREC2	LINE	L1	3489	4568	-1578	2
chr3	26375135	26375136	chunk0121_443_1	5.00965	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26374293	26375365	-171920194	+	L1PREC2	LINE	L1	3489	4568	-1578	2
chr3	26874740	26874741	chunk0121_453_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	26874421	26874907	-171420652	-	MLT1F1	LTR	ERVL-MaLR	0	569	46	2
chr3	26959156	26959157	chunk0121_454_1	34.8617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	26953636	26959822	-171335737	-	L1PA6	LINE	L1	-1	6153	5	2
chr3	27060579	27060580	chunk0121_459_1	7.57442	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27060348	27060587	-171234972	+	L1ME3B	LINE	L1	5944	6194	-48	2
chr3	27138638	27138639	chunk0121_462_1	5.60881	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27137921	27138643	-171156916	+	LTR41C	LTR	ERVL	1	701	0	2
chr3	27282033	27282034	chunk0121_465_1	64.6503	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27281029	27282135	-171013424	+	HAL1	LINE	L1	1013	2212	-295	2
chr3	27320667	27320668	chunk0122_4_1	11.4989	AR_DHT_Control	chr3	27320659	27320904	-170974655	+	MamRTE1	LINE	RTE-BovB	3438	3717	-95	2
chr3	27346750	27346751	chunk0122_8_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27346705	27346779	-170948780	-	L2c	LINE	L2	0	3387	3315	2
chr3	27450083	27450084	chunk0122_15_1	7.36432	AR_DHT_Control	chr3	27449921	27450125	-170845434	+	Tigger17c	DNA	TcMar-Tigger	1	203	-985	2
chr3	27690523	27690524	chunk0122_22_1	13.197	AR_DHT_Control	chr3	27687763	27693771	-170601788	+	L1MA1	LINE	L1	11	6412	-1153	2
chr3	27711083	27711084	chunk0122_24_1	42.4813	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27710757	27711284	-170584275	+	L1MC5	LINE	L1	8529	9052	-252	2
chr3	27877627	27877628	chunk0122_26_1	26.39126	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27877580	27877654	-170417905	-	MLT1K	LTR	ERVL-MaLR	-326	269	193	2
chr3	27880730	27880731	chunk0122_28_1	6.6351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27880233	27880849	-170414710	+	MER39	LTR	ERV1	1	705	-2	2
chr3	27895367	27895368	chunk0122_30_1	56.3366	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	27895242	27895463	-170400096	+	L1MB5	LINE	L1	6008	6231	-441	2
chr3	27909199	27909200	chunk0122_31_1	16.1385	AR_DHT_Control	chr3	27909026	27909301	-170386258	+	MLT1K	LTR	ERVL-MaLR	32	272	-323	2
chr3	27918455	27918456	chunk0122_32_1	39.0412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	27917842	27918527	-170377032	-	L1MC4a	LINE	L1	-965	6917	6300	2
chr3	28125698	28125699	chunk0122_38_1	5.95444	AR_DHT_Control	chr3	28125607	28125976	-170169583	-	L1MC2	LINE	L1	0	6344	5978	2
chr3	28139472	28139473	chunk0122_39_1	56.023	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	28139312	28139758	-170155801	+	MER70A	LTR	ERVL	4	450	-22	2
chr3	28186971	28186972	chunk0122_41_1	12.9759	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	28186619	28187046	-170108513	+	Tigger2	DNA	TcMar-Tigger	1	470	-2248	2
chr3	28295711	28295712	chunk0122_46_1	6.48643	AR_DHT_Control	chr3	28295635	28295729	-169999830	+	L2a	LINE	L2	3327	3426	0	2
chr3	28468901	28468902	chunk0122_47_1	19.73854	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	28467449	28469712	-169825847	+	L1MA2	LINE	L1	1252	3873	-3692	2
chr3	28544493	28544494	chunk0122_49_1	20.07141	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	28543744	28545324	-169750235	+	ERVL-B4-int	LTR	ERVL	3557	5240	-474	2
chr3	28553582	28553583	chunk0122_50_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	28553265	28553610	-169741949	-	MLT1I	LTR	ERVL-MaLR	-58	353	8	2
chr3	28621449	28621450	chunk0122_52_1	46.2627	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	28620773	28623247	-169672312	+	L1PA6	LINE	L1	2176	4655	-1491	2
chr3	28810945	28810946	chunk0122_61_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	28810590	28811250	-169484309	-	LTR1A1	LTR	ERV1	-130	669	1	2
chr3	28943799	28943800	chunk0122_66_1	6.83265	AR_DHT_Control	chr3	28943509	28943806	-169351753	+	Tigger19a	DNA	TcMar-Tigger	15	323	0	2
chr3	29192379	29192380	chunk0122_67_1	39.58566	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	29191684	29192552	-169103007	-	L1MA8	LINE	L1	-2368	5194	4318	2
chr3	29493343	29493344	chunk0122_71_1	30.51846	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	29493298	29493490	-168802069	+	MIR	SINE	MIR	14	212	-50	2
chr3	29522078	29522079	chunk0122_72_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	29522046	29522190	-168773369	-	LTR33A	LTR	ERVL	-6	514	354	2
chr3	29585545	29585546	chunk0122_74_1	50.203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	29585394	29585564	-168709995	+	MIRb	SINE	MIR	1	162	-106	2
chr3	29912969	29912970	chunk0122_80_1	189.8578	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	29912822	29913397	-168382162	-	L4_C_Mam	LINE	RTE-X	-800	4338	3728	2
chr3	30013403	30013404	chunk0122_88_1	40.59225	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	30013228	30013415	-168282144	-	MIRb	SINE	MIR	-6	262	72	2
chr3	30362542	30362543	chunk0122_96_1	20.51095	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	30361372	30363399	-167932160	+	L1MC4a	LINE	L1	5791	7878	-4	2
chr3	30751136	30751137	chunk0122_110_1	8.7059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	30750998	30751484	-167544075	+	MER51E	LTR	ERV1	1	479	-3	2
chr3	31166802	31166803	chunk0122_114_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	31166617	31166843	-167128716	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr3	31174405	31174406	chunk0122_115_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	31174405	31174445	-167121114	+	(TTTATT)n	Simple_repeat	Simple_repeat	1	41	0	2
chr3	31410841	31410842	chunk0122_125_1	9.46036	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	31410635	31411698	-166883861	+	L1MC3	LINE	L1	6706	7785	0	2
chr3	31432039	31432040	chunk0122_126_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	31431958	31432329	-166863230	-	LTR33	LTR	ERVL	-115	400	6	2
chr3	31471620	31471621	chunk0122_127_1	24.35	AR_DHT_Control	chr3	31471485	31471707	-166823852	-	L2a	LINE	L2	-289	3137	2910	2
chr3	31562220	31562221	chunk0122_130_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	31561643	31563242	-166732317	-	L1MA4A	LINE	L1	-5110	2456	730	2
chr3	31648698	31648699	chunk0122_132_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	31647822	31650279	-166645280	+	L1MA4A	LINE	L1	4	2782	-4086	2
chr3	31779806	31779807	chunk0122_137_1	14.6406	AR_DHT_Control	chr3	31778420	31780010	-166515549	+	L1PB1	LINE	L1	1982	3663	-3199	2
chr3	31831713	31831714	chunk0122_140_1	13.49933	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	31831570	31832380	-166463179	+	L1ME4b	LINE	L1	66	885	-7	2
chr3	31901657	31901658	chunk0122_142_1	5.86499	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	31901156	31901766	-166393793	+	L2b	LINE	L2	2731	3351	-24	2
chr3	31958792	31958793	chunk0122_144_1	4.83532	AR_DHT_Control	chr3	31958753	31958877	-166336682	+	MER58A	DNA	hAT-Charlie	19	142	-82	2
chr3	32095653	32095654	chunk0122_149_1	14.94491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	32095480	32095892	-166199667	-	L1MC4	LINE	L1	-623	7419	6927	2
chr3	32234246	32234247	chunk0122_161_1	21.03741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	32234061	32234700	-166060859	-	L1MC4a	LINE	L1	-50	7832	7180	2
chr3	32317197	32317198	chunk0122_169_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	32317096	32317273	-165978286	+	MIR	SINE	MIR	68	256	-6	2
chr3	32623814	32623815	chunk0122_179_1	13.2288	AR_DHT_Control	chr3	32623617	32624249	-165671310	-	L1MB5	LINE	L1	-216	5958	5354	2
chr3	32630366	32630367	chunk0122_181_1	33.2671	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	32630145	32630468	-165665091	+	MLT1I	LTR	ERVL-MaLR	116	448	0	2
chr3	32667182	32667183	chunk0122_183_1	58.6797	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	32666969	32667430	-165628129	+	Tigger3b	DNA	TcMar-Tigger	760	1231	0	2
chr3	32745617	32745618	chunk0122_192_1	144.49824	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr3	32745537	32745716	-165549843	+	L1ME2z	LINE	L1	5636	5823	-621	2
chr3	32794413	32794414	chunk0122_194_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	32794303	32794698	-165500861	-	L2c	LINE	L2	-6	3381	2929	2
chr3	33058941	33058942	chunk0122_198_1	39.5256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	33058929	33059136	-165236423	+	MER20	DNA	hAT-Charlie	1	211	-8	2
chr3	33070117	33070118	chunk0122_201_1	24.1875	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	33069811	33070198	-165225361	-	L1PA15	LINE	L1	-8	6157	5762	2
chr3	33165484	33165485	chunk0122_204_1	8.60744	AR_DHT_Control	chr3	33165007	33165526	-165130033	+	L1ME3A	LINE	L1	5603	6161	-12	2
chr3	33318392	33318393	chunk0122_214_1	19.67752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	33317935	33318672	-164976887	-	MLT1J2-int	LTR	ERVL-MaLR	-553	834	1	2
chr3	33482423	33482424	chunk0122_216_1	18.16175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	33482086	33482504	-164813055	-	MER65-int	LTR	ERV1	-4071	800	380	2
chr3	33583454	33583455	chunk0122_220_1	12.6499	AR_DHT_Control	chr3	33583454	33583662	-164711897	+	HAL1ME	LINE	L1	1960	2172	-293	2
chr3	33647708	33647709	chunk0122_223_1	8.0443	AR_DHT_Control	chr3	33647486	33647720	-164647839	-	MER58A	DNA	hAT-Charlie	-1	223	1	2
chr3	33657008	33657009	chunk0122_226_1	14.1561	AR_DHT_Control	chr3	33656272	33657099	-164638460	+	L1ME3G	LINE	L1	1	894	-30	2
chr3	33679651	33679652	chunk0122_228_1	20.54936	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	33678695	33680527	-164615032	+	L1MC1	LINE	L1	4591	6500	-8	2
chr3	33719252	33719253	chunk0122_229_1	6.89429	AR_DHT_Control	chr3	33718640	33719298	-164576261	-	L1ME2	LINE	L1	-18	6146	5444	2
chr3	33810826	33810827	chunk0122_235_1	8.95381	AR_DHT_Control	chr3	33810821	33810896	-164484663	-	L1MC4	LINE	L1	-1441	6601	6528	2
chr3	33856335	33856336	chunk0122_239_1	88.8936	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	33856249	33856849	-164438710	+	L1M7	LINE	L1	850	1527	-4691	2
chr3	34007875	34007876	chunk0122_242_1	15.4161	AR_DHT_Control	chr3	34007709	34007935	-164287624	+	L2b	LINE	L2	3127	3373	-2	2
chr3	34197380	34197381	chunk0122_243_1	7.37742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	34197004	34197682	-164097877	+	L1ME2	LINE	L1	5485	6163	-1	2
chr3	34315647	34315648	chunk0122_244_1	9.08241	AR_DHT_Control	chr3	34315574	34315699	-163979860	-	L1MD	LINE	L1	-805	5341	5199	2
chr3	34590079	34590080	chunk0122_246_1	40.6969	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	34587120	34592569	-163702990	-	L1PA15	LINE	L1	-20	6765	1227	2
chr3	34727816	34727817	chunk0122_250_1	10.0039	AR_DHT_Control	chr3	34727796	34727913	-163567646	-	MIRc	SINE	MIR	-118	150	32	2
chr3	34890513	34890514	chunk0122_255_1	75.2257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	34890358	34890698	-163404861	-	MER58B	DNA	hAT-Charlie	0	341	45	2
chr3	35042571	35042572	chunk0122_259_1	21.25213	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	35041842	35043042	-163252517	-	ERVL-E-int	LTR	ERVL	-650	5017	3822	2
chr3	35096503	35096504	chunk0122_261_1	8.27376	AR_DHT_Control	chr3	35095739	35097354	-163198205	-	L1M1	LINE	L1	-490	5815	4283	2
chr3	35159491	35159492	chunk0122_265_1	26.99192	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	35158224	35160432	-163135127	+	L1MCa	LINE	L1	3	2382	-4278	2
chr3	35508605	35508606	chunk0122_272_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	35508488	35508655	-162786904	+	L1MEd	LINE	L1	391	563	-6523	2
chr3	35529642	35529643	chunk0122_274_1	128.197	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	35528835	35531409	-162764150	+	L1MC1	LINE	L1	1	2594	-3727	2
chr3	35538777	35538778	chunk0122_276_1	19.14147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	35538730	35538891	-162756668	-	L2a	LINE	L2	-6	3420	3261	2
chr3	36058869	36058870	chunk0122_284_1	22.04084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36058473	36059767	-162235792	+	L1MC3	LINE	L1	5477	6824	-961	2
chr3	36142906	36142907	chunk0122_285_1	21.61309	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36142094	36143211	-162152348	-	L1PA17	LINE	L1	-902	5244	4146	2
chr3	36155711	36155712	chunk0122_288_1	65.54187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36154691	36156741	-162138818	+	L1MCb	LINE	L1	30	2361	-4390	2
chr3	36172875	36172876	chunk0122_291_1	32.7123	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	36172586	36173324	-162122235	-	ERV3-16A3_I-int	LTR	ERVL	0	5226	4472	2
chr3	36175648	36175649	chunk0122_292_1	8.88943	AR_DHT_Control	chr3	36173658	36176532	-162119027	-	L1M1	LINE	L1	-4431	3134	2	2
chr3	36187341	36187342	chunk0122_293_1	17.42649	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36186422	36191842	-162103717	-	L1PB1	LINE	L1	0	6867	1392	2
chr3	36242326	36242327	chunk0122_296_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	36242252	36242609	-162052950	-	L2c	LINE	L2	-1	3386	3053	2
chr3	36254843	36254844	chunk0122_297_1	8.79742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36254163	36255602	-162039957	+	L1PA10	LINE	L1	4862	6348	-5	2
chr3	36313092	36313093	chunk0122_298_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36312910	36313135	-161982424	+	LTR101_Mam	LTR	ERVL	589	827	-2	2
chr3	36564823	36564824	chunk0122_301_1	27.8123	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36564709	36566460	-161729099	-	L1MD1	LINE	L1	-794	5839	4024	2
chr3	36568262	36568263	chunk0122_302_1	6.67113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36567348	36568530	-161727029	-	L1PA7	LINE	L1	-8	6146	4956	2
chr3	36882425	36882426	chunk0122_305_1	86.8156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36882407	36883102	-161412457	+	L1MC4a	LINE	L1	4880	5610	-2272	2
chr3	36888067	36888068	chunk0122_307_1	34.0141	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	36887832	36888504	-161407055	+	L1MB8	LINE	L1	5472	6169	-9	2
chr3	36922957	36922958	chunk0122_311_1	14.4265	AR_DHT_Control	chr3	36922881	36923256	-161372303	+	MER83	LTR	ERV1	1	395	-53	2
chr3	36949530	36949531	chunk0122_313_1	8.27376	AR_DHT_Control	chr3	36949479	36950663	-161344896	+	L1MC5a	LINE	L1	479	1648	-1129	2
chr3	37041628	37041629	chunk0122_319_1	28.54499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	37041465	37041683	-161253876	+	MIRc	SINE	MIR	19	251	-17	2
chr3	37082511	37082512	chunk0122_325_1	267.4042	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	37082366	37082725	-161212834	-	L1MC1	LINE	L1	-19	6314	5970	2
chr3	37245267	37245268	chunk0122_341_1	4.59852	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	37245191	37245358	-161050201	-	MIR	SINE	MIR	-11	251	76	2
chr3	37263196	37263197	chunk0122_343_1	8.02791	AR_DHT_Control	chr3	37262974	37263284	-161032275	+	Tigger3c	DNA	TcMar-Tigger	202	518	-84	2
chr3	37279329	37279330	chunk0122_344_1	12.8831	AR_DHT_Control	chr3	37279210	37279624	-161015935	+	Tigger4	DNA	TcMar-Tigger	2	428	-2303	2
chr3	37293906	37293907	chunk0122_345_1	289.6344	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	37293767	37294079	-161001480	-	Tigger3a	DNA	TcMar-Tigger	-33	315	2	2
chr3	37339443	37339444	chunk0122_349_1	50.911	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	37339161	37339945	-160955614	-	L1MB5	LINE	L1	-280	5894	5086	2
chr3	37411761	37411762	chunk0122_351_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	37410319	37412626	-160882933	-	L1MA3	LINE	L1	-5219	2346	14	2
chr3	37796167	37796168	chunk0122_381_1	24.93379	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	37795931	37796461	-160499098	+	L2b	LINE	L2	2818	3364	-11	2
chr3	37832982	37832983	chunk0122_385_1	5.03761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	37832726	37833148	-160462411	-	LTR16E2	LTR	ERVL	-6	562	165	2
chr3	37932080	37932081	chunk0122_394_1	27.701	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	37931921	37932095	-160363464	+	L1M5	LINE	L1	4628	4816	-1330	2
chr3	37935062	37935063	chunk0122_395_1	13.1652	AR_DHT_Control	chr3	37935059	37935164	-160360395	-	L1ME4b	LINE	L1	-245	585	481	2
chr3	38135455	38135456	chunk0122_405_1	16.5871	AR_DHT_Control	chr3	38135236	38136292	-160159267	-	LTR5B	LTR	ERVK	0	1002	1	2
chr3	38189894	38189895	chunk0122_407_1	15.6556	AR_DHT_Control	chr3	38189845	38190120	-160105439	-	L2c	LINE	L2	-77	3310	3021	2
chr3	38298311	38298312	chunk0122_409_1	6.48643	AR_DHT_Control	chr3	38297623	38298423	-159997136	-	L1MC4	LINE	L1	-529	7513	6561	2
chr3	38354997	38354998	chunk0122_412_1	26.47133	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	38354983	38355455	-159940104	+	MLT1H	LTR	ERVL-MaLR	3	535	-14	2
chr3	38945651	38945652	chunk0122_416_1	5.12066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	38945582	38945971	-159349588	+	LTR16A1	LTR	ERVL	17	452	-4	2
chr3	38952765	38952766	chunk0122_417_1	6.48643	AR_DHT_Control	chr3	38952465	38952842	-159342717	-	L2b	LINE	L2	-1	3374	3011	2
chr3	39102067	39102068	chunk0122_423_1	29.6459	AR_DHT_Control	chr3	39102003	39102327	-159193232	-	Tigger3a	DNA	TcMar-Tigger	0	348	7	2
chr3	39208654	39208655	chunk0122_433_1	11.3143	AR_DHT_Control	chr3	39208414	39208984	-159086575	+	MER34A1	LTR	ERV1	1	562	-25	2
chr3	39275529	39275530	chunk0122_435_1	53.2345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	39275157	39275751	-159019808	+	MER67C	LTR	ERV1	109	711	0	2
chr3	39290954	39290955	chunk0122_436_1	28.3533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	39290950	39291052	-159004507	+	MER4C	LTR	ERV1	136	207	-258	2
chr3	39291542	39291543	chunk0122_438_1	43.14552	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	39291356	39291629	-159003930	+	MER4C	LTR	ERV1	208	465	0	2
chr3	39298149	39298150	chunk0122_440_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	39298069	39299495	-158996064	+	L1M2	LINE	L1	545	2003	-4846	2
chr3	39349193	39349194	chunk0122_442_1	17.99232	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	39348687	39352664	-158942895	+	HERV15-int	LTR	ERV1	4753	8734	-1	2
chr3	39448358	39448359	chunk0122_446_1	42.8755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	39448266	39448425	-158847134	-	Tigger3c	DNA	TcMar-Tigger	-1	601	447	2
chr3	39449054	39449055	chunk0122_447_1	6.69534	AR_DHT_Control	chr3	39448851	39449130	-158846429	-	Tigger3c	DNA	TcMar-Tigger	-156	446	153	2
chr3	39839733	39839734	chunk0122_452_1	221.0706	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	39839557	39842926	-158452633	-	L1PA7	LINE	L1	-3063	3398	1	2
chr3	39859167	39859168	chunk0122_456_1	23.53195	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	39857692	39860157	-158435402	+	L1MA9	LINE	L1	2019	4515	-1861	2
chr3	39861010	39861011	chunk0122_457_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	39860157	39862473	-158433086	+	L1PA15	LINE	L1	179	2746	-4039	2
chr3	39982060	39982061	chunk0122_464_1	5.61083	AR_DHT_Control	chr3	39982027	39982133	-158313426	+	MIRb	SINE	MIR	124	237	-31	2
chr3	39991602	39991603	chunk0122_467_1	8.27376	AR_DHT_Control	chr3	39991529	39991960	-158303599	+	L2a	LINE	L2	2949	3421	-5	2
chr3	40042832	40042833	chunk0123_1_1	16.97897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40042749	40043129	-158252430	-	MER47B	DNA	TcMar-Tigger	-1	417	4	2
chr3	40087668	40087669	chunk0123_4_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40087573	40087778	-158207781	-	MER63A	DNA	hAT-Blackjack	0	210	1	2
chr3	40114178	40114179	chunk0123_5_1	8.60744	AR_DHT_Control	chr3	40114118	40114459	-158181100	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	2
chr3	40119414	40119415	chunk0123_6_1	20.0996	AR_DHT_Control	chr3	40119318	40119551	-158176008	+	L1ME4b	LINE	L1	567	818	-74	2
chr3	40137775	40137776	chunk0123_7_1	90.1088	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40137692	40137795	-158157764	+	L2a	LINE	L2	3317	3420	-6	2
chr3	40263010	40263011	chunk0123_11_1	4.89269	AR_DHT_Control	chr3	40262922	40263247	-158032312	+	MER31B	LTR	ERV1	1	466	0	2
chr3	40263765	40263766	chunk0123_13_1	56.6129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40263669	40263767	-158031792	+	MER34B-int	LTR	ERV1	208	304	-5052	2
chr3	40264619	40264620	chunk0123_14_1	17.55394	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40264427	40265037	-158030522	+	MER101-int	LTR	ERV1	1427	2420	-2460	2
chr3	40355783	40355784	chunk0123_17_1	27.22544	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40355781	40355976	-157939583	-	L1ME3A	LINE	L1	-62	6111	5907	2
chr3	40468235	40468236	chunk0123_24_1	39.1711	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40468140	40468490	-157827069	-	L1ME3G	LINE	L1	-459	465	145	2
chr3	40631528	40631529	chunk0123_28_1	111.5611	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40630937	40635156	-157660403	+	L1PB1	LINE	L1	8	4562	-2300	2
chr3	40644336	40644337	chunk0123_30_1	11.1588	AR_DHT_Control	chr3	40644249	40644364	-157651195	+	MARNA	DNA	TcMar-Mariner	432	562	-24	2
chr3	40773610	40773611	chunk0123_37_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	40773610	40773843	-157521716	-	L1MB8	LINE	L1	-1	6177	5944	2
chr3	40774138	40774139	chunk0123_38_1	7.33982	AR_DHT_Control	chr3	40774105	40774268	-157521291	-	MIRb	SINE	MIR	-100	168	3	2
chr3	40887214	40887215	chunk0123_41_1	100.2153	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	40887188	40887332	-157408227	-	L2b	LINE	L2	0	3375	3229	2
chr3	40939359	40939360	chunk0123_45_1	58.80491	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	40939053	40939394	-157356165	+	L2a	LINE	L2	2970	3386	-40	2
chr3	40992893	40992894	chunk0123_46_1	42.2011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	40992477	40993149	-157302410	-	L1ME1	LINE	L1	-19	6160	5476	2
chr3	41098022	41098023	chunk0123_49_1	4.24079	AR_DHT_Control	chr3	41097447	41098060	-157197499	+	L2a	LINE	L2	2559	3182	-244	2
chr3	41188534	41188535	chunk0123_57_1	5.77762	AR_DHT_Control	chr3	41188451	41188924	-157106635	+	L1MC4a	LINE	L1	5486	5943	-1939	2
chr3	41217271	41217272	chunk0123_61_1	12.476	AR_DHT_Control	chr3	41216884	41217296	-157078263	+	L2a	LINE	L2	2695	3194	-232	2
chr3	41251431	41251432	chunk0123_66_1	74.3989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	41251348	41251720	-157043839	+	L1MEf	LINE	L1	24	471	-6076	2
chr3	41375734	41375735	chunk0123_70_1	9.87065	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	41370356	41376413	-156919146	+	L1PA7	LINE	L1	8	6097	-372	2
chr3	41533247	41533248	chunk0123_72_1	100.0612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	41532856	41533303	-156762256	+	MLT1H	LTR	ERVL-MaLR	1	561	-18	2
chr3	41562095	41562096	chunk0123_75_1	15.3744	AR_DHT_Control	chr3	41558876	41564433	-156731126	-	L1PA4	LINE	L1	-1	6154	591	2
chr3	41604904	41604905	chunk0123_76_1	13.5451	AR_DHT_Control	chr3	41604634	41605102	-156690457	+	LTR102_Mam	LTR	ERVL	338	851	0	2
chr3	41606870	41606871	chunk0123_78_1	31.938	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	41606297	41607148	-156688411	-	L1MA5	LINE	L1	-460	5840	4953	2
chr3	42123331	42123332	chunk0123_95_1	12.19678	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42123313	42123342	-156172217	+	(TTCC)n	Simple_repeat	Simple_repeat	1	29	0	2
chr3	42135237	42135238	chunk0123_98_1	5.62266	AR_DHT_Control	chr3	42135206	42135298	-156160261	+	L2b	LINE	L2	3246	3337	-38	2
chr3	42232419	42232420	chunk0123_105_1	17.52922	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42232320	42232785	-156062774	-	Charlie10	DNA	hAT-Charlie	-198	2624	2202	2
chr3	42236781	42236782	chunk0123_107_1	18.35994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42235394	42237268	-156058291	+	L1MA3	LINE	L1	3704	5599	-706	2
chr3	42328697	42328698	chunk0123_113_1	21.19091	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42328434	42328888	-155966671	-	MLT1C	LTR	ERVL-MaLR	-18	449	1	2
chr3	42424450	42424451	chunk0123_115_1	238.1939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	42424447	42424515	-155871044	-	L2a	LINE	L2	-1	3425	3321	2
chr3	42571770	42571771	chunk0123_128_1	7.22694	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42571723	42571832	-155723727	+	L1MD2	LINE	L1	9	125	-6508	2
chr3	42602317	42602318	chunk0123_132_1	46.66765	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	42602117	42602433	-155693126	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	2
chr3	42776025	42776026	chunk0123_134_1	13.71735	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	42775656	42776837	-155518722	-	L1MD2	LINE	L1	-293	6066	4852	2
chr3	42805342	42805343	chunk0123_140_1	4.79975	AR_DHT_Control	chr3	42804873	42805377	-155490182	-	PABL_B	LTR	ERV1	0	667	1	2
chr3	42825887	42825888	chunk0123_142_1	65.5811	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	42825616	42827233	-155468326	-	L1MB7	LINE	L1	-1897	4249	2636	2
chr3	42838643	42838644	chunk0123_144_1	54.1384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	42838046	42838852	-155456707	+	L1MD	LINE	L1	4999	5796	-383	2
chr3	42923787	42923788	chunk0123_148_1	12.87506	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	42923641	42923802	-155371757	-	LTR25-int	LTR	ERV1	-3389	3799	3752	2
chr3	42935152	42935153	chunk0123_149_1	6.89429	AR_DHT_Control	chr3	42934939	42935309	-155360250	-	L1MEc	LINE	L1	-6017	406	30	2
chr3	43465421	43465422	chunk0123_157_1	48.33123	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	43465205	43465469	-154830090	-	Tigger3c	DNA	TcMar-Tigger	-2	600	330	2
chr3	43475294	43475295	chunk0123_160_1	7.86105	AR_DHT_Control	chr3	43475072	43475301	-154820258	-	L1MC	LINE	L1	-1956	5926	5683	2
chr3	43480769	43480770	chunk0123_161_1	31.7155	AR_DHT_Control	chr3	43480603	43481071	-154814488	+	HAL1	LINE	L1	1732	2200	-307	2
chr3	43887647	43887648	chunk0123_169_1	19.59005	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	43887295	43888050	-154407509	-	HAL1	LINE	L1	0	2507	1684	2
chr3	44151178	44151179	chunk0123_176_1	61.7363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	44151031	44151416	-154144143	-	L1ME1	LINE	L1	-590	5987	5587	2
chr3	44293136	44293137	chunk0123_185_1	131.08042	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	44292982	44293959	-154001600	+	Tigger3b	DNA	TcMar-Tigger	1	1209	-22	2
chr3	44301680	44301681	chunk0123_186_1	8.27376	AR_DHT_Control	chr3	44301413	44302128	-153993431	-	L1MC4	LINE	L1	-2267	5683	4970	2
chr3	44353411	44353412	chunk0123_191_1	14.52938	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	44353220	44354722	-153940837	-	L1MC1	LINE	L1	-447	5886	4337	2
chr3	44386554	44386555	chunk0123_194_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	44386329	44387832	-153907727	+	MER52A	LTR	ERV1	1	1755	0	2
chr3	44466779	44466780	chunk0123_197_1	7.42302	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	44465943	44468257	-153827302	+	HUERS-P1-int	LTR	ERV1	3907	6260	-3	2
chr3	44501955	44501956	chunk0123_198_1	33.1062	AR_DHT_Control	chr3	44501594	44502311	-153793248	+	MLT1M	LTR	ERVL-MaLR	14	672	0	2
chr3	44607086	44607087	chunk0123_201_1	17.90016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	44606438	44608585	-153686974	+	L1MB2	LINE	L1	3492	5655	-519	2
chr3	44887023	44887024	chunk0123_208_1	8.55856	AR_DHT_Control	chr3	44886699	44887053	-153408506	-	L2c	LINE	L2	-2	3424	3032	2
chr3	44988596	44988597	chunk0123_211_1	6.84874	AR_DHT_Control	chr3	44988439	44988631	-153306928	-	MER58A	DNA	hAT-Charlie	-1	223	4	2
chr3	45202555	45202556	chunk0123_218_1	11.0019	AR_DHT_Control	chr3	45202306	45202576	-153092983	+	L1ME3A	LINE	L1	5078	5361	-785	2
chr3	45327202	45327203	chunk0123_223_1	29.93939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	45327085	45327847	-152967712	-	L1ME1	LINE	L1	-92	6072	5268	2
chr3	45418611	45418612	chunk0123_230_1	19.23896	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	45418533	45418748	-152876811	+	MER58A	DNA	hAT-Charlie	1	223	-1	2
chr3	45560964	45560965	chunk0123_236_1	6.22495	AR_DHT_Control	chr3	45560819	45561027	-152734532	+	MER58A	DNA	hAT-Charlie	2	218	-6	2
chr3	45692970	45692971	chunk0123_244_1	14.5768	AR_DHT_Control	chr3	45692911	45693259	-152602300	-	Tigger3a	DNA	TcMar-Tigger	-2	346	1	2
chr3	45847576	45847577	chunk0123_255_1	5.10203	AR_DHT_Control	chr3	45846420	45848998	-152446561	-	Tigger2	DNA	TcMar-Tigger	0	2718	1	2
chr3	45879710	45879711	chunk0123_258_1	5.62266	AR_DHT_Control	chr3	45878880	45879839	-152415720	+	L1MC1	LINE	L1	5357	6333	0	2
chr3	46004297	46004298	chunk0123_263_1	79.9437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	46003513	46004352	-152291207	+	MER50-int	LTR	ERV1	3147	3980	-2559	2
chr3	46036547	46036548	chunk0123_266_1	15.9202	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46035470	46038019	-152257540	+	LOR1-int	LTR	ERV1	1	2486	-5634	2
chr3	46056885	46056886	chunk0123_267_1	22.855	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46056786	46057126	-152238433	+	L1ME1	LINE	L1	5587	5921	-258	2
chr3	46108547	46108548	chunk0123_269_1	29.1195	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46108303	46108931	-152186628	+	MER67C	LTR	ERV1	1	711	0	2
chr3	46167270	46167271	chunk0123_271_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46164358	46168115	-152127444	-	L1PREC2	LINE	L1	-4	6683	2921	2
chr3	46196446	46196447	chunk0123_273_1	19.84535	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46196345	46197562	-152097997	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	2
chr3	46271485	46271486	chunk0123_279_1	21.024	AR_DHT_Control	chr3	46271363	46271581	-152023978	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr3	46442131	46442132	chunk0123_288_1	49.703	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46441988	46442342	-151853217	+	HAL1	LINE	L1	1949	2348	-159	2
chr3	46574669	46574670	chunk0123_292_1	15.06	AR_DHT_Control	chr3	46574658	46574847	-151720712	-	LTR90B	LTR	LTR	-492	304	95	2
chr3	46594153	46594154	chunk0123_294_1	29.9783	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	46593977	46594168	-151701391	+	L1PB	LINE	L1	4005	4206	-1940	2
chr3	46666720	46666721	chunk0123_297_1	112.4146	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	46666638	46666733	-151628826	-	MIRc	SINE	MIR	-126	142	46	2
chr3	47031356	47031357	chunk0123_305_1	17.0918	AR_DHT_Control	chr3	47030790	47031452	-151264107	+	L1MC1	LINE	L1	5681	6333	0	2
chr3	47033199	47033200	chunk0123_307_1	31.98542	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	47033190	47033357	-151262202	+	L2c	LINE	L2	3001	3199	-188	2
chr3	47076029	47076030	chunk0123_311_1	23.4468	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	47075986	47076053	-151219506	-	L2b	LINE	L2	-40	3335	3269	2
chr3	47455878	47455879	chunk0123_329_1	127.7204	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	47455620	47456126	-150839433	+	L1M5	LINE	L1	4456	4988	-1158	2
chr3	47617555	47617556	chunk0123_334_1	32.9424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	47617519	47617606	-150677953	-	MIRb	SINE	MIR	-15	253	166	2
chr3	47737343	47737344	chunk0123_337_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	47737110	47737425	-150558134	+	AluJr	SINE	Alu	1	309	-3	2
chr3	47757910	47757911	chunk0123_339_1	22.29925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	47757811	47758104	-150537455	+	L1MEd	LINE	L1	5516	5811	-362	2
chr3	47780608	47780609	chunk0123_343_1	6.35715	AR_DHT_Control	chr3	47780585	47780677	-150514882	-	L2a	LINE	L2	-1	3425	3341	2
chr3	47955379	47955380	chunk0123_345_1	6.48643	AR_DHT_Control	chr3	47954216	47955435	-150340124	+	ERVL-E-int	LTR	ERVL	1343	2649	-3018	2
chr3	47985597	47985598	chunk0123_347_1	88.4423	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	47985450	47986109	-150309450	+	L1MC4	LINE	L1	7326	8005	-37	2
chr3	48064683	48064684	chunk0123_352_1	30.33188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	48064636	48064884	-150230675	-	Tigger3c	DNA	TcMar-Tigger	0	602	349	2
chr3	48218774	48218775	chunk0123_358_1	21.3185	AR_DHT_Control	chr3	48218723	48218900	-150076659	-	MIRc	SINE	MIR	-23	245	48	2
chr3	48232378	48232379	chunk0123_359_1	141.2256	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	48232177	48232382	-150063177	+	HERVL40-int	LTR	ERVL	2110	2337	-3193	2
chr3	48236846	48236847	chunk0123_361_1	201.9731	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	48236745	48236934	-150058625	+	LTR75	LTR	ERVL	4	207	-355	2
chr3	48242656	48242657	chunk0123_363_1	47.6404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	48242605	48242782	-150052777	-	MER58B	DNA	hAT-Charlie	-9	332	152	2
chr3	48301013	48301014	chunk0123_365_1	4.12036	AR_DHT_Control	chr3	48300765	48301061	-149994498	+	AluSc	SINE	Alu	1	294	-15	2
chr3	48346089	48346090	chunk0123_368_1	22.46463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	48345837	48346267	-149949292	-	HERV16-int	LTR	ERVL	-2816	2838	2376	2
chr3	48624326	48624327	chunk0123_376_1	27.31306	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	48624248	48624356	-149671203	-	L2a	LINE	L2	-5	3421	3303	2
chr3	48774722	48774723	chunk0123_388_1	11.1716	AR_DHT_Control	chr3	48774513	48774815	-149520744	-	L1MA4A	LINE	L1	-236	6067	5761	2
chr3	48811696	48811697	chunk0123_390_1	109.15237	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	48811475	48811827	-149483732	+	L1MB5	LINE	L1	5806	6174	0	2
chr3	48827596	48827597	chunk0123_391_1	7.2534	AR_DHT_Control	chr3	48827473	48827862	-149467697	-	Tigger3b	DNA	TcMar-Tigger	-29	1202	708	2
chr3	48885940	48885941	chunk0123_394_1	335.8736	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	48885829	48886242	-149409317	+	HAL1	LINE	L1	1919	2300	-207	2
chr3	49183860	49183861	chunk0123_410_1	20.547	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	49183678	49184011	-149111548	+	L1MD1	LINE	L1	5598	5932	-427	2
chr3	49769886	49769887	chunk0123_423_1	26.68642	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	49769562	49769932	-148525627	+	MLT1F1	LTR	ERVL-MaLR	3	434	-114	2
chr3	49990262	49990263	chunk0123_425_1	7.91804	AR_DHT_Control	chr3	49990132	49990516	-148305043	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr3	50395215	50395216	chunk0123_438_1	21.3747	AR_DHT_Control	chr3	50395140	50395390	-147900169	-	MIR3	SINE	MIR	0	268	11	2
chr3	50606015	50606016	chunk0123_444_1	10.0817	AR_DHT_Control	chr3	50605892	50606085	-147689474	+	L2a	LINE	L2	2916	3112	-314	2
chr3	50720986	50720987	chunk0123_449_1	13.9359	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	50720131	50721886	-147573673	-	L1PA14	LINE	L1	0	6161	4457	2
chr3	50860352	50860353	chunk0123_450_1	7.08133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	50859515	50861350	-147434209	-	L1PA17	LINE	L1	-4453	3088	561	2
chr3	50963478	50963479	chunk0123_451_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	50963413	50963536	-147332023	+	L1M5	LINE	L1	3713	3848	-2298	2
chr3	51108510	51108511	chunk0123_453_1	7.36432	AR_DHT_Control	chr3	51108232	51109642	-147185917	+	L1PREC2	LINE	L1	2525	3974	-2875	2
chr3	51284753	51284754	chunk0123_455_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	51283298	51285647	-147009912	+	L1M3de	LINE	L1	2	1959	-4694	2
chr3	51356777	51356778	chunk0123_457_1	75.1191	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	51356625	51356791	-146938768	-	MIRb	SINE	MIR	-45	223	3	2
chr3	51448899	51448900	chunk0124_2_1	52.8977	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	51448738	51449198	-146846361	+	L1M2	LINE	L1	2549	3002	-3141	2
chr3	51487378	51487379	chunk0124_5_1	12.8609	AR_DHT_Control	chr3	51487270	51487632	-146807927	-	L1MD3	LINE	L1	-5	7990	7620	2
chr3	51652266	51652267	chunk0124_16_1	56.617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	51647858	51653935	-146641624	+	L1PA6	LINE	L1	37	6145	-9	2
chr3	51780579	51780580	chunk0124_18_1	5.82105	AR_DHT_Control	chr3	51780119	51780644	-146514915	+	Arthur1B	DNA	hAT-Tip100	287	846	-379	2
chr3	51926339	51926340	chunk0124_19_1	17.59175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	51925882	51926609	-146368950	+	L1ME1	LINE	L1	5589	6346	-251	2
chr3	51926945	51926946	chunk0124_21_1	20.61647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	51926926	51927305	-146368254	+	L1ME2	LINE	L1	5297	5693	-471	2
chr3	52103070	52103071	chunk0124_26_1	12.67881	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	52102676	52103244	-146192315	+	L1MCc	LINE	L1	5203	5814	-1127	2
chr3	52133381	52133382	chunk0124_30_1	5.40372	AR_DHT_Control	chr3	52133069	52133411	-146162148	+	MLT1A1	LTR	ERVL-MaLR	50	408	0	2
chr3	52216923	52216924	chunk0124_34_1	8.80746	AR_DHT_Control	chr3	52216870	52217002	-146078557	+	L2b	LINE	L2	3238	3374	-1	2
chr3	52262124	52262125	chunk0124_36_1	56.57441	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	52261704	52262411	-146033148	+	L1MB7	LINE	L1	5418	6168	-16	2
chr3	52332963	52332964	chunk0124_39_1	5.37069	AR_DHT_Control	chr3	52332867	52333184	-145962375	-	AluJo	SINE	Alu	-1	311	2	2
chr3	52334165	52334166	chunk0124_40_1	7.47918	AR_DHT_Control	chr3	52334017	52334493	-145961066	-	Tigger3	DNA	TcMar-Tigger	-1	3028	2541	2
chr3	52339800	52339801	chunk0124_41_1	7.48058	AR_DHT_Control	chr3	52339792	52339831	-145955728	+	(TG)n	Simple_repeat	Simple_repeat	1	39	0	2
chr3	52574117	52574118	chunk0124_47_1	26.79904	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	52574073	52574440	-145721119	-	MSTD	LTR	ERVL-MaLR	0	396	1	2
chr3	52811309	52811310	chunk0124_53_1	80.3733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	52811207	52811601	-145483958	+	L2c	LINE	L2	2926	3375	0	2
chr3	52830167	52830168	chunk0124_56_1	75.1662	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	52830145	52830334	-145465225	-	MIR	SINE	MIR	-37	225	38	2
chr3	52872270	52872271	chunk0124_62_1	40.57934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	52871968	52872329	-145423230	+	L2a	LINE	L2	3028	3426	0	2
chr3	52935345	52935346	chunk0124_63_1	10.7367	AR_DHT_Control	chr3	52935290	52935510	-145360049	+	MER58A	DNA	hAT-Charlie	4	224	0	2
chr3	52980288	52980289	chunk0124_64_1	7.06178	AR_DHT_Control	chr3	52979890	52980882	-145314677	+	Tigger2	DNA	TcMar-Tigger	1	995	-1723	2
chr3	52982876	52982877	chunk0124_65_1	10.4825	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	52982753	52983503	-145312056	+	Tigger2	DNA	TcMar-Tigger	1942	2717	-1	2
chr3	53134337	53134338	chunk0124_69_1	90.28026	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	53134248	53134411	-145161148	+	MER58B	DNA	hAT-Charlie	173	341	0	2
chr3	53302431	53302432	chunk0124_83_1	14.46376	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	53302385	53302438	-144993121	-	L2a	LINE	L2	-48	3378	3322	2
chr3	53523499	53523500	chunk0124_93_1	44.29058	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	53523453	53523534	-144772025	-	MIR3	SINE	MIR	-90	118	39	2
chr3	53537995	53537996	chunk0124_96_1	26.09076	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	53537255	53538132	-144757427	-	L1MC5	LINE	L1	-5	9299	8476	2
chr3	53614533	53614534	chunk0124_101_1	63.84667	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	53614121	53614701	-144680858	-	LTR41	LTR	ERVL	-131	637	1	2
chr3	53828865	53828866	chunk0124_103_1	43.00412	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	53828199	53829562	-144465997	+	L1MC1	LINE	L1	5725	7113	-15	2
chr3	53841479	53841480	chunk0124_107_1	23.41141	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	53841451	53841505	-144454054	-	AluYa8	SINE	Alu	-44	266	213	2
chr3	53932531	53932532	chunk0124_111_1	14.08593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	53932046	53932639	-144362920	-	L1MEf	LINE	L1	-2505	3641	2975	2
chr3	54211295	54211296	chunk0124_120_1	34.0357	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	54210965	54211551	-144084008	-	L1ME4b	LINE	L1	-1	891	287	2
chr3	54222493	54222494	chunk0124_122_1	29.5458	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	54222115	54222603	-144072956	-	MLT2B4	LTR	ERVL	0	559	1	2
chr3	54247691	54247692	chunk0124_124_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	54247341	54247845	-144047714	+	HAL1M8	LINE	L1	870	1364	-1627	2
chr3	54341911	54341912	chunk0124_128_1	51.6112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	54341899	54342110	-143953449	-	MIR	SINE	MIR	0	262	49	2
chr3	54354123	54354124	chunk0124_131_1	16.88338	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	54354030	54354134	-143941425	-	L3	LINE	CR1	-314	3785	3670	2
chr3	54393755	54393756	chunk0124_136_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	54392911	54394317	-143901242	+	L1MA6	LINE	L1	399	1890	-5676	2
chr3	54527755	54527756	chunk0124_138_1	28.51559	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	54526990	54528044	-143767515	-	L1MB8	LINE	L1	-5795	1072	10	2
chr3	54717644	54717645	chunk0124_145_1	8.82835	AR_DHT_Control	chr3	54717504	54717898	-143577661	+	(TG)n	Simple_repeat	Simple_repeat	1	412	0	2
chr3	54736603	54736604	chunk0124_146_1	60.20724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	54736170	54736696	-143558863	-	L1ME4a	LINE	L1	-195	5929	5357	2
chr3	54762404	54762405	chunk0124_150_1	7.14391	AR_DHT_Control	chr3	54762211	54762600	-143532959	+	L2b	LINE	L2	2942	3382	-5	2
chr3	55010142	55010143	chunk0124_160_1	10.2986	AR_DHT_Control	chr3	55009885	55010146	-143285413	+	MIRb	SINE	MIR	4	259	-9	2
chr3	55022753	55022754	chunk0124_161_1	17.2171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	55022657	55022959	-143272600	-	L1MEd	LINE	L1	-5043	2060	1728	2
chr3	55217144	55217145	chunk0124_165_1	12.1886	AR_DHT_Control	chr3	55216811	55222187	-143073372	-	L1MA7	LINE	L1	-125	6557	1004	2
chr3	55355256	55355257	chunk0124_173_1	8.84892	AR_DHT_Control	chr3	55355167	55356856	-142938703	-	L1MB3	LINE	L1	-184	5999	4272	2
chr3	55380714	55380715	chunk0124_175_1	130.1357	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	55379852	55381041	-142914518	+	L1ME3E	LINE	L1	2656	3932	-2214	2
chr3	55397422	55397423	chunk0124_176_1	6.38514	AR_DHT_Control	chr3	55397087	55398246	-142897313	-	L2a	LINE	L2	0	3426	2139	2
chr3	55403091	55403092	chunk0124_177_1	17.6756	AR_DHT_Control	chr3	55402773	55403489	-142892070	-	LTR82A	LTR	ERVL	-1	871	91	2
chr3	55417477	55417478	chunk0124_178_1	93.919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	55417468	55417571	-142877988	-	MER113	DNA	hAT-Charlie	-118	403	300	2
chr3	55424036	55424037	chunk0124_179_1	5.43586	AR_DHT_Control	chr3	55423984	55424105	-142871454	-	L2c	LINE	L2	-5	3382	3269	2
chr3	55436717	55436718	chunk0124_181_1	84.4698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	55436581	55436729	-142858830	-	L1ME4a	LINE	L1	-744	5498	5329	2
chr3	55449715	55449716	chunk0124_183_1	40.009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	55449689	55449877	-142845682	-	MIRb	SINE	MIR	-7	255	31	2
chr3	55782594	55782595	chunk0124_202_1	177.6995	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	55782540	55782630	-142512929	-	L2a	LINE	L2	0	3426	3332	2
chr3	55790976	55790977	chunk0124_204_1	20.58471	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	55790873	55791026	-142504533	+	MIRb	SINE	MIR	3	152	-116	2
chr3	56048290	56048291	chunk0124_210_1	11.8854	AR_DHT_Control	chr3	56048262	56048415	-142247144	-	MIRc	SINE	MIR	-33	229	22	2
chr3	56060042	56060043	chunk0124_212_1	17.49259	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	56059716	56060118	-142235441	+	LTR37A	LTR	ERV1	8	420	-6	2
chr3	56077921	56077922	chunk0124_214_1	19.72725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	56077802	56078002	-142217557	+	MIRb	SINE	MIR	87	268	0	2
chr3	56109677	56109678	chunk0124_216_1	9.13774	AR_DHT_Control	chr3	56109557	56109694	-142185865	+	L1ME4b	LINE	L1	509	649	-243	2
chr3	56141388	56141389	chunk0124_217_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	56141177	56141518	-142154041	+	MLT1G	LTR	ERVL-MaLR	23	339	-240	2
chr3	56209320	56209321	chunk0124_219_1	6.94032	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	56209111	56209586	-142085973	+	L2a	LINE	L2	2925	3425	-1	2
chr3	56607565	56607566	chunk0124_228_1	37.5973	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	56606748	56612100	-141683459	-	L1PBa1	LINE	L1	-1100	5762	251	2
chr3	56684255	56684256	chunk0124_235_1	32.47	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	56684245	56684356	-141611203	-	MIR	SINE	MIR	-4	258	153	2
chr3	56711680	56711681	chunk0124_237_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	56710939	56712206	-141583353	-	L1MDb	LINE	L1	-5066	1343	7	2
chr3	56721000	56721001	chunk0124_239_1	22.2165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	56720651	56721413	-141574146	-	L1MEc	LINE	L1	-5325	1075	255	2
chr3	56813181	56813182	chunk0124_246_1	15.84732	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	56813101	56813208	-141482351	-	AmnSINE2	SINE	tRNA-Deu	-17	341	245	2
chr3	56858561	56858562	chunk0124_251_1	147.146	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	56858451	56858720	-141436839	-	L2a	LINE	L2	-22	3404	3076	2
chr3	56990777	56990778	chunk0124_259_1	59.16489	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	56990735	56990859	-141304700	-	MIR	SINE	MIR	-66	142	3	2
chr3	57015077	57015078	chunk0124_260_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	57015068	57015205	-141280354	+	MER58A	DNA	hAT-Charlie	1	144	-80	2
chr3	57205555	57205556	chunk0124_264_1	25.5624	AR_DHT_Control	chr3	57205414	57205908	-141089651	+	L2a	LINE	L2	2849	3383	-43	2
chr3	57217069	57217070	chunk0124_266_1	98.1424	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	57216625	57217466	-141078093	-	L1MC4	LINE	L1	-530	7512	6405	2
chr3	57355213	57355214	chunk0124_269_1	37.8237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	57354565	57355215	-140940344	+	L1MD1	LINE	L1	5593	6242	0	2
chr3	57412807	57412808	chunk0124_270_1	8.8907	AR_DHT_Control	chr3	57412229	57413582	-140881977	+	L1MC1	LINE	L1	4916	6287	-46	2
chr3	57484835	57484836	chunk0124_271_1	47.8321	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	57484410	57485404	-140810155	+	L1PB2	LINE	L1	4847	5869	-282	2
chr3	57555622	57555623	chunk0124_280_1	5.25527	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	57555574	57555742	-140739817	+	MIRb	SINE	MIR	58	255	-13	2
chr3	57605150	57605151	chunk0124_286_1	7.36432	AR_DHT_Control	chr3	57604952	57606780	-140688779	+	L1MEc	LINE	L1	1280	3358	-4303	2
chr3	57697075	57697076	chunk0124_288_1	6.3126	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	57696747	57697171	-140598388	-	CR1-3_Croc	LINE	CR1	-766	2839	2403	2
chr3	57742804	57742805	chunk0124_292_1	13.41565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	57742627	57742837	-140552722	-	L1ME4a	LINE	L1	-351	5773	5565	2
chr3	57779070	57779071	chunk0124_296_1	15.98521	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	57778854	57779222	-140516337	+	L1ME3E	LINE	L1	5547	5937	-305	2
chr3	58136316	58136317	chunk0124_323_1	36.8712	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	58136192	58136456	-140159103	+	MIRb	SINE	MIR	26	267	-1	2
chr3	58144918	58144919	chunk0124_325_1	30.9711	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	58144462	58145028	-140150531	-	L1ME4b	LINE	L1	-346	546	1	2
chr3	58181456	58181457	chunk0124_329_1	33.393	AR_DHT_Control	chr3	58181401	58181509	-140114050	-	L2a	LINE	L2	-2	3424	3320	2
chr3	58272301	58272302	chunk0124_336_1	12.8082	AR_DHT_Control	chr3	58272222	58272327	-140023232	-	MIR	SINE	MIR	-114	148	23	2
chr3	58361611	58361612	chunk0124_342_1	38.4555	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	58361319	58362196	-139933363	-	L1MD1	LINE	L1	-62	6180	5288	2
chr3	58372229	58372230	chunk0124_344_1	10.0841	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	58372076	58372278	-139923281	+	L1ME4a	LINE	L1	5872	6089	-35	2
chr3	58387804	58387805	chunk0124_345_1	6.84874	AR_DHT_Control	chr3	58387758	58387821	-139907738	+	GA-rich	Low_complexity	Low_complexity	1	64	0	2
chr3	58452389	58452390	chunk0124_348_1	49.7348	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	58451324	58452661	-139842898	-	Tigger2	DNA	TcMar-Tigger	-183	2535	1148	2
chr3	58646802	58646803	chunk0124_355_1	38.92663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	58646728	58646827	-139648732	-	MIRb	SINE	MIR	-2	266	169	2
chr3	58684415	58684416	chunk0124_358_1	5.08049	AR_DHT_Control	chr3	58684246	58684455	-139611104	+	LTR89	LTR	ERVL?	271	504	-375	2
chr3	58778457	58778458	chunk0124_361_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	58777680	58779290	-139516269	+	L1MA4A	LINE	L1	916	2627	-4939	2
chr3	58918801	58918802	chunk0124_362_1	30.09342	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	58918715	58918940	-139376619	+	MIR	SINE	MIR	20	251	-11	2
chr3	59112351	59112352	chunk0124_364_1	13.53111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	59111576	59112675	-139182884	+	L1MC5	LINE	L1	7311	8395	-909	2
chr3	59194117	59194118	chunk0124_366_1	50.2962	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	59193986	59194240	-139101319	-	L1M5	LINE	L1	-305	5819	5556	2
chr3	59244058	59244059	chunk0124_367_1	6.44773	AR_DHT_Control	chr3	59243611	59244211	-139051348	+	L2a	LINE	L2	2758	3426	0	2
chr3	59249397	59249398	chunk0124_369_1	37.1391	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	59249367	59249496	-139046063	+	MER58A	DNA	hAT-Charlie	5	143	-81	2
chr3	59574161	59574162	chunk0124_381_1	17.6437	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	59573771	59574309	-138721250	-	MER44B	DNA	TcMar-Tigger	0	550	1	2
chr3	59740099	59740100	chunk0124_397_1	55.3804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	59739860	59741007	-138554552	-	L1ME3B	LINE	L1	-1837	5025	3754	2
chr3	59896157	59896158	chunk0124_402_1	10.20418	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	59895854	59896274	-138399285	+	L2a	LINE	L2	2965	3426	0	2
chr3	60363746	60363747	chunk0124_407_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	60363655	60364153	-137931406	+	LTR33	LTR	ERVL	1	507	-8	2
chr3	60743434	60743435	chunk0124_414_1	27.86141	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	60743365	60743474	-137552085	-	L2a	LINE	L2	-16	3410	3302	2
chr3	60954909	60954910	chunk0124_416_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	60954777	60954939	-137340620	-	MER117	DNA	hAT-Charlie	-1	196	33	2
chr3	61155910	61155911	chunk0124_424_1	57.1377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	61155799	61156304	-137139255	+	MER68	LTR	ERVL	50	563	0	2
chr3	61183589	61183590	chunk0124_426_1	40.9193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	61183531	61183675	-137111884	+	MIRb	SINE	MIR	81	222	-46	2
chr3	61232866	61232867	chunk0124_433_1	274.8247	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	61232818	61232888	-137062671	+	L1ME4b	LINE	L1	5754	5826	-417	2
chr3	61239943	61239944	chunk0124_434_1	14.5778	AR_DHT_Control	chr3	61239860	61239946	-137055613	+	MER5A1	DNA	hAT-Charlie	2	86	-80	2
chr3	61288083	61288084	chunk0124_437_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	61287875	61288362	-137007197	+	MLT1H1	LTR	ERVL-MaLR	12	547	-8	2
chr3	61348988	61348989	chunk0124_439_1	27.27007	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	61348606	61349085	-136946474	-	LTR33	LTR	ERVL	-4	511	1	2
chr3	61462511	61462512	chunk0124_444_1	6.06878	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	61462501	61462564	-136832995	+	MIR	SINE	MIR	88	150	-112	2
chr3	61531778	61531779	chunk0124_445_1	5.08049	AR_DHT_Control	chr3	61531012	61531888	-136763671	+	LTR102_Mam	LTR	ERVL	1	851	0	2
chr3	61547835	61547836	chunk0124_447_1	14.37256	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	61547726	61548276	-136747283	-	L1ME1	LINE	L1	-355	5824	5278	2
chr3	61615759	61615760	chunk0124_455_1	24.9628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	61615665	61615950	-136679609	-	L1MC4	LINE	L1	-975	7067	6802	2
chr3	61978725	61978726	chunk0125_16_1	45.9438	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	61978692	61978872	-136316687	-	MER58A	DNA	hAT-Charlie	-4	220	10	2
chr3	62007551	62007552	chunk0125_18_1	34.18767	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	62007549	62007872	-136287687	-	L2c	LINE	L2	-11	3376	2985	2
chr3	62144051	62144052	chunk0125_23_1	66.7332	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	62143987	62144206	-136151353	+	MER58A	DNA	hAT-Charlie	1	221	-3	2
chr3	62290309	62290310	chunk0125_30_1	5.9324	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	62289441	62291364	-136004195	+	L1ME3G	LINE	L1	14	399	-525	2
chr3	62568428	62568429	chunk0125_36_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	62568194	62568775	-135726784	+	MLT2B3	LTR	ERVL	1	554	0	2
chr3	63815536	63815537	chunk0125_42_1	6.73207	AR_DHT_Control	chr3	63815483	63815744	-134479815	+	L2b	LINE	L2	2955	3228	-198	2
chr3	63821786	63821787	chunk0125_43_1	7.19831	AR_DHT_Control	chr3	63821443	63821967	-134473592	+	L1MD1	LINE	L1	5637	6180	-62	2
chr3	63880849	63880850	chunk0125_44_1	15.6041	AR_DHT_Control	chr3	63880536	63880938	-134414621	+	L2c	LINE	L2	2989	3412	-14	2
chr3	63975920	63975921	chunk0125_53_1	86.8673	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	63975882	63975949	-134319610	+	(TGTC)n	Simple_repeat	Simple_repeat	1	68	0	2
chr3	64072309	64072310	chunk0125_58_1	90.1443	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	64072019	64072648	-134222911	+	L2a	LINE	L2	2743	3422	-4	2
chr3	64514779	64514780	chunk0125_74_1	7.38582	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	64514700	64514816	-133780743	-	MIRc	SINE	MIR	-83	185	48	2
chr3	64764599	64764600	chunk0125_81_1	25.859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	64764490	64764694	-133530865	+	MIRb	SINE	MIR	26	230	-38	2
chr3	64964326	64964327	chunk0125_88_1	15.3744	AR_DHT_Control	chr3	64964064	64964365	-133331194	-	AluSx1	SINE	Alu	-7	305	1	2
chr3	65022414	65022415	chunk0125_89_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	65022407	65022479	-133273080	-	MIRb	SINE	MIR	-16	252	185	2
chr3	65323601	65323602	chunk0125_93_1	13.5451	AR_DHT_Control	chr3	65323546	65323624	-132971935	+	MIRc	SINE	MIR	83	164	-104	2
chr3	65348953	65348954	chunk0125_95_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	65348853	65348971	-132946588	-	L2a	LINE	L2	-18	3408	3300	2
chr3	65632619	65632620	chunk0125_111_1	135.4424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	65632596	65632802	-132662757	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr3	65660386	65660387	chunk0125_112_1	17.3576	AR_DHT_Control	chr3	65660199	65660447	-132635112	-	L2b	LINE	L2	0	3375	3139	2
chr3	65714312	65714313	chunk0125_116_1	8.41215	AR_DHT_Control	chr3	65714221	65714664	-132580895	+	LTR40c	LTR	ERVL	1	465	0	2
chr3	65999147	65999148	chunk0125_136_1	11.1005	AR_DHT_Control	chr3	65999075	65999262	-132296297	-	L1PA10	LINE	L1	-12	6156	5970	2
chr3	66065288	66065289	chunk0125_142_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	66065253	66065377	-132230182	-	MIRb	SINE	MIR	-125	143	1	2
chr3	66133243	66133244	chunk0125_143_1	10.1791	AR_DHT_Control	chr3	66133142	66133602	-132161957	+	Tigger3c	DNA	TcMar-Tigger	142	602	0	2
chr3	66272177	66272178	chunk0125_146_1	74.3644	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	66272101	66272311	-132023248	-	MIRb	SINE	MIR	-14	254	1	2
chr3	66460695	66460696	chunk0125_155_1	7.59394	AR_DHT_Control	chr3	66460393	66460746	-131834813	+	MLT1B	LTR	ERVL-MaLR	5	390	0	2
chr3	66572305	66572306	chunk0125_165_1	275.2306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	66572280	66572586	-131722973	-	L2c	LINE	L2	-7	3380	3056	2
chr3	66594143	66594144	chunk0125_170_1	22.81096	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	66594105	66594828	-131700731	+	L1ME2z	LINE	L1	5714	6414	-30	2
chr3	66607077	66607078	chunk0125_175_1	22.5804	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	66606933	66607434	-131688125	+	MLT1H	LTR	ERVL-MaLR	1	547	-2	2
chr3	66626157	66626158	chunk0125_179_1	141.5713	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	66625994	66626238	-131669321	+	L2b	LINE	L2	3142	3374	-1	2
chr3	66845518	66845519	chunk0125_197_1	38.0726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	66842801	66848943	-131446616	+	L1PA3	LINE	L1	5	6152	-3	2
chr3	67039080	67039081	chunk0125_201_1	11.872	AR_DHT_Control	chr3	67038848	67039262	-131256297	-	HERVH-int	LTR	ERV1	-1697	6016	5590	2
chr3	67202393	67202394	chunk0125_203_1	20.83822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	67202377	67202531	-131093028	+	L3	LINE	CR1	2776	2937	-1162	2
chr3	67487893	67487894	chunk0125_210_1	16.4426	AR_DHT_Control	chr3	67487766	67488114	-130807445	+	L1ME4c	LINE	L1	5574	5823	-301	2
chr3	67516729	67516730	chunk0125_211_1	19.99954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	67516609	67516809	-130778750	-	L2a	LINE	L2	-2	3424	3198	2
chr3	67563571	67563572	chunk0125_215_1	13.463	AR_DHT_Control	chr3	67563443	67563597	-130731962	+	L1ME3G	LINE	L1	502	666	-258	2
chr3	67687327	67687328	chunk0125_218_1	5.95209	AR_DHT_Control	chr3	67687273	67687492	-130608067	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr3	67691755	67691756	chunk0125_219_1	40.673	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	67691587	67691759	-130603800	-	L2a	LINE	L2	-287	3139	2959	2
chr3	67910465	67910466	chunk0125_225_1	22.05268	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	67910135	67911202	-130384357	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1068	0	2
chr3	67992473	67992474	chunk0125_228_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	67992460	67992542	-130303017	+	L2c	LINE	L2	3208	3310	-77	2
chr3	68215842	68215843	chunk0125_231_1	12.8023	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	68215383	68216542	-130079017	+	L1MC3	LINE	L1	5024	6383	-1402	2
chr3	68248591	68248592	chunk0125_233_1	12.82388	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	68248551	68249101	-130046458	+	LTR32	LTR	ERVL	1	457	0	2
chr3	68483269	68483270	chunk0125_238_1	112.38195	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	68483242	68483372	-129812187	-	MER58B	DNA	hAT-Charlie	0	341	206	2
chr3	68556336	68556337	chunk0125_242_1	13.51272	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	68556130	68556362	-129739197	-	MER20B	DNA	hAT-Charlie	0	783	532	2
chr3	68936981	68936982	chunk0125_247_1	305.1411	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	68936757	68937171	-129358388	+	UCON6	Unknown	Unknown	33	434	-3	2
chr3	69172237	69172238	chunk0125_258_1	27.36792	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	69172076	69172541	-129123018	+	LTR37B	LTR	ERV1	1	468	0	2
chr3	69186786	69186787	chunk0125_261_1	28.1863	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	69186710	69186838	-129108721	-	AluJo	SINE	Alu	-185	127	1	2
chr3	69203675	69203676	chunk0125_263_1	15.63344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	69203536	69203795	-129091764	+	MIRb	SINE	MIR	6	265	-3	2
chr3	69204732	69204733	chunk0125_265_1	15.8148	AR_DHT_Control	chr3	69204675	69204768	-129090791	-	L2c	LINE	L2	-64	3323	3206	2
chr3	69271317	69271318	chunk0125_268_1	35.111	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	69271293	69271331	-129024228	-	X6A_LINE	LINE	CR1	-63	1017	981	2
chr3	69432327	69432328	chunk0125_277_1	10.88124	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	69431830	69432417	-128863142	+	Tigger8	DNA	TcMar-Tigger	4	621	-46	2
chr3	69634094	69634095	chunk0125_282_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	69631368	69637484	-128658075	-	L1PA6	LINE	L1	-1	6153	5	2
chr3	69723533	69723534	chunk0125_283_1	7.72091	AR_DHT_Control	chr3	69723241	69723584	-128571975	-	MLT1I	LTR	ERVL-MaLR	-54	357	10	2
chr3	69833833	69833834	chunk0125_288_1	10.12	AR_DHT_Control	chr3	69833823	69833982	-128461577	+	L2a	LINE	L2	3219	3412	-14	2
chr3	69930427	69930428	chunk0125_291_1	5.25527	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	69930410	69930583	-128364976	+	L2a	LINE	L2	2992	3182	-244	2
chr3	70723325	70723326	chunk0125_308_1	39.1578	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	70723224	70723434	-127572125	+	MER58A	DNA	hAT-Charlie	5	223	-1	2
chr3	70746098	70746099	chunk0125_310_1	17.11259	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	70746068	70746353	-127549206	+	L1ME4b	LINE	L1	259	519	-373	2
chr3	70797160	70797161	chunk0125_313_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	70797023	70797658	-127497901	-	L1MDa	LINE	L1	-5625	1008	122	2
chr3	71035542	71035543	chunk0125_333_1	9.20019	AR_DHT_Control	chr3	71035358	71035577	-127259982	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr3	71365080	71365081	chunk0125_358_1	49.0534	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	71364930	71365110	-126930449	-	MER58A	DNA	hAT-Charlie	-1	223	30	2
chr3	71395605	71395606	chunk0125_367_1	165.61627	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr3	71395341	71395766	-126899793	+	L2a	LINE	L2	2974	3426	0	2
chr3	71561002	71561003	chunk0125_378_1	11.582	AR_DHT_Control	chr3	71560398	71561053	-126734506	+	L1MB7	LINE	L1	5487	6113	-71	2
chr3	71601709	71601710	chunk0125_380_1	7.69414	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	71601443	71601873	-126693686	-	LTR16B2	LTR	ERVL	0	462	2	2
chr3	71611216	71611217	chunk0125_381_1	6.15224	AR_DHT_Control	chr3	71610955	71611309	-126684250	-	MER102b	DNA	hAT-Charlie	-4	327	1	2
chr3	71902999	71903000	chunk0125_394_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	71902909	71903016	-126392543	-	L2a	LINE	L2	-10	3416	3294	2
chr3	71902999	71903000	chunk0125_394_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	71902994	71903200	-126392359	-	MIR	SINE	MIR	-21	241	13	2
chr3	71978419	71978420	chunk0125_396_1	12.57577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	71978399	71978578	-126316981	-	MIR	SINE	MIR	-21	247	58	2
chr3	72028177	72028178	chunk0125_401_1	7.36432	AR_DHT_Control	chr3	72028114	72028494	-126267065	+	HERVH-int	LTR	ERV1	7322	7713	0	2
chr3	72230191	72230192	chunk0125_406_1	11.4392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	72230125	72230292	-126065267	+	MER58A	DNA	hAT-Charlie	42	222	-2	2
chr3	72266500	72266501	chunk0125_407_1	9.39801	AR_DHT_Control	chr3	72266230	72266819	-126028740	+	HAL1	LINE	L1	43	638	-1869	2
chr3	72274682	72274683	chunk0125_408_1	5.30168	AR_DHT_Control	chr3	72274598	72274800	-126020759	-	MER58A	DNA	hAT-Charlie	-3	221	23	2
chr3	72298462	72298463	chunk0125_410_1	252.8144	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	72298276	72298568	-125996991	-	MamGypLTR3a	LTR	Gypsy	-411	570	289	2
chr3	72558118	72558119	chunk0125_430_1	8.21385	AR_DHT_Control	chr3	72557725	72558236	-125737323	-	LTR10A	LTR	ERV1	-64	545	1	2
chr3	72582661	72582662	chunk0125_431_1	15.6772	AR_DHT_Control	chr3	72582271	72582745	-125712814	-	MER90a	LTR	ERV1	0	614	91	2
chr3	72658246	72658247	chunk0125_433_1	31.593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	72658215	72658443	-125637116	-	MIRb	SINE	MIR	-12	256	13	2
chr3	72688963	72688964	chunk0125_435_1	7.37742	AR_DHT_Control	chr3	72688929	72689076	-125606483	-	L1ME3G	LINE	L1	-299	625	475	2
chr3	72743794	72743795	chunk0125_438_1	29.6308	AR_DHT_Control	chr3	72743695	72744034	-125551525	-	L2c	LINE	L2	-5	3382	3032	2
chr3	72763674	72763675	chunk0125_441_1	119.0684	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	72763480	72763928	-125531631	+	MLT1C	LTR	ERVL-MaLR	4	467	0	2
chr3	73575766	73575767	chunk0126_23_1	13.6098	AR_DHT_Control	chr3	73575690	73575837	-124719722	+	MIR3	SINE	MIR	43	201	-7	2
chr3	73607353	73607354	chunk0126_26_1	31.3076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	73607343	73607577	-124687982	+	L2b	LINE	L2	3080	3343	-44	2
chr3	73673399	73673400	chunk0126_28_1	11.1735	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	73673354	73673533	-124622026	-	L2c	LINE	L2	0	3387	3210	2
chr3	73724538	73724539	chunk0126_32_1	38.3277	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	73724303	73724557	-124571002	-	Tigger3a	DNA	TcMar-Tigger	0	348	90	2
chr3	73725810	73725811	chunk0126_34_1	8.89296	AR_DHT_Control	chr3	73725745	73725872	-124569687	+	MER20	DNA	hAT-Charlie	95	213	-6	2
chr3	73748759	73748760	chunk0126_38_1	29.91144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	73748579	73748795	-124546764	+	MIRb	SINE	MIR	30	261	-1	2
chr3	74019602	74019603	chunk0126_48_1	47.36206	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	74019428	74019863	-124275696	+	L2a	LINE	L2	2990	3416	-10	2
chr3	74119010	74119011	chunk0126_50_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74118990	74119083	-124176476	-	MER102c	DNA	hAT-Charlie	-251	80	2	2
chr3	74340086	74340087	chunk0126_56_1	8.20766	AR_DHT_Control	chr3	74339943	74340209	-123955350	+	MER2	DNA	TcMar-Tigger	5	286	-59	2
chr3	74349241	74349242	chunk0126_60_1	94.0615	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74349206	74349512	-123946047	-	L2c	LINE	L2	-43	3344	3019	2
chr3	74393570	74393571	chunk0126_62_1	10.6083	AR_DHT_Control	chr3	74393507	74393735	-123901824	-	L2b	LINE	L2	-221	3154	2918	2
chr3	74409228	74409229	chunk0126_64_1	75.24883	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	74409100	74409523	-123886036	+	MER57D	LTR	ERV1	1	407	-4	2
chr3	74448625	74448626	chunk0126_65_1	16.3825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74448543	74448688	-123846871	+	MIR	SINE	MIR	68	218	-44	2
chr3	74611363	74611364	chunk0126_72_1	34.6061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	74611281	74611495	-123684064	+	MER131	DNA?	DNA?	6	215	0	2
chr3	74663606	74663607	chunk0126_78_1	19.32961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74663220	74663873	-123631686	+	L1MD3	LINE	L1	7310	7989	-6	2
chr3	74717471	74717472	chunk0126_83_1	6.84874	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74717039	74718013	-123577546	-	L1ME1	LINE	L1	-1902	4419	3451	2
chr3	74718882	74718883	chunk0126_84_1	20.49712	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	74718658	74719272	-123576287	-	L1MB7	LINE	L1	-3171	3473	3280	2
chr3	74738775	74738776	chunk0126_87_1	14.06429	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	74738693	74739098	-123556461	-	L1ME2	LINE	L1	-1	6163	5721	2
chr3	74740629	74740630	chunk0126_88_1	13.0642	AR_DHT_Control	chr3	74740291	74740732	-123554827	-	L1M4	LINE	L1	-878	5268	4764	2
chr3	74780825	74780826	chunk0126_90_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74780697	74780915	-123514644	-	MER58A	DNA	hAT-Charlie	-1	223	2	2
chr3	74832396	74832397	chunk0126_92_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	74832029	74832425	-123463134	+	LTR16A1	LTR	ERVL	1	456	0	2
chr3	74870071	74870072	chunk0126_95_1	36.2782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	74869883	74870200	-123425359	-	L1ME3B	LINE	L1	-12	6230	5931	2
chr3	74911979	74911980	chunk0126_100_1	53.9584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	74911590	74912436	-123383123	+	L1ME3Cz	LINE	L1	428	897	-100	2
chr3	74954552	74954553	chunk0126_102_1	21.09869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	74954496	74954588	-123340971	+	MLT1M	LTR	ERVL-MaLR	21	122	-550	2
chr3	75021484	75021485	chunk0126_103_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	75021071	75021509	-123274050	-	L1ME4a	LINE	L1	-210	5914	5458	2
chr3	75043331	75043332	chunk0126_104_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75039552	75043512	-123252047	-	L1PA8A	LINE	L1	-1813	5102	1134	2
chr3	75099995	75099996	chunk0126_107_1	26.92866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	75098568	75100755	-123194804	-	L1MA3	LINE	L1	-7	7717	5495	2
chr3	75101989	75101990	chunk0126_109_1	7.82111	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75101235	75102410	-123193149	-	L1MA3	LINE	L1	-6283	1282	9	2
chr3	75649085	75649086	chunk0126_116_1	12.76394	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75648390	75649756	-122645803	-	BSR/Beta	Satellite	Satellite	-2	1346	1	2
chr3	75684197	75684198	chunk0126_120_1	11.0019	AR_DHT_Control	chr3	75684152	75684205	-122611354	+	(CAGGC)n	Simple_repeat	Simple_repeat	1	55	0	2
chr3	75718022	75718023	chunk0126_122_1	18.09514	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75717900	75718215	-122577344	-	LTR16C	LTR	ERVL	-1	488	177	2
chr3	75749515	75749516	chunk0126_123_1	5.62266	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75748909	75754101	-122541458	+	CER	Satellite	Satellite	1	5208	0	2
chr3	75772548	75772549	chunk0126_124_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	75771602	75772849	-122522710	+	MER52A	LTR	ERV1	1	1755	0	2
chr3	75841993	75841994	chunk0126_129_1	17.93088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	75841756	75842115	-122453444	-	MER20B	DNA	hAT-Charlie	0	783	394	2
chr3	76364477	76364478	chunk0126_140_1	14.915	AR_DHT_Control	chr3	76363933	76364507	-121931052	+	L2a	LINE	L2	2783	3421	-5	2
chr3	76418684	76418685	chunk0126_141_1	6.88185	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	76418537	76418686	-121876873	+	MER57F	LTR	ERV1	265	429	-6	2
chr3	76550896	76550897	chunk0126_146_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	76550423	76552080	-121743479	+	MER52A	LTR	ERV1	1	1755	0	2
chr3	76781354	76781355	chunk0126_152_1	8.24382	AR_DHT_Control	chr3	76779174	76782122	-121513437	-	L1MA10	LINE	L1	-16	6904	3971	2
chr3	76954887	76954888	chunk0126_155_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	76954883	76955636	-121339923	-	L1MB4	LINE	L1	-41	6139	5369	2
chr3	77635690	77635691	chunk0126_158_1	7.74912	AR_DHT_Control	chr3	77635540	77635854	-120659705	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	2
chr3	77689076	77689077	chunk0126_159_1	23.0152	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	77689033	77689532	-120606027	+	MER34B	LTR	ERV1	1	565	0	2
chr3	77703515	77703516	chunk0126_166_1	6.6351	AR_DHT_Control	chr3	77703229	77703533	-120592026	-	MER39	LTR	ERV1	0	707	393	2
chr3	77917605	77917606	chunk0126_169_1	17.64152	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	77917207	77917803	-120377756	+	LTR24C	LTR	ERV1	3	635	0	2
chr3	78022390	78022391	chunk0126_173_1	49.54268	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	78022342	78022405	-120273154	+	(TCTGTG)n	Simple_repeat	Simple_repeat	1	65	0	2
chr3	78022390	78022391	chunk0126_173_1	49.54268	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	78022390	78022432	-120273127	+	(TCTATA)n	Simple_repeat	Simple_repeat	1	42	0	2
chr3	78087480	78087481	chunk0126_177_1	37.81002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	78087451	78087534	-120208025	+	Tigger7	DNA	TcMar-Tigger	2405	2486	-5	2
chr3	78123309	78123310	chunk0126_179_1	50.2103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	78123040	78123359	-120172200	+	L2c	LINE	L2	3058	3386	-1	2
chr3	78141676	78141677	chunk0126_181_1	15.66684	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	78141623	78141744	-120153815	+	L2a	LINE	L2	3286	3409	-17	2
chr3	78217642	78217643	chunk0126_185_1	16.4118	AR_DHT_Control	chr3	78217624	78217912	-120077647	+	LTR33C	LTR	ERVL	335	627	-2	2
chr3	78304843	78304844	chunk0126_187_1	5.6425	AR_DHT_Control	chr3	78304736	78304974	-119990585	+	Tigger3c	DNA	TcMar-Tigger	366	602	0	2
chr3	78426812	78426813	chunk0126_191_1	45.1307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	78426787	78426907	-119868652	+	L2b	LINE	L2	3251	3375	0	2
chr3	78541398	78541399	chunk0126_198_1	31.11463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	78540956	78545706	-119749853	+	LTR43-int	LTR	ERV1	11	4798	0	2
chr3	78608985	78608986	chunk0126_199_1	6.69534	AR_DHT_Control	chr3	78608589	78609075	-119686484	-	L2	LINE	L2	-618	2801	2304	2
chr3	78785019	78785020	chunk0126_213_1	13.2288	AR_DHT_Control	chr3	78785014	78785133	-119510426	+	MER91A	DNA	hAT-Tip100	9	152	-44	2
chr3	78815102	78815103	chunk0126_216_1	10.0392	AR_DHT_Control	chr3	78814768	78815643	-119479916	+	Tigger1	DNA	TcMar-Tigger	1	891	-1527	2
chr3	79030264	79030265	chunk0126_233_1	5.6425	AR_DHT_Control	chr3	79030213	79030427	-119265132	+	MER20	DNA	hAT-Charlie	29	219	0	2
chr3	79343282	79343283	chunk0126_241_1	15.3505	AR_DHT_Control	chr3	79342774	79343460	-118952099	-	L1MC1	LINE	L1	-94	6239	5523	2
chr3	79437723	79437724	chunk0126_254_1	24.5896	AR_DHT_Control	chr3	79437388	79437906	-118857653	+	L1ME3A	LINE	L1	5583	6161	-12	2
chr3	79622432	79622433	chunk0126_260_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	79621902	79623135	-118672424	+	L1PA8A	LINE	L1	1	1259	-5224	2
chr3	79868135	79868136	chunk0126_263_1	6.96641	AR_DHT_Control	chr3	79867865	79868540	-118427019	+	L2c	LINE	L2	2097	2784	-635	2
chr3	79909435	79909436	chunk0126_270_1	12.80806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	79909435	79909991	-118385568	+	MER41A	LTR	ERV1	1	554	0	2
chr3	79999295	79999296	chunk0126_274_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	79999165	79999624	-118295935	-	MLT1C	LTR	ERVL-MaLR	0	467	1	2
chr3	80064285	80064286	chunk0126_277_1	11.4177	AR_DHT_Control	chr3	80064100	80065970	-118229589	+	L1PB3	LINE	L1	4392	6248	-372	2
chr3	80080063	80080064	chunk0126_278_1	59.19319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	80079944	80080078	-118215481	+	MLT1N2	LTR	ERVL-MaLR	116	254	-308	2
chr3	80098610	80098611	chunk0126_281_1	50.4548	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	80098535	80098680	-118196879	-	MER58A	DNA	hAT-Charlie	-1	223	53	2
chr3	80142195	80142196	chunk0126_283_1	64.35181	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	80142085	80142317	-118153242	-	L1MEg	LINE	L1	-5847	395	166	2
chr3	80190134	80190135	chunk0126_286_1	4.77556	AR_DHT_Control	chr3	80190107	80190324	-118105235	-	HERVL40-int	LTR	ERVL	-5300	230	1	2
chr3	80234763	80234764	chunk0126_287_1	120.47865	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	80234547	80234834	-118060725	+	L2c	LINE	L2	2972	3272	-115	2
chr3	80329063	80329064	chunk0126_291_1	18.8646	AR_DHT_Control	chr3	80327823	80329122	-117966437	+	L1MC4	LINE	L1	6426	7838	-204	2
chr3	80420724	80420725	chunk0126_292_1	18.7412	AR_DHT_Control	chr3	80420709	80420745	-117874814	+	(TG)n	Simple_repeat	Simple_repeat	1	36	0	2
chr3	80438669	80438670	chunk0126_293_1	39.1722	AR_DHT_Control	chr3	80438664	80439123	-117856436	+	MLT2B4	LTR	ERVL	2	554	-2	2
chr3	80705281	80705282	chunk0126_299_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	80704590	80706168	-117589391	-	THE1B-int	LTR	ERVL-MaLR	0	1580	1	2
chr3	80712410	80712411	chunk0126_300_1	8.27376	AR_DHT_Control	chr3	80709137	80713680	-117581879	+	L1PA7	LINE	L1	12	4555	-1906	2
chr3	80770660	80770661	chunk0126_302_1	6.93299	AR_DHT_Control	chr3	80770587	80770950	-117524609	-	LTR1A2	LTR	ERV1	-435	348	1	2
chr3	80788640	80788641	chunk0126_303_1	9.07871	AR_DHT_Control	chr3	80788553	80788979	-117506580	+	MLT2B1	LTR	ERVL	1	442	-78	2
chr3	80985583	80985584	chunk0126_306_1	17.1173	AR_DHT_Control	chr3	80985506	80985656	-117309903	+	MIRb	SINE	MIR	60	222	-46	2
chr3	81186333	81186334	chunk0126_310_1	45.9922	AR_DHT_Control	chr3	81186010	81186593	-117108966	+	MSTB-int	LTR	ERVL-MaLR	26	622	-1029	2
chr3	81531465	81531466	chunk0126_314_1	9.07871	AR_DHT_Control	chr3	81528416	81531741	-116763818	-	L1MA3	LINE	L1	-3433	4132	701	2
chr3	81601938	81601939	chunk0126_321_1	82.524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	81601847	81602159	-116693400	-	L2b	LINE	L2	0	3426	3101	2
chr3	81729579	81729580	chunk0126_327_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	81728970	81729605	-116565954	+	ERVL-E-int	LTR	ERVL	3193	3927	-1787	2
chr3	82056445	82056446	chunk0126_334_1	246.8344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	82056435	82056552	-116239007	-	L2b	LINE	L2	0	3375	3256	2
chr3	82103417	82103418	chunk0126_337_1	9.13774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	82103028	82103759	-116191800	-	L1ME1	LINE	L1	-116	6063	5293	2
chr3	82118133	82118134	chunk0126_338_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	82117436	82119060	-116176499	+	L1PA7	LINE	L1	4636	6154	0	2
chr3	82684610	82684611	chunk0126_346_1	10.0392	AR_DHT_Control	chr3	82684236	82685055	-115610504	-	L1MA7	LINE	L1	-894	5249	4248	2
chr3	82707775	82707776	chunk0126_347_1	16.38196	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	82701494	82707830	-115587729	-	L1PA8A	LINE	L1	-42	6404	12	2
chr3	82815742	82815743	chunk0126_350_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	82814690	82816000	-115479559	-	MER52D	LTR	ERV1	0	2123	1	2
chr3	82874953	82874954	chunk0126_351_1	15.82622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	82874910	82875051	-115420508	-	L2	LINE	L2	-738	2681	2540	2
chr3	82888221	82888222	chunk0126_353_1	25.2918	AR_DHT_Control	chr3	82888203	82888534	-115407025	-	MSTD	LTR	ERVL-MaLR	-12	384	13	2
chr3	83047229	83047230	chunk0126_359_1	90.2186	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	83047058	83047284	-115248275	+	L1ME3A	LINE	L1	4583	4795	-1351	2
chr3	83076188	83076189	chunk0126_360_1	4.83532	AR_DHT_Control	chr3	83075701	83076224	-115219335	+	L1MA4	LINE	L1	4311	4823	-1320	2
chr3	83214865	83214866	chunk0126_361_1	33.168	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	83213686	83214887	-115080672	-	L2a	LINE	L2	-191	3235	2028	2
chr3	83250938	83250939	chunk0126_362_1	16.13354	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	83250879	83250997	-115044562	-	MLT1I	LTR	ERVL-MaLR	-278	166	43	2
chr3	83405413	83405414	chunk0126_365_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	83405297	83405781	-114889778	+	LTR40b	LTR	ERVL	4	462	0	2
chr3	83881206	83881207	chunk0126_370_1	104.91547	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	83880985	83881661	-114413898	+	L1MD	LINE	L1	4205	4933	-1213	2
chr3	84024087	84024088	chunk0126_371_1	8.27376	AR_DHT_Control	chr3	84023888	84024183	-114271376	+	L2	LINE	L2	2537	2850	-569	2
chr3	84101207	84101208	chunk0126_372_1	28.86967	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	84101113	84101508	-114194051	-	MER92A	LTR	ERV1	0	412	1	2
chr3	84106326	84106327	chunk0126_374_1	81.02333	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	84106303	84106672	-114188887	+	L1MD2	LINE	L1	6362	6744	-6	2
chr3	84140273	84140274	chunk0126_377_1	128.09383	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	84139696	84140736	-114154823	+	L1MD2	LINE	L1	5270	6350	-9	2
chr3	84144921	84144922	chunk0126_379_1	34.4929	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	84144784	84145006	-114150553	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr3	84161882	84161883	chunk0126_382_1	37.51766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	84161647	84162466	-114133093	-	L1MB3	LINE	L1	0	6419	5566	2
chr3	84222419	84222420	chunk0126_385_1	19.8267	AR_DHT_Control	chr3	84222330	84223085	-114072474	-	MER50-int	LTR	ERV1	-763	5500	4785	2
chr3	84389753	84389754	chunk0126_386_1	7.36432	AR_DHT_Control	chr3	84389537	84389853	-113905706	-	L1PB4	LINE	L1	-3	6153	5823	2
chr3	84863342	84863343	chunk0126_387_1	20.184	AR_DHT_Control	chr3	84862926	84863624	-113431935	-	MER67C	LTR	ERV1	0	711	1	2
chr3	84885691	84885692	chunk0126_391_1	67.2894	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	84884977	84891143	-113404416	+	L1PA6	LINE	L1	176	6325	-2	2
chr3	84887865	84887866	chunk0126_394_1	58.6517	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	84884977	84891143	-113404416	+	L1PA6	LINE	L1	176	6325	-2	2
chr3	85006145	85006146	chunk0126_401_1	9.74084	AR_DHT_Control	chr3	85006012	85006382	-113289177	+	MamRTE1	LINE	RTE-BovB	3415	3803	-9	2
chr3	85007381	85007382	chunk0126_402_1	91.0549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	85007279	85007481	-113288078	-	MER58A	DNA	hAT-Charlie	-2	222	1	2
chr3	85367497	85367498	chunk0126_409_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	85367406	85367590	-112927969	+	L2c	LINE	L2	3203	3387	0	2
chr3	86038122	86038123	chunk0126_418_1	21.63289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	86037834	86038135	-112257424	-	L1PA8	LINE	L1	-8	6164	5854	2
chr3	86345793	86345794	chunk0126_423_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	86344750	86346089	-111949470	-	L1MA2	LINE	L1	-4834	2731	826	2
chr3	86694647	86694648	chunk0126_425_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	86692710	86696319	-111599240	-	HERV30-int	LTR	ERV1	-4636	3621	1	2
chr3	86867527	86867528	chunk0126_426_1	38.7829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	86867515	86867562	-111427997	+	(TTTATTG)n	Simple_repeat	Simple_repeat	1	48	0	2
chr3	87014845	87014846	chunk0126_436_1	23.5856	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	87014327	87014919	-111280640	+	L2b	LINE	L2	2729	3368	-7	2
chr3	87185800	87185801	chunk0126_450_1	30.6265	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	87185766	87185838	-111109721	-	Tigger1	DNA	TcMar-Tigger	-2351	67	1	2
chr3	87247395	87247396	chunk0126_453_1	20.06984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	87247082	87247712	-111047847	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	2
chr3	87358988	87358989	chunk0126_457_1	5.16131	AR_DHT_Control	chr3	87358755	87359387	-110936172	-	Tigger17a	DNA	TcMar-Tigger	-16	638	14	2
chr3	87359307	87359308	chunk0126_458_1	8.5293	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	87358755	87359387	-110936172	-	Tigger17a	DNA	TcMar-Tigger	-16	638	14	2
chr3	87756773	87756774	chunk0127_1_1	52.5452	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	87756632	87757069	-110538490	+	L1MC1	LINE	L1	24	471	-5952	2
chr3	87766857	87766858	chunk0127_3_1	58.8887	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	87766416	87767295	-110528264	+	L1MB8	LINE	L1	111	989	-5878	2
chr3	87782797	87782798	chunk0127_5_1	6.48643	AR_DHT_Control	chr3	87781347	87783203	-110512356	+	L1MA7	LINE	L1	4228	6023	-268	2
chr3	88179269	88179270	chunk0127_17_1	21.6157	AR_DHT_Control	chr3	88177996	88179560	-110115999	+	L1ME2z	LINE	L1	4695	6426	-18	2
chr3	88182843	88182844	chunk0127_18_1	22.1084	AR_DHT_Control	chr3	88181952	88188095	-110107464	+	L1PA6	LINE	L1	5	6151	-3	2
chr3	88329135	88329136	chunk0127_22_1	16.73533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	88329094	88329308	-109966251	+	MER58A	DNA	hAT-Charlie	2	224	0	2
chr3	88365085	88365086	chunk0127_24_1	24.12315	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	88364875	88365132	-109930427	-	MIR	SINE	MIR	-3	259	2	2
chr3	88528546	88528547	chunk0127_25_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	88526099	88529557	-109766002	-	L1PA8A	LINE	L1	-3105	3378	1	2
chr3	88575859	88575860	chunk0127_27_1	10.6083	AR_DHT_Control	chr3	88575602	88575985	-109719574	-	L2a	LINE	L2	-12	3414	3026	2
chr3	88581980	88581981	chunk0127_28_1	9.13774	AR_DHT_Control	chr3	88581974	88581991	-109713568	+	(CA)n	Simple_repeat	Simple_repeat	1	17	0	2
chr3	88747667	88747668	chunk0127_39_1	23.1515	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	88746909	88753147	-109542412	+	L1PA6	LINE	L1	177	6327	0	2
chr3	88802202	88802203	chunk0127_41_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	88801197	88802742	-109492817	-	L1PA13	LINE	L1	0	6163	4681	2
chr3	88960185	88960186	chunk0127_46_1	26.3991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	88959902	88960305	-109335254	-	MLT1C	LTR	ERVL-MaLR	-4	463	59	2
chr3	89162893	89162894	chunk0127_55_1	5.77762	AR_DHT_Control	chr3	89162546	89162974	-109132585	-	LTR16A	LTR	ERVL	-2	449	4	2
chr3	89341131	89341132	chunk0127_64_1	12.1955	AR_DHT_Control	chr3	89341104	89341149	-108954410	+	(TTTGT)n	Simple_repeat	Simple_repeat	1	45	0	2
chr3	89496889	89496890	chunk0127_76_1	165.1162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	89496839	89496938	-108798621	-	L2a	LINE	L2	-5	3421	3315	2
chr3	89655769	89655770	chunk0127_83_1	12.12596	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	89655528	89658550	-108637009	-	L1PREC2	LINE	L1	-3100	5041	657	2
chr3	89666007	89666008	chunk0127_84_1	17.55633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	89665006	89667663	-108627896	-	L1MEc	LINE	L1	-964	5355	2710	2
chr3	89707748	89707749	chunk0127_86_1	31.13226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	89705930	89708983	-108586576	+	L1PB2	LINE	L1	2935	6073	-789	2
chr3	89777896	89777897	chunk0127_89_1	29.7966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	89777127	89778930	-108516629	-	L1P4	LINE	L1	-368	5798	3989	2
chr3	89914799	89914800	chunk0127_94_1	6.83133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	89914412	89915209	-108380350	-	LTR1E	LTR	ERV1	0	804	1	2
chr3	89981941	89981942	chunk0127_97_1	125.064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	89981902	89982411	-108313148	-	L1M5	LINE	L1	-2949	3197	2679	2
chr3	89993602	89993603	chunk0127_99_1	6.48643	AR_DHT_Control	chr3	89992422	89993926	-108301633	+	L1MA3	LINE	L1	6044	7522	-202	2
chr3	90020331	90020332	chunk0127_104_1	46.7397	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	90020090	90020606	-108274953	+	L1MEh	LINE	L1	858	1351	-884	2
chr3	90192962	90192963	chunk0127_113_1	14.2911	AR_DHT_Control	chr3	90187673	90193762	-108101797	-	L1PA6	LINE	L1	-20	6134	1	2
chr3	90246932	90246933	chunk0127_114_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	90246867	90247318	-108048241	-	MSTD-int	LTR	ERVL-MaLR	-1274	461	4	2
chr3	91891280	91891281	chunk0127_118_1	76.7699	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr3	91891196	91891572	-106403987	+	ACRO1	Satellite	acro	1	376	0	2
chr3	93470509	93470510	chunk0127_119_1	1258.499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	93470361	93470799	-104824760	+	SAR	Satellite	Satellite	1	440	-2	2
chr3	93852080	93852081	chunk0127_122_1	13.2288	AR_DHT_Control	chr3	93846770	93852898	-104442661	-	L1PA6	LINE	L1	-11	6143	1	2
chr3	93893552	93893553	chunk0127_123_1	7.03714	AR_DHT_Control	chr3	93893520	93893560	-104401999	+	(T)n	Simple_repeat	Simple_repeat	1	40	0	2
chr3	94018657	94018658	chunk0127_129_1	7.36432	AR_DHT_Control	chr3	94018360	94018765	-104276794	+	L2a	LINE	L2	2056	2556	-863	2
chr3	94345428	94345429	chunk0127_144_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	94344955	94345714	-103949845	-	LTR17	LTR	ERV1	0	780	1	2
chr3	94416693	94416694	chunk0127_147_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94416121	94417039	-103878520	-	Charlie25	DNA	hAT-Charlie	-518	2006	1032	2
chr3	94418724	94418725	chunk0127_148_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	94417948	94424424	-103871135	+	L1PA15	LINE	L1	288	6783	-2	2
chr3	94419093	94419094	chunk0127_149_1	8.13469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	94417948	94424424	-103871135	+	L1PA15	LINE	L1	288	6783	-2	2
chr3	94480154	94480155	chunk0127_150_1	71.67683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	94479837	94480169	-103815390	+	MER2	DNA	TcMar-Tigger	1	345	0	2
chr3	94586792	94586793	chunk0127_157_1	43.8293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94586648	94587096	-103708463	-	L2c	LINE	L2	-225	3162	2684	2
chr3	94600204	94600205	chunk0127_159_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94599281	94601162	-103694397	+	L1PB1	LINE	L1	4235	6148	-3	2
chr3	94735691	94735692	chunk0127_160_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94735453	94735855	-103559704	-	L2	LINE	L2	-980	2439	2017	2
chr3	94813239	94813240	chunk0127_164_1	4.92181	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94813028	94813331	-103482228	-	MIR	SINE	MIR	0	262	2	2
chr3	94893605	94893606	chunk0127_166_1	100.79742	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94893506	94893939	-103401620	+	LTR24	LTR	ERV1	1	437	-30	2
chr3	94982603	94982604	chunk0127_167_1	23.2639	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	94981576	94983630	-103311929	-	L1MC3	LINE	L1	-1044	6741	4663	2
chr3	95012664	95012665	chunk0127_170_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	95012660	95012695	-103282864	+	(ATAA)n	Simple_repeat	Simple_repeat	1	35	0	2
chr3	95140959	95140960	chunk0127_171_1	35.4334	AR_DHT_Control	chr3	95140392	95140960	-103154599	+	L1MC2	LINE	L1	5312	5902	-442	2
chr3	95227322	95227323	chunk0127_174_1	7.36432	AR_DHT_Control	chr3	95227181	95227410	-103068149	+	LTR33	LTR	ERVL	157	400	-115	2
chr3	95366333	95366334	chunk0127_179_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	95366110	95366452	-102929107	+	MER77	LTR	ERVL	8	395	-209	2
chr3	95388730	95388731	chunk0127_180_1	4.83532	AR_DHT_Control	chr3	95388090	95388939	-102906620	-	L1MEc	LINE	L1	-5389	1011	90	2
chr3	95728616	95728617	chunk0127_187_1	5.6425	AR_DHT_Control	chr3	95728544	95729132	-102566427	-	L1PA16	LINE	L1	-123	6043	5456	2
chr3	95977178	95977179	chunk0127_191_1	9.57048	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	95976525	95978121	-102317438	+	L1PB1	LINE	L1	4549	6150	-1	2
chr3	96034674	96034675	chunk0127_193_1	20.34212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	96034121	96037515	-102258044	-	L1MC1	LINE	L1	0	6508	3118	2
chr3	96044824	96044825	chunk0127_194_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96044368	96045952	-102249607	-	THE1C-int	LTR	ERVL-MaLR	0	1580	1	2
chr3	96101301	96101302	chunk0127_196_1	42.5524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96100892	96102894	-102192665	-	L1PA17	LINE	L1	-365	5791	3783	2
chr3	96111455	96111456	chunk0127_197_1	8.18895	AR_DHT_Control	chr3	96110876	96111793	-102183766	-	L1MB8	LINE	L1	-6	7032	6089	2
chr3	96112028	96112029	chunk0127_198_1	9.94664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96111959	96112309	-102183250	-	L1MB8	LINE	L1	-4855	3024	2781	2
chr3	96199104	96199105	chunk0127_200_1	6.13992	AR_DHT_Control	chr3	96199039	96199369	-102096190	+	L1MEc	LINE	L1	34	367	-6033	2
chr3	96209215	96209216	chunk0127_201_1	10.1791	AR_DHT_Control	chr3	96209185	96209432	-102086127	+	MLT1E1	LTR	ERVL-MaLR	402	654	0	2
chr3	96347383	96347384	chunk0127_205_1	14.24617	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	96347176	96347829	-101947730	+	L1ME1	LINE	L1	6288	6959	0	2
chr3	96393676	96393677	chunk0127_206_1	42.87483	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96393391	96393977	-101901582	-	L1ME1	LINE	L1	-475	5689	4965	2
chr3	96416532	96416533	chunk0127_208_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96416159	96417162	-101878397	-	L1PA14	LINE	L1	-5307	1382	136	2
chr3	96455776	96455777	chunk0127_211_1	6.83133	AR_DHT_Control	chr3	96455776	96458172	-101837387	+	L1MA4	LINE	L1	2006	4398	-3164	2
chr3	96516722	96516723	chunk0127_215_1	50.9976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96516030	96521352	-101774207	+	L1MA1	LINE	L1	2352	7721	0	2
chr3	96576870	96576871	chunk0127_217_1	13.30244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	96576852	96576907	-101718652	-	MIR	SINE	MIR	-72	190	133	2
chr3	96651367	96651368	chunk0127_221_1	15.96426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	96651203	96651469	-101644090	-	L1ME3A	LINE	L1	-3150	3169	2897	2
chr3	96683899	96683900	chunk0127_223_1	42.97554	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	96681834	96686779	-101608780	-	L1MA1	LINE	L1	-2441	5124	106	2
chr3	96685794	96685795	chunk0127_224_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96681834	96686779	-101608780	-	L1MA1	LINE	L1	-2441	5124	106	2
chr3	96712967	96712968	chunk0127_225_1	43.4015	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	96712946	96713954	-101581605	-	Tigger6a	DNA	TcMar-Tigger	0	1083	2	2
chr3	96750550	96750551	chunk0127_228_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96749935	96751121	-101544438	+	MER52C	LTR	ERV1	2	1278	0	2
chr3	96795078	96795079	chunk0127_232_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96792026	96795529	-101500030	-	L1MA4A	LINE	L1	-3178	4387	719	2
chr3	96820491	96820492	chunk0127_236_1	6.04575	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96819873	96820501	-101475058	-	L2a	LINE	L2	-149	3277	2616	2
chr3	96883625	96883626	chunk0127_239_1	5.99997	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	96882769	96883671	-101411888	-	L1PB1	LINE	L1	-356	6511	5623	2
chr3	96915646	96915647	chunk0127_240_1	8.27376	AR_DHT_Control	chr3	96915496	96915676	-101379883	-	MIRb	SINE	MIR	-58	210	23	2
chr3	96931686	96931687	chunk0127_241_1	40.866	AR_DHT_Control	chr3	96931021	96932312	-101363247	-	L1PA10	LINE	L1	-5533	2070	1	2
chr3	96986487	96986488	chunk0127_243_1	135.4963	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	96986306	96986786	-101308773	+	L2a	LINE	L2	2841	3420	-6	2
chr3	97011427	97011428	chunk0127_245_1	11.5901	AR_DHT_Control	chr3	97011034	97011455	-101284104	-	LTR38	LTR	ERV1	0	556	137	2
chr3	97188803	97188804	chunk0127_253_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97188734	97188966	-101106593	+	L1ME3G	LINE	L1	613	867	-57	2
chr3	97229104	97229105	chunk0127_257_1	14.37	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97228584	97229507	-101066052	-	L1PB1	LINE	L1	-360	5791	4864	2
chr3	97230684	97230685	chunk0127_258_1	20.759	AR_DHT_Control	chr3	97230570	97231138	-101064421	-	MER34C_	LTR	ERV1	0	585	5	2
chr3	97287566	97287567	chunk0127_261_1	6.83133	AR_DHT_Control	chr3	97287494	97288056	-101007503	-	L1MA4A	LINE	L1	-219	4051	3500	2
chr3	97327375	97327376	chunk0127_262_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97327269	97327836	-100967723	-	L1MD2	LINE	L1	-3	6356	5783	2
chr3	97485409	97485410	chunk0127_266_1	28.4265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97485245	97485423	-100810136	-	MER45A	DNA	hAT-Tip100	-1	177	1	2
chr3	97668123	97668124	chunk0127_268_1	15.42141	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97668077	97668631	-100626928	-	LTR82A	LTR	ERVL	-24	848	270	2
chr3	97678914	97678915	chunk0127_270_1	55.0602	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97678856	97679145	-100616414	-	L1MEi	LINE	L1	-3981	2516	2249	2
chr3	97705557	97705558	chunk0127_276_1	19.556	AR_DHT_Control	chr3	97705481	97705595	-100589964	-	L2a	LINE	L2	-3	3423	3305	2
chr3	97776056	97776057	chunk0127_278_1	18.29882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97775659	97776608	-100518951	-	L1MA4	LINE	L1	-3216	4346	3408	2
chr3	97870377	97870378	chunk0127_283_1	141.8519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97870141	97870609	-100424950	-	L1PA15	LINE	L1	-9	6156	5684	2
chr3	97926957	97926958	chunk0127_288_1	86.77421	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	97926059	97928576	-100366983	+	L1PA15	LINE	L1	3629	6165	0	2
chr3	97928373	97928374	chunk0127_289_1	35.7399	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	97926059	97928576	-100366983	+	L1PA15	LINE	L1	3629	6165	0	2
chr3	97940412	97940413	chunk0127_291_1	21.6871	AR_DHT_Control	chr3	97940327	97940486	-100355073	+	MIRb	SINE	MIR	109	260	-8	2
chr3	97948454	97948455	chunk0127_293_1	15.6062	AR_DHT_Control	chr3	97948356	97948909	-100346650	+	MER90a	LTR	ERV1	1	614	0	2
chr3	97957937	97957938	chunk0127_294_1	5.53391	AR_DHT_Control	chr3	97957825	97958027	-100337532	-	MER58A	DNA	hAT-Charlie	-19	205	1	2
chr3	98162142	98162143	chunk0127_295_1	20.6152	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	98161993	98163665	-100131894	-	MLT1A1-int	LTR	ERVL-MaLR	0	1735	1	2
chr3	98185360	98185361	chunk0127_296_1	47.2559	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	98185255	98185701	-100109858	-	HUERS-P3b-int	LTR	ERV1	-7	7411	6973	2
chr3	98225361	98225362	chunk0127_298_1	18.36249	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	98225209	98225398	-100070161	-	MER31-int	LTR	ERV1	-544	5643	5443	2
chr3	98275344	98275345	chunk0127_301_1	6.18182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	98274401	98275441	-100020118	+	LTR28C	LTR	ERV1	1	1129	0	2
chr3	98830098	98830099	chunk0127_308_1	20.3192	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	98829291	98831069	-99464490	-	L1PREC2	LINE	L1	-3	8152	6316	2
chr3	100152024	100152025	chunk0127_324_1	7.57442	AR_DHT_Control	chr3	100151744	100152640	-98142919	-	MLT1B-int	LTR	ERVL-MaLR	-6	1483	554	2
chr3	100153769	100153770	chunk0127_325_1	9.94664	AR_DHT_Control	chr3	100153762	100153838	-98141721	-	L1M5	LINE	L1	-635	5809	5734	2
chr3	100416326	100416327	chunk0127_330_1	8.27376	AR_DHT_Control	chr3	100416236	100416418	-97879141	-	L1MC5	LINE	L1	-539	2452	2257	2
chr3	100438046	100438047	chunk0127_331_1	7.03714	AR_DHT_Control	chr3	100437923	100438075	-97857484	+	MIRb	SINE	MIR	81	245	-23	2
chr3	100449683	100449684	chunk0127_332_1	16.9343	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	100448376	100450332	-97845227	-	MER4-int	LTR	ERV1	-4102	2496	263	2
chr3	100482062	100482063	chunk0127_334_1	7.00991	AR_DHT_Control	chr3	100481876	100482089	-97813470	+	L2	LINE	L2	2673	2890	-529	2
chr3	100484401	100484402	chunk0127_335_1	43.0416	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	100484131	100484676	-97810883	-	L1MEg	LINE	L1	-3635	2684	2155	2
chr3	100563189	100563190	chunk0127_339_1	22.89941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	100562966	100563422	-97732137	-	MLT1C	LTR	ERVL-MaLR	0	467	1	2
chr3	100683332	100683333	chunk0127_344_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	100683040	100683781	-97611778	+	MER52A	LTR	ERV1	1027	1755	0	2
chr3	100717841	100717842	chunk0127_348_1	23.1791	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	100715936	100717903	-97577656	-	L1MA5A	LINE	L1	-1	6296	4124	2
chr3	100783735	100783736	chunk0127_349_1	49.0557	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	100783659	100783870	-97511689	-	MER58A	DNA	hAT-Charlie	-29	195	2	2
chr3	101070317	101070318	chunk0127_353_1	47.59624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	101070243	101070491	-97225068	-	MLT1N2	LTR	ERVL-MaLR	-19	543	274	2
chr3	101441479	101441480	chunk0127_357_1	8.27376	AR_DHT_Control	chr3	101441188	101442245	-96853314	+	L1M2	LINE	L1	1511	2505	-5061	2
chr3	101792833	101792834	chunk0127_367_1	21.44018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	101791675	101793620	-96501939	-	L1PA14	LINE	L1	-406	5928	2208	2
chr3	101878975	101878976	chunk0127_370_1	5.00158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	101878907	101878977	-96416582	+	MIR	SINE	MIR	72	142	-120	2
chr3	101901110	101901111	chunk0127_371_1	29.5235	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	101900660	101901246	-96394313	+	MER67D	LTR	ERV1	1	510	-4	2
chr3	101925623	101925624	chunk0127_374_1	56.27312	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	101925503	101926050	-96369509	+	HAL1	LINE	L1	1903	2394	-113	2
chr3	101978718	101978719	chunk0127_375_1	65.4751	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	101978548	101979136	-96316423	-	L1ME3G	LINE	L1	-289	635	117	2
chr3	102007294	102007295	chunk0127_378_1	11.1716	AR_DHT_Control	chr3	102007255	102007432	-96288127	+	LTR16A	LTR	ERVL	1	184	-267	2
chr3	102055537	102055538	chunk0127_379_1	43.9748	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	102055532	102055692	-96239867	-	MIRb	SINE	MIR	-5	257	93	2
chr3	102113476	102113477	chunk0127_383_1	12.3208	AR_DHT_Control	chr3	102113465	102113483	-96182076	+	(TGA)n	Simple_repeat	Simple_repeat	1	18	0	2
chr3	102125559	102125560	chunk0127_384_1	71.0721	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	102125559	102125731	-96169828	+	THE1-int	LTR	ERVL-MaLR	1297	1478	-102	2
chr3	102197506	102197507	chunk0127_390_1	6.3364	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	102197265	102197516	-96098043	+	L2a	LINE	L2	167	422	-2997	2
chr3	102238420	102238421	chunk0127_392_1	220.5897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr3	102238402	102238598	-96056961	-	Charlie17a	DNA	hAT-Charlie	-25	192	1	2
chr3	102345235	102345236	chunk0127_396_1	20.6382	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	102345066	102345318	-95950241	+	L2a	LINE	L2	3156	3422	-4	2
chr3	102363140	102363141	chunk0127_400_1	7.48058	AR_DHT_Control	chr3	102363031	102364740	-95930819	+	L1M2c	LINE	L1	638	2270	-4519	2
chr3	102366151	102366152	chunk0127_401_1	24.2325	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	102365625	102368434	-95927125	-	L1PA7	LINE	L1	-318	6302	3433	2
chr3	102424691	102424692	chunk0127_402_1	14.4295	AR_DHT_Control	chr3	102424640	102424863	-95870696	-	MER112	DNA	hAT-Charlie	-2	259	53	2
chr3	102576230	102576231	chunk0127_413_1	5.40938	AR_DHT_Control	chr3	102576105	102576264	-95719295	-	L2c	LINE	L2	-96	3291	3129	2
chr3	102600099	102600100	chunk0127_421_1	149.1901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	102599998	102600200	-95695359	-	LTR23	LTR	ERV1	-127	310	106	2
chr3	102635294	102635295	chunk0127_423_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	102635278	102635890	-95659669	-	L1M8	LINE	L1	-413	1942	1276	2
chr3	102671233	102671234	chunk0127_425_1	123.4902	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	102670938	102671455	-95624104	-	LTR40a	LTR	ERVL	0	519	1	2
chr3	102693413	102693414	chunk0127_429_1	27.22174	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	102693275	102693868	-95601691	-	LTR29	LTR	ERV1	-1	643	1	2
chr3	103182397	103182398	chunk0127_437_1	8.27376	AR_DHT_Control	chr3	103182295	103185541	-95110018	-	L1M4c	LINE	L1	-2972	3410	4	2
chr3	103326024	103326025	chunk0128_1_1	22.2679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	103325811	103326298	-94969261	-	L1MC4	LINE	L1	-427	7615	7186	2
chr3	103428412	103428413	chunk0128_2_1	70.4999	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	103428246	103428830	-94866729	+	MER92B	LTR	ERV1	1	625	-11	2
chr3	103554723	103554724	chunk0128_5_1	10.1791	AR_DHT_Control	chr3	103554286	103554989	-94740570	-	LTR30	LTR	ERV1	0	722	1	2
chr3	103623985	103623986	chunk0128_7_1	46.5052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	103623976	103628167	-94667392	-	L1MA4	LINE	L1	-359	7360	3007	2
chr3	103686088	103686089	chunk0128_9_1	8.95381	AR_DHT_Control	chr3	103685982	103686148	-94609411	-	L1MA9	LINE	L1	-525	5787	5619	2
chr3	103721569	103721570	chunk0128_13_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	103720557	103721619	-94573940	-	L1MA9	LINE	L1	-4763	2802	2017	2
chr3	103889307	103889308	chunk0128_16_1	6.09694	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	103889274	103889639	-94405920	-	L3	LINE	CR1	-1268	2831	2470	2
chr3	104144325	104144326	chunk0128_19_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104144211	104144399	-94151160	-	L1M5	LINE	L1	-3201	2945	2761	2
chr3	104207111	104207112	chunk0128_23_1	45.08434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	104207033	104207529	-94088030	+	MER1A	DNA	hAT-Charlie	31	529	0	2
chr3	104215205	104215206	chunk0128_24_1	10.1791	AR_DHT_Control	chr3	104214628	104215298	-94080261	+	LTR41C	LTR	ERVL	1	701	0	2
chr3	104236387	104236388	chunk0128_29_1	5.15332	AR_DHT_Control	chr3	104236123	104239623	-94055936	-	L1MA6	LINE	L1	-129	7590	4192	2
chr3	104266447	104266448	chunk0128_30_1	16.3794	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104265628	104268366	-94027193	-	L1MA4A	LINE	L1	-366	6501	3816	2
chr3	104300437	104300438	chunk0128_31_1	281.6151	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104300202	104300847	-93994712	+	L1MA2	LINE	L1	5630	6304	0	2
chr3	104318545	104318546	chunk0128_32_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104316123	104321963	-93973596	+	L1M1	LINE	L1	112	6428	-1137	2
chr3	104566368	104566369	chunk0128_37_1	12.0293	AR_DHT_Control	chr3	104566362	104566750	-93728809	-	Tigger15a	DNA	TcMar-Tigger	-287	428	42	2
chr3	104611457	104611458	chunk0128_42_1	288.155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	104611227	104611812	-93683747	+	L2b	LINE	L2	2764	3375	0	2
chr3	104659132	104659133	chunk0128_45_1	8.64577	AR_DHT_Control	chr3	104657930	104659273	-93636286	-	L1MA4A	LINE	L1	-4106	3460	2068	2
chr3	104677262	104677263	chunk0128_46_1	36.3753	AR_DHT_Control	chr3	104676857	104677625	-93617934	+	L1PA15	LINE	L1	5391	6160	-5	2
chr3	104696320	104696321	chunk0128_47_1	74.9432	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	104690949	104697119	-93598440	-	L1PA6	LINE	L1	0	6154	1	2
chr3	104811136	104811137	chunk0128_49_1	46.80257	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104810933	104811142	-93484417	-	7SK	RNA	RNA	-99	232	23	2
chr3	104820717	104820718	chunk0128_54_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	104820408	104820922	-93474637	-	LTR16E2	LTR	ERVL	-25	543	10	2
chr3	104947197	104947198	chunk0128_59_1	9.34963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	104947157	104948722	-93346837	-	L1PA13	LINE	L1	-815	5331	3758	2
chr3	104954373	104954374	chunk0128_61_1	8.70654	AR_DHT_Control	chr3	104954301	104954668	-93340891	+	L1MC3	LINE	L1	5674	5997	-187	2
chr3	105095286	105095287	chunk0128_64_1	6.48643	AR_DHT_Control	chr3	105095137	105095360	-93200199	-	MIR	SINE	MIR	-11	251	4	2
chr3	105357100	105357101	chunk0128_75_1	12.4153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	105357063	105357256	-92938303	-	MER63A	DNA	hAT-Blackjack	-6	204	1	2
chr3	105455579	105455580	chunk0128_83_1	108.83514	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	105455563	105455819	-92839740	+	MER66B	LTR	ERV1	6	255	-231	2
chr3	105654186	105654187	chunk0128_87_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	105654022	105654385	-92641174	-	LTR78B	LTR	ERV1	-605	691	283	2
chr3	105988154	105988155	chunk0128_101_1	8.27376	AR_DHT_Control	chr3	105987369	105989483	-92306076	+	L2a	LINE	L2	1118	3399	-27	2
chr3	106026077	106026078	chunk0128_102_1	49.7519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	106025134	106026625	-92268934	+	L1MEi	LINE	L1	122	1763	-449	2
chr3	106065945	106065946	chunk0128_104_1	22.69782	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106065778	106066528	-92229031	+	L1MA1	LINE	L1	7017	7721	0	2
chr3	106086166	106086167	chunk0128_106_1	7.86105	AR_DHT_Control	chr3	106086148	106086563	-92208996	-	MER72B	LTR	ERV1	-8	760	329	2
chr3	106285280	106285281	chunk0128_114_1	14.62702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106285008	106288017	-92007542	+	L1PREC2	LINE	L1	3713	6780	0	2
chr3	106350443	106350444	chunk0128_118_1	23.59862	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106350442	106351001	-91944558	-	L1ME4b	LINE	L1	-269	623	35	2
chr3	106417516	106417517	chunk0128_122_1	13.79889	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106417129	106418175	-91877384	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	1068	0	2
chr3	106446215	106446216	chunk0128_123_1	10.5201	AR_DHT_Control	chr3	106445935	106446300	-91849259	+	L1ME2	LINE	L1	5772	6156	-8	2
chr3	106457427	106457428	chunk0128_125_1	15.31692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106457178	106457708	-91837851	+	MLT1F1	LTR	ERVL-MaLR	1	561	-8	2
chr3	106474808	106474809	chunk0128_126_1	13.3499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	106473802	106478157	-91817402	-	L1MA9	LINE	L1	-155	7576	3046	2
chr3	106573751	106573752	chunk0128_131_1	297.3219	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	106573690	106574048	-91721511	+	MER57C1	LTR	ERV1	4	384	-1	2
chr3	106709514	106709515	chunk0128_137_1	9.96971	AR_DHT_Control	chr3	106709443	106709528	-91586031	+	OldhAT1	DNA	hAT-Ac	922	1004	-1844	2
chr3	106774804	106774805	chunk0128_140_1	11.6482	AR_DHT_Control	chr3	106774593	106774861	-91520698	+	L4_A_Mam	LINE	RTE-X	4282	4576	-414	2
chr3	106829165	106829166	chunk0128_142_1	6.93299	AR_DHT_Control	chr3	106829156	106829483	-91466076	-	MLT1J2	LTR	ERVL-MaLR	-14	434	108	2
chr3	106836883	106836884	chunk0128_143_1	11.4177	AR_DHT_Control	chr3	106835682	106837130	-91458429	-	LOR1-int	LTR	ERV1	-6008	2112	639	2
chr3	106946079	106946080	chunk0128_145_1	18.70584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	106945961	106946193	-91349366	+	L1MEi	LINE	L1	1466	1703	-509	2
chr3	106972551	106972552	chunk0128_151_1	39.9865	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	106972532	106972778	-91322781	+	MIR	SINE	MIR	5	248	-14	2
chr3	106989357	106989358	chunk0128_152_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	106988772	106989476	-91306083	+	L1MA6	LINE	L1	401	1409	-6157	2
chr3	107171311	107171312	chunk0128_157_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	107170462	107172085	-91123474	+	THE1D-int	LTR	ERVL-MaLR	1	1631	0	2
chr3	107204390	107204391	chunk0128_161_1	184.916	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	107204096	107205370	-91090189	+	L1PA16	LINE	L1	4920	6165	-1	2
chr3	107260422	107260423	chunk0128_165_1	70.4727	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	107260303	107260585	-91034974	+	L1MEg	LINE	L1	103	473	-5769	2
chr3	107275026	107275027	chunk0128_170_1	44.38303	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	107274456	107275095	-91020464	+	ERV3-16A3_I-int	LTR	ERVL	887	1533	-3693	2
chr3	107293856	107293857	chunk0128_175_1	81.4492	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	107292791	107295004	-91000555	-	L1ME1	LINE	L1	-36	6316	3950	2
chr3	107361203	107361204	chunk0128_177_1	7.36432	AR_DHT_Control	chr3	107361165	107361466	-90934093	+	AluJr	SINE	Alu	1	298	-14	2
chr3	107504635	107504636	chunk0128_191_1	9.25776	AR_DHT_Control	chr3	107504524	107504751	-90790808	+	MLT1J2	LTR	ERVL-MaLR	60	323	-125	2
chr3	107520735	107520736	chunk0128_192_1	66.7086	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	107520563	107520755	-90774804	+	MIRc	SINE	MIR	3	197	-71	2
chr3	107622388	107622389	chunk0128_196_1	20.0646	AR_DHT_Control	chr3	107621972	107622542	-90673017	-	L1ME1	LINE	L1	-54	6125	5535	2
chr3	107712667	107712668	chunk0128_199_1	6.84874	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	107712176	107712766	-90582793	+	L2	LINE	L2	2253	2834	-585	2
chr3	108013461	108013462	chunk0128_211_1	6.49378	AR_DHT_Control	chr3	108013410	108013794	-90281765	-	MamTip3	DNA	hAT-Tip100	0	500	116	2
chr3	108060524	108060525	chunk0128_216_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	108060166	108060678	-90234881	+	MLT1D	LTR	ERVL-MaLR	1	505	0	2
chr3	108103559	108103560	chunk0128_220_1	56.8393	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	108103385	108103578	-90191981	-	MER58A	DNA	hAT-Charlie	0	224	23	2
chr3	108214415	108214416	chunk0128_223_1	16.46675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	108214274	108214778	-90080781	-	L1ME4b	LINE	L1	-295	597	73	2
chr3	108243401	108243402	chunk0128_226_1	147.1835	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	108243188	108243871	-90051688	+	MER101-int	LTR	ERV1	1188	1884	-4755	2
chr3	108319544	108319545	chunk0128_230_1	28.1419	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	108319525	108319670	-89975889	-	LTR82B	LTR	ERVL	-176	654	502	2
chr3	108405969	108405970	chunk0128_234_1	96.2797	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	108405781	108405971	-89889588	+	L3	LINE	CR1	3501	3728	-371	2
chr3	108409903	108409904	chunk0128_238_1	28.29585	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	108409652	108409978	-89885581	+	L1ME3G	LINE	L1	263	519	-373	2
chr3	108693650	108693651	chunk0128_247_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	108693600	108693662	-89601897	+	L2c	LINE	L2	3315	3371	-16	2
chr3	108700469	108700470	chunk0128_249_1	17.36073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	108700013	108703724	-89591835	-	L1MA2	LINE	L1	-1444	6121	2372	2
chr3	108795283	108795284	chunk0128_250_1	40.54817	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	108794935	108795633	-89499926	+	L1MC3	LINE	L1	5177	5854	-1931	2
chr3	110399494	110399495	chunk0128_264_1	5.6425	AR_DHT_Control	chr3	110399476	110399574	-87895985	+	L2a	LINE	L2	3247	3350	-76	2
chr3	110507685	110507686	chunk0128_266_1	19.02499	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	110506804	110513192	-87782367	-	L1PB1	LINE	L1	0	6867	255	2
chr3	110538754	110538755	chunk0128_268_1	35.4958	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	110538731	110538828	-87756731	-	MIRc	SINE	MIR	-2	266	171	2
chr3	110562177	110562178	chunk0128_269_1	7.16019	AR_DHT_Control	chr3	110557878	110563062	-87732497	-	L1MA3	LINE	L1	-1776	5789	65	2
chr3	110612211	110612212	chunk0128_273_1	31.5267	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	110611889	110612239	-87683320	+	L2a	LINE	L2	3074	3423	-3	2
chr3	110881239	110881240	chunk0128_283_1	9.21264	AR_DHT_Control	chr3	110881040	110881515	-87414044	+	MLT1G1	LTR	ERVL-MaLR	75	577	-2	2
chr3	110909809	110909810	chunk0128_284_1	13.02758	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	110909529	110909868	-87385691	+	MamRep434	DNA	TcMar-Tigger	49	420	-6	2
chr3	110946963	110946964	chunk0128_290_1	78.4867	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	110943796	110947246	-87348313	+	L1M2	LINE	L1	368	3947	-3258	2
chr3	110961402	110961403	chunk0128_293_1	6.10347	AR_DHT_Control	chr3	110960275	110962808	-87332751	+	L1MCa	LINE	L1	826	3587	-3354	2
chr3	110985104	110985105	chunk0128_294_1	51.3496	AR_DHT_Control	chr3	110984984	110985402	-87310157	+	LTR3B	LTR	ERVK	1	433	-4	2
chr3	111403097	111403098	chunk0128_298_1	35.5639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	111403062	111405917	-86889642	-	L1M2a	LINE	L1	-3002	4563	1506	2
chr3	111423224	111423225	chunk0128_300_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	111422668	111424152	-86871407	+	L1PB3	LINE	L1	4723	6154	0	2
chr3	111428548	111428549	chunk0128_301_1	30.33612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	111428283	111429692	-86865867	+	MSTB-int	LTR	ERVL-MaLR	1	1451	-200	2
chr3	111498399	111498400	chunk0128_304_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	111497802	111498400	-86797159	+	MER54B	LTR	ERVL	182	793	0	2
chr3	111585097	111585098	chunk0128_307_1	24.24265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	111584828	111585175	-86710384	+	L2c	LINE	L2	3030	3396	-30	2
chr3	111763911	111763912	chunk0128_314_1	5.6503	AR_DHT_Control	chr3	111763610	111763961	-86531598	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	2
chr3	111914224	111914225	chunk0128_323_1	20.1322	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	111914076	111914676	-86380883	-	L1ME3G	LINE	L1	-276	648	17	2
chr3	111924409	111924410	chunk0128_326_1	15.72199	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	111922873	111924425	-86371134	+	L2b	LINE	L2	1626	3367	-8	2
chr3	111972820	111972821	chunk0128_329_1	4.40478	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	111972587	111972997	-86322562	-	L1ME4b	LINE	L1	-190	702	251	2
chr3	112005143	112005144	chunk0128_331_1	7.52656	AR_DHT_Control	chr3	112005056	112005283	-86290276	+	MIRb	SINE	MIR	17	262	-6	2
chr3	112134967	112134968	chunk0128_338_1	174.19832	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	112134565	112135124	-86160435	+	L1ME1	LINE	L1	5579	6160	-19	2
chr3	112228830	112228831	chunk0128_339_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112227649	112228855	-86066704	+	L1MA5	LINE	L1	5638	6884	-835	2
chr3	112314774	112314775	chunk0128_341_1	22.4803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	112314629	112315061	-85980498	-	MER4C	LTR	ERV1	-8	457	1	2
chr3	112395189	112395190	chunk0128_342_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112394922	112395221	-85900338	+	AluSx	SINE	Alu	1	300	-12	2
chr3	112406771	112406772	chunk0128_343_1	14.60937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112406678	112406896	-85888663	-	L1MA9	LINE	L1	0	6312	6089	2
chr3	112440727	112440728	chunk0128_348_1	61.3723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112439466	112442594	-85852965	+	L1PA16	LINE	L1	3348	6522	-112	2
chr3	112633137	112633138	chunk0128_350_1	12.4482	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112632948	112633161	-85662398	+	MIRc	SINE	MIR	4	228	-40	2
chr3	112984755	112984756	chunk0128_352_1	25.43202	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	112984540	112985109	-85310450	+	MER68	LTR	ERVL	1	563	0	2
chr3	113084389	113084390	chunk0128_360_1	19.59304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	113084123	113084422	-85211137	+	AluJr4	SINE	Alu	1	296	-16	2
chr3	113271814	113271815	chunk0128_369_1	38.3445	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	113271698	113272157	-85023402	-	MamRep137	DNA	TcMar-Tigger	-46	464	27	2
chr3	113390422	113390423	chunk0128_377_1	7.36432	AR_DHT_Control	chr3	113388286	113392711	-84902848	+	L1MA3	LINE	L1	3288	7724	0	2
chr3	113508730	113508731	chunk0128_379_1	51.891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	113507947	113509254	-84786305	+	L1MB7	LINE	L1	4802	6183	-1	2
chr3	113523404	113523405	chunk0128_381_1	81.7667	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	113522831	113525375	-84770184	-	MER89-int	LTR	ERV1	0	6801	4163	2
chr3	113906843	113906844	chunk0128_389_1	8.27376	AR_DHT_Control	chr3	113905996	113907112	-84388447	+	Tigger3b	DNA	TcMar-Tigger	61	1231	0	2
chr3	113975702	113975703	chunk0128_395_1	15.00598	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	113975484	113975844	-84319715	-	L2a	LINE	L2	0	3426	2936	2
chr3	114104579	114104580	chunk0128_400_1	13.9716	AR_DHT_Control	chr3	114104485	114105141	-84190418	+	Tigger3b	DNA	TcMar-Tigger	5	654	-577	2
chr3	114665160	114665161	chunk0128_411_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	114665103	114665467	-83630092	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	2
chr3	114711813	114711814	chunk0128_413_1	11.27974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	114711751	114711831	-83583728	+	L2a	LINE	L2	3346	3425	-1	2
chr3	114844751	114844752	chunk0128_418_1	5.77762	AR_DHT_Control	chr3	114844553	114845107	-83450452	-	L1MC	LINE	L1	-515	5664	5112	2
chr3	115011735	115011736	chunk0128_439_1	175.2513	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	115010158	115013725	-83281834	+	L1MA3	LINE	L1	1492	5107	-2458	2
chr3	115126380	115126381	chunk0128_447_1	7.36432	AR_DHT_Control	chr3	115125964	115126851	-83168708	+	L1ME3F	LINE	L1	5254	6151	-92	2
chr3	115206021	115206022	chunk0128_449_1	14.47029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	115205924	115206449	-83089110	-	L2c	LINE	L2	0	3387	2875	2
chr3	116483275	116483276	chunk0129_10_1	47.9897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	116481667	116483523	-81812036	+	L1MC1	LINE	L1	4007	5866	-467	2
chr3	116501824	116501825	chunk0129_12_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	116500512	116501955	-81793604	+	L1PA14	LINE	L1	4069	5480	-681	2
chr3	117034338	117034339	chunk0129_14_1	10.5201	AR_DHT_Control	chr3	117034305	117034571	-81260988	+	L1ME1	LINE	L1	5744	6025	-1970	2
chr3	117076417	117076418	chunk0129_20_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117076262	117076440	-81219119	-	MIR	SINE	MIR	-33	229	50	2
chr3	117223366	117223367	chunk0129_30_1	13.6548	AR_DHT_Control	chr3	117223173	117223418	-81072141	-	L1ME3Cz	LINE	L1	-3	994	724	2
chr3	117263381	117263382	chunk0129_34_1	172.8608	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	117263264	117263468	-81032091	+	CR1_Mam	LINE	CR1	720	912	-1292	2
chr3	117345807	117345808	chunk0129_37_1	28.8006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	117345785	117345831	-80949728	+	(TTTCC)n	Simple_repeat	Simple_repeat	1	46	0	2
chr3	117444215	117444216	chunk0129_48_1	26.9214	AR_DHT_Control	chr3	117444179	117444224	-80851335	+	L2a	LINE	L2	3345	3391	-35	2
chr3	117508029	117508030	chunk0129_57_1	4.96282	AR_DHT_Control	chr3	117507559	117508065	-80787494	-	MER4D	LTR	ERV1	0	903	392	2
chr3	117563380	117563381	chunk0129_58_1	10.8743	AR_DHT_Control	chr3	117563099	117563428	-80732131	-	L2a	LINE	L2	-206	3220	2866	2
chr3	117575753	117575754	chunk0129_60_1	45.9662	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117575715	117576271	-80719288	-	L1MA4A	LINE	L1	-6	6297	5723	2
chr3	117591955	117591956	chunk0129_62_1	16.63759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117590273	117592429	-80703130	-	L1MC3	LINE	L1	0	7785	5596	2
chr3	117610274	117610275	chunk0129_66_1	295.6333	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	117610141	117610562	-80684997	+	MER70A	LTR	ERVL	1	431	-41	2
chr3	117618365	117618366	chunk0129_67_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117618108	117618389	-80677170	+	L1PA16	LINE	L1	5885	6166	0	2
chr3	117677243	117677244	chunk0129_70_1	7.72091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117677071	117677285	-80618274	-	MIRb	SINE	MIR	-6	262	21	2
chr3	117854043	117854044	chunk0129_78_1	6.73207	AR_DHT_Control	chr3	117853911	117854175	-80441384	-	MamSINE1	SINE	tRNA-RTE	-21	269	3	2
chr3	117875659	117875660	chunk0129_79_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	117875350	117875923	-80419636	+	LTR24C	LTR	ERV1	1	635	0	2
chr3	118163348	118163349	chunk0129_82_1	7.91804	AR_DHT_Control	chr3	118162603	118163477	-80132082	+	L1P2	LINE	L1	1	847	-5337	2
chr3	118430367	118430368	chunk0129_83_1	26.4605	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	118430147	118430369	-79865190	-	L1PA15	LINE	L1	-298	5867	5644	2
chr3	118430367	118430368	chunk0129_83_1	26.4605	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	118430367	118430564	-79864995	-	L1PA15	LINE	L1	-811	5369	5173	2
chr3	119130978	119130979	chunk0129_88_1	7.36432	AR_DHT_Control	chr3	119130083	119136227	-79159332	+	L1PA6	LINE	L1	1	6154	0	2
chr3	119257814	119257815	chunk0129_89_1	6.54035	AR_DHT_Control	chr3	119257537	119257998	-79037561	-	LTR2	LTR	ERV1	0	463	1	2
chr3	119279130	119279131	chunk0129_90_1	5.99997	AR_DHT_Control	chr3	119278937	119279180	-79016379	-	MIRb	SINE	MIR	-1	267	25	2
chr3	119357365	119357366	chunk0129_92_1	13.5952	AR_DHT_Control	chr3	119357155	119357488	-78938071	-	L2b	LINE	L2	-155	3232	2911	2
chr3	119413672	119413673	chunk0129_93_1	14.2981	AR_DHT_Control	chr3	119413486	119413707	-78881852	+	MIRb	SINE	MIR	1	248	-20	2
chr3	119463870	119463871	chunk0129_94_1	14.50027	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	119463820	119464016	-78831543	-	MIRc	SINE	MIR	-23	245	19	2
chr3	119536842	119536843	chunk0129_99_1	72.38647	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	119536748	119537081	-78758478	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	2
chr3	119575660	119575661	chunk0129_100_1	24.63114	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	119575600	119575661	-78719898	+	L2a	LINE	L2	3355	3414	-12	2
chr3	119602481	119602482	chunk0129_104_1	37.4115	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	119601620	119602599	-78692960	-	L1M5	LINE	L1	-1927	4219	3194	2
chr3	119790707	119790708	chunk0129_113_1	18.00272	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	119789930	119790722	-78504837	-	L1MB2	LINE	L1	-5	6166	5328	2
chr3	119798201	119798202	chunk0129_116_1	198.3654	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	119797635	119798387	-78497172	-	L1MEg	LINE	L1	-4460	1624	781	2
chr3	119859171	119859172	chunk0129_123_1	16.65816	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	119856893	119859249	-78436310	-	Tigger1	DNA	TcMar-Tigger	0	2418	3	2
chr3	119941783	119941784	chunk0129_128_1	14.23418	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	119941690	119941909	-78353650	-	MIRb	SINE	MIR	0	268	25	2
chr3	119982029	119982030	chunk0129_131_1	100.6572	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	119981229	119987333	-78308226	+	L1PA6	LINE	L1	7	6148	-6	2
chr3	120433616	120433617	chunk0129_140_1	8.27423	AR_DHT_Control	chr3	120433486	120434264	-77861295	-	L2a	LINE	L2	-4	3422	2566	2
chr3	120484847	120484848	chunk0129_145_1	6.33484	AR_DHT_Control	chr3	120484812	120484854	-77810705	+	(AC)n	Simple_repeat	Simple_repeat	1	42	0	2
chr3	120492319	120492320	chunk0129_146_1	10.60169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	120492068	120495825	-77799734	+	HERVIP10B3-int	LTR	ERV1	3825	7603	0	2
chr3	120554477	120554478	chunk0129_150_1	24.37764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	120554335	120554705	-77740854	+	L2c	LINE	L2	3023	3375	-12	2
chr3	120591394	120591395	chunk0129_155_1	8.9624	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	120590150	120591678	-77703881	+	L1M5	LINE	L1	3196	4759	-1387	2
chr3	120661442	120661443	chunk0129_158_1	28.5148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	120661378	120661471	-77634088	-	L2b	LINE	L2	0	3375	3270	2
chr3	120743561	120743562	chunk0129_169_1	10.788	AR_DHT_Control	chr3	120743507	120743845	-77551714	-	L2c	LINE	L2	-49	3326	2951	2
chr3	120802406	120802407	chunk0129_172_1	17.9487	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	120801784	120802493	-77493066	+	L3	LINE	CR1	3195	3927	-172	2
chr3	120858575	120858576	chunk0129_173_1	37.47969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	120858379	120858681	-77436878	+	L2a	LINE	L2	3108	3419	-7	2
chr3	120966647	120966648	chunk0129_182_1	61.2012	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	120961274	120967428	-77328131	-	L1PA6	LINE	L1	0	6154	9	2
chr3	121017495	121017496	chunk0129_183_1	28.6876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121016701	121017802	-77277757	+	L1MCb	LINE	L1	3822	4926	-1638	2
chr3	121027683	121027684	chunk0129_185_1	10.1791	AR_DHT_Control	chr3	121027399	121027856	-77267703	-	MLT1D	LTR	ERVL-MaLR	-71	434	1	2
chr3	121109615	121109616	chunk0129_188_1	8.27376	AR_DHT_Control	chr3	121106242	121112620	-77182939	-	L1PA10	LINE	L1	-1	6352	5	2
chr3	121230265	121230266	chunk0129_190_1	103.3755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	121229853	121230450	-77065109	-	MER101-int	LTR	ERV1	-4678	1961	1383	2
chr3	121362683	121362684	chunk0129_197_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	121360073	121363852	-76931707	-	L1MA1	LINE	L1	-3672	3893	16	2
chr3	121430698	121430699	chunk0129_198_1	11.4186	AR_DHT_Control	chr3	121430209	121430709	-76864850	-	MLT1D	LTR	ERVL-MaLR	0	505	1	2
chr3	121640374	121640375	chunk0129_201_1	6.38514	AR_DHT_Control	chr3	121640297	121640642	-76654917	+	L1MEi	LINE	L1	617	962	-6141	2
chr3	121707760	121707761	chunk0129_203_1	37.4702	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121707735	121707894	-76587665	+	MER58A	DNA	hAT-Charlie	56	224	0	2
chr3	121709388	121709389	chunk0129_205_1	8.27403	AR_DHT_Control	chr3	121708752	121710480	-76585079	+	L1ME2z	LINE	L1	2171	4036	-2283	2
chr3	121733421	121733422	chunk0129_206_1	38.5328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121733310	121734108	-76561451	+	L1MC3	LINE	L1	4325	5210	-936	2
chr3	121739948	121739949	chunk0129_208_1	23.10361	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121739660	121740376	-76555183	+	L1MD2	LINE	L1	5590	6332	-27	2
chr3	121799984	121799985	chunk0129_213_1	7.82111	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121799880	121800008	-76495551	+	LTR37B	LTR	ERV1	8	154	-314	2
chr3	121814192	121814193	chunk0129_215_1	158.15023	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121810991	121817438	-76478121	+	L1PA8	LINE	L1	6	6487	0	2
chr3	121837748	121837749	chunk0129_218_1	15.825	AR_DHT_Control	chr3	121837670	121838011	-76457548	+	CR1_Mam	LINE	CR1	1204	1570	-634	2
chr3	121845063	121845064	chunk0129_219_1	79.0222	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121844779	121845161	-76450398	-	L2c	LINE	L2	-12	3375	2955	2
chr3	121907818	121907819	chunk0129_226_1	14.0237	AR_DHT_Control	chr3	121902360	121908514	-76387045	-	L1PA6	LINE	L1	-1	6153	6	2
chr3	121942731	121942732	chunk0129_227_1	6.3126	AR_DHT_Control	chr3	121942716	121942845	-76352714	-	MER103C	DNA	hAT-Charlie	-46	251	107	2
chr3	121958669	121958670	chunk0129_228_1	6.93824	AR_DHT_Control	chr3	121958343	121958818	-76336741	+	L1M1	LINE	L1	2702	3184	-4381	2
chr3	121961568	121961569	chunk0129_229_1	81.16296	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	121959115	121961859	-76333700	+	L1M1	LINE	L1	3180	5885	-1680	2
chr3	121969102	121969103	chunk0129_231_1	7.35552	AR_DHT_Control	chr3	121969014	121969456	-76326103	-	MER34B	LTR	ERV1	-90	475	1	2
chr3	121970262	121970263	chunk0129_233_1	153.65807	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr3	121969513	121970481	-76325078	-	MER31-int	LTR	ERV1	-161	5195	4011	2
chr3	121980253	121980254	chunk0129_235_1	4.51289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	121980229	121980499	-76315060	+	HAL1b	LINE	L1	1847	2134	-287	2
chr3	122004353	122004354	chunk0129_236_1	45.8951	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122004343	122004566	-76290993	-	MIR	SINE	MIR	0	262	12	2
chr3	122073379	122073380	chunk0129_242_1	63.1731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122073156	122073481	-76222078	-	L1MC2	LINE	L1	-826	5518	5192	2
chr3	122125459	122125460	chunk0129_249_1	22.78159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122124727	122125939	-76169620	-	HAL1	LINE	L1	-627	1880	517	2
chr3	122203063	122203064	chunk0129_250_1	24.76025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122202507	122203277	-76092282	-	L1ME3E	LINE	L1	-819	5327	4519	2
chr3	122203686	122203687	chunk0129_251_1	5.07296	AR_DHT_Control	chr3	122203286	122203861	-76091698	-	Tigger3c	DNA	TcMar-Tigger	0	602	33	2
chr3	122266482	122266483	chunk0129_252_1	23.8687	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122266419	122266541	-76029018	-	AluSx3	SINE	Alu	-2	309	188	2
chr3	122399060	122399061	chunk0129_258_1	254.48233	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	122398932	122399323	-75896236	-	L1PREC2	LINE	L1	-2	6158	5770	2
chr3	122443953	122443954	chunk0129_261_1	6.02617	AR_DHT_Control	chr3	122443535	122444603	-75850956	-	MER11B	LTR	ERVK	-4	1232	5	2
chr3	122444670	122444671	chunk0129_262_1	21.19315	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122444603	122445371	-75850188	+	L1PA6	LINE	L1	703	1469	-4715	2
chr3	122510620	122510621	chunk0129_266_1	12.0416	AR_DHT_Control	chr3	122509826	122510827	-75784732	+	HAL1	LINE	L1	1287	2439	-68	2
chr3	122651773	122651774	chunk0129_268_1	312.4768	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122650966	122653820	-75641739	+	L1PA6	LINE	L1	1	2778	-3368	2
chr3	122746263	122746264	chunk0129_271_1	21.0435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122746198	122746476	-75549083	+	L1M4	LINE	L1	4493	4826	-1320	2
chr3	122777294	122777295	chunk0129_273_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	122777285	122777371	-75518188	+	MamRTE1	LINE	RTE-BovB	3648	3733	-79	2
chr3	122846491	122846492	chunk0129_274_1	6.98475	AR_DHT_Control	chr3	122846385	122846856	-75448703	-	L1MEg	LINE	L1	-351	6047	5531	2
chr3	123068808	123068809	chunk0129_278_1	124.89	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	123068662	123069013	-75226546	-	L2b	LINE	L2	-5	3370	3044	2
chr3	123185101	123185102	chunk0129_282_1	6.89429	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	123184973	123185250	-75110309	-	MER1B	DNA	hAT-Charlie	0	339	1	2
chr3	123238931	123238932	chunk0129_284_1	20.5987	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	123238869	123239019	-75056540	-	L1MC5a	LINE	L1	0	2777	2630	2
chr3	123270119	123270120	chunk0129_285_1	28.9821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	123269931	123270243	-75025316	+	L1MC4a	LINE	L1	7562	7876	-6	2
chr3	123338487	123338488	chunk0129_289_1	7.38582	AR_DHT_Control	chr3	123338380	123338500	-74957059	-	Mam_R4	LINE	Dong-R4	-303	3506	3383	2
chr3	123504341	123504342	chunk0129_292_1	63.1764	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	123504330	123504441	-74791118	+	L2c	LINE	L2	3285	3387	0	2
chr3	123597777	123597778	chunk0129_294_1	17.09085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	123597563	123597922	-74697637	-	LTR40A1	LTR	ERVL	-191	393	1	2
chr3	123602425	123602426	chunk0129_295_1	6.3364	AR_DHT_Control	chr3	123602292	123602600	-74692959	+	LTR57	LTR	ERVL	91	404	-7	2
chr3	123680841	123680842	chunk0129_305_1	8.80746	AR_DHT_Control	chr3	123680822	123680843	-74614716	+	(TTGT)n	Simple_repeat	Simple_repeat	1	22	0	2
chr3	123766155	123766156	chunk0129_308_1	12.811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	123766098	123766198	-74529361	-	L1M5	LINE	L1	-1286	4860	4761	2
chr3	123874842	123874843	chunk0129_311_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	123873832	123875660	-74419899	+	L1ME1	LINE	L1	4318	6157	-22	2
chr3	123919281	123919282	chunk0129_312_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	123919245	123921647	-74373912	+	L1MA7	LINE	L1	1159	3330	-3515	2
chr3	123963298	123963299	chunk0129_314_1	64.2115	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	123963160	123963467	-74332092	+	MER58B	DNA	hAT-Charlie	1	340	-1	2
chr3	123985161	123985162	chunk0129_316_1	10.1096	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	123985023	123985453	-74310106	+	Charlie17	DNA	hAT-Charlie	3	457	-2459	2
chr3	124027070	124027071	chunk0129_317_1	8.27376	AR_DHT_Control	chr3	124026203	124027105	-74268454	-	L1ME1	LINE	L1	-1	6178	5258	2
chr3	124245253	124245254	chunk0129_323_1	48.819	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	124244849	124245873	-74049686	-	L1MA4	LINE	L1	0	6300	5299	2
chr3	124521243	124521244	chunk0129_327_1	23.42632	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	124521210	124521351	-73774208	-	L2c	LINE	L2	0	3426	3259	2
chr3	124591514	124591515	chunk0129_330_1	8.11543	AR_DHT_Control	chr3	124591513	124591684	-73703875	-	L2b	LINE	L2	-1	3425	3222	2
chr3	124607337	124607338	chunk0129_334_1	11.2223	AR_DHT_Control	chr3	124606665	124607530	-73688029	+	L1ME3G	LINE	L1	1	896	-28	2
chr3	124854190	124854191	chunk0129_347_1	11.6192	AR_DHT_Control	chr3	124854153	124854776	-73440783	+	L1MB7	LINE	L1	5577	6165	-19	2
chr3	124920932	124920933	chunk0129_354_1	6.9834	AR_DHT_Control	chr3	124920904	124921033	-73374526	+	MIRb	SINE	MIR	4	148	-120	2
chr3	125348877	125348878	chunk0129_362_1	96.97863	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	125348513	125349694	-72945865	+	L1M3	LINE	L1	4382	5608	-558	2
chr3	125513879	125513880	chunk0129_372_1	43.4282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	125513842	125514190	-72781369	-	MLT1A0	LTR	ERVL-MaLR	-11	354	1	2
chr3	125622577	125622578	chunk0129_373_1	16.46448	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	125622336	125622621	-72672938	-	Tigger16b	DNA	TcMar-Tigger	0	336	62	2
chr3	125652417	125652418	chunk0129_375_1	4.06036	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	125652293	125652718	-72642841	+	MLT2F	LTR	ERVL	1	511	-152	2
chr3	126021825	126021826	chunk0129_378_1	44.6621	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	126021732	126022034	-72273525	-	LTR23	LTR	ERV1	-38	399	86	2
chr3	126076888	126076889	chunk0129_380_1	4.09301	AR_DHT_Control	chr3	126076589	126076982	-72218577	-	L1ME3B	LINE	L1	-76	6166	5747	2
chr3	126472689	126472690	chunk0129_396_1	8.23158	AR_DHT_Control	chr3	126472481	126472735	-71822824	-	MER106B	DNA	hAT-Charlie	-708	351	57	2
chr3	126652910	126652911	chunk0129_400_1	4.63256	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	126652485	126653307	-71642252	+	MER6	DNA	TcMar-Tigger	1	865	0	2
chr3	126732538	126732539	chunk0129_402_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	126732166	126732686	-71562873	-	L1ME4a	LINE	L1	-18	6106	5603	2
chr3	126768389	126768390	chunk0129_403_1	8.95279	AR_DHT_Control	chr3	126768060	126768528	-71527031	+	MSTA	LTR	ERVL-MaLR	1	428	0	2
chr3	126772708	126772709	chunk0129_404_1	5.47663	AR_DHT_Control	chr3	126772381	126773238	-71522321	-	L1PA15	LINE	L1	-3638	3035	2159	2
chr3	126845254	126845255	chunk0129_406_1	6.88185	AR_DHT_Control	chr3	126845135	126845444	-71450115	-	L1MCc	LINE	L1	-4057	2965	2651	2
chr3	126942621	126942622	chunk0129_408_1	55.3043	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	126941621	126943073	-71352486	-	L1MC4	LINE	L1	-2	8040	6460	2
chr3	126956604	126956605	chunk0129_411_1	13.6438	AR_DHT_Control	chr3	126956600	126956628	-71338931	+	(GA)n	Simple_repeat	Simple_repeat	1	28	0	2
chr3	127052067	127052068	chunk0129_414_1	5.0408	AR_DHT_Control	chr3	127051971	127052086	-71243473	+	MLT1H	LTR	ERVL-MaLR	75	191	-358	2
chr3	127113197	127113198	chunk0129_418_1	48.47941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	127113100	127113205	-71182354	+	LTR85b	LTR	Gypsy?	378	484	-300	2
chr3	127142213	127142214	chunk0129_420_1	28.572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	127142164	127142270	-71153289	+	MIR1_Amn	SINE	MIR	31	146	-84	2
chr3	127339493	127339494	chunk0129_424_1	4.81216	AR_DHT_Control	chr3	127338714	127339544	-70956015	+	(AC)n	Simple_repeat	Simple_repeat	1	832	0	2
chr3	127553978	127553979	chunk0129_429_1	7.29426	AR_DHT_Control	chr3	127553853	127554178	-70741381	-	L1ME4b	LINE	L1	-360	5764	5604	2
chr3	127613562	127613563	chunk0129_433_1	12.5575	AR_DHT_Control	chr3	127613383	127613599	-70681960	-	MIR	SINE	MIR	-1	267	4	2
chr3	127817617	127817618	chunk0129_437_1	21.4985	AR_DHT_Control	chr3	127817497	127817627	-70477932	-	L2c	LINE	L2	-5	3382	3248	2
chr3	128026551	128026552	chunk0129_439_1	23.9459	AR_DHT_Control	chr3	128026116	128027135	-70268424	+	HAL1	LINE	L1	1442	2506	-1	2
chr3	128127165	128127166	chunk0129_446_1	28.68375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	128126791	128127202	-70168357	+	MLT1K	LTR	ERVL-MaLR	1	466	-129	2
chr3	128146690	128146691	chunk0129_447_1	6.69935	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	128146270	128146865	-70148694	+	(TG)n	Simple_repeat	Simple_repeat	1	595	0	2
chr3	128235678	128235679	chunk0129_450_1	24.5425	AR_DHT_Control	chr3	128235673	128235845	-70059714	-	L1ME3G	LINE	L1	-362	562	392	2
chr3	128236900	128236901	chunk0129_451_1	120.5666	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	128236696	128237048	-70058511	+	L2a	LINE	L2	3034	3406	-20	2
chr3	128241802	128241803	chunk0129_453_1	52.2039	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	128241753	128241939	-70053620	-	MIR	SINE	MIR	-2	260	73	2
chr3	128286074	128286075	chunk0129_458_1	74.5616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	128285994	128286205	-70009354	-	L1ME3C	LINE	L1	-169	5954	5768	2
chr3	128335763	128335764	chunk0130_3_1	16.50494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	128335147	128336032	-69959527	-	L2a	LINE	L2	-23	3403	2379	2
chr3	128346780	128346781	chunk0130_5_1	46.6618	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	128346202	128346994	-69948565	-	Cheshire	DNA	hAT-Charlie	-1545	875	2	2
chr3	128402566	128402567	chunk0130_16_1	5.20051	AR_DHT_Control	chr3	128402477	128402610	-69892949	+	MIR	SINE	MIR	8	151	-57	2
chr3	128423727	128423728	chunk0130_17_1	23.2522	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	128423504	128423856	-69871703	+	L1MB7	LINE	L1	5818	6183	-1	2
chr3	128623782	128623783	chunk0130_20_1	136.9356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	128623665	128623989	-69671570	+	L1MC4	LINE	L1	7592	7903	-139	2
chr3	128671468	128671469	chunk0130_21_1	8.27376	AR_DHT_Control	chr3	128671456	128671830	-69623729	-	L1MC1	LINE	L1	-1	6332	5967	2
chr3	128708070	128708071	chunk0130_24_1	7.72091	AR_DHT_Control	chr3	128708060	128708291	-69587268	+	L1M5	LINE	L1	4675	4896	-1250	2
chr3	128776094	128776095	chunk0130_25_1	105.2385	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	128775765	128776268	-69519291	-	L1MA8	LINE	L1	-5	6286	5783	2
chr3	129067755	129067756	chunk0130_36_1	30.7246	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	129067539	129068844	-69226715	-	LTR12C	LTR	ERV1	0	1579	2	2
chr3	129205366	129205367	chunk0130_43_1	4.29711	AR_DHT_Control	chr3	129205338	129205448	-69090111	-	Tigger12c	DNA	TcMar-Tigger	-622	112	3	2
chr3	129509909	129509910	chunk0130_53_1	25.8175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	129509853	129509979	-68785580	+	MIR	SINE	MIR	99	236	-26	2
chr3	129674090	129674091	chunk0130_56_1	37.3815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	129673867	129674177	-68621382	+	Tigger3a	DNA	TcMar-Tigger	1	328	-20	2
chr3	129781323	129781324	chunk0130_58_1	8.64577	AR_DHT_Control	chr3	129781299	129781374	-68514185	-	L2a	LINE	L2	0	3426	3336	2
chr3	129815305	129815306	chunk0130_61_1	36.35305	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	129815233	129816741	-68478818	+	L1MA4	LINE	L1	6034	7585	-134	2
chr3	129841109	129841110	chunk0130_62_1	6.28518	AR_DHT_Control	chr3	129840883	129841305	-68454254	+	THE1D-int	LTR	ERVL-MaLR	1	422	-1229	2
chr3	129908511	129908512	chunk0130_67_1	127.3346	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	129908278	129908832	-68386727	-	LTR35A	LTR	ERV1	-4	543	1	2
chr3	130243322	130243323	chunk0130_74_1	11.3499	AR_DHT_Control	chr3	130242869	130243791	-68051768	+	L2a	LINE	L2	2476	3424	-2	2
chr3	130473596	130473597	chunk0130_75_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130473539	130474031	-67821528	+	LTR3B_	LTR	ERVK	1	499	0	2
chr3	130494855	130494856	chunk0130_76_1	10.1791	AR_DHT_Control	chr3	130494576	130494871	-67800688	+	AluSz6	SINE	Alu	1	297	-15	2
chr3	130538495	130538496	chunk0130_77_1	18.24538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	130538464	130538714	-67756845	-	MIR	SINE	MIR	-3	259	4	2
chr3	130685203	130685204	chunk0130_81_1	15.94926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130685135	130685407	-67610152	+	L1MA7	LINE	L1	5990	6290	-1	2
chr3	130697868	130697869	chunk0130_84_1	35.8441	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130697538	130699707	-67595852	-	L1MB7	LINE	L1	-5131	2386	17	2
chr3	130761866	130761867	chunk0130_87_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	130761550	130764254	-67531305	+	L1MA3	LINE	L1	27	2784	-4781	2
chr3	130778089	130778090	chunk0130_88_1	9.68843	AR_DHT_Control	chr3	130777572	130778118	-67517441	+	L1MA9	LINE	L1	5751	6274	-38	2
chr3	130796715	130796716	chunk0130_89_1	27.91466	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	130796562	130797091	-67498468	-	L1M4c	LINE	L1	-3500	4059	3510	2
chr3	130812244	130812245	chunk0130_92_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130812142	130812467	-67483092	-	L2a	LINE	L2	-4	3422	3104	2
chr3	130888167	130888168	chunk0130_98_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	130885939	130888933	-67406626	-	L1M1	LINE	L1	-4517	3048	20	2
chr3	130905611	130905612	chunk0130_99_1	6.67113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	130904109	130905699	-67389860	-	L1MC4a	LINE	L1	-16	7866	6181	2
chr3	130906910	130906911	chunk0130_100_1	9.77812	AR_DHT_Control	chr3	130906829	130906961	-67388598	-	L1ME1	LINE	L1	-1305	4841	4716	2
chr3	131083495	131083496	chunk0130_102_1	21.73623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	131083487	131083583	-67211976	-	UCON80	DNA	hAT?	-6	136	40	2
chr3	131086557	131086558	chunk0130_103_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	131085741	131086603	-67208956	-	L1MC4a	LINE	L1	-90	7792	6887	2
chr3	131098873	131098874	chunk0130_104_1	11.2863	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	131098808	131100314	-67195245	-	L1P4a	LINE	L1	-823	6758	5242	2
chr3	131158242	131158243	chunk0130_106_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	131157576	131159483	-67136076	+	L1PA13	LINE	L1	11	1953	-4832	2
chr3	131164253	131164254	chunk0130_108_1	17.62697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	131164180	131164379	-67131180	-	MER63A	DNA	hAT-Blackjack	0	210	2	2
chr3	131394521	131394522	chunk0130_114_1	20.5826	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	131394416	131394588	-66900971	+	MIRb	SINE	MIR	46	253	-15	2
chr3	131422133	131422134	chunk0130_117_1	25.1881	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	131421969	131422461	-66873098	+	MLT1H	LTR	ERVL-MaLR	12	537	-12	2
chr3	131488544	131488545	chunk0130_121_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	131488494	131488617	-66806942	-	L2c	LINE	L2	-3	3384	3266	2
chr3	131803779	131803780	chunk0130_130_1	23.4998	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	131803712	131803859	-66491700	+	L1ME4c	LINE	L1	436	584	-246	2
chr3	132180461	132180462	chunk0130_134_1	5.73666	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	132180363	132180548	-66115011	-	MER91B	DNA	hAT-Tip100	-9	181	1	2
chr3	132219141	132219142	chunk0130_136_1	51.32372	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	132218896	132219492	-66076067	-	LTR24C	LTR	ERV1	0	635	1	2
chr3	132227149	132227150	chunk0130_137_1	13.3321	AR_DHT_Control	chr3	132227025	132227377	-66068182	-	L1PA10	LINE	L1	-4	6164	5803	2
chr3	132248844	132248845	chunk0130_142_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	132248761	132248928	-66046631	-	Zaphod3	DNA	hAT-Tip100	-2446	177	2	2
chr3	132257724	132257725	chunk0130_144_1	28.6609	AR_DHT_Control	chr3	132257340	132257862	-66037697	+	L1MB7	LINE	L1	5615	6130	-54	2
chr3	132273756	132273757	chunk0130_148_1	29.82789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	132273471	132273816	-66021743	+	L2a	LINE	L2	3070	3422	-4	2
chr3	132304047	132304048	chunk0130_150_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	132303681	132309950	-65985609	+	Harlequin-int	LTR	ERV1	635	6895	-1	2
chr3	132655560	132655561	chunk0130_160_1	13.6122	AR_DHT_Control	chr3	132655147	132655811	-65639748	+	L2a	LINE	L2	2638	3401	-25	2
chr3	132662415	132662416	chunk0130_162_1	3.85446	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	132662358	132662503	-65633056	-	L2c	LINE	L2	-22	3365	3211	2
chr3	132714171	132714172	chunk0130_164_1	24.2577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	132713981	132714348	-65581211	-	MER58B	DNA	hAT-Charlie	-4	337	1	2
chr3	132988326	132988327	chunk0130_165_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	132987940	132988486	-65307073	-	MLT1G1	LTR	ERVL-MaLR	-5	574	1	2
chr3	133015841	133015842	chunk0130_166_1	15.27631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	133015308	133015977	-65279582	-	L1MA1	LINE	L1	-4	6298	5628	2
chr3	133343550	133343551	chunk0130_174_1	4.93619	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	133343060	133343839	-64951720	+	L1MD3	LINE	L1	5324	6192	-1803	2
chr3	133499341	133499342	chunk0130_183_1	21.2992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	133499309	133499350	-64796209	+	(GT)n	Simple_repeat	Simple_repeat	1	42	0	2
chr3	133505779	133505780	chunk0130_186_1	19.869	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	133505618	133505892	-64789667	-	MER112	DNA	hAT-Charlie	0	261	2	2
chr3	133527160	133527161	chunk0130_187_1	14.6688	AR_DHT_Control	chr3	133527154	133527226	-64768333	+	MIRc	SINE	MIR	190	267	-1	2
chr3	133642569	133642570	chunk0130_196_1	125.72362	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	133642381	133643025	-64652534	-	L1MC5	LINE	L1	-430	8874	8205	2
chr3	133711422	133711423	chunk0130_198_1	13.197	AR_DHT_Control	chr3	133710742	133712247	-64583312	+	L2b	LINE	L2	1760	3335	-40	2
chr3	133760123	133760124	chunk0130_202_1	8.51012	AR_DHT_Control	chr3	133760044	133760210	-64535349	+	MER21C	LTR	ERVL	432	597	-341	2
chr3	133863500	133863501	chunk0130_207_1	103.61511	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	133863472	133863757	-64431802	-	MER103C	DNA	hAT-Charlie	-15	282	14	2
chr3	133994273	133994274	chunk0130_217_1	46.16317	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	133994189	133994292	-64301267	-	MIRb	SINE	MIR	-49	213	111	2
chr3	134236781	134236782	chunk0130_223_1	53.4241	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	134236309	134236805	-64058754	+	L1M4	LINE	L1	4344	4876	-1270	2
chr3	134302901	134302902	chunk0130_226_1	13.6548	AR_DHT_Control	chr3	134302690	134303076	-63992483	+	MER47B	DNA	TcMar-Tigger	4	418	0	2
chr3	134375280	134375281	chunk0130_227_1	5.33602	AR_DHT_Control	chr3	134375238	134375451	-63920108	-	MIRb	SINE	MIR	-1	267	41	2
chr3	134445731	134445732	chunk0130_230_1	36.61456	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	134444572	134446043	-63849516	-	L1ME1	LINE	L1	-4804	1596	45	2
chr3	134699541	134699542	chunk0130_236_1	58.0512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	134699537	134699872	-63595687	+	L2b	LINE	L2	2099	2495	-924	2
chr3	135289894	135289895	chunk0130_241_1	13.5024	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	135289886	135289927	-63005632	+	(TG)n	Simple_repeat	Simple_repeat	1	41	0	2
chr3	135636385	135636386	chunk0130_246_1	48.82073	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	135636261	135636481	-62659078	+	MER58A	DNA	hAT-Charlie	1	222	-2	2
chr3	135678508	135678509	chunk0130_249_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	135678442	135678569	-62616990	-	HAL1ME	LINE	L1	-1464	1001	871	2
chr3	135786972	135786973	chunk0130_251_1	23.26654	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	135786795	135787068	-62508491	-	L2a	LINE	L2	-1	3425	3077	2
chr3	135856135	135856136	chunk0130_253_1	19.64692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	135855693	135856137	-62439422	+	L1PB	LINE	L1	4858	5245	-901	2
chr3	135908645	135908646	chunk0130_256_1	4.86605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	135907634	135908858	-62386701	-	L3	LINE	CR1	-2709	1390	55	2
chr3	135931103	135931104	chunk0130_257_1	19.1049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	135930982	135931637	-62363922	+	Tigger3b	DNA	TcMar-Tigger	1	658	-573	2
chr3	136141815	136141816	chunk0130_263_1	5.37222	AR_DHT_Control	chr3	136141785	136142212	-62153347	-	L2b	LINE	L2	-699	2720	2209	2
chr3	136182373	136182374	chunk0130_265_1	7.36432	AR_DHT_Control	chr3	136182325	136182669	-62112890	+	L1MEc	LINE	L1	39	403	-5997	2
chr3	136353862	136353863	chunk0130_278_1	23.35529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136353695	136354298	-61941261	+	L1M4b	LINE	L1	2338	3090	-349	2
chr3	136461257	136461258	chunk0130_282_1	6.28518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136460613	136461574	-61833985	+	L1MA4	LINE	L1	4870	5812	-1750	2
chr3	136461987	136461988	chunk0130_283_1	42.8806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136461609	136462789	-61832770	+	L1MA4	LINE	L1	6458	7688	-31	2
chr3	136534375	136534376	chunk0130_286_1	34.8572	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136533791	136535381	-61760178	+	L1MA4A	LINE	L1	4549	6145	-158	2
chr3	136566808	136566809	chunk0130_287_1	30.6378	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136566606	136566949	-61728610	+	L1MC5a	LINE	L1	219	595	-2182	2
chr3	136567779	136567780	chunk0130_289_1	4.49714	AR_DHT_Control	chr3	136567612	136567861	-61727698	+	MIR	SINE	MIR	9	267	-1	2
chr3	136631165	136631166	chunk0130_291_1	35.8874	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136631062	136631734	-61663825	+	L1MC1	LINE	L1	5623	6324	-9	2
chr3	136894039	136894040	chunk0130_294_1	9.02259	AR_DHT_Control	chr3	136893757	136894683	-61400876	-	ERVL-E-int	LTR	ERVL	-406	5261	4171	2
chr3	136925702	136925703	chunk0130_296_1	21.0236	AR_DHT_Control	chr3	136925327	136926183	-61369376	-	L1MD1	LINE	L1	-2	6240	5290	2
chr3	136943825	136943826	chunk0130_297_1	10.1301	AR_DHT_Control	chr3	136943659	136943877	-61351682	-	L2c	LINE	L2	-31	3395	3152	2
chr3	136944953	136944954	chunk0130_299_1	15.64984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	136944881	136945022	-61350537	-	L2a	LINE	L2	-5	3421	3275	2
chr3	136976686	136976687	chunk0130_302_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	136975636	136977211	-61318348	-	L1MA4A	LINE	L1	-5322	2244	720	2
chr3	136993650	136993651	chunk0130_307_1	8.42402	AR_DHT_Control	chr3	136993425	136993713	-61301846	-	L1PA6	LINE	L1	-4	6150	5862	2
chr3	137059749	137059750	chunk0130_311_1	9.23066	AR_DHT_Control	chr3	137059563	137059755	-61235804	+	MER2B	DNA	TcMar-Tigger	1	207	-129	2
chr3	137071558	137071559	chunk0130_312_1	5.55081	AR_DHT_Control	chr3	137071315	137071740	-61223819	+	MLT1O	LTR	ERVL-MaLR	92	527	-15	2
chr3	137374215	137374216	chunk0130_316_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	137372109	137377745	-60917814	-	L1PA7	LINE	L1	-795	5666	10	2
chr3	138201942	138201943	chunk0130_326_1	85.75901	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	138201758	138202015	-60093544	+	L2c	LINE	L2	3083	3349	-38	2
chr3	138431492	138431493	chunk0130_336_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	138431260	138431501	-59864058	+	L2a	LINE	L2	3152	3394	-32	2
chr3	138609597	138609598	chunk0130_337_1	19.65981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	138609533	138609641	-59685918	+	(CT)n	Simple_repeat	Simple_repeat	1	108	0	2
chr3	138689153	138689154	chunk0130_342_1	6.26854	AR_DHT_Control	chr3	138689120	138689207	-59606352	-	AluSx3	SINE	Alu	-24	287	197	2
chr3	138718662	138718663	chunk0130_344_1	48.8939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	138717533	138718921	-59576638	-	L1PA14	LINE	L1	0	6161	4776	2
chr3	138727705	138727706	chunk0130_348_1	46.34917	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	138727308	138727709	-59567850	+	MLT1E3	LTR	ERVL-MaLR	146	624	0	2
chr3	138729500	138729501	chunk0130_349_1	6.69935	AR_DHT_Control	chr3	138729304	138729893	-59565666	+	MLT2B4	LTR	ERVL	1	559	0	2
chr3	138764921	138764922	chunk0130_351_1	93.8054	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	138764619	138765011	-59530548	+	L2c	LINE	L2	2911	3387	0	2
chr3	138768092	138768093	chunk0130_353_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	138767448	138769230	-59526329	-	MER52A	LTR	ERV1	0	1755	1	2
chr3	138800029	138800030	chunk0130_355_1	27.2135	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	138799977	138800250	-59495309	+	L2b	LINE	L2	2935	3245	-181	2
chr3	138853993	138853994	chunk0130_356_1	12.73	AR_DHT_Control	chr3	138853863	138854018	-59441541	+	L2a	LINE	L2	3262	3410	-16	2
chr3	139064847	139064848	chunk0130_360_1	46.7653	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	139064206	139065104	-59230455	-	L1MC1	LINE	L1	-6	7746	6800	2
chr3	139117238	139117239	chunk0130_363_1	94.35288	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	139117000	139117550	-59178009	+	Tigger3	DNA	TcMar-Tigger	2461	3027	-2	2
chr3	139344448	139344449	chunk0130_372_1	6.5427	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	139344374	139344707	-58950852	-	L2b	LINE	L2	-1	3374	3000	2
chr3	139411406	139411407	chunk0130_373_1	14.70459	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	139410749	139415439	-58880120	-	L1PB2	LINE	L1	-2033	4829	1	2
chr3	140015473	140015474	chunk0130_388_1	26.89291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	140015375	140015692	-58279867	-	L2a	LINE	L2	-667	2752	2427	2
chr3	140093907	140093908	chunk0130_390_1	12.9664	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	140093719	140093972	-58201587	+	MER113A	DNA	hAT-Charlie	43	314	0	2
chr3	140224484	140224485	chunk0130_397_1	6.75904	AR_DHT_Control	chr3	140224386	140224500	-58071059	-	L2a	LINE	L2	-1	3425	3307	2
chr3	140308969	140308970	chunk0130_400_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	140308918	140308992	-57986567	+	MIRc	SINE	MIR	29	96	-172	2
chr3	140332229	140332230	chunk0130_402_1	79.0233	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	140331943	140332367	-57963192	-	L2c	LINE	L2	-1	3386	2910	2
chr3	140603911	140603912	chunk0130_414_1	18.08525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	140603341	140604315	-57691244	-	L1ME1	LINE	L1	-2	6177	5189	2
chr3	140681705	140681706	chunk0130_415_1	9.25272	AR_DHT_Control	chr3	140681630	140682098	-57613461	-	MER90a	LTR	ERV1	0	614	82	2
chr3	140704878	140704879	chunk0130_416_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	140704801	140705181	-57590378	-	MSTB	LTR	ERVL-MaLR	-2	424	3	2
chr3	140815830	140815831	chunk0130_421_1	32.34643	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	140815566	140816628	-57478931	+	L1MC1	LINE	L1	5039	6105	-228	2
chr3	140829882	140829883	chunk0130_423_1	33.7311	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	140828166	140829974	-57465585	+	L2a	LINE	L2	1299	3426	0	2
chr3	141176987	141176988	chunk0130_438_1	16.7908	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	141176288	141177187	-57118372	+	L1MD1	LINE	L1	5351	6238	-4	2
chr3	141204712	141204713	chunk0130_439_1	5.6425	AR_DHT_Control	chr3	141204639	141204900	-57090659	+	MER57A1	LTR	ERV1	1	275	-157	2
chr3	141276386	141276387	chunk0130_444_1	15.23832	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	141276287	141277196	-57018363	-	L1ME3G	LINE	L1	-119	805	60	2
chr3	141377517	141377518	chunk0130_449_1	25.9251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	141377409	141377903	-56917656	+	L1MD2	LINE	L1	5450	5948	-411	2
chr3	141455968	141455969	chunk0130_456_1	15.49797	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	141455758	141456149	-56839410	+	MER115	DNA	hAT-Tip100	279	688	-5	2
chr3	141505425	141505426	chunk0130_460_1	8.46929	AR_DHT_Control	chr3	141505331	141505753	-56789806	-	L2c	LINE	L2	-131	3256	2808	2
chr3	141623463	141623464	chunk0131_1_1	6.48643	AR_DHT_Control	chr3	141623427	141623523	-56672036	+	MER53	DNA	hAT	1	97	-96	2
chr3	141623463	141623464	chunk0131_1_1	6.48643	AR_DHT_Control	chr3	141623446	141623533	-56672026	-	MER53	DNA	hAT	-10	183	97	2
chr3	141703399	141703400	chunk0131_4_1	9.21264	AR_DHT_Control	chr3	141702980	141704079	-56591480	+	L1PB1	LINE	L1	3621	4730	-1416	2
chr3	141717173	141717174	chunk0131_6_1	30.61438	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	141716612	141717830	-56577729	-	L1MEc	LINE	L1	-3399	2920	1626	2
chr3	142061869	142061870	chunk0131_14_1	9.13774	AR_DHT_Control	chr3	142061373	142061886	-56233673	+	MLT2B3	LTR	ERVL	1	515	-39	2
chr3	142068105	142068106	chunk0131_16_1	40.1759	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	142068021	142068469	-56227090	+	L1MC	LINE	L1	4745	5186	-960	2
chr3	142079524	142079525	chunk0131_17_1	22.9464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	142079322	142079965	-56215594	+	L1MA3	LINE	L1	2424	3061	-4504	2
chr3	142128342	142128343	chunk0131_20_1	9.87004	AR_DHT_Control	chr3	142128314	142128454	-56167105	+	HAL1	LINE	L1	535	696	-1811	2
chr3	142133053	142133054	chunk0131_21_1	8.15319	AR_DHT_Control	chr3	142132806	142133150	-56162409	+	L1MEd	LINE	L1	4442	4796	-1350	2
chr3	142325797	142325798	chunk0131_28_1	18.96465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	142325495	142327682	-55967877	-	L1M1	LINE	L1	-830	5316	3078	2
chr3	142327847	142327848	chunk0131_31_1	62.022	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	142327682	142328207	-55967352	-	L1PB4	LINE	L1	-7	6149	5616	2
chr3	142489755	142489756	chunk0131_35_1	87.90036	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	142489378	142490061	-55805498	-	L1ME2	LINE	L1	-77	6087	5318	2
chr3	142621397	142621398	chunk0131_45_1	59.2283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	142621383	142621524	-55674035	+	L1ME4a	LINE	L1	5689	5837	-287	2
chr3	142687812	142687813	chunk0131_48_1	29.0328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	142687563	142687937	-55607622	-	L1MC5	LINE	L1	-18	9286	8901	2
chr3	142697723	142697724	chunk0131_51_1	55.6252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	142697527	142697843	-55597716	-	L1ME3G	LINE	L1	-248	676	353	2
chr3	142844433	142844434	chunk0131_60_1	39.0564	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	142844297	142845691	-55449868	-	L1ME2z	LINE	L1	-3984	2258	1448	2
chr3	142846932	142846933	chunk0131_61_1	8.88943	AR_DHT_Control	chr3	142846499	142847337	-55448222	-	L1ME2z	LINE	L1	-4992	1250	374	2
chr3	142881654	142881655	chunk0131_63_1	53.10415	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	142881448	142881780	-55413779	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr3	142983592	142983593	chunk0131_72_1	303.1477	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	142983505	142984076	-55311483	+	L1ME4b	LINE	L1	285	878	-14	2
chr3	143043319	143043320	chunk0131_76_1	8.0483	AR_DHT_Control	chr3	143043314	143043694	-55251865	+	L2b	LINE	L2	2993	3369	-18	2
chr3	143255685	143255686	chunk0131_79_1	9.20019	AR_DHT_Control	chr3	143255608	143255805	-55039754	+	MIRb	SINE	MIR	8	210	-58	2
chr3	143306597	143306598	chunk0131_85_1	21.23674	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	143306528	143306638	-54988921	+	L2a	LINE	L2	3309	3426	0	2
chr3	143587316	143587317	chunk0131_92_1	13.6782	AR_DHT_Control	chr3	143587172	143587679	-54707880	-	L2a	LINE	L2	0	3426	2831	2
chr3	143594472	143594473	chunk0131_93_1	4.51289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	143594346	143594578	-54700981	-	MIRb	SINE	MIR	-8	260	5	2
chr3	143609256	143609257	chunk0131_96_1	55.4314	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	143609049	143609459	-54686100	+	MamRTE1	LINE	RTE-BovB	2585	3025	-787	2
chr3	143912938	143912939	chunk0131_108_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	143909906	143916378	-54379181	+	L1MA2	LINE	L1	1079	7553	-170	2
chr3	144111501	144111502	chunk0131_122_1	5.60881	AR_DHT_Control	chr3	144111299	144111659	-54183900	+	L1ME4b	LINE	L1	454	826	-66	2
chr3	144169846	144169847	chunk0131_125_1	8.27376	AR_DHT_Control	chr3	144169677	144170024	-54125535	+	HAL1	LINE	L1	1988	2383	-124	2
chr3	144291438	144291439	chunk0131_126_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	144290652	144292743	-54002816	-	L1PA11	LINE	L1	-61	6113	4020	2
chr3	144438203	144438204	chunk0131_133_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	144436000	144438357	-53857202	-	L1PBa	LINE	L1	-3595	3267	644	2
chr3	144727743	144727744	chunk0131_135_1	36.5512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	144727633	144727976	-53567583	+	L1PA16	LINE	L1	5830	6164	-2	2
chr3	144932059	144932060	chunk0131_136_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	144930569	144937470	-53358089	+	L1MA2	LINE	L1	13	7196	-527	2
chr3	145375203	145375204	chunk0131_137_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	145373642	145379381	-52916178	+	L1M1	LINE	L1	16	5870	-1695	2
chr3	145985290	145985291	chunk0131_143_1	70.539	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	145983576	145986090	-52309469	+	L1PA16	LINE	L1	1263	3862	-2987	2
chr3	146019659	146019660	chunk0131_147_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146019271	146019693	-52275866	-	LTR16B2	LTR	ERVL	0	462	4	2
chr3	146115876	146115877	chunk0131_150_1	14.25718	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	146115785	146115930	-52179629	-	MER58A	DNA	hAT-Charlie	-36	188	40	2
chr3	146117702	146117703	chunk0131_152_1	17.8953	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146117690	146117777	-52177782	+	L2a	LINE	L2	3321	3411	-15	2
chr3	146374519	146374520	chunk0131_155_1	10.88655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146374492	146374600	-51920959	+	MIRb	SINE	MIR	142	253	-15	2
chr3	146406361	146406362	chunk0131_157_1	41.8306	AR_DHT_Control	chr3	146405878	146407586	-51887973	-	HERVS71-int	LTR	ERV1	-1192	7786	6070	2
chr3	146429436	146429437	chunk0131_158_1	8.03415	AR_DHT_Control	chr3	146429236	146429621	-51865938	+	MST-int	LTR	ERVL-MaLR	74	461	-1190	2
chr3	146477776	146477777	chunk0131_162_1	9.14609	AR_DHT_Control	chr3	146477111	146482999	-51812560	+	L1PA6	LINE	L1	1	5915	-239	2
chr3	146518149	146518150	chunk0131_167_1	38.13637	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	146518069	146518208	-51777351	+	MLT1I	LTR	ERVL-MaLR	3	149	-262	2
chr3	146871128	146871129	chunk0131_170_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	146870808	146871758	-51423801	-	L1PA16	LINE	L1	-1460	5389	4439	2
chr3	147895358	147895359	chunk0131_185_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	147895093	147895954	-50399605	-	MER49	LTR	ERV1	-50	873	1	2
chr3	148335790	148335791	chunk0131_188_1	14.4671	AR_DHT_Control	chr3	148335436	148336938	-49958621	-	L1ME3F	LINE	L1	-237	6006	4408	2
chr3	148538208	148538209	chunk0131_193_1	6.18774	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	148538037	148538251	-49757308	-	MIRb	SINE	MIR	-17	251	29	2
chr3	148608900	148608901	chunk0131_195_1	8.7059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	148607915	148609640	-49685919	-	L1PB1	LINE	L1	-1	6150	4457	2
chr3	148631541	148631542	chunk0131_198_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	148630638	148637401	-49658158	+	L1MA3	LINE	L1	813	7724	0	2
chr3	148655655	148655656	chunk0131_199_1	9.19742	AR_DHT_Control	chr3	148655322	148656382	-49639177	-	L1PA16	LINE	L1	-770	5396	4393	2
chr3	148830880	148830881	chunk0131_205_1	7.48058	AR_DHT_Control	chr3	148830765	148832174	-49463385	-	L3	LINE	CR1	-1641	2458	997	2
chr3	148915140	148915141	chunk0131_207_1	7.36432	AR_DHT_Control	chr3	148914938	148915195	-49380364	+	L1MEh	LINE	L1	1406	1671	-564	2
chr3	148951807	148951808	chunk0131_210_1	79.8162	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	148951437	148951823	-49343736	-	MER90a	LTR	ERV1	-104	510	94	2
chr3	148979790	148979791	chunk0131_212_1	8.64577	AR_DHT_Control	chr3	148979634	148979837	-49315722	-	L1ME4b	LINE	L1	-252	640	449	2
chr3	149038402	149038403	chunk0131_214_1	8.79298	AR_DHT_Control	chr3	149038395	149038497	-49257062	+	MIR	SINE	MIR	45	145	-117	2
chr3	149157650	149157651	chunk0131_216_1	6.83042	AR_DHT_Control	chr3	149157642	149157768	-49137791	-	L2c	LINE	L2	0	3387	3269	2
chr3	149191567	149191568	chunk0131_220_1	18.7022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	149191498	149191647	-49103912	+	L1MD	LINE	L1	4016	4166	-1980	2
chr3	149192214	149192215	chunk0131_222_1	7.97093	AR_DHT_Control	chr3	149191826	149192578	-49102981	+	L1M6	LINE	L1	4663	5454	-943	2
chr3	149259383	149259384	chunk0131_225_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	149258300	149260747	-49034812	+	L1MA4A	LINE	L1	358	2911	-4655	2
chr3	149356282	149356283	chunk0131_233_1	13.1346	AR_DHT_Control	chr3	149356252	149356293	-48939266	-	MIRc	SINE	MIR	-42	226	184	2
chr3	149389079	149389080	chunk0131_240_1	6.9063	AR_DHT_Control	chr3	149389015	149389085	-48906474	-	MLT1F2	LTR	ERVL-MaLR	-184	443	374	2
chr3	149493077	149493078	chunk0131_245_1	14.0755	AR_DHT_Control	chr3	149492984	149493105	-48802454	+	MIRb	SINE	MIR	112	236	-32	2
chr3	149659246	149659247	chunk0131_256_1	116.54852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	149659211	149659287	-48636272	+	MIRb	SINE	MIR	176	253	-15	2
chr3	150039883	150039884	chunk0131_264_1	22.4729	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	150039627	150040117	-48255442	+	LTR37B	LTR	ERV1	1	468	0	2
chr3	150082635	150082636	chunk0131_267_1	20.3192	AR_DHT_Control	chr3	150082552	150082694	-48212865	+	L2c	LINE	L2	3155	3286	-89	2
chr3	150139077	150139078	chunk0131_268_1	10.52499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	150139011	150139436	-48156123	-	L2	LINE	L2	-864	2555	2113	2
chr3	150154043	150154044	chunk0131_269_1	91.9	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	150153218	150154258	-48141301	+	L1MC1	LINE	L1	2801	3737	-2639	2
chr3	150194321	150194322	chunk0131_274_1	58.9458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	150194320	150194344	-48101215	+	(T)n	Simple_repeat	Simple_repeat	1	24	0	2
chr3	150228196	150228197	chunk0131_275_1	6.10159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	150227823	150228258	-48067301	+	LTR41B	LTR	ERVL	1	458	-300	2
chr3	150314753	150314754	chunk0131_282_1	9.83641	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	150314749	150314792	-47980767	+	(T)n	Simple_repeat	Simple_repeat	1	43	0	2
chr3	150535736	150535737	chunk0131_289_1	71.5847	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	150535551	150535974	-47759585	+	L1ME3Cz	LINE	L1	312	748	-249	2
chr3	150588711	150588712	chunk0131_296_1	90.9376	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	150588567	150589179	-47706380	+	Tigger3b	DNA	TcMar-Tigger	1	656	-575	2
chr3	150620528	150620529	chunk0131_299_1	4.83532	AR_DHT_Control	chr3	150620461	150620571	-47674988	+	L2b	LINE	L2	3265	3374	-1	2
chr3	150637899	150637900	chunk0131_300_1	26.23409	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	150637880	150638003	-47657556	-	MLT1B	LTR	ERVL-MaLR	0	390	273	2
chr3	150697020	150697021	chunk0131_302_1	16.843	AR_DHT_Control	chr3	150695685	150697278	-47598281	+	L1ME3G	LINE	L1	13	791	-133	2
chr3	150773787	150773788	chunk0131_314_1	57.05446	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	150773714	150773835	-47521724	+	LTR40c	LTR	ERVL	178	293	-172	2
chr3	150826358	150826359	chunk0131_315_1	5.99997	AR_DHT_Control	chr3	150826241	150826413	-47469146	-	HERVL18-int	LTR	ERVL	-5381	666	493	2
chr3	151041391	151041392	chunk0131_322_1	6.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151041153	151041535	-47254024	+	L1MC5	LINE	L1	8888	9302	-2	2
chr3	151101387	151101388	chunk0131_323_1	6.58746	AR_DHT_Control	chr3	151101271	151101470	-47194089	-	MIR	SINE	MIR	-1	261	43	2
chr3	151112923	151112924	chunk0131_324_1	215.2338	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151112885	151113631	-47181928	-	L2a	LINE	L2	0	3426	2635	2
chr3	151120543	151120544	chunk0131_327_1	36.4466	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	151120272	151120745	-47174814	+	L1ME4b	LINE	L1	272	798	-1979	2
chr3	151147135	151147136	chunk0131_330_1	20.59741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151147069	151147208	-47148351	-	L1MC5	LINE	L1	-5	9299	9149	2
chr3	151186690	151186691	chunk0131_335_1	5.95444	AR_DHT_Control	chr3	151186271	151186947	-47108612	+	L2a	LINE	L2	2690	3426	0	2
chr3	151552564	151552565	chunk0131_346_1	9.28589	AR_DHT_Control	chr3	151552343	151552877	-46742682	-	MER87	LTR	ERV1	-30	511	3	2
chr3	151572952	151572953	chunk0131_347_1	165.971	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151569736	151575862	-46719697	-	L1PA6	LINE	L1	-3	6324	174	2
chr3	151816370	151816371	chunk0131_355_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151816170	151816567	-46478992	+	L2c	LINE	L2	2924	3352	-35	2
chr3	151969465	151969466	chunk0131_362_1	14.1561	AR_DHT_Control	chr3	151969074	151969483	-46326076	-	LTR16A	LTR	ERVL	-35	416	1	2
chr3	151978146	151978147	chunk0131_365_1	8.27376	AR_DHT_Control	chr3	151977929	151978399	-46317160	-	L1ME3F	LINE	L1	-301	6333	5842	2
chr3	151986914	151986915	chunk0131_366_1	22.442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151986623	151986974	-46308585	+	L2c	LINE	L2	3026	3377	-10	2
chr3	151996642	151996643	chunk0131_368_1	9.2143	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	151996383	151996848	-46298711	-	L2b	LINE	L2	-253	3122	2582	2
chr3	152056265	152056266	chunk0131_371_1	42.0002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	152056216	152056345	-46239214	+	L2c	LINE	L2	3256	3382	-5	2
chr3	152151029	152151030	chunk0131_373_1	21.4815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	152150890	152151046	-46144513	-	MER53	DNA	hAT	-4	189	1	2
chr3	152232097	152232098	chunk0131_377_1	7.97539	AR_DHT_Control	chr3	152232060	152232485	-46063074	+	L1MA1	LINE	L1	5865	6295	-7	2
chr3	152459718	152459719	chunk0131_388_1	14.1125	AR_DHT_Control	chr3	152459632	152459853	-45835706	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr3	152469630	152469631	chunk0131_389_1	5.37222	AR_DHT_Control	chr3	152469610	152469915	-45825644	+	L2c	LINE	L2	3047	3353	-34	2
chr3	152484572	152484573	chunk0131_390_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	152483810	152484990	-45810569	-	L1PA16	LINE	L1	-4834	2019	851	2
chr3	152505709	152505710	chunk0131_391_1	8.7059	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	152502367	152506468	-45789091	-	L1M1	LINE	L1	-3380	4185	2	2
chr3	152794247	152794248	chunk0131_394_1	141.08102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr3	152794133	152794276	-45501283	+	L2b	LINE	L2	3221	3372	-3	2
chr3	152953793	152953794	chunk0131_412_1	137.06296	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	152953756	152953955	-45341604	-	MER58C	DNA	hAT-Charlie	0	215	2	2
chr3	152955587	152955588	chunk0131_414_1	67.0244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	152954919	152955752	-45339807	+	L2c	LINE	L2	2494	3384	-3	2
chr3	152970152	152970153	chunk0131_415_1	40.2604	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	152969766	152970167	-45325392	+	L2a	LINE	L2	3026	3423	-3	2
chr3	153292612	153292613	chunk0131_422_1	5.99997	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	153292549	153292628	-45002931	+	L2a	LINE	L2	3313	3421	-5	2
chr3	153528719	153528720	chunk0131_426_1	10.6287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	153528687	153528766	-44766793	+	LTR40A1	LTR	ERVL	446	513	-71	2
chr3	153703537	153703538	chunk0131_432_1	16.78599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	153703234	153703704	-44591855	-	LTR40b	LTR	ERVL	0	462	3	2
chr3	153778316	153778317	chunk0131_438_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	153778236	153778487	-44517072	-	MIR	SINE	MIR	-6	262	11	2
chr3	153871820	153871821	chunk0131_441_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	153870020	153873121	-44422438	+	L1MA2	LINE	L1	3576	6731	-834	2
chr3	153906501	153906502	chunk0131_442_1	13.16215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	153906500	153906747	-44388812	+	ERV3-16A3_I-int	LTR	ERVL	1956	2196	-3030	2
chr3	154077949	154077950	chunk0131_448_1	44.9946	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	154077870	154078069	-44217490	-	MamRep434	DNA	TcMar-Tigger	-220	206	15	2
chr3	154081459	154081460	chunk0131_450_1	100.7116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	154081383	154081501	-44214058	-	MIR	SINE	MIR	-3	259	146	2
chr3	154089735	154089736	chunk0131_453_1	9.1351	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	154089524	154089737	-44205822	-	MER102a	DNA	hAT-Charlie	-48	282	73	2
chr3	154120498	154120499	chunk0131_457_1	12.9875	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	154120293	154120726	-44174833	-	L2c	LINE	L2	0	3426	2853	2
chr3	154126842	154126843	chunk0131_459_1	26.4858	AR_DHT_Control	chr3	154126785	154127931	-44167628	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	2
chr3	154169612	154169613	chunk0132_1_1	7.86105	AR_DHT_Control	chr3	154169249	154169698	-44125861	+	Tigger17a	DNA	TcMar-Tigger	2	455	-199	2
chr3	154465390	154465391	chunk0132_19_1	71.43513	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	154465290	154465506	-43830053	+	MER58A	DNA	hAT-Charlie	2	224	0	2
chr3	154547697	154547698	chunk0132_23_1	4.33257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	154547621	154547859	-43747700	-	L1M5	LINE	L1	-303	5821	5561	2
chr3	154584962	154584963	chunk0132_24_1	11.1588	AR_DHT_Control	chr3	154584841	154585133	-43710426	-	L1MD2	LINE	L1	-12	6347	6053	2
chr3	154693315	154693316	chunk0132_27_1	117.9314	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	154693136	154693594	-43601965	-	MLT1L	LTR	ERVL-MaLR	0	610	158	2
chr3	154706300	154706301	chunk0132_29_1	38.5372	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	154706030	154706308	-43589251	-	L1M5	LINE	L1	-1310	4836	4561	2
chr3	154772281	154772282	chunk0132_36_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	154770320	154773595	-43521964	-	L1PA14	LINE	L1	-3957	4184	7	2
chr3	154784707	154784708	chunk0132_37_1	9.42003	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	154784370	154784990	-43510569	-	L1M5	LINE	L1	-1411	4735	4109	2
chr3	154877728	154877729	chunk0132_45_1	41.0769	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	154875033	154881148	-43414411	+	L1PA7	LINE	L1	190	6339	0	2
chr3	154885714	154885715	chunk0132_46_1	195.2017	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	154883889	154885890	-43409669	+	L1MC1	LINE	L1	4501	6497	-11	2
chr3	154946126	154946127	chunk0132_48_1	15.8999	AR_DHT_Control	chr3	154945160	154951300	-43344259	+	L1PA6	LINE	L1	174	6314	-13	2
chr3	155019721	155019722	chunk0132_52_1	5.82105	AR_DHT_Control	chr3	155019610	155020203	-43275356	+	L2a	LINE	L2	2722	3417	-9	2
chr3	155034973	155034974	chunk0132_53_1	13.3499	AR_DHT_Control	chr3	155034856	155035036	-43260523	+	MER117	DNA	hAT-Charlie	4	191	-6	2
chr3	155135171	155135172	chunk0132_59_1	4.88663	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	155134137	155136437	-43159122	-	L1PA16	LINE	L1	-9	6157	3857	2
chr3	155239502	155239503	chunk0132_78_1	7.11634	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	155234056	155240696	-43054863	-	L1PA15	LINE	L1	-2	6783	11	2
chr3	155239937	155239938	chunk0132_79_1	10.54998	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	155234056	155240696	-43054863	-	L1PA15	LINE	L1	-2	6783	11	2
chr3	155370696	155370697	chunk0132_84_1	63.9564	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	155370693	155370812	-42924747	+	LTR106_Mam	LTR	LTR	340	464	-244	2
chr3	155525435	155525436	chunk0132_87_1	6.48643	AR_DHT_Control	chr3	155525225	155525545	-42770014	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	2
chr3	155572492	155572493	chunk0132_88_1	67.99751	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	155572267	155572743	-42722816	-	HAL1	LINE	L1	-871	1636	1034	2
chr3	155573177	155573178	chunk0132_90_1	28.82004	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	155573043	155573244	-42722315	-	HAL1	LINE	L1	-1377	1088	836	2
chr3	155602328	155602329	chunk0132_92_1	5.36932	AR_DHT_Control	chr3	155602081	155602391	-42693168	+	L1MC4a	LINE	L1	5741	6069	-1813	2
chr3	155622371	155622372	chunk0132_93_1	12.4153	AR_DHT_Control	chr3	155620664	155626212	-42669347	+	L1PA7	LINE	L1	710	6291	-178	2
chr3	155622918	155622919	chunk0132_94_1	9.90105	AR_DHT_Control	chr3	155620664	155626212	-42669347	+	L1PA7	LINE	L1	710	6291	-178	2
chr3	155629021	155629022	chunk0132_95_1	22.68728	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	155628979	155629176	-42666383	+	MIRb	SINE	MIR	22	260	-8	2
chr3	155643713	155643714	chunk0132_97_1	7.82111	AR_DHT_Control	chr3	155643697	155643812	-42651747	+	L2a	LINE	L2	3305	3425	-1	2
chr3	155689389	155689390	chunk0132_103_1	7.52656	AR_DHT_Control	chr3	155688545	155690185	-42605374	+	L1M1	LINE	L1	1105	2875	-4690	2
chr3	155712018	155712019	chunk0132_104_1	15.3744	AR_DHT_Control	chr3	155711597	155712115	-42583444	+	MLT1K	LTR	ERVL-MaLR	48	592	-3	2
chr3	155724207	155724208	chunk0132_105_1	19.06551	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	155723975	155724813	-42570746	-	L1PB1	LINE	L1	-3230	3632	2761	2
chr3	155876653	155876654	chunk0132_112_1	21.80229	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	155875999	155876667	-42418892	-	BLACKJACK	DNA	hAT-Blackjack	-2225	744	1	2
chr3	155891006	155891007	chunk0132_113_1	13.8894	AR_DHT_Control	chr3	155890301	155891255	-42404304	-	Tigger6a	DNA	TcMar-Tigger	0	1083	1	2
chr3	155917993	155917994	chunk0132_114_1	56.5103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	155917895	155918167	-42377392	-	L1MB2	LINE	L1	-380	5804	5471	2
chr3	155973525	155973526	chunk0132_119_1	51.077	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	155973302	155973767	-42321792	-	MLT1C	LTR	ERVL-MaLR	-4	463	1	2
chr3	156025330	156025331	chunk0132_124_1	8.73763	AR_DHT_Control	chr3	156024951	156025350	-42270209	+	L2c	LINE	L2	2910	3382	-5	2
chr3	156140216	156140217	chunk0132_129_1	11.18906	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	156139964	156140300	-42155259	+	MER113	DNA	hAT-Charlie	68	385	-136	2
chr3	156230623	156230624	chunk0132_133_1	10.6593	AR_DHT_Control	chr3	156230519	156230763	-42064796	-	L2a	LINE	L2	-18	3408	3142	2
chr3	156269434	156269435	chunk0132_135_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	156269254	156269913	-42025646	-	L1MA2	LINE	L1	-3264	4301	3628	2
chr3	156275115	156275116	chunk0132_136_1	17.1871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	156274705	156275116	-42020443	-	L1MA9	LINE	L1	-1	6311	5907	2
chr3	156316484	156316485	chunk0132_139_1	45.69155	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	156316358	156316514	-41979045	+	MIR	SINE	MIR	3	164	-98	2
chr3	156585118	156585119	chunk0132_153_1	5.28628	AR_DHT_Control	chr3	156584852	156585569	-41709990	-	L1ME3	LINE	L1	0	6162	5447	2
chr3	156601825	156601826	chunk0132_154_1	17.05569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	156601172	156601932	-41693627	-	Tigger3b	DNA	TcMar-Tigger	-415	816	54	2
chr3	156654406	156654407	chunk0132_157_1	7.33982	AR_DHT_Control	chr3	156654223	156655267	-41640292	-	L2a	LINE	L2	-315	3111	1817	2
chr3	156755358	156755359	chunk0132_168_1	12.0071	AR_DHT_Control	chr3	156754984	156755519	-41540040	+	MER34C_	LTR	ERV1	35	585	0	2
chr3	156789090	156789091	chunk0132_169_1	8.57499	AR_DHT_Control	chr3	156789025	156789140	-41506419	-	MamRep434	DNA	TcMar-Tigger	-77	349	217	2
chr3	156796125	156796126	chunk0132_170_1	6.43609	AR_DHT_Control	chr3	156795895	156796519	-41499040	+	Tigger6a	DNA	TcMar-Tigger	2	646	-437	2
chr3	157052928	157052929	chunk0132_180_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	157052918	157052998	-41242561	-	Charlie2b	DNA	hAT-Charlie	-545	2237	2153	2
chr3	157089407	157089408	chunk0132_186_1	7.83042	AR_DHT_Control	chr3	157089355	157089516	-41206043	-	MIR3	SINE	MIR	-5	203	39	2
chr3	157236243	157236244	chunk0132_196_1	15.67492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	157236166	157236466	-41059093	-	AluSz6	SINE	Alu	-11	301	3	2
chr3	157336827	157336828	chunk0132_205_1	28.2008	AR_DHT_Control	chr3	157336738	157336958	-40958601	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr3	157473968	157473969	chunk0132_209_1	24.03293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	157473718	157474119	-40821440	-	L1MCa	LINE	L1	-2098	4220	3797	2
chr3	157490754	157490755	chunk0132_210_1	7.78444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	157490362	157491213	-40804346	+	L1ME3C	LINE	L1	5263	6109	-14	2
chr3	157691825	157691826	chunk0132_216_1	15.32536	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	157691438	157691922	-40603637	-	L1ME3G	LINE	L1	-283	641	121	2
chr3	157764710	157764711	chunk0132_219_1	10.7862	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	157764624	157764818	-40530741	-	L2	LINE	L2	-1494	1925	1699	2
chr3	158077594	158077595	chunk0132_225_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	158077510	158077637	-40217922	+	L1ME3Cz	LINE	L1	5340	5458	-785	2
chr3	158098248	158098249	chunk0132_226_1	6.35715	AR_DHT_Control	chr3	158098205	158098250	-40197309	+	G-rich	Low_complexity	Low_complexity	1	45	0	2
chr3	158381751	158381752	chunk0132_230_1	32.1335	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	158381506	158382559	-39913000	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	2
chr3	158467383	158467384	chunk0132_233_1	20.86154	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	158467371	158467505	-39828054	+	MIRc	SINE	MIR	85	242	-26	2
chr3	158468622	158468623	chunk0132_234_1	8.96258	AR_DHT_Control	chr3	158468486	158468668	-39826891	+	MIR	SINE	MIR	3	237	-25	2
chr3	158487947	158487948	chunk0132_235_1	4.51651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	158487669	158487974	-39807585	+	AluSx1	SINE	Alu	1	310	-2	2
chr3	158647927	158647928	chunk0132_236_1	10.0817	AR_DHT_Control	chr3	158647839	158648058	-39647501	-	L1MEh	LINE	L1	-1028	1207	1003	2
chr3	158911720	158911721	chunk0132_256_1	8.71601	AR_DHT_Control	chr3	158911652	158911958	-39383601	+	LTR18C	LTR	ERVL	3	332	-13	2
chr3	158914823	158914824	chunk0132_257_1	14.48462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	158914533	158915144	-39380415	-	MER66-int	LTR	ERV1	-4843	1833	1212	2
chr3	158915893	158915894	chunk0132_258_1	6.40004	AR_DHT_Control	chr3	158915484	158916541	-39379018	-	MER66-int	LTR	ERV1	-5571	1105	4	2
chr3	159031525	159031526	chunk0132_259_1	26.6129	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	159031516	159031849	-39263710	-	L1ME3D	LINE	L1	-61	6181	5833	2
chr3	159170069	159170070	chunk0132_263_1	17.62216	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	159170036	159170186	-39125373	-	Charlie4z	DNA	hAT-Charlie	-1	166	23	2
chr3	159184488	159184489	chunk0132_264_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	159183770	159184617	-39110942	+	L2a	LINE	L2	2527	3425	-1	2
chr3	159627746	159627747	chunk0132_273_1	17.27989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	159627699	159627940	-38667619	+	L1MEg	LINE	L1	52	285	-5799	2
chr3	159807989	159807990	chunk0132_280_1	38.646	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	159807814	159808006	-38487553	-	MIRb	SINE	MIR	-52	216	14	2
chr3	159829966	159829967	chunk0132_281_1	5.24411	AR_DHT_Control	chr3	159829656	159830380	-38465179	+	Charlie15b	DNA	hAT-Charlie	279	1033	-28	2
chr3	159963125	159963126	chunk0132_286_1	22.0805	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	159962772	159963341	-38332218	-	Tigger2b_Pri	DNA	TcMar-Tigger	-228	840	274	2
chr3	160171332	160171333	chunk0132_294_1	22.4566	AR_DHT_Control	chr3	160170882	160171499	-38124060	-	L2a	LINE	L2	-303	3123	2465	2
chr3	160179951	160179952	chunk0132_296_1	22.45253	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160179670	160179993	-38115566	-	MSTD	LTR	ERVL-MaLR	0	396	38	2
chr3	160238655	160238656	chunk0132_303_1	21.95972	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	160238610	160238732	-38056827	+	MIR	SINE	MIR	5	120	-142	2
chr3	160253473	160253474	chunk0132_304_1	36.5834	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160252879	160253964	-38041595	+	MER4B-int	LTR	ERV1	3246	4341	-2417	2
chr3	160378571	160378572	chunk0132_307_1	8.57499	AR_DHT_Control	chr3	160378414	160379719	-37915840	+	L1MC4	LINE	L1	6704	8039	-3	2
chr3	160446423	160446424	chunk0132_309_1	18.00031	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160446283	160446564	-37848995	+	L1M6	LINE	L1	3887	4182	-2218	2
chr3	160517508	160517509	chunk0132_310_1	19.0466	AR_DHT_Control	chr3	160516965	160518129	-37777430	-	L1MB7	LINE	L1	-19	6165	4989	2
chr3	160547549	160547550	chunk0132_311_1	11.1716	AR_DHT_Control	chr3	160547421	160548210	-37747349	-	L1MC1	LINE	L1	-19	6314	5470	2
chr3	160569971	160569972	chunk0132_312_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160569962	160570303	-37725256	-	MLT1A0	LTR	ERVL-MaLR	-12	353	2	2
chr3	160796980	160796981	chunk0132_317_1	202.9201	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	160796895	160797005	-37498554	+	L2a	LINE	L2	2893	3021	-398	2
chr3	161082355	161082356	chunk0132_325_1	27.27393	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	161082343	161082502	-37213057	+	MLT1I	LTR	ERVL-MaLR	201	386	-25	2
chr3	161083963	161083964	chunk0132_328_1	141.28484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	161082994	161084119	-37211440	-	Tigger3b	DNA	TcMar-Tigger	-5	1226	44	2
chr3	161092668	161092669	chunk0132_329_1	8.21385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	161092661	161092757	-37202802	+	MIRb	SINE	MIR	36	129	-139	2
chr3	161098827	161098828	chunk0132_330_1	10.0617	AR_DHT_Control	chr3	161098791	161099515	-37196044	+	L3	LINE	CR1	2797	3479	-620	2
chr3	161139941	161139942	chunk0132_331_1	9.76623	AR_DHT_Control	chr3	161139777	161140366	-37155193	+	MER41C	LTR	ERV1	1	515	-6	2
chr3	161226015	161226016	chunk0132_335_1	14.61083	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	161225988	161226158	-37069401	+	MIR3	SINE	MIR	10	187	-21	2
chr3	161395808	161395809	chunk0132_348_1	35.616	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	161395612	161395866	-36899693	-	MIRb	SINE	MIR	-11	257	9	2
chr3	161420991	161420992	chunk0132_354_1	12.78557	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	161420819	161421173	-36874386	-	L2a	LINE	L2	-1	3425	3034	2
chr3	161454795	161454796	chunk0132_355_1	35.0073	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	161454580	161455843	-36839716	+	L1MEc	LINE	L1	36	1402	-4998	2
chr3	161607268	161607269	chunk0132_362_1	18.12943	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	161607228	161607427	-36688132	+	MER58A	DNA	hAT-Charlie	4	224	0	2
chr3	162835504	162835505	chunk0132_371_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	162835116	162836105	-35459454	-	L1M1	LINE	L1	-5775	1790	12	2
chr3	162868716	162868717	chunk0132_372_1	11.946	AR_DHT_Control	chr3	162867801	162872544	-35423015	+	L1P2	LINE	L1	1	4683	-1463	2
chr3	162938236	162938237	chunk0132_373_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	162938102	162938520	-35357039	-	L4_A_Mam	LINE	RTE-X	-99	4891	4461	2
chr3	163138430	163138431	chunk0132_378_1	65.4498	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	163137515	163138990	-35156569	-	L1MA3	LINE	L1	-2629	4936	3458	2
chr3	163171539	163171540	chunk0132_379_1	48.276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	163169731	163174397	-35121162	-	L1P2	LINE	L1	-910	5551	728	2
chr3	163722226	163722227	chunk0132_391_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	163721508	163722681	-34572878	-	LTR2752	LTR	ERV1	0	1263	3	2
chr3	163824649	163824650	chunk0132_393_1	44.7009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	163824139	163827294	-34468265	-	L1MA4A	LINE	L1	-510	6495	3245	2
chr3	163897830	163897831	chunk0132_395_1	7.36432	AR_DHT_Control	chr3	163897357	163900007	-34395552	+	Tigger2	DNA	TcMar-Tigger	2	2718	0	2
chr3	163940316	163940317	chunk0132_396_1	6.48643	AR_DHT_Control	chr3	163940204	163940354	-34355205	+	LTR33	LTR	ERVL	110	271	-244	2
chr3	163951439	163951440	chunk0132_398_1	108.265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	163951412	163951460	-34344099	+	(TTTTG)n	Simple_repeat	Simple_repeat	1	50	0	2
chr3	164032055	164032056	chunk0132_400_1	22.94882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	164032025	164032258	-34263301	-	MER57B2	LTR	ERV1	-177	226	1	2
chr3	164197183	164197184	chunk0132_405_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	164192625	164198550	-34097009	+	L1PA16	LINE	L1	15	6067	-626	2
chr3	164281788	164281789	chunk0132_408_1	10.1214	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	164278031	164282655	-34012904	+	L1M1	LINE	L1	507	5178	-2387	2
chr3	164418684	164418685	chunk0132_414_1	83.4165	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	164418440	164418818	-33876741	+	L1M6	LINE	L1	619	1003	-5493	2
chr3	164462805	164462806	chunk0132_415_1	16.7683	AR_DHT_Control	chr3	164461896	164463060	-33832499	-	L1PA16	LINE	L1	0	6166	4965	2
chr3	164598057	164598058	chunk0132_420_1	15.1238	AR_DHT_Control	chr3	164597714	164598143	-33697416	-	LTR40a	LTR	ERVL	0	519	67	2
chr3	164609091	164609092	chunk0132_423_1	5.95444	AR_DHT_Control	chr3	164608864	164609219	-33686340	+	MER57C1	LTR	ERV1	3	376	-9	2
chr3	164938525	164938526	chunk0132_429_1	7.48058	AR_DHT_Control	chr3	164938173	164938570	-33356989	-	HAL1	LINE	L1	-424	2083	1668	2
chr3	164977983	164977984	chunk0132_431_1	97.909	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	164976607	164978628	-33316931	-	L1MA6	LINE	L1	0	6300	4290	2
chr3	165035124	165035125	chunk0132_432_1	24.68829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	165034750	165035298	-33260261	-	L2	LINE	L2	-511	2908	2240	2
chr3	165137749	165137750	chunk0132_443_1	57.4984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	165134418	165140504	-33155055	-	L1PA5	LINE	L1	-5	6149	4	2
chr3	165169125	165169126	chunk0132_444_1	16.37661	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	165163837	165169955	-33125604	-	L1PA6	LINE	L1	0	6154	4	2
chr3	165322786	165322787	chunk0133_9_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	165321586	165323502	-32972057	-	L1MA3	LINE	L1	-5589	1976	9	2
chr3	165545329	165545330	chunk0133_10_1	46.4039	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	165545127	165545538	-32750021	+	MER110	LTR	ERV1	98	479	-12	2
chr3	165583270	165583271	chunk0133_12_1	20.94598	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	165581673	165583538	-32712021	+	L1ME3A	LINE	L1	3080	5092	-1054	2
chr3	165710757	165710758	chunk0133_20_1	43.7082	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	165710650	165710853	-32584706	+	L2a	LINE	L2	3208	3425	-1	2
chr3	165732501	165732502	chunk0133_22_1	7.2534	AR_DHT_Control	chr3	165732174	165732555	-32563004	-	L1MEc	LINE	L1	-2743	3576	3184	2
chr3	165747097	165747098	chunk0133_23_1	49.3039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	165747036	165747284	-32548275	+	L1ME2	LINE	L1	5902	6157	-7	2
chr3	165883935	165883936	chunk0133_30_1	47.5901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	165883883	165883962	-32411597	+	(AT)n	Simple_repeat	Simple_repeat	1	81	0	2
chr3	165947001	165947002	chunk0133_31_1	6.13915	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	165946465	165947025	-32348534	-	MER89	LTR	ERV1	0	559	1	2
chr3	165954356	165954357	chunk0133_32_1	66.8431	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	165954248	165955379	-32340180	+	L1PB1	LINE	L1	5017	6151	0	2
chr3	166052202	166052203	chunk0133_37_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	166052114	166052204	-32243355	+	L1M2	LINE	L1	679	774	-6435	2
chr3	166177843	166177844	chunk0133_42_1	56.0985	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	166177697	166177933	-32117626	-	MLT1J	LTR	ERVL-MaLR	-250	262	20	2
chr3	166304829	166304830	chunk0133_44_1	17.9552	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	166304616	166305247	-31990312	-	Mam_R4	LINE	Dong-R4	-3077	732	73	2
chr3	166444979	166444980	chunk0133_46_1	6.98475	AR_DHT_Control	chr3	166443948	166445172	-31850387	+	LTR2752	LTR	ERV1	1	1263	0	2
chr3	166574477	166574478	chunk0133_54_1	11.872	AR_DHT_Control	chr3	166574433	166574592	-31720967	+	MIR3	SINE	MIR	36	203	-5	2
chr3	166755507	166755508	chunk0133_56_1	12.1147	AR_DHT_Control	chr3	166754956	166755759	-31539800	+	L1MCa	LINE	L1	1072	1958	-4444	2
chr3	166778076	166778077	chunk0133_58_1	59.7469	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	166777973	166783621	-31511938	-	L1PA16	LINE	L1	-1	6692	1107	2
chr3	166839319	166839320	chunk0133_62_1	47.5067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	166839126	166839563	-31455996	+	L1MC	LINE	L1	3618	4055	-2091	2
chr3	166845345	166845346	chunk0133_64_1	14.2975	AR_DHT_Control	chr3	166844346	166845440	-31450119	+	FordPrefect	DNA	hAT-Tip100	119	1270	-413	2
chr3	166865535	166865536	chunk0133_66_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	166864950	166866369	-31429190	+	MER52D	LTR	ERV1	481	2115	-8	2
chr3	166901369	166901370	chunk0133_67_1	9.21264	AR_DHT_Control	chr3	166901367	166901449	-31394110	+	MLT1J1	LTR	ERVL-MaLR	44	130	-314	2
chr3	166963023	166963024	chunk0133_68_1	10.4518	AR_DHT_Control	chr3	166962594	166963356	-31332203	-	L1MEd	LINE	L1	-5345	1741	979	2
chr3	166980947	166980948	chunk0133_70_1	21.58844	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	166980911	166981616	-31313943	+	L1MB8	LINE	L1	4673	5414	-750	2
chr3	166981834	166981835	chunk0133_71_1	8.64577	AR_DHT_Control	chr3	166981826	166982106	-31313453	+	L1MB8	LINE	L1	5536	5838	-346	2
chr3	166992629	166992630	chunk0133_73_1	11.51766	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	166992246	166992795	-31302764	-	LTR40b	LTR	ERVL	0	519	19	2
chr3	167105423	167105424	chunk0133_77_1	6.58746	AR_DHT_Control	chr3	167105187	167105598	-31189961	+	LTR80A	LTR	ERVL	135	583	0	2
chr3	167115695	167115696	chunk0133_78_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	167114637	167116800	-31178759	-	MER52D	LTR	ERV1	0	2123	55	2
chr3	167289579	167289580	chunk0133_81_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	167289314	167295687	-30999872	+	L1PA7	LINE	L1	11	6468	-1	2
chr3	167312522	167312523	chunk0133_82_1	11.6878	AR_DHT_Control	chr3	167310775	167312620	-30982939	+	L1MC1	LINE	L1	4415	6333	0	2
chr3	167319116	167319117	chunk0133_83_1	8.27376	AR_DHT_Control	chr3	167318887	167321201	-30974358	+	L1MC4a	LINE	L1	5431	7882	0	2
chr3	167439307	167439308	chunk0133_85_1	29.9116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	167439294	167439516	-30856043	+	L2a	LINE	L2	3194	3426	0	2
chr3	167990867	167990868	chunk0133_106_1	47.6751	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	167990800	167990905	-30304654	-	L2a	LINE	L2	-6	3420	3307	2
chr3	168019044	168019045	chunk0133_108_1	60.8963	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	168018880	168019099	-30276460	-	MER58A	DNA	hAT-Charlie	0	224	2	2
chr3	168040231	168040232	chunk0133_109_1	4.06817	AR_DHT_Control	chr3	168040203	168040257	-30255302	-	L2a	LINE	L2	-5	3421	3368	2
chr3	168186696	168186697	chunk0133_117_1	6.0927	AR_DHT_Control	chr3	168186668	168187013	-30108546	+	Charlie8	DNA	hAT-Charlie	175	505	-1923	2
chr3	168462534	168462535	chunk0133_121_1	28.46688	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	168461512	168463310	-29832249	-	L1M4c	LINE	L1	-4548	1836	21	2
chr3	168566277	168566278	chunk0133_123_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	168563970	168566594	-29728965	-	MER57A-int	LTR	ERV1	-1775	5762	3285	2
chr3	168958289	168958290	chunk0133_130_1	58.80703	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	168958236	168958307	-29337252	-	L1MC1	LINE	L1	-7	6345	6268	2
chr3	169324580	169324581	chunk0133_150_1	19.51631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	169324462	169324644	-28970915	-	MIRc	SINE	MIR	-32	236	46	2
chr3	169428266	169428267	chunk0133_151_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	169428239	169428564	-28866995	-	MER1B	DNA	hAT-Charlie	0	339	1	2
chr3	169817440	169817441	chunk0133_162_1	51.8083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	169816970	169817892	-28477667	-	L1M1	LINE	L1	-3027	4538	3611	2
chr3	169819741	169819742	chunk0133_164_1	75.9414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	169819669	169819756	-28475803	+	MIR	SINE	MIR	122	208	-54	2
chr3	169835769	169835770	chunk0133_166_1	13.49687	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	169835726	169835983	-28459576	+	L2a	LINE	L2	2920	3191	-235	2
chr3	170033757	170033758	chunk0133_174_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	170033690	170033923	-28261636	-	MLT1L	LTR	ERVL-MaLR	-338	272	11	2
chr3	170070602	170070603	chunk0133_178_1	8.58634	AR_DHT_Control	chr3	170070113	170070704	-28224855	-	L1MC5	LINE	L1	-258	9046	8312	2
chr3	170160101	170160102	chunk0133_179_1	67.6107	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	170160036	170160129	-28135430	+	L2c	LINE	L2	3253	3367	-20	2
chr3	170632152	170632153	chunk0133_191_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	170632032	170632170	-27663389	+	L2c	LINE	L2	3258	3387	0	2
chr3	170765658	170765659	chunk0133_195_1	5.25527	AR_DHT_Control	chr3	170765101	170765864	-27529695	-	Tigger6a	DNA	TcMar-Tigger	-313	770	1	2
chr3	170804702	170804703	chunk0133_197_1	14.17791	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	170804594	170805812	-27489747	+	L1PB1	LINE	L1	4934	6143	-8	2
chr3	170815523	170815524	chunk0133_202_1	5.6503	AR_DHT_Control	chr3	170815485	170815856	-27479703	+	MER1B	DNA	hAT-Charlie	1	339	0	2
chr3	170901984	170901985	chunk0133_208_1	6.83133	AR_DHT_Control	chr3	170901933	170902282	-27393277	+	ERVL-E-int	LTR	ERVL	3263	3616	-2051	2
chr3	170941821	170941822	chunk0133_209_1	52.1455	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	170940608	170941871	-27353688	+	L1MC3	LINE	L1	5735	6955	-830	2
chr3	170949398	170949399	chunk0133_212_1	34.7415	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	170949263	170949462	-27346097	-	Tigger1	DNA	TcMar-Tigger	-2220	198	5	2
chr3	171145928	171145929	chunk0133_219_1	6.13915	AR_DHT_Control	chr3	171145465	171146329	-27149230	+	L4_A_Mam	LINE	RTE-X	4078	4971	-19	2
chr3	171248633	171248634	chunk0133_227_1	45.1721	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	171248357	171248729	-27046830	-	L2	LINE	L2	-2141	1278	889	2
chr3	171261795	171261796	chunk0133_228_1	4.51651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	171261672	171261931	-27033628	-	L2a	LINE	L2	0	3426	3125	2
chr3	171507059	171507060	chunk0133_242_1	16.7351	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	171507002	171507149	-26788410	-	MIRc	SINE	MIR	-20	248	115	2
chr3	171532244	171532245	chunk0133_243_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	171531538	171532773	-26762786	-	ERVL-B4-int	LTR	ERVL	-494	5220	3999	2
chr3	171679073	171679074	chunk0133_254_1	12.4402	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	171678688	171679206	-26616353	+	L2c	LINE	L2	2828	3384	-3	2
chr3	171902212	171902213	chunk0133_267_1	13.7525	AR_DHT_Control	chr3	171902050	171902241	-26393318	-	LTR104_Mam	LTR	Gypsy	-378	1131	948	2
chr3	171915505	171915506	chunk0133_268_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	171915430	171915513	-26380046	+	A-rich	Low_complexity	Low_complexity	1	86	0	2
chr3	171917912	171917913	chunk0133_269_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	171917735	171918154	-26377405	-	ERV3-16A3_LTR	LTR	ERVL	-7	415	1	2
chr3	171943943	171943944	chunk0133_270_1	50.80831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	171943867	171944001	-26351558	+	MIRb	SINE	MIR	57	210	-58	2
chr3	172002687	172002688	chunk0133_273_1	4.83532	AR_DHT_Control	chr3	172002604	172002729	-26292830	+	L1MD	LINE	L1	3012	3156	-2990	2
chr3	172012971	172012972	chunk0133_274_1	27.7769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	172012876	172012998	-26282561	+	L2a	LINE	L2	3272	3424	-2	2
chr3	172030225	172030226	chunk0133_276_1	8.84892	AR_DHT_Control	chr3	172030114	172030918	-26264641	+	Tigger2b_Pri	DNA	TcMar-Tigger	251	1068	0	2
chr3	172051565	172051566	chunk0133_280_1	19.85458	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	172051517	172051661	-26243898	+	L1PB1	LINE	L1	5957	6099	-52	2
chr3	172235214	172235215	chunk0133_300_1	19.57445	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	172234985	172235412	-26060147	-	Charlie4a	DNA	hAT-Charlie	-3	505	24	2
chr3	172513686	172513687	chunk0133_320_1	171.40898	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	172513620	172513729	-25781830	+	Tigger16b	DNA	TcMar-Tigger	223	334	-2	2
chr3	172561976	172561977	chunk0133_325_1	12.4453	AR_DHT_Control	chr3	172561750	172562145	-25733414	+	Tigger3b	DNA	TcMar-Tigger	774	1231	0	2
chr3	172607831	172607832	chunk0133_326_1	3.89067	AR_DHT_Control	chr3	172607710	172608210	-25687349	+	MLT2B4	LTR	ERVL	1	547	-9	2
chr3	172874695	172874696	chunk0133_340_1	10.0576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	172874668	172874738	-25420821	-	Tigger19a	DNA	TcMar-Tigger	-120	203	130	2
chr3	172892794	172892795	chunk0133_342_1	20.01024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	172892748	172892888	-25402671	+	MIRb	SINE	MIR	16	156	-112	2
chr3	172904017	172904018	chunk0133_343_1	26.54224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	172904012	172904196	-25391363	+	MIRb	SINE	MIR	29	222	-46	2
chr3	172946128	172946129	chunk0133_345_1	11.6192	AR_DHT_Control	chr3	172945211	172947410	-25348149	+	L1M1	LINE	L1	1	2153	-5412	2
chr3	173026928	173026929	chunk0133_346_1	9.07871	AR_DHT_Control	chr3	173025445	173027453	-25268106	-	L1ME1	LINE	L1	0	6179	4113	2
chr3	173076059	173076060	chunk0133_347_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	173075241	173076063	-25219496	+	L1MA4	LINE	L1	6879	7710	-9	2
chr3	173132411	173132412	chunk0133_349_1	26.23733	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	173132403	173133129	-25162430	+	L1ME3A	LINE	L1	2777	3481	-3756	2
chr3	173148265	173148266	chunk0133_350_1	7.27655	AR_DHT_Control	chr3	173147303	173151937	-25143622	+	L1MA1	LINE	L1	2978	7721	0	2
chr3	173371417	173371418	chunk0133_353_1	71.7044	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	173370929	173371492	-24924067	+	L2	LINE	L2	684	1391	-2028	2
chr3	173513227	173513228	chunk0133_360_1	6.48643	AR_DHT_Control	chr3	173512773	173513642	-24781917	-	L1MCa	LINE	L1	-5620	888	1	2
chr3	173599802	173599803	chunk0133_364_1	66.9585	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	173599727	173599930	-24695629	+	Tigger17c	DNA	TcMar-Tigger	1	205	-983	2
chr3	173781354	173781355	chunk0133_373_1	10.179	AR_DHT_Control	chr3	173781254	173781433	-24514126	-	L1ME4b	LINE	L1	-140	752	562	2
chr3	173827036	173827037	chunk0133_375_1	7.69414	AR_DHT_Control	chr3	173826795	173827305	-24468254	-	L2a	LINE	L2	-3	3423	2881	2
chr3	173959120	173959121	chunk0133_383_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	173957738	173959329	-24336230	-	MER52A	LTR	ERV1	0	1755	1	2
chr3	174014772	174014773	chunk0133_384_1	11.5684	AR_DHT_Control	chr3	174014676	174014889	-24280670	+	MIRb	SINE	MIR	38	257	-11	2
chr3	174168867	174168868	chunk0133_386_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	174163431	174170229	-24125330	-	L1PA16	LINE	L1	-5	6864	1	2
chr3	174198425	174198426	chunk0133_389_1	132.9355	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174198382	174198578	-24096981	-	L1ME4a	LINE	L1	-393	5731	5515	2
chr3	174234524	174234525	chunk0133_391_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	174234059	174234757	-24060802	-	MER50	LTR	ERV1	-30	704	9	2
chr3	174283888	174283889	chunk0133_392_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174283884	174283925	-24011634	+	A-rich	Low_complexity	Low_complexity	1	41	0	2
chr3	174333797	174333798	chunk0133_399_1	13.40679	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174333788	174333950	-23961609	-	LTR16E1	LTR	ERVL	-375	163	2	2
chr3	174356822	174356823	chunk0133_404_1	24.98481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174356673	174356899	-23938660	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr3	174392635	174392636	chunk0133_407_1	26.46266	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	174392512	174393141	-23902418	+	MER41D	LTR	ERV1	1	557	0	2
chr3	174436469	174436470	chunk0133_410_1	24.6542	AR_DHT_Control	chr3	174436405	174436621	-23858938	+	MER101B	LTR	ERV1	1	217	-353	2
chr3	174537599	174537600	chunk0133_413_1	13.4316	AR_DHT_Control	chr3	174537452	174537717	-23757842	-	L2c	LINE	L2	-1	3386	3104	2
chr3	174565481	174565482	chunk0133_416_1	29.6053	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	174565031	174565856	-23729703	-	L1MC2	LINE	L1	-44	6300	5468	2
chr3	174613471	174613472	chunk0133_419_1	6.48643	AR_DHT_Control	chr3	174611891	174614791	-23680768	-	L1MA3	LINE	L1	-4521	3044	18	2
chr3	174656119	174656120	chunk0133_420_1	15.6173	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174655845	174656496	-23639063	+	Kanga1	DNA	TcMar-Tc2	38	750	-995	2
chr3	174675571	174675572	chunk0133_422_1	51.40862	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	174675328	174675647	-23619912	-	OldhAT1	DNA	hAT-Ac	-351	2497	2180	2
chr3	174826228	174826229	chunk0133_425_1	32.7698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174826139	174826276	-23469283	+	L2a	LINE	L2	3213	3377	-49	2
chr3	174906165	174906166	chunk0133_430_1	23.98815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	174906074	174906275	-23389284	+	L4_C_Mam	LINE	RTE-X	4702	4912	-226	2
chr3	174936813	174936814	chunk0133_433_1	106.0712	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	174936720	174936836	-23358723	+	MER58A	DNA	hAT-Charlie	1	116	-108	2
chr3	174973641	174973642	chunk0133_438_1	28.09006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	174973567	174973897	-23321662	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	2
chr3	175091619	175091620	chunk0133_440_1	78.8225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	175091423	175091755	-23203804	+	LTR106_Mam	LTR	LTR	1	415	-293	2
chr3	175102249	175102250	chunk0133_442_1	92.39413	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	175102077	175102333	-23193226	-	L1ME3G	LINE	L1	-312	5812	5566	2
chr3	175154531	175154532	chunk0133_451_1	53.7009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	175154364	175154571	-23140988	+	MIR	SINE	MIR	17	234	-28	2
chr3	175179254	175179255	chunk0133_453_1	39.7577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	175178996	175179316	-23116243	+	L2c	LINE	L2	3038	3383	-4	2
chr3	175224323	175224324	chunk0133_455_1	27.2545	AR_DHT_Control	chr3	175224020	175224435	-23071124	-	LTR46	LTR	ERV1	-2	458	1	2
chr3	175346985	175346986	chunk0134_6_1	5.89231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	175346903	175347063	-22948496	-	MIRb	SINE	MIR	-1	267	86	2
chr3	175428621	175428622	chunk0134_14_1	5.69226	AR_DHT_Control	chr3	175428557	175428842	-22866717	+	L2	LINE	L2	2553	2854	-565	2
chr3	175591554	175591555	chunk0134_31_1	54.072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	175591491	175591655	-22703904	-	L2c	LINE	L2	-20	3367	3225	2
chr3	175601721	175601722	chunk0134_32_1	7.3092	AR_DHT_Control	chr3	175601607	175601771	-22693788	+	LFSINE_Vert	SINE	tRNA	271	447	-12	2
chr3	175608447	175608448	chunk0134_33_1	4.27166	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	175608411	175608612	-22686947	-	UCON1	Unknown	Unknown	-1004	382	180	2
chr3	175650959	175650960	chunk0134_35_1	5.34107	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	175650880	175651055	-22644504	+	MIRb	SINE	MIR	37	228	-40	2
chr3	175685854	175685855	chunk0134_38_1	12.168	AR_DHT_Control	chr3	175685489	175685998	-22609561	-	MLT2B4	LTR	ERVL	-36	520	1	2
chr3	175940986	175940987	chunk0134_49_1	4.09301	AR_DHT_Control	chr3	175939985	175941418	-22354141	+	L1PA15-16	LINE	L1	14	1542	-5324	2
chr3	175941606	175941607	chunk0134_50_1	10.3174	AR_DHT_Control	chr3	175941387	175945785	-22349774	+	L1M2	LINE	L1	1553	6269	-1296	2
chr3	175948325	175948326	chunk0134_52_1	36.5262	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	175947550	175949136	-22346423	+	L1PA15	LINE	L1	4573	6158	-7	2
chr3	175988884	175988885	chunk0134_55_1	29.3949	AR_DHT_Control	chr3	175988086	175990026	-22305533	-	L1PA17	LINE	L1	-4620	3535	1603	2
chr3	176137256	176137257	chunk0134_58_1	8.27376	AR_DHT_Control	chr3	176136400	176138196	-22157363	-	L1PA15	LINE	L1	-1	6164	4364	2
chr3	176207166	176207167	chunk0134_64_1	14.90408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	176206895	176207183	-22088376	+	L2a	LINE	L2	3111	3425	-1	2
chr3	176228217	176228218	chunk0134_65_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	176227361	176228988	-22066571	+	MSTA-int	LTR	ERVL-MaLR	18	1631	0	2
chr3	176231892	176231893	chunk0134_66_1	4.06036	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	176230604	176232206	-22063353	-	Tigger1	DNA	TcMar-Tigger	-831	1587	5	2
chr3	176234206	176234207	chunk0134_67_1	74.8182	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	176234051	176234597	-22060962	+	L1ME2z	LINE	L1	4651	5224	-922	2
chr3	176487945	176487946	chunk0134_81_1	36.6637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	176487348	176488406	-21807153	+	HAL1b	LINE	L1	969	2165	-256	2
chr3	176554741	176554742	chunk0134_82_1	7.60463	AR_DHT_Control	chr3	176554722	176554879	-21740680	+	MIRb	SINE	MIR	32	227	-41	2
chr3	176674608	176674609	chunk0134_87_1	9.21264	AR_DHT_Control	chr3	176673944	176674729	-21620830	+	L2	LINE	L2	2279	3077	-342	2
chr3	176739217	176739218	chunk0134_90_1	38.0153	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	176739142	176739304	-21556255	+	LTR40A1	LTR	ERVL	22	191	-393	2
chr3	176767493	176767494	chunk0134_96_1	33.38447	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	176766014	176768598	-21526961	+	L1M1	LINE	L1	17	2641	-4924	2
chr3	176868654	176868655	chunk0134_99_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	176867876	176869388	-21426171	+	L1M1	LINE	L1	289	1832	-5733	2
chr3	176943969	176943970	chunk0134_101_1	20.74361	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	176943725	176944782	-21350777	+	L1PB1	LINE	L1	4916	5979	-172	2
chr3	176974428	176974429	chunk0134_104_1	69.8157	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	176974288	176974464	-21321095	-	Tigger3b	DNA	TcMar-Tigger	-1054	177	1	2
chr3	177006082	177006083	chunk0134_108_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	177005287	177006828	-21288731	+	MSTB-int	LTR	ERVL-MaLR	61	1651	0	2
chr3	177084879	177084880	chunk0134_114_1	30.59456	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	177084739	177084937	-21210622	-	L1MEb	LINE	L1	-5843	227	24	2
chr3	177154913	177154914	chunk0134_115_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177154694	177155321	-21140238	+	L1ME1	LINE	L1	2673	3429	-2890	2
chr3	177253980	177253981	chunk0134_119_1	33.9171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	177253735	177254070	-21041489	-	L1ME3	LINE	L1	-1388	4931	4600	2
chr3	177371407	177371408	chunk0134_127_1	6.51897	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177371336	177371472	-20924087	-	Arthur1A	DNA	hAT-Tip100	-23	154	1	2
chr3	177372805	177372806	chunk0134_129_1	80.5166	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177372589	177373229	-20922330	-	MamRep1151	LTR?	LTR?	-20	689	28	2
chr3	177651173	177651174	chunk0134_147_1	28.5059	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177651090	177651279	-20644280	+	MIR	SINE	MIR	71	262	-6	2
chr3	177706692	177706693	chunk0134_151_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177706481	177706786	-20588773	-	LTR88b	LTR	Gypsy?	-511	326	3	2
chr3	177722088	177722089	chunk0134_152_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177721990	177722210	-20573349	-	MER58A	DNA	hAT-Charlie	-1	223	1	2
chr3	177788069	177788070	chunk0134_156_1	155.408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	177787976	177788079	-20507480	-	MIRc	SINE	MIR	-2	266	156	2
chr3	177898239	177898240	chunk0134_164_1	14.33194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	177898082	177898280	-20397279	+	MER44A	DNA	TcMar-Tigger	5	227	-112	2
chr3	178054647	178054648	chunk0134_168_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	178054547	178054759	-20240800	-	L3	LINE	CR1	-3415	684	470	2
chr3	178111122	178111123	chunk0134_179_1	3.73222	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178110797	178111304	-20184255	+	L1MEf	LINE	L1	1491	2013	-4229	2
chr3	178157353	178157354	chunk0134_183_1	8.08101	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178157239	178158460	-20137099	+	L1MEg	LINE	L1	1180	2437	-3709	2
chr3	178248764	178248765	chunk0134_187_1	14.9872	AR_DHT_Control	chr3	178247764	178250120	-20045439	-	Tigger1	DNA	TcMar-Tigger	0	2418	1	2
chr3	178306831	178306832	chunk0134_191_1	12.9225	AR_DHT_Control	chr3	178306793	178307129	-19988430	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	2
chr3	178314244	178314245	chunk0134_192_1	4.33257	AR_DHT_Control	chr3	178314180	178314377	-19981182	-	L2c	LINE	L2	-8	3379	3167	2
chr3	178332505	178332506	chunk0134_194_1	10.231	AR_DHT_Control	chr3	178332305	178332656	-19962903	-	L1PA15	LINE	L1	0	6165	5804	2
chr3	178357753	178357754	chunk0134_195_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178356261	178359185	-19936374	+	L1MA7	LINE	L1	2210	5460	-831	2
chr3	178391892	178391893	chunk0134_197_1	6.86162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178391447	178391950	-19903609	+	L1M5	LINE	L1	5255	5789	-335	2
chr3	178454180	178454181	chunk0134_203_1	37.53104	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178454100	178454233	-19841326	-	L1ME1	LINE	L1	-718	5461	5325	2
chr3	178478761	178478762	chunk0134_205_1	32.116	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	178478411	178478775	-19816784	-	L2c	LINE	L2	-184	3203	2822	2
chr3	178613063	178613064	chunk0134_213_1	22.28011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	178611734	178613115	-19682444	-	L1MA1	LINE	L1	-2946	4619	3113	2
chr3	178618287	178618288	chunk0134_215_1	49.17147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	178618249	178618292	-19677267	+	(ATTATC)n	Simple_repeat	Simple_repeat	1	43	0	2
chr3	178895297	178895298	chunk0134_231_1	28.81262	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	178894851	178895837	-19399722	+	L1ME1	LINE	L1	4849	5922	-257	2
chr3	179037284	179037285	chunk0134_237_1	6.0927	AR_DHT_Control	chr3	179036742	179037622	-19257937	+	LTR27E	LTR	ERV1	1	1071	-6	2
chr3	179081980	179081981	chunk0134_239_1	21.91543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	179081804	179082006	-19213553	-	LTR23	LTR	ERV1	0	437	227	2
chr3	179137014	179137015	chunk0134_240_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	179136874	179138035	-19157524	+	L1P4b	LINE	L1	10	1126	-6208	2
chr3	179192665	179192666	chunk0134_242_1	44.9018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	179192588	179192812	-19102747	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr3	179305723	179305724	chunk0134_244_1	15.72732	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	179305304	179306519	-18989040	-	L1MEi	LINE	L1	-39	2468	1082	2
chr3	179322926	179322927	chunk0134_245_1	5.51262	AR_DHT_Control	chr3	179322882	179322934	-18972625	+	(GGCCGCG)n	Simple_repeat	Simple_repeat	1	55	0	2
chr3	179361443	179361444	chunk0134_250_1	70.4011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	179361316	179361538	-18934021	-	L1PA17	LINE	L1	-18	6148	5937	2
chr3	179431673	179431674	chunk0134_258_1	16.9488	AR_DHT_Control	chr3	179431573	179431864	-18863695	-	L1MC5a	LINE	L1	-498	2279	1992	2
chr3	179505778	179505779	chunk0134_264_1	17.059	AR_DHT_Control	chr3	179505704	179505988	-18789571	+	MLT1I	LTR	ERVL-MaLR	130	411	0	2
chr3	179533540	179533541	chunk0134_266_1	139.4404	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	179533214	179533951	-18761608	-	L1MC1	LINE	L1	-436	5897	5169	2
chr3	179545113	179545114	chunk0134_269_1	6.37684	AR_DHT_Control	chr3	179544953	179545174	-18750385	+	Tigger17a	DNA	TcMar-Tigger	468	654	0	2
chr3	179546944	179546945	chunk0134_270_1	9.1218	AR_DHT_Control	chr3	179546177	179547660	-18747899	+	L1M1	LINE	L1	809	2300	-5265	2
chr3	179556569	179556570	chunk0134_271_1	28.41085	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	179556121	179556751	-18738808	+	L1ME4b	LINE	L1	224	882	-10	2
chr3	179571947	179571948	chunk0134_273_1	26.678	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	179571450	179571985	-18723574	-	MER68	LTR	ERVL	-2	561	9	2
chr3	179837684	179837685	chunk0134_285_1	49.92755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	179837653	179838020	-18457539	+	MER65-int	LTR	ERV1	5266	5600	-587	2
chr3	179927570	179927571	chunk0134_291_1	6.6833	AR_DHT_Control	chr3	179927460	179927742	-18367817	+	MER5C	DNA	hAT-Charlie	3	292	-21	2
chr3	180045287	180045288	chunk0134_292_1	7.36432	AR_DHT_Control	chr3	180044874	180045521	-18250038	+	L2c	LINE	L2	2701	3387	0	2
chr3	180063954	180063955	chunk0134_294_1	94.0033	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	180063492	180064128	-18231431	+	L2c	LINE	L2	2735	3375	0	2
chr3	180165913	180165914	chunk0134_295_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	180161977	180166819	-18128740	-	L1PA17	LINE	L1	-958	4812	6	2
chr3	180169334	180169335	chunk0134_296_1	4.02808	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	180167813	180169683	-18125876	-	L1MA5A	LINE	L1	-4786	2063	12	2
chr3	180617405	180617406	chunk0134_300_1	16.72922	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	180617092	180618237	-17677322	+	Tigger3b	DNA	TcMar-Tigger	6	1231	0	2
chr3	180666774	180666775	chunk0134_302_1	33.9129	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	180666673	180667306	-17628253	+	L1MEh	LINE	L1	765	1730	-777	2
chr3	180837425	180837426	chunk0134_306_1	17.3852	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	180834697	180837708	-17457851	+	L1PA12	LINE	L1	2519	5557	-611	2
chr3	180845779	180845780	chunk0134_307_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	180845303	180845820	-17449739	-	L1MA8	LINE	L1	-5058	2508	1948	2
chr3	180862745	180862746	chunk0134_308_1	11.47427	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	180862529	180862796	-17432763	+	L1MEc	LINE	L1	2351	2628	-3691	2
chr3	180863767	180863768	chunk0134_310_1	11.8043	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	180863317	180863928	-17431631	+	L1MB8	LINE	L1	2683	3315	-2831	2
chr3	180992669	180992670	chunk0134_312_1	43.3577	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	180992307	180992755	-17302804	+	LTR33	LTR	ERVL	3	475	-40	2
chr3	181590779	181590780	chunk0134_315_1	12.1886	AR_DHT_Control	chr3	181585391	181591552	-16704007	-	L1PA5	LINE	L1	0	6154	4	2
chr3	181755149	181755150	chunk0134_317_1	4.84918	AR_DHT_Control	chr3	181755077	181755246	-16540313	+	MER53	DNA	hAT	5	193	0	2
chr3	181763826	181763827	chunk0134_318_1	12.1886	AR_DHT_Control	chr3	181763572	181763832	-16531727	-	L2a	LINE	L2	-204	3222	2995	2
chr3	181782359	181782360	chunk0134_319_1	4.83532	AR_DHT_Control	chr3	181782131	181783650	-16511909	-	HAL1	LINE	L1	-47	2460	822	2
chr3	181886442	181886443	chunk0134_327_1	18.28302	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	181886322	181886522	-16409037	+	L1ME4b	LINE	L1	690	891	-1	2
chr3	181947927	181947928	chunk0134_333_1	15.8739	AR_DHT_Control	chr3	181947864	181947929	-16347630	+	MIRb	SINE	MIR	116	182	-86	2
chr3	182571454	182571455	chunk0134_351_1	4.88663	AR_DHT_Control	chr3	182571436	182571501	-15724058	+	L2b	LINE	L2	3300	3364	-11	2
chr3	182605931	182605932	chunk0134_352_1	5.62266	AR_DHT_Control	chr3	182605792	182606853	-15688706	+	L1MC3	LINE	L1	6717	7785	0	2
chr3	182606339	182606340	chunk0134_353_1	9.66837	AR_DHT_Control	chr3	182605792	182606853	-15688706	+	L1MC3	LINE	L1	6717	7785	0	2
chr3	182642883	182642884	chunk0134_358_1	16.01427	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	182642819	182643019	-15652540	-	MIRc	SINE	MIR	0	268	40	2
chr3	182702475	182702476	chunk0134_367_1	5.89231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	182701503	182703173	-15592386	-	L1PB1	LINE	L1	-1	6150	4467	2
chr3	182707047	182707048	chunk0134_368_1	24.5949	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	182706556	182707784	-15587775	-	L1MEg	LINE	L1	-2556	3590	2323	2
chr3	182716925	182716926	chunk0134_370_1	28.6694	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	182716414	182719149	-15576410	-	LTR25-int	LTR	ERV1	-1	7187	4476	2
chr3	182777254	182777255	chunk0134_372_1	8.73763	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	182776925	182778127	-15517432	-	L1M2	LINE	L1	-5414	2152	719	2
chr3	182825202	182825203	chunk0134_381_1	255.8199	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr3	182825024	182825247	-15470312	+	L2c	LINE	L2	2925	3141	-246	2
chr3	182869745	182869746	chunk0134_384_1	25.5067	AR_DHT_Control	chr3	182869614	182870223	-15425336	+	L1MB7	LINE	L1	5507	6143	-41	2
chr3	183081657	183081658	chunk0134_397_1	14.2141	AR_DHT_Control	chr3	183081588	183082173	-15213386	+	LTR18B	LTR	ERVL	1	614	0	2
chr3	183108113	183108114	chunk0134_401_1	40.9906	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	183108057	183108260	-15187299	-	MER95	LTR	ERV1	-203	228	2	2
chr3	183155695	183155696	chunk0134_405_1	37.8047	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	183155687	183155824	-15139735	+	L2c	LINE	L2	3253	3387	0	2
chr3	183194041	183194042	chunk0134_409_1	16.17441	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	183193908	183194121	-15101438	-	L2c	LINE	L2	0	3387	3182	2
chr3	183275660	183275661	chunk0134_416_1	7.3092	AR_DHT_Control	chr3	183275601	183275925	-15019634	-	AluJo	SINE	Alu	-5	307	1	2
chr3	183409420	183409421	chunk0134_427_1	43.771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	183409344	183409543	-14886016	+	MIRb	SINE	MIR	36	260	-8	2
chr3	183689108	183689109	chunk0134_441_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	183688949	183689171	-14606388	-	L1M4	LINE	L1	-2152	5730	5525	2
chr3	183718147	183718148	chunk0134_443_1	18.08877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	183717984	183718208	-14577351	+	L1MA3	LINE	L1	6078	6305	0	2
chr3	183772967	183772968	chunk0134_447_1	8.96258	AR_DHT_Control	chr3	183772803	183773185	-14522374	-	MER2	DNA	TcMar-Tigger	-1	344	4	2
chr3	183980651	183980652	chunk0134_453_1	31.86408	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	183980567	183980709	-14314850	-	L3	LINE	CR1	-423	3676	3537	2
chr3	184011693	184011694	chunk0135_1_1	4.24356	AR_DHT_Control	chr3	184011316	184012009	-14283550	+	L1MD2	LINE	L1	5397	6129	-230	2
chr3	184012402	184012403	chunk0135_2_1	7.88169	AR_DHT_Control	chr3	184012372	184012531	-14283028	-	MIR	SINE	MIR	-2	260	84	2
chr3	184121191	184121192	chunk0135_8_1	69.3503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	184121157	184121240	-14174319	+	L1MB7	LINE	L1	5379	5460	-724	2
chr3	184211857	184211858	chunk0135_13_1	28.184	AR_DHT_Control	chr3	184211652	184212034	-14083525	-	L1M5	LINE	L1	-979	5167	4751	2
chr3	184275511	184275512	chunk0135_15_1	8.27376	AR_DHT_Control	chr3	184275428	184275534	-14020025	+	(GT)n	Simple_repeat	Simple_repeat	1	110	0	2
chr3	184519933	184519934	chunk0135_23_1	27.5422	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	184519802	184519952	-13775607	+	L1M5	LINE	L1	4242	4387	-1827	2
chr3	184718678	184718679	chunk0135_27_1	5.0408	AR_DHT_Control	chr3	184718540	184718816	-13576743	-	L2c	LINE	L2	-217	3170	2870	2
chr3	184806256	184806257	chunk0135_29_1	37.37854	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	184806234	184806324	-13489235	+	L2b	LINE	L2	3273	3359	-16	2
chr3	184970500	184970501	chunk0135_31_1	7.36432	AR_DHT_Control	chr3	184970292	184970585	-13324974	-	L2c	LINE	L2	-55	3332	3031	2
chr3	185173410	185173411	chunk0135_35_1	25.32882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	185173263	185173480	-13122079	-	MIRb	SINE	MIR	0	268	14	2
chr3	185341799	185341800	chunk0135_39_1	20.3327	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	185341744	185341954	-12953605	+	MER58A	DNA	hAT-Charlie	1	224	0	2
chr3	185424693	185424694	chunk0135_42_1	75.4499	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	185424504	185424697	-12870862	+	MER63A	DNA	hAT-Blackjack	8	210	0	2
chr3	185444501	185444502	chunk0135_43_1	8.09329	AR_DHT_Control	chr3	185444362	185444584	-12850975	-	L4_A_Mam	LINE	RTE-X	-98	4892	4667	2
chr3	185853899	185853900	chunk0135_65_1	27.0984	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	185853591	185853903	-12441656	-	AluSz	SINE	Alu	0	312	1	2
chr3	185866791	185866792	chunk0135_67_1	31.8477	AR_DHT_Control	chr3	185866380	185866801	-12428758	-	LTR16C	LTR	ERVL	-33	456	5	2
chr3	185994858	185994859	chunk0135_76_1	6.94032	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	185994785	185995356	-12300203	-	L2b	LINE	L2	-31	3356	2910	2
chr3	186117888	186117889	chunk0135_81_1	54.15406	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	186117792	186118151	-12177408	-	L2c	LINE	L2	-90	3297	2933	2
chr3	186415725	186415726	chunk0135_93_1	29.86336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	186415658	186416193	-11879366	+	L2b	LINE	L2	2332	2907	-512	2
chr3	186453964	186453965	chunk0135_95_1	9.35087	AR_DHT_Control	chr3	186453875	186454024	-11841535	-	L1MC4	LINE	L1	-217	7825	7680	2
chr3	186595925	186595926	chunk0135_99_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	186595881	186596007	-11699552	-	AluJo	SINE	Alu	-187	125	1	2
chr3	186605775	186605776	chunk0135_100_1	5.77445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	186605734	186605780	-11689779	-	L2c	LINE	L2	-43	3344	3298	2
chr3	186843230	186843231	chunk0135_108_1	6.44773	AR_DHT_Control	chr3	186843218	186843313	-11452246	-	L2b	LINE	L2	-1	3386	3301	2
chr3	186941597	186941598	chunk0135_112_1	62.17198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	186941309	186941730	-11353829	+	L3	LINE	CR1	3548	3999	-100	2
chr3	186969851	186969852	chunk0135_114_1	9.98452	AR_DHT_Control	chr3	186969632	186969853	-11325706	-	L2c	LINE	L2	-110	3277	3024	2
chr3	187069804	187069805	chunk0135_124_1	7.74912	AR_DHT_Control	chr3	187069714	187069807	-11225752	+	L2c	LINE	L2	2910	3012	-375	2
chr3	187132958	187132959	chunk0135_126_1	9.38217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	187132872	187133180	-11162379	+	L1MCc	LINE	L1	141	461	-5962	2
chr3	187263311	187263312	chunk0135_129_1	25.5832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	187263300	187263411	-11032148	+	L2a	LINE	L2	3298	3414	-12	2
chr3	187287934	187287935	chunk0135_133_1	85.13857	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	187287880	187288107	-11007452	+	L1ME4a	LINE	L1	5876	6122	-2	2
chr3	187336146	187336147	chunk0135_135_1	108.1389	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	187336143	187336337	-10959222	-	MIRc	SINE	MIR	-28	240	15	2
chr3	187389771	187389772	chunk0135_140_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	187388045	187390876	-10904683	+	L1PB1	LINE	L1	4004	6858	-9	2
chr3	187397153	187397154	chunk0135_141_1	7.62275	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	187397108	187397284	-10898275	-	MIRb	SINE	MIR	-67	201	28	2
chr3	187409141	187409142	chunk0135_142_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	187409135	187410897	-10884662	+	L1MEc	LINE	L1	37	1827	-4573	2
chr3	187730929	187730930	chunk0135_151_1	6.5005	AR_DHT_Control	chr3	187730743	187730969	-10564590	+	L3	LINE	CR1	3748	3998	-101	2
chr3	187959471	187959472	chunk0135_167_1	16.2208	AR_DHT_Control	chr3	187959428	187959612	-10335947	-	Charlie17a	DNA	hAT-Charlie	-3	214	29	2
chr3	188014900	188014901	chunk0135_168_1	13.0599	AR_DHT_Control	chr3	188013013	188016406	-10279153	-	L1MD1	LINE	L1	-1599	4938	1600	2
chr3	188040207	188040208	chunk0135_173_1	32.9105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	188040068	188040562	-10254997	-	L2a	LINE	L2	-1	3425	2913	2
chr3	188193154	188193155	chunk0135_188_1	15.7352	AR_DHT_Control	chr3	188193105	188193236	-10102323	+	MamRep605	LTR?	LTR?	476	607	-242	2
chr3	188221118	188221119	chunk0135_192_1	15.1095	AR_DHT_Control	chr3	188221067	188221313	-10074246	+	L2c	LINE	L2	2911	3167	-220	2
chr3	188231038	188231039	chunk0135_193_1	4.70357	AR_DHT_Control	chr3	188230807	188231282	-10064277	-	MLT1F2	LTR	ERVL-MaLR	-67	493	1	2
chr3	188257768	188257769	chunk0135_196_1	7.97093	AR_DHT_Control	chr3	188257689	188257930	-10037629	-	MIRb	SINE	MIR	0	268	8	2
chr3	188319688	188319689	chunk0135_208_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	188319678	188320154	-9975405	-	L1MD3	LINE	L1	-59	7936	7464	2
chr3	188417438	188417439	chunk0135_213_1	47.86596	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	188417194	188417461	-9878098	-	L2c	LINE	L2	-77	3310	3033	2
chr3	188516753	188516754	chunk0135_217_1	7.14145	AR_DHT_Control	chr3	188516721	188516889	-9778670	+	MER5A	DNA	hAT-Charlie	21	189	0	2
chr3	188528673	188528674	chunk0135_219_1	11.84729	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	188528564	188528792	-9766767	-	MIRc	SINE	MIR	-7	261	32	2
chr3	188571767	188571768	chunk0135_224_1	105.5782	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	188571664	188571839	-9723720	+	MIR	SINE	MIR	5	174	-88	2
chr3	188583599	188583600	chunk0135_225_1	19.92293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	188583274	188583731	-9711828	+	L2a	LINE	L2	2941	3419	-7	2
chr3	188786777	188786778	chunk0135_244_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	188786414	188787311	-9508248	+	L1MD2	LINE	L1	5491	6359	0	2
chr3	188863533	188863534	chunk0135_246_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	188863384	188863545	-9432014	+	MIR3	SINE	MIR	32	201	-7	2
chr3	189052247	189052248	chunk0135_258_1	30.782	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	189049850	189053089	-9242470	+	L1PB1	LINE	L1	3373	6614	-3	2
chr3	189061528	189061529	chunk0135_260_1	17.3852	AR_DHT_Control	chr3	189060260	189062453	-9233106	+	L1PREC2	LINE	L1	3960	6160	0	2
chr3	189078975	189078976	chunk0135_261_1	10.1096	AR_DHT_Control	chr3	189078927	189079358	-9216201	-	MSTB	LTR	ERVL-MaLR	0	426	1	2
chr3	189311634	189311635	chunk0135_275_1	24.2541	AR_DHT_Control	chr3	189311559	189311806	-8983753	-	LTR85a	LTR	Gypsy?	-15	687	440	2
chr3	189383921	189383922	chunk0135_279_1	38.4398	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	189383374	189384380	-8911179	-	L1MC1	LINE	L1	-5549	959	2	2
chr3	189396862	189396863	chunk0135_281_1	5.08049	AR_DHT_Control	chr3	189396733	189397025	-8898534	+	L1MC4	LINE	L1	6788	7077	-965	2
chr3	189430864	189430865	chunk0135_285_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	189430094	189431732	-8863827	+	L1PBa	LINE	L1	3	1637	-5226	2
chr3	189438205	189438206	chunk0135_286_1	27.27455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	189438049	189438527	-8857032	+	ERV3-16A3_I-int	LTR	ERVL	3638	4093	-1133	2
chr3	189483107	189483108	chunk0135_290_1	44.2804	AR_DHT_Control	chr3	189482995	189484014	-8811545	+	L1MC3	LINE	L1	6740	7771	-14	2
chr3	189517963	189517964	chunk0135_292_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	189516722	189519520	-8776039	+	L1M2a1	LINE	L1	3	2930	-4186	2
chr3	189586965	189586966	chunk0135_294_1	142.872	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	189586693	189587320	-8708239	-	L3	LINE	CR1	-143	3956	3245	2
chr3	189593581	189593582	chunk0135_295_1	7.63982	AR_DHT_Control	chr3	189590061	189594894	-8700665	+	L1MA9	LINE	L1	2	7272	0	2
chr3	189674506	189674507	chunk0135_297_1	7.09019	AR_DHT_Control	chr3	189674349	189674844	-8620715	-	LTR16E1	LTR	ERVL	-1	537	32	2
chr3	189713265	189713266	chunk0135_298_1	6.65967	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	189713195	189713276	-8582283	+	L2b	LINE	L2	3287	3374	-1	2
chr3	189718313	189718314	chunk0135_300_1	39.0016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	189718267	189718611	-8576948	-	THE1D	LTR	ERVL-MaLR	0	381	1	2
chr3	189815649	189815650	chunk0135_302_1	15.127	AR_DHT_Control	chr3	189815544	189815672	-8479887	-	MER102a	DNA	hAT-Charlie	-175	155	31	2
chr3	189903975	189903976	chunk0135_304_1	20.91911	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	189903928	189904140	-8391419	-	MIRb	SINE	MIR	-27	241	25	2
chr3	190044989	190044990	chunk0135_320_1	6.87382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	190044753	190045282	-8250277	-	L2a	LINE	L2	-4	3422	2857	2
chr3	190047452	190047453	chunk0135_321_1	7.10145	AR_DHT_Control	chr3	190046838	190047957	-8247602	+	L1MA5	LINE	L1	5089	6172	-128	2
chr3	190345672	190345673	chunk0135_342_1	4.36845	AR_DHT_Control	chr3	190345593	190345786	-7949773	+	MIR3	SINE	MIR	3	193	-15	2
chr3	190540941	190540942	chunk0135_354_1	6.13915	AR_DHT_Control	chr3	190540687	190541450	-7754109	-	MER67C	LTR	ERV1	0	711	1	2
chr3	190591274	190591275	chunk0135_357_1	10.0039	AR_DHT_Control	chr3	190591193	190591335	-7704224	-	MIRb	SINE	MIR	-30	238	59	2
chr3	190694005	190694006	chunk0135_363_1	27.16647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	190693845	190694176	-7601383	+	MER4D1	LTR	ERV1	510	903	0	2
chr3	190732142	190732143	chunk0135_366_1	20.2219	AR_DHT_Control	chr3	190731812	190732149	-7563410	-	MER61B	LTR	ERV1	0	427	1	2
chr3	190761019	190761020	chunk0135_369_1	103.71026	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	190760563	190761045	-7534514	-	MLT1D	LTR	ERVL-MaLR	-2	503	3	2
chr3	190874592	190874593	chunk0135_374_1	7.97917	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	190874496	190874618	-7420941	-	MLT1G1	LTR	ERVL-MaLR	-56	523	405	2
chr3	190899666	190899667	chunk0135_375_1	17.2107	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	190897944	190900700	-7394859	+	L1PB1	LINE	L1	4123	6867	0	2
chr3	190961478	190961479	chunk0135_376_1	35.4816	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	190961146	190961520	-7334039	-	MLT1I	LTR	ERVL-MaLR	-14	397	6	2
chr3	191025858	191025859	chunk0135_381_1	10.5437	AR_DHT_Control	chr3	191025773	191026496	-7269063	-	ERVL-B4-int	LTR	ERVL	-1411	4303	3530	2
chr3	191095957	191095958	chunk0135_382_1	8.58634	AR_DHT_Control	chr3	191095780	191096000	-7199559	+	Charlie10a	DNA	hAT-Charlie	59	280	0	2
chr3	191235768	191235769	chunk0135_383_1	5.82105	AR_DHT_Control	chr3	191235058	191235997	-7059562	-	LTR78	LTR	ERV1	-13	1291	295	2
chr3	191243628	191243629	chunk0135_384_1	5.88153	AR_DHT_Control	chr3	191243554	191243753	-7051806	-	L1MA9	LINE	L1	-5	6307	6090	2
chr3	191247683	191247684	chunk0135_385_1	63.3638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	191247625	191247732	-7047827	+	L2b	LINE	L2	3256	3364	-11	2
chr3	191296496	191296497	chunk0135_390_1	74.89124	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	191296293	191296610	-6998949	+	L2b	LINE	L2	3100	3374	-1	2
chr3	191302749	191302750	chunk0135_391_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	191302748	191303022	-6992537	+	LTR48	LTR	ERV1	1	301	-486	2
chr3	191801373	191801374	chunk0135_394_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	191801328	191802745	-6492814	+	L1MB3	LINE	L1	678	2115	-4734	2
chr3	192469628	192469629	chunk0135_400_1	28.29924	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	192469605	192470106	-5825453	+	L1ME5	LINE	L1	5589	6183	-11	2
chr3	192706428	192706429	chunk0135_408_1	9.07871	AR_DHT_Control	chr3	192706317	192706491	-5589068	-	MIR1_Amn	SINE	MIR	-25	183	8	2
chr3	192928815	192928816	chunk0135_415_1	32.7228	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	192928537	192928871	-5366688	-	MLT2C1	LTR	ERVL	-52	345	2	2
chr3	193802270	193802271	chunk0135_428_1	7.87199	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	193802121	193802493	-4493066	-	L1M5	LINE	L1	-3213	2933	2551	2
chr3	193824524	193824525	chunk0135_429_1	143.95373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	193824075	193824978	-4470581	-	L1ME2	LINE	L1	0	6164	5279	2
chr3	193850914	193850915	chunk0135_433_1	28.607	AR_DHT_Control	chr3	193850874	193851260	-4444299	+	L1ME4a	LINE	L1	5694	6124	0	2
chr3	194075517	194075518	chunk0135_443_1	21.90753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	194075285	194075792	-4219767	+	L1ME2	LINE	L1	5607	6167	-277	2
chr3	194243499	194243500	chunk0135_449_1	6.13992	AR_DHT_Control	chr3	194243178	194243773	-4051786	+	L1MC1	LINE	L1	5483	6067	-441	2
chr3	194352102	194352103	chunk0136_263_1	4.73472	AR_DHT_Control	chr3	194351936	194352970	-3942589	+	(GT)n	Simple_repeat	Simple_repeat	1	1056	0	2
chr3	194375723	194375724	chunk0136_264_1	9.06816	AR_DHT_Control	chr3	194375634	194375771	-3919788	+	MIRb	SINE	MIR	115	255	-13	2
chr3	194817431	194817432	chunk0136_281_1	34.65632	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	194817252	194817444	-3478115	-	L3	LINE	CR1	-2306	1793	1591	2
chr3	194851457	194851458	chunk0136_283_1	65.87989	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	194851393	194851494	-3444065	+	L2	LINE	L2	53	148	-3271	2
chr3	194854359	194854360	chunk0136_286_1	20.17523	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	194854278	194854415	-3441144	-	L1M5	LINE	L1	-1145	5001	4856	2
chr3	195095085	195095086	chunk0136_299_1	4.73472	SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	195094961	195095102	-3200457	-	MER5A1	DNA	hAT-Charlie	0	166	2	2
chr3	195111133	195111134	chunk0136_301_1	5.51891	AR_DHT_Control	chr3	195110963	195111412	-3184147	-	MLT1C	LTR	ERVL-MaLR	-2	465	1	2
chr3	195134564	195134565	chunk0136_302_1	6.98722	AR_DHT_Control	chr3	195134539	195134601	-3160958	-	Tigger3c	DNA	TcMar-Tigger	-128	474	413	2
chr3	195143463	195143464	chunk0136_303_1	104.9448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	195143322	195143518	-3152041	+	MER102b	DNA	hAT-Charlie	1	201	-140	2
chr3	195372157	195372158	chunk0136_318_1	17.05901	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	195372050	195372412	-2923147	+	Charlie17	DNA	hAT-Charlie	1114	1496	-1420	2
chr3	195380092	195380093	chunk0136_320_1	113.59837	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	195379815	195380206	-2915353	+	L1M4	LINE	L1	5333	5705	-475	2
chr3	195419494	195419495	chunk0136_324_1	15.5235	AR_DHT_Control	chr3	195419429	195419546	-2876013	-	HY1	scRNA	scRNA	0	119	1	2
chr3	195605231	195605232	chunk0136_332_1	19.933	AR_DHT_Control	chr3	195605119	195605993	-2689566	+	MER4-int	LTR	ERV1	1600	2658	-3940	2
chr3	195696239	195696240	chunk0136_335_1	37.6316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	195695882	195696377	-2599182	-	L1PA7	LINE	L1	-457	5697	5190	2
chr3	195700072	195700073	chunk0136_338_1	217.2831	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	195699581	195700246	-2595313	-	Tigger3b	DNA	TcMar-Tigger	-638	593	2	2
chr3	195718555	195718556	chunk0136_340_1	40.1377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	195718522	195718895	-2576664	+	MER4-int	LTR	ERV1	1845	2165	-4166	2
chr3	195736488	195736489	chunk0136_343_1	8.18946	AR_DHT_Control	chr3	195736136	195736557	-2559002	+	L1M5	LINE	L1	5215	5666	-458	2
chr3	195760421	195760422	chunk0136_347_1	22.8122	AR_DHT_Control	chr3	195760070	195760497	-2535062	-	L2a	LINE	L2	-2	3424	2933	2
chr3	195850947	195850948	chunk0136_349_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	195850782	195850976	-2444583	+	MIRb	SINE	MIR	21	223	-45	2
chr3	195906378	195906379	chunk0136_356_1	97.2589	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	195905498	195906779	-2388780	+	L1ME1	LINE	L1	4848	6177	-2	2
chr3	196012626	196012627	chunk0136_361_1	6.48643	AR_DHT_Control	chr3	196010479	196012836	-2282723	+	L1MEf	LINE	L1	2624	5488	-1056	2
chr3	196021898	196021899	chunk0136_363_1	121.1736	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr3	196021043	196021930	-2273629	+	L1MC2	LINE	L1	4783	5706	-638	2
chr3	196048655	196048656	chunk0136_365_1	34.4126	AR_DHT_Control	chr3	196048618	196049274	-2246285	+	L1MC1	LINE	L1	5624	6333	0	2
chr3	196073416	196073417	chunk0136_366_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	196073253	196073437	-2222122	+	AluJb	SINE	Alu	82	282	-30	2
chr3	196361746	196361747	chunk0136_375_1	21.4359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	196360980	196361824	-1933735	+	Tigger1	DNA	TcMar-Tigger	1496	2394	-24	2
chr3	196603807	196603808	chunk0136_380_1	6.13992	AR_DHT_Control	chr3	196603768	196603993	-1691566	+	LTR57	LTR	ERVL	1	223	-188	2
chr3	196793394	196793395	chunk0136_388_1	10.5302	AR_DHT_Control	chr3	196792717	196793853	-1501706	+	HAL1	LINE	L1	3	1135	-1372	2
chr3	196970886	196970887	chunk0136_394_1	131.9228	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr3	196970716	196971576	-1323983	-	MER54A	LTR	ERVL	0	901	3	2
chr3	197195681	197195682	chunk0136_399_1	7.36432	AR_DHT_Control	chr3	197195352	197195893	-1099666	+	L1PA16	LINE	L1	5621	6161	-5	2
chr3	197241018	197241019	chunk0136_406_1	10.9705	AR_DHT_Control	chr3	197239693	197242805	-1052754	+	L1M3f	LINE	L1	1240	4445	-3117	2
chr3	197317349	197317350	chunk0136_407_1	4.81216	AR_DHT_Control	chr3	197317256	197317441	-978118	-	MIRc	SINE	MIR	-12	256	27	2
chr3	197329989	197329990	chunk0136_408_1	19.39223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	197329900	197330002	-965557	-	L1ME4a	LINE	L1	-45	6079	5969	2
chr3	197361987	197361988	chunk0136_411_1	28.7628	AR_DHT_Control	chr3	197361968	197362178	-933381	-	MER3	DNA	hAT-Charlie	0	209	1	2
chr3	197539930	197539931	chunk0136_423_1	7.09019	AR_DHT_Control	chr3	197539437	197540002	-755557	+	LTR8	LTR	ERV1	140	691	0	2
chr3	197587399	197587400	chunk0136_425_1	21.63683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	197587254	197587662	-707897	-	L1MEc	LINE	L1	-4365	2035	1633	2
chr3	197609467	197609468	chunk0136_428_1	12.3561	SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	197609351	197609870	-685689	+	L1MA3	LINE	L1	4085	4500	-1646	2
chr3	197823922	197823923	chunk0136_438_1	95.1335	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr3	197823789	197824063	-471496	-	HAL1	LINE	L1	-165	2342	2069	2
chr3	197874817	197874818	chunk0136_439_1	18.93159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr3	197874786	197874923	-420636	+	MER58A	DNA	hAT-Charlie	3	153	-71	2
chr3	197926739	197926740	chunk0136_442_1	5.6425	AR_DHT_Control	chr3	197926548	197926950	-368609	+	LTR16B2	LTR	ERVL	1	462	0	2
chr3	197961052	197961053	chunk0136_446_1	6.58498	AR_DHT_Control	chr3	197960985	197961316	-334243	+	L2c	LINE	L2	3051	3377	-10	2
chr3	197994975	197994976	chunk0136_449_1	14.3818	AR_DHT_Control	chr3	197994708	197994998	-300561	+	L1MA7	LINE	L1	5490	5787	-504	2
chr3	198000798	198000799	chunk0136_450_1	15.3744	AR_DHT_Control	chr3	198000727	198000818	-294741	+	MIR	SINE	MIR	160	251	-11	2
chr4	41180	41181	chunk0136_7_1	69.2606	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	40540	41494	-190173061	-	LTR5B	LTR	ERVK	0	1002	13	2
chr4	62241	62242	chunk0136_13_1	220.8459	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	61894	62601	-190151954	-	L1MA9	LINE	L1	-50	6284	5518	2
chr4	95104	95105	chunk0136_15_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	94965	95288	-190119267	+	MER61C	LTR	ERV1	84	422	-6	2
chr4	429484	429485	chunk0136_18_1	20.9004	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	429081	429556	-189784999	-	L1MB2	LINE	L1	-4	6167	5665	2
chr4	451152	451153	chunk0136_20_1	6.48643	AR_DHT_Control	chr4	450996	451171	-189763384	+	L1MB2	LINE	L1	5649	5838	-345	2
chr4	617808	617809	chunk0136_22_1	7.36432	AR_DHT_Control	chr4	617716	618131	-189596424	+	MER70B	LTR	ERVL	1	431	-147	2
chr4	694437	694438	chunk0136_27_1	8.0668	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	694299	694889	-189519666	+	LTR10C	LTR	ERV1	1	591	0	2
chr4	869935	869936	chunk0136_31_1	7.03383	AR_DHT_Control	chr4	868900	870157	-189344398	+	(CACA)n	Simple_repeat	Simple_repeat	1	1262	0	2
chr4	887690	887691	chunk0136_32_1	6.96641	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	886984	887914	-189326641	+	(GCACAC)n	Simple_repeat	Simple_repeat	1	954	0	2
chr4	986504	986505	chunk0136_33_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	986295	986596	-189227959	-	MER2	DNA	TcMar-Tigger	0	345	6	2
chr4	1115734	1115735	chunk0136_36_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	1115693	1115818	-189098737	-	MIRb	SINE	MIR	0	268	117	2
chr4	1152411	1152412	chunk0136_37_1	8.06786	AR_DHT_Control	chr4	1152399	1152629	-189061926	-	MIR	SINE	MIR	-21	241	21	2
chr4	1155499	1155500	chunk0136_40_1	70.5668	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	1155283	1155525	-189059030	+	MIR	SINE	MIR	8	262	0	2
chr4	1160555	1160556	chunk0136_42_1	150.2463	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	1160005	1160894	-189053661	+	L1MEc	LINE	L1	2196	3200	-3119	2
chr4	1203615	1203616	chunk0136_45_1	7.29426	AR_DHT_Control	chr4	1203263	1203868	-189010687	-	L1MB7	LINE	L1	-192	5997	5334	2
chr4	1541504	1541505	chunk0136_53_1	82.16959	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	1541466	1541643	-188672912	-	L1MB5	LINE	L1	0	6174	5990	2
chr4	1708856	1708857	chunk0136_59_1	24.03285	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	1708837	1708899	-188505656	-	L2	LINE	L2	-363	3056	2990	2
chr4	2068501	2068502	chunk0136_72_1	5.56714	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	2068098	2068662	-188145893	+	(TG)n	Simple_repeat	Simple_repeat	1	570	0	2
chr4	2101870	2101871	chunk0136_73_1	7.33982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	2101269	2104232	-188110323	+	L1M2	LINE	L1	10	2867	-3982	2
chr4	2185977	2185978	chunk0136_74_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	2185921	2187230	-188027325	+	L1MA4	LINE	L1	1251	2600	-4965	2
chr4	2222349	2222350	chunk0136_77_1	23.99457	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	2222273	2222531	-187992024	+	AluJb	SINE	Alu	1	301	-11	2
chr4	2223552	2223553	chunk0136_78_1	14.2256	AR_DHT_Control	chr4	2223240	2223579	-187990976	+	MER1B	DNA	hAT-Charlie	1	339	0	2
chr4	2235866	2235867	chunk0136_80_1	86.7546	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	2235687	2236022	-187978533	+	L1ME3D	LINE	L1	5906	6225	-18	2
chr4	2430659	2430660	chunk0136_82_1	18.5977	AR_DHT_Control	chr4	2430656	2430788	-187783767	+	FLAM_A	SINE	Alu	1	129	-13	2
chr4	2480959	2480960	chunk0136_83_1	7.36432	AR_DHT_Control	chr4	2480883	2481421	-187733134	+	Tigger9b	DNA	TcMar-Tigger	5	616	-8	2
chr4	2534050	2534051	chunk0136_87_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	2534017	2534290	-187680265	-	AluSx1	SINE	Alu	-11	301	1	2
chr4	2615204	2615205	chunk0136_91_1	151.2325	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	2615125	2615224	-187599331	-	HY3	scRNA	scRNA	-1	100	1	2
chr4	2858864	2858865	chunk0136_96_1	6.25666	AR_DHT_Control	chr4	2858831	2858977	-187355578	-	MIRb	SINE	MIR	0	268	119	2
chr4	3343594	3343595	chunk0136_112_1	9.01771	AR_DHT_Control	chr4	3343442	3344000	-186870555	-	L1MC2	LINE	L1	-6	6338	5918	2
chr4	3354610	3354611	chunk0136_113_1	6.48643	AR_DHT_Control	chr4	3354417	3354930	-186859625	+	L1ME3B	LINE	L1	2637	3193	-2953	2
chr4	3362965	3362966	chunk0136_114_1	6.62034	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	3362336	3363185	-186851370	+	(GT)n	Simple_repeat	Simple_repeat	1	855	0	2
chr4	3468996	3468997	chunk0136_118_1	6.43609	AR_DHT_Control	chr4	3468346	3469241	-186745314	+	(TGCG)n	Simple_repeat	Simple_repeat	1	905	0	2
chr4	3495110	3495111	chunk0136_119_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	3495016	3495220	-186719335	+	MIRb	SINE	MIR	4	233	-35	2
chr4	3637736	3637737	chunk0136_121_1	9.92883	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	3637683	3637889	-186576666	+	L1MEc	LINE	L1	34	254	-6146	2
chr4	3714604	3714605	chunk0136_123_1	5.9729	AR_DHT_Control	chr4	3714212	3715026	-186499529	+	(GT)n	Simple_repeat	Simple_repeat	1	823	0	2
chr4	3745898	3745899	chunk0136_126_1	5.37069	AR_DHT_Control	chr4	3745864	3746117	-186468438	+	L1MC4	LINE	L1	5852	6048	-1834	2
chr4	3932155	3932156	chunk0136_135_1	19.24119	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	3932075	3932291	-186282264	+	HERVH-int	LTR	ERV1	5600	5819	-1894	2
chr4	4477983	4477984	chunk0136_139_1	9.19742	AR_DHT_Control	chr4	4477875	4478111	-185736444	-	MIRb	SINE	MIR	-13	255	10	2
chr4	4507166	4507167	chunk0136_142_1	7.36432	AR_DHT_Control	chr4	4507164	4507255	-185707300	+	Tigger5	DNA	TcMar-Tigger	132	235	-2171	2
chr4	4619035	4619036	chunk0136_147_1	11.77534	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	4618779	4619326	-185595229	-	MLT1G1	LTR	ERVL-MaLR	0	579	2	2
chr4	4643926	4643927	chunk0136_149_1	29.43448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	4643692	4644216	-185570339	-	LTR10C	LTR	ERV1	0	591	11	2
chr4	4773667	4773668	chunk0136_153_1	12.2728	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	4773298	4774027	-185440528	+	Charlie1a	DNA	hAT-Charlie	618	1415	-40	2
chr4	4794428	4794429	chunk0136_154_1	5.6425	AR_DHT_Control	chr4	4794349	4794454	-185420101	+	L2	LINE	L2	2754	2861	-558	2
chr4	5680384	5680385	chunk0136_158_1	6.48643	AR_DHT_Control	chr4	5679810	5680524	-184534031	-	Tigger3b	DNA	TcMar-Tigger	-509	722	2	2
chr4	5703491	5703492	chunk0136_159_1	8.96258	AR_DHT_Control	chr4	5703485	5703576	-184510979	-	MIR3	SINE	MIR	-110	98	8	2
chr4	6165741	6165742	chunk0136_164_1	33.81049	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	6165600	6165800	-184048755	+	Tigger1	DNA	TcMar-Tigger	2220	2418	0	2
chr4	6186551	6186552	chunk0136_167_1	13.50011	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	6186483	6186827	-184027728	-	L1M4b	LINE	L1	-3319	3687	3366	2
chr4	6382890	6382891	chunk0136_170_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	6382676	6382938	-183831617	+	L2a	LINE	L2	2572	2887	-532	2
chr4	6506066	6506067	chunk0136_174_1	9.01771	AR_DHT_Control	chr4	6506003	6506351	-183708204	+	L1ME2	LINE	L1	2038	2044	-4198	2
chr4	6556540	6556541	chunk0136_176_1	4.77556	AR_DHT_Control	chr4	6556113	6556573	-183657982	+	MLT2B1	LTR	ERVL	2	520	0	2
chr4	6561259	6561260	chunk0136_177_1	5.6503	AR_DHT_Control	chr4	6561254	6561458	-183653097	+	MER45C	DNA	hAT-Tip100	730	953	0	2
chr4	6696419	6696420	chunk0136_179_1	39.50551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	6696328	6696499	-183518056	+	MIRb	SINE	MIR	50	233	-35	2
chr4	6704417	6704418	chunk0136_182_1	16.51758	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	6703838	6704477	-183510078	+	Tigger17a	DNA	TcMar-Tigger	3	654	0	2
chr4	6792215	6792216	chunk0136_191_1	22.0243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	6792176	6792352	-183422203	-	L1ME4b	LINE	L1	-2062	5820	5671	2
chr4	7131191	7131192	chunk0136_208_1	4.40478	AR_DHT_Control	chr4	7130650	7132083	-183082472	+	(TG)n	Simple_repeat	Simple_repeat	1	1543	0	2
chr4	7786797	7786798	chunk0136_217_1	6.35715	AR_DHT_Control	chr4	7786794	7786867	-182427688	+	MER58B	DNA	hAT-Charlie	268	341	0	2
chr4	7805796	7805797	chunk0136_218_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	7805681	7805803	-182408752	-	L2b	LINE	L2	-7	3380	3260	2
chr4	8116162	8116163	chunk0136_220_1	18.2528	AR_DHT_Control	chr4	8115646	8116236	-182098319	+	MLT1G1	LTR	ERVL-MaLR	1	577	-2	2
chr4	8183645	8183646	chunk0136_224_1	7.87199	AR_DHT_Control	chr4	8183599	8183876	-182030679	-	L1MC3	LINE	L1	0	7785	7510	2
chr4	8228855	8228856	chunk0136_225_1	24.28212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	8228834	8228945	-181985610	+	MER81	DNA	hAT-Blackjack	1	114	0	2
chr4	8439288	8439289	chunk0136_234_1	15.47659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	8439244	8439749	-181774806	+	HERV3-int	LTR	ERV1	7012	7604	-209	2
chr4	8792451	8792452	chunk0136_237_1	6.79459	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	8792056	8792855	-181421700	+	(CA)n	Simple_repeat	Simple_repeat	1	799	0	2
chr4	8918264	8918265	chunk0136_240_1	9.13774	AR_DHT_Control	chr4	8918260	8918428	-181296127	+	MER53	DNA	hAT	13	184	-9	2
chr4	9979417	9979418	chunk0136_241_1	12.4335	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	9979323	9979430	-180235125	+	L2a	LINE	L2	3277	3402	-24	2
chr4	10102942	10102943	chunk0136_247_1	9.40261	AR_DHT_Control	chr4	10102936	10102967	-180111588	+	(ATGA)n	Simple_repeat	Simple_repeat	1	31	0	2
chr4	10174427	10174428	chunk0136_252_1	14.87251	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	10174126	10174596	-180039959	-	MER9B	LTR	ERVK	0	499	1	2
chr4	10293243	10293244	chunk0136_254_1	6.54253	AR_DHT_Control	chr4	10292830	10293284	-179921271	+	LTR46	LTR	ERV1	1	460	0	2
chr4	10296745	10296746	chunk0136_256_1	28.1931	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	10296531	10296959	-179917596	-	MER9B	LTR	ERVK	0	499	1	2
chr4	10421932	10421933	chunk0136_259_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	10421810	10421939	-179792616	+	MER68	LTR	ERVL	6	147	-416	2
chr4	10422296	10422297	chunk0136_260_1	7.36432	AR_DHT_Control	chr4	10421955	10422301	-179792254	+	MER68	LTR	ERVL	222	563	0	2
chr4	10496738	10496739	chunk0137_3_1	93.1374	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	10496661	10497054	-179717501	+	MER51B	LTR	ERV1	2	375	-2	2
chr4	10530515	10530516	chunk0137_6_1	348.7196	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	10530408	10530688	-179683867	+	MamRep1527	LTR	LTR	108	418	-551	2
chr4	10797890	10797891	chunk0137_15_1	9.30518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	10796287	10798776	-179415779	+	L1PB1	LINE	L1	3621	6138	-13	2
chr4	10935533	10935534	chunk0137_24_1	46.95374	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	10935490	10935651	-179278904	+	MER58B	DNA	hAT-Charlie	180	341	0	2
chr4	10964058	10964059	chunk0137_28_1	6.3364	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	10964042	10964123	-179250432	+	(CATGCACACA)n	Simple_repeat	Simple_repeat	1	81	0	2
chr4	11049008	11049009	chunk0137_31_1	90.3059	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	11048760	11049033	-179165522	+	L1MA10	LINE	L1	6059	6324	-10	2
chr4	11281725	11281726	chunk0137_34_1	113.65104	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	11281712	11281865	-178932690	+	MIRb	SINE	MIR	60	229	-39	2
chr4	11344354	11344355	chunk0137_36_1	200.6254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	11344227	11344801	-178869754	+	Tigger9b	DNA	TcMar-Tigger	2	623	-1	2
chr4	11408317	11408318	chunk0137_38_1	18.2513	AR_DHT_Control	chr4	11408127	11408330	-178806225	+	MIRb	SINE	MIR	32	260	-8	2
chr4	11727845	11727846	chunk0137_57_1	28.646	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	11727420	11728186	-178486369	+	L1ME2	LINE	L1	5371	6145	-19	2
chr4	11840144	11840145	chunk0137_61_1	5.84343	AR_DHT_Control	chr4	11839958	11840254	-178374301	-	L2c	LINE	L2	-26	3361	3035	2
chr4	11842820	11842821	chunk0137_63_1	36.975	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	11842744	11843075	-178371480	-	Tigger3a	DNA	TcMar-Tigger	-12	336	4	2
chr4	11891257	11891258	chunk0137_65_1	17.983	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	11887144	11891981	-178322574	+	L1MB8	LINE	L1	17	4867	-2139	2
chr4	11904354	11904355	chunk0137_67_1	15.60814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	11904275	11904514	-178310041	+	MIR	SINE	MIR	10	262	0	2
chr4	12861630	12861631	chunk0137_73_1	307.2928	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr4	12861443	12861748	-177352807	+	L2c	LINE	L2	3008	3387	0	2
chr4	12957440	12957441	chunk0137_78_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	12957368	12957618	-177256937	+	MIR	SINE	MIR	4	262	0	2
chr4	13109705	13109706	chunk0137_83_1	21.4911	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13109270	13109804	-177104751	+	MLT2B4	LTR	ERVL	2	556	0	2
chr4	13127318	13127319	chunk0137_84_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13127219	13127420	-177087135	+	MIRc	SINE	MIR	61	267	-1	2
chr4	13235180	13235181	chunk0137_88_1	20.0198	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13233996	13236022	-176978533	+	L1PB3	LINE	L1	4157	6152	-2	2
chr4	13386177	13386178	chunk0137_93_1	74.9863	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	13386142	13387257	-176827298	+	L1PA13	LINE	L1	5645	6781	-2	2
chr4	13432289	13432290	chunk0137_96_1	36.9781	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13430216	13433247	-176781308	+	L1PA17	LINE	L1	353	3171	-3744	2
chr4	13433139	13433140	chunk0137_97_1	7.70585	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13430216	13433247	-176781308	+	L1PA17	LINE	L1	353	3171	-3744	2
chr4	13461670	13461671	chunk0137_100_1	11.872	AR_DHT_Control	chr4	13461309	13461673	-176752882	-	Plat_L3	LINE	CR1	-232	3354	2990	2
chr4	13671014	13671015	chunk0137_104_1	21.849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	13670723	13671127	-176543428	-	MLT1B	LTR	ERVL-MaLR	-2	388	3	2
chr4	13723506	13723507	chunk0137_106_1	15.15667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	13723113	13724179	-176490376	-	L1MD1	LINE	L1	0	6242	5182	2
chr4	14668114	14668115	chunk0137_120_1	17.06701	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	14668012	14668459	-175546096	+	L2c	LINE	L2	2933	3387	0	2
chr4	15032838	15032839	chunk0137_128_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	15032810	15032846	-175181709	+	A-rich	Low_complexity	Low_complexity	1	38	0	2
chr4	15650408	15650409	chunk0137_143_1	133.8642	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	15650352	15650500	-174564055	-	MER112	DNA	hAT-Charlie	-101	160	2	2
chr4	15661359	15661360	chunk0137_146_1	7.2534	AR_DHT_Control	chr4	15661325	15661434	-174553121	+	MIR	SINE	MIR	121	259	-3	2
chr4	15694671	15694672	chunk0137_149_1	18.58957	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	15694466	15695719	-174518836	-	HERVIP10FH-int	LTR	ERV1	0	5102	3860	2
chr4	15723620	15723621	chunk0137_152_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	15723550	15723848	-174490707	-	L1ME3A	LINE	L1	-454	470	245	2
chr4	15765953	15765954	chunk0137_153_1	24.4536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	15765121	15765997	-174448558	+	L2a	LINE	L2	2403	3423	-3	2
chr4	15821456	15821457	chunk0137_155_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	15819341	15824295	-174390260	+	L1PA10	LINE	L1	1310	6329	-24	2
chr4	16110646	16110647	chunk0137_163_1	61.65463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	16110482	16110660	-174103895	-	L2b	LINE	L2	-5	3421	3233	2
chr4	16550793	16550794	chunk0137_169_1	109.1075	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	16550570	16551188	-173663367	+	L1ME3C	LINE	L1	5425	6074	-49	2
chr4	17432710	17432711	chunk0137_175_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	17432005	17433732	-172780823	+	L1PB3	LINE	L1	4402	6152	-2	2
chr4	17463898	17463899	chunk0137_176_1	24.51754	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	17463718	17464191	-172750364	+	MER67A	LTR	ERV1	1	483	-60	2
chr4	17512999	17513000	chunk0137_180_1	9.39801	AR_DHT_Control	chr4	17512938	17513040	-172701515	+	L2c	LINE	L2	3289	3382	-5	2
chr4	17544943	17544944	chunk0137_183_1	17.67853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	17544880	17545069	-172669486	-	L2a	LINE	L2	-9	3417	3149	2
chr4	17741167	17741168	chunk0137_187_1	33.2529	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	17741046	17741385	-172473170	-	L2a	LINE	L2	-1	3425	3067	2
chr4	17753710	17753711	chunk0137_190_1	28.46957	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	17753648	17754127	-172460428	-	LTR47B3	LTR	ERVL	0	464	1	2
chr4	17856895	17856896	chunk0137_193_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	17856794	17857058	-172357497	+	L2c	LINE	L2	3105	3426	0	2
chr4	18213348	18213349	chunk0137_205_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	18213347	18213852	-172000703	-	L1PA15	LINE	L1	-5492	1294	352	2
chr4	18710859	18710860	chunk0137_208_1	15.8865	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	18710695	18710977	-171503578	+	HAL1	LINE	L1	2111	2416	-91	2
chr4	18729798	18729799	chunk0137_210_1	54.46392	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	18729680	18729892	-171484663	+	MER58A	DNA	hAT-Charlie	12	224	0	2
chr4	19482890	19482891	chunk0137_214_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	19482526	19483024	-170731531	-	Helitron1Na_Mam	RC	Helitron	-493	569	105	2
chr4	19615482	19615483	chunk0137_215_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	19614552	19617282	-170597273	+	L1PB4	LINE	L1	1	2878	-3971	2
chr4	19767821	19767822	chunk0137_217_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	19767763	19768517	-170446038	-	L1M2	LINE	L1	-6408	1158	360	2
chr4	19826227	19826228	chunk0137_218_1	30.3762	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	19825891	19826423	-170388132	-	L4_A_Mam	LINE	RTE-X	-2	4988	4398	2
chr4	19983956	19983957	chunk0137_220_1	29.51384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	19983628	19985923	-170228632	-	L1MD1	LINE	L1	-2	6631	4361	2
chr4	20009845	20009846	chunk0137_223_1	19.92487	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	20009663	20009886	-170204669	-	MER20	DNA	hAT-Charlie	0	219	1	2
chr4	20053133	20053134	chunk0137_226_1	32.2497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	20053072	20053591	-170160964	-	L2a	LINE	L2	0	3426	2787	2
chr4	20168690	20168691	chunk0137_230_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	20168657	20168697	-170045858	+	(TG)n	Simple_repeat	Simple_repeat	1	41	0	2
chr4	20429582	20429583	chunk0137_238_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	20429390	20429928	-169784627	-	L2a	LINE	L2	-1	3425	2839	2
chr4	20537227	20537228	chunk0137_240_1	27.1741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	20536585	20537410	-169677145	-	Tigger3b	DNA	TcMar-Tigger	-424	807	1	2
chr4	20639583	20639584	chunk0137_248_1	311.7725	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr4	20639513	20639667	-169574888	-	L2c	LINE	L2	-40	3347	3185	2
chr4	20856492	20856493	chunk0137_254_1	31.3831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	20856297	20856577	-169357978	+	L2c	LINE	L2	3055	3347	-40	2
chr4	21898090	21898091	chunk0137_261_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	21897687	21899083	-168315472	+	L1M1	LINE	L1	10	1460	-6105	2
chr4	22041787	22041788	chunk0137_262_1	17.6003	AR_DHT_Control	chr4	22041431	22042506	-168172049	-	ERVL-E-int	LTR	ERVL	-450	5264	4093	2
chr4	22137565	22137566	chunk0137_263_1	7.97917	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	22136763	22137966	-168076589	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	2
chr4	22202253	22202254	chunk0137_265_1	17.8311	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	22202252	22202658	-168011897	+	MLT1J2-int	LTR	ERVL-MaLR	979	1407	-2	2
chr4	22445589	22445590	chunk0137_267_1	7.36432	AR_DHT_Control	chr4	22445429	22445730	-167768825	+	L2c	LINE	L2	3062	3370	-17	2
chr4	22480249	22480250	chunk0137_268_1	102.4862	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	22480157	22480391	-167734164	+	L1M5	LINE	L1	5299	5561	-2321	2
chr4	22979926	22979927	chunk0137_277_1	26.6267	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	22977578	22983111	-167231444	+	L1PBb	LINE	L1	56	4759	-2156	2
chr4	23951322	23951323	chunk0137_291_1	23.3622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	23951033	23951410	-166263145	-	L2b	LINE	L2	-5	3370	2932	2
chr4	23982659	23982660	chunk0137_296_1	27.5222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	23982652	23982869	-166231686	+	MIRb	SINE	MIR	47	262	0	2
chr4	24076839	24076840	chunk0137_302_1	23.18313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	24076733	24077624	-166136931	-	HAL1	LINE	L1	-214	2293	1374	2
chr4	24550200	24550201	chunk0137_316_1	12.8531	AR_DHT_Control	chr4	24550123	24551048	-165663507	-	Tigger3b	DNA	TcMar-Tigger	-283	948	2	2
chr4	24775055	24775056	chunk0137_321_1	30.52	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	24775003	24775208	-165439347	+	L1ME4b	LINE	L1	397	604	-288	2
chr4	24782497	24782498	chunk0137_324_1	24.47489	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	24782486	24782699	-165431856	+	MLT1K	LTR	ERVL-MaLR	57	285	-310	2
chr4	24840498	24840499	chunk0137_332_1	4.89474	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	24840359	24840991	-165373564	+	Tigger17a	DNA	TcMar-Tigger	5	625	-29	2
chr4	24973530	24973531	chunk0137_336_1	45.0127	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	24973484	24973782	-165240773	+	MLT1K	LTR	ERVL-MaLR	282	586	-9	2
chr4	25208228	25208229	chunk0137_344_1	12.8082	AR_DHT_Control	chr4	25208115	25208407	-165006148	-	L2b	LINE	L2	0	3375	3091	2
chr4	25446031	25446032	chunk0137_351_1	25.68045	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	25445834	25446091	-164768464	+	L2a	LINE	L2	3121	3383	-43	2
chr4	25702796	25702797	chunk0137_354_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	25702706	25702856	-164511699	-	MLT1B	LTR	ERVL-MaLR	-213	177	27	2
chr4	25942726	25942727	chunk0137_360_1	11.2788	AR_DHT_Control	chr4	25942635	25942804	-164271751	+	LTR16C	LTR	ERVL	374	565	-3	2
chr4	26124845	26124846	chunk0137_365_1	132.4654	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	26124753	26124915	-164089640	-	Tigger3b	DNA	TcMar-Tigger	-1035	196	2	2
chr4	26975705	26975706	chunk0137_389_1	37.27954	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	26970253	26976379	-163238176	-	L1PA6	LINE	L1	-6	6321	178	2
chr4	27011483	27011484	chunk0137_392_1	4.15945	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	27011154	27011770	-163202785	-	L1ME3Cz	LINE	L1	-258	739	80	2
chr4	27269236	27269237	chunk0137_401_1	32.2812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	27269212	27269268	-162945287	-	L2a	LINE	L2	0	3426	3373	2
chr4	27415110	27415111	chunk0137_406_1	35.38487	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	27414701	27415209	-162799346	-	MER110	LTR	ERV1	-11	457	1	2
chr4	27815930	27815931	chunk0137_407_1	6.48643	AR_DHT_Control	chr4	27815201	27816779	-162397776	+	L1MEc	LINE	L1	2836	4446	-2495	2
chr4	28128784	28128785	chunk0137_419_1	7.87427	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	28127470	28129136	-162085419	+	L1MC4a	LINE	L1	3807	5563	-601	2
chr4	28130084	28130085	chunk0137_420_1	7.62365	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	28129665	28130395	-162084160	+	L1PB	LINE	L1	4661	5401	-745	2
chr4	28181962	28181963	chunk0137_423_1	7.97539	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	28180939	28183992	-162030563	-	L1MA4	LINE	L1	-7	7712	4562	2
chr4	28402631	28402632	chunk0137_432_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	28402359	28403146	-161811409	-	LTR1A2	LTR	ERV1	0	837	34	2
chr4	28728855	28728856	chunk0137_438_1	47.1079	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	28726395	28729506	-161485049	-	L1PA16	LINE	L1	-1557	5292	2177	2
chr4	28773009	28773010	chunk0137_439_1	28.3769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	28772706	28773187	-161441368	+	Arthur1B	DNA	hAT-Tip100	106	639	-586	2
chr4	29119389	29119390	chunk0137_446_1	17.3852	AR_DHT_Control	chr4	29118621	29119637	-161094918	-	L1MC1	LINE	L1	-630	5703	4660	2
chr4	29230024	29230025	chunk0137_452_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	29229302	29235777	-160978778	+	L1PA7	LINE	L1	2	6458	-11	2
chr4	30078125	30078126	chunk0137_460_1	26.45188	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	30074005	30078511	-160136044	-	L1PA13	LINE	L1	0	6783	2255	2
chr4	30153265	30153266	chunk0137_462_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	30152901	30153873	-160060682	-	MER52C	LTR	ERV1	-2	1276	403	2
chr4	30237527	30237528	chunk0138_3_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	30237455	30237581	-159976974	+	L2a	LINE	L2	3298	3425	-1	2
chr4	30255289	30255290	chunk0138_4_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	30252730	30255729	-159958826	-	L1PB3	LINE	L1	-3016	3899	713	2
chr4	30283015	30283016	chunk0138_5_1	15.45677	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	30282978	30283022	-159931533	+	(GA)n	Simple_repeat	Simple_repeat	1	44	0	2
chr4	30286361	30286362	chunk0138_7_1	6.46639	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	30286289	30286400	-159928155	+	L2a	LINE	L2	3257	3375	0	2
chr4	30322174	30322175	chunk0138_9_1	6.88185	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	30322141	30322650	-159891905	-	L1ME2z	LINE	L1	-2	6442	5921	2
chr4	30361256	30361257	chunk0138_10_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	30357931	30361793	-159852762	-	L1PA15	LINE	L1	-2426	4247	403	2
chr4	30407240	30407241	chunk0138_14_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	30406223	30409523	-159805032	+	L1M2	LINE	L1	901	4331	-3231	2
chr4	30711215	30711216	chunk0138_19_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	30709939	30711872	-159502683	-	L1M2	LINE	L1	-4450	2759	29	2
chr4	30875225	30875226	chunk0138_24_1	12.811	AR_DHT_Control	chr4	30875054	30875448	-159339107	-	MLT1B	LTR	ERVL-MaLR	0	390	1	2
chr4	31223381	31223382	chunk0138_36_1	60.0053	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	31223251	31223445	-158991110	+	LTR86A2	LTR	ERVL	98	281	-227	2
chr4	31281915	31281916	chunk0138_40_1	30.1083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	31280891	31282751	-158931804	+	L1MA7	LINE	L1	4123	5920	-236	2
chr4	31517664	31517665	chunk0138_49_1	40.4111	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	31517640	31517785	-158696770	-	MIRc	SINE	MIR	-2	266	105	2
chr4	31536903	31536904	chunk0138_51_1	33.0062	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	31536430	31537709	-158676846	-	L1M2	LINE	L1	-2980	4582	3304	2
chr4	31682837	31682838	chunk0138_52_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	31682773	31683320	-158531235	-	MLT1E2	LTR	ERVL-MaLR	0	653	55	2
chr4	31748391	31748392	chunk0138_53_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	31747576	31748699	-158465856	-	MER52A	LTR	ERV1	0	1278	1	2
chr4	31938085	31938086	chunk0138_58_1	17.3683	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	31937703	31938650	-158275905	-	L1ME2	LINE	L1	-62	6290	5287	2
chr4	31982345	31982346	chunk0138_59_1	76.3571	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	31982339	31982915	-158231640	+	LTR82A	LTR	ERVL	79	705	-167	2
chr4	32131145	32131146	chunk0138_61_1	38.9506	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	32129764	32132479	-158082076	-	Tigger2	DNA	TcMar-Tigger	-1	2717	1	2
chr4	33300665	33300666	chunk0138_65_1	7.03383	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	33300478	33300680	-156913875	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr4	33332296	33332297	chunk0138_66_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	33331687	33334302	-156880253	+	L1PA15-16	LINE	L1	1	2426	-4427	2
chr4	33453767	33453768	chunk0138_68_1	11.1716	AR_DHT_Control	chr4	33453373	33455249	-156759306	+	L1PA15-16	LINE	L1	709	2421	-4432	2
chr4	34281000	34281001	chunk0138_72_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	34278481	34282362	-155932193	-	L1PBb	LINE	L1	-3710	3152	19	2
chr4	34921414	34921415	chunk0138_76_1	4.97473	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	34921336	34921415	-155293140	-	MER5A	DNA	hAT-Charlie	0	189	98	2
chr4	34922707	34922708	chunk0138_77_1	15.248	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	34922117	34922744	-155291811	+	Tigger17a	DNA	TcMar-Tigger	3	647	-7	2
chr4	35040095	35040096	chunk0138_78_1	9.34963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	35039734	35041327	-155173228	-	L1ME1	LINE	L1	-163	6016	4273	2
chr4	35253592	35253593	chunk0138_79_1	8.27376	AR_DHT_Control	chr4	35252786	35254223	-154960332	-	ERVL-B4-int	LTR	ERVL	-394	5320	3801	2
chr4	35456191	35456192	chunk0138_81_1	28.2968	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	35455414	35456800	-154757755	-	L1PA16	LINE	L1	-1	6165	4757	2
chr4	35458705	35458706	chunk0138_82_1	23.6617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	35457769	35462709	-154751846	-	L1M1	LINE	L1	-2507	5058	7	2
chr4	35520302	35520303	chunk0138_88_1	28.56405	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	35519961	35520389	-154694166	-	MER61C	LTR	ERV1	-2	426	1	2
chr4	35594012	35594013	chunk0138_90_1	15.7989	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	35593961	35594206	-154620349	-	MIR	SINE	MIR	-1	261	4	2
chr4	35712862	35712863	chunk0138_92_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	35712261	35714430	-154500125	+	L1MA4A	LINE	L1	719	3052	-4514	2
chr4	35762005	35762006	chunk0138_93_1	11.643	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	35761617	35762842	-154451713	+	L1P4b	LINE	L1	4168	5407	-1907	2
chr4	36001225	36001226	chunk0138_99_1	15.51483	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	36000965	36001826	-154212729	-	MER54A	LTR	ERVL	0	901	2	2
chr4	36099760	36099761	chunk0138_106_1	26.753	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	36099669	36099810	-154114745	+	MIR	SINE	MIR	6	163	-99	2
chr4	36196965	36196966	chunk0138_108_1	15.90698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36196792	36197083	-154017472	+	L2c	LINE	L2	2970	3287	-100	2
chr4	36197879	36197880	chunk0138_110_1	6.54035	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	36197483	36199196	-154015359	-	MER52A	LTR	ERV1	0	1755	1	2
chr4	36230625	36230626	chunk0138_113_1	22.31318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	36230601	36230682	-153983873	+	L1ME3A	LINE	L1	6058	6161	-12	2
chr4	36320374	36320375	chunk0138_117_1	20.48292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36320309	36320396	-153894159	+	L2b	LINE	L2	3302	3386	-1	2
chr4	36394887	36394888	chunk0138_121_1	10.0617	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36394602	36394910	-153819645	-	MLT1C	LTR	ERVL-MaLR	-1	466	153	2
chr4	36399783	36399784	chunk0138_122_1	6.41766	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36399765	36399877	-153814678	+	L2a	LINE	L2	3307	3416	-10	2
chr4	36427622	36427623	chunk0138_123_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	36426876	36428423	-153786132	+	L1PA14	LINE	L1	10	1286	-5403	2
chr4	36578904	36578905	chunk0138_127_1	8.3168	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36578890	36579988	-153634567	+	L1PB1	LINE	L1	5040	6138	-13	2
chr4	36580139	36580140	chunk0138_128_1	9.9328	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36580009	36580793	-153633762	+	L1MA9	LINE	L1	4466	5264	-2295	2
chr4	36676712	36676713	chunk0138_130_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36676708	36676930	-153537625	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr4	36722824	36722825	chunk0138_131_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	36722813	36722838	-153491717	+	(AT)n	Simple_repeat	Simple_repeat	1	25	0	2
chr4	36891173	36891174	chunk0138_138_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	36885609	36891683	-153322872	-	L1PA15	LINE	L1	-2	6783	501	2
chr4	36984515	36984516	chunk0138_143_1	29.90006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	36984371	36984975	-153229580	+	L1MB3	LINE	L1	5548	6159	-24	2
chr4	37008381	37008382	chunk0138_144_1	5.6425	AR_DHT_Control	chr4	37008122	37008467	-153206088	-	LTR18C	LTR	ERVL	0	345	1	2
chr4	37014609	37014610	chunk0138_145_1	6.23615	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	37013266	37014848	-153199707	+	L1ME1	LINE	L1	4579	6177	-2	2
chr4	37192090	37192091	chunk0138_147_1	6.86162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	37191960	37192140	-153022415	+	MER63A	DNA	hAT-Blackjack	31	208	-2	2
chr4	37250602	37250603	chunk0138_148_1	9.83377	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	37250377	37250604	-152963951	+	MIR	SINE	MIR	29	262	0	2
chr4	37297759	37297760	chunk0138_151_1	111.1206	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	37297428	37297935	-152916620	-	L1MC4	LINE	L1	-156	7886	7321	2
chr4	37873525	37873526	chunk0138_167_1	90.23549	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	37873323	37873592	-152340963	-	L1ME4b	LINE	L1	-3	889	615	2
chr4	37875681	37875682	chunk0138_169_1	21.3944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	37875676	37875747	-152338808	+	(TTTGT)n	Simple_repeat	Simple_repeat	1	75	0	2
chr4	37883044	37883045	chunk0138_171_1	93.4736	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	37882781	37883107	-152331448	-	Charlie18a	DNA	hAT-Charlie	-5	337	1	2
chr4	37951836	37951837	chunk0138_180_1	17.22378	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	37951409	37951881	-152262674	+	LTR107_Mam	LTR	LTR	5	524	-46	2
chr4	37988205	37988206	chunk0138_187_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	37988193	37988290	-152226265	+	MIR3	SINE	MIR	87	187	-21	2
chr4	38099303	38099304	chunk0138_196_1	36.9443	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	38099275	38099332	-152115223	+	L1ME3G	LINE	L1	568	630	-294	2
chr4	38841780	38841781	chunk0138_211_1	56.7957	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	38841546	38842093	-151372462	+	Ricksha_0	DNA	MULE-MuDR	1174	1726	-7	2
chr4	38867264	38867265	chunk0138_213_1	18.10058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	38867091	38867362	-151347193	-	L1ME4a	LINE	L1	-299	5825	5619	2
chr4	38872817	38872818	chunk0138_215_1	12.79194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	38872707	38872941	-151341614	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr4	38926137	38926138	chunk0138_218_1	15.82154	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	38926036	38926277	-151288278	-	MIRc	SINE	MIR	-20	248	2	2
chr4	38949184	38949185	chunk0138_220_1	19.69451	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	38949098	38949354	-151265201	-	MIRb	SINE	MIR	-1	261	12	2
chr4	39097395	39097396	chunk0138_224_1	16.74331	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	39096951	39097848	-151116707	+	L1MC4	LINE	L1	6816	7773	-269	2
chr4	39110246	39110247	chunk0138_226_1	20.76636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	39110044	39110466	-151104089	-	Charlie15b	DNA	hAT-Charlie	0	1061	598	2
chr4	39207853	39207854	chunk0138_228_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	39205925	39208303	-151006252	+	L1MEf	LINE	L1	15	2598	-4042	2
chr4	39300550	39300551	chunk0138_230_1	9.21264	AR_DHT_Control	chr4	39300430	39300811	-150913744	+	L1MC1	LINE	L1	5450	5850	-483	2
chr4	39529385	39529386	chunk0138_241_1	5.6425	AR_DHT_Control	chr4	39529134	39529408	-150685147	+	AluSx1	SINE	Alu	1	304	-8	2
chr4	39539491	39539492	chunk0138_242_1	11.9876	AR_DHT_Control	chr4	39539255	39539681	-150674874	-	LTR3B	LTR	ERVK	-6	431	1	2
chr4	39544156	39544157	chunk0138_245_1	55.2113	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	39543948	39544368	-150670187	-	LTR3B	LTR	ERVK	-6	431	1	2
chr4	39602606	39602607	chunk0138_249_1	9.21264	AR_DHT_Control	chr4	39602312	39602613	-150611942	+	AluSx1	SINE	Alu	1	302	-10	2
chr4	39854803	39854804	chunk0138_253_1	38.2139	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	39854589	39854815	-150359740	+	L2c	LINE	L2	3156	3383	-4	2
chr4	39858457	39858458	chunk0138_255_1	22.1661	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	39857969	39858627	-150355928	+	L1M4	LINE	L1	4899	5546	-1098	2
chr4	40114915	40114916	chunk0138_260_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	40114569	40115215	-150099340	-	L1MEd	LINE	L1	-2365	3781	2998	2
chr4	40174933	40174934	chunk0138_261_1	8.27376	AR_DHT_Control	chr4	40174814	40175017	-150039538	+	L1MA6	LINE	L1	5764	5922	-378	2
chr4	40190201	40190202	chunk0138_263_1	10.65027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	40190006	40190293	-150024262	+	L2a	LINE	L2	3134	3426	0	2
chr4	40256494	40256495	chunk0138_268_1	8.76676	AR_DHT_Control	chr4	40256401	40256549	-149958006	-	MIR3	SINE	MIR	-24	184	19	2
chr4	40331696	40331697	chunk0138_269_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	40331608	40331847	-149882708	+	Charlie7	DNA	hAT-Charlie	361	581	-2031	2
chr4	40454084	40454085	chunk0138_273_1	8.01864	AR_DHT_Control	chr4	40454034	40454229	-149760326	+	MER58A	DNA	hAT-Charlie	30	224	0	2
chr4	40975635	40975636	chunk0138_293_1	29.3422	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	40975582	40975654	-149238901	-	MIRb	SINE	MIR	-10	258	184	2
chr4	41077931	41077932	chunk0138_297_1	359.4436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	41077402	41078312	-149136243	+	HAL1	LINE	L1	1360	2398	-109	2
chr4	41178754	41178755	chunk0138_305_1	6.58498	AR_DHT_Control	chr4	41178646	41178848	-149035707	-	MIRc	SINE	MIR	-31	237	3	2
chr4	41319799	41319800	chunk0138_309_1	76.6036	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	41319709	41320008	-148894547	-	L2c	LINE	L2	-7	3380	3073	2
chr4	41475521	41475522	chunk0138_325_1	67.7525	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	41475399	41475587	-148738968	+	MER63A	DNA	hAT-Blackjack	1	192	-18	2
chr4	41533869	41533870	chunk0138_328_1	5.55081	AR_DHT_Control	chr4	41533612	41533886	-148680669	-	L2c	LINE	L2	-69	3318	3006	2
chr4	41601329	41601330	chunk0138_336_1	21.11077	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	41601113	41601577	-148612978	-	L2a	LINE	L2	0	3426	2950	2
chr4	41611350	41611351	chunk0138_339_1	9.34711	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	41611125	41611378	-148603177	+	Tigger3a	DNA	TcMar-Tigger	76	347	-1	2
chr4	41636868	41636869	chunk0138_340_1	26.3238	AR_DHT_Control	chr4	41636774	41636887	-148577668	+	L1ME3A	LINE	L1	5833	5957	-216	2
chr4	41852387	41852388	chunk0138_349_1	93.877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	41852171	41852456	-148362099	-	MER113A	DNA	hAT-Charlie	-3	311	15	2
chr4	42048463	42048464	chunk0138_354_1	42.3641	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	42048446	42048498	-148166057	+	MIRb	SINE	MIR	128	179	-89	2
chr4	42081411	42081412	chunk0138_355_1	7.36432	AR_DHT_Control	chr4	42080791	42081557	-148132998	-	Charlie1a	DNA	hAT-Charlie	-551	904	2	2
chr4	42131211	42131212	chunk0138_356_1	99.5825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	42130500	42131242	-148083313	+	L1PA10	LINE	L1	5441	6167	-1	2
chr4	42138971	42138972	chunk0138_360_1	8.96258	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	42138822	42138982	-148075573	+	Kanga1a	DNA	TcMar-Tc2	682	754	0	2
chr4	42217395	42217396	chunk0138_364_1	17.3029	AR_DHT_Control	chr4	42217247	42217503	-147997052	+	L1ME3A	LINE	L1	5799	6048	-125	2
chr4	42263251	42263252	chunk0138_366_1	16.67437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	42263099	42263431	-147951124	-	MER41C	LTR	ERV1	-214	307	1	2
chr4	42321010	42321011	chunk0138_369_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	42320966	42321060	-147893495	-	L1MD	LINE	L1	-2540	5455	5365	2
chr4	42467809	42467810	chunk0138_375_1	15.10687	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	42467740	42468000	-147746555	-	L1PB1	LINE	L1	-728	5423	5156	2
chr4	42703934	42703935	chunk0138_387_1	47.9181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	42703909	42704085	-147510470	+	MER91A	DNA	hAT-Tip100	1	183	-13	2
chr4	42718037	42718038	chunk0138_389_1	19.70381	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	42717996	42718083	-147496472	-	L2a	LINE	L2	0	3426	3336	2
chr4	42853109	42853110	chunk0138_396_1	22.05652	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	42852964	42853124	-147361431	+	L4_B_Mam	LINE	RTE-X	4808	4941	0	2
chr4	43799334	43799335	chunk0138_410_1	7.42302	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	43796600	43799452	-146415103	+	L1M1	LINE	L1	22	2981	-4665	2
chr4	43851272	43851273	chunk0138_411_1	8.27376	AR_DHT_Control	chr4	43851035	43851374	-146363181	+	LTR62	LTR	ERVL	1	328	-381	2
chr4	44104353	44104354	chunk0138_412_1	8.18895	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	44102525	44105333	-146109222	-	L1PA13	LINE	L1	-3867	2899	37	2
chr4	44588877	44588878	chunk0138_413_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	44587650	44588907	-145625648	+	L1PB4	LINE	L1	5651	6923	-2	2
chr4	45055101	45055102	chunk0138_417_1	19.7741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	45054142	45056378	-145158177	+	Arthur1	DNA	hAT-Tip100	939	3269	-678	2
chr4	45100089	45100090	chunk0138_423_1	47.3598	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	45099966	45100092	-145114463	-	Charlie5	DNA	hAT-Charlie	-2463	161	20	2
chr4	45131176	45131177	chunk0138_424_1	26.45164	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45131147	45131334	-145083221	-	L1MC5	LINE	L1	-1214	8090	7903	2
chr4	45149385	45149386	chunk0138_428_1	79.5378	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	45149339	45149802	-145064753	+	L3	LINE	CR1	2881	3356	-743	2
chr4	45175089	45175090	chunk0138_430_1	16.4902	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45174868	45175178	-145039377	-	Tigger10	DNA	TcMar-Tigger	-67	1777	1463	2
chr4	45294682	45294683	chunk0138_431_1	19.3375	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45294558	45294780	-144919775	-	MER58A	DNA	hAT-Charlie	0	224	2	2
chr4	45346610	45346611	chunk0138_432_1	12.9706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45346533	45346673	-144867882	-	MIRb	SINE	MIR	-98	170	31	2
chr4	45390783	45390784	chunk0138_433_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	45389388	45391398	-144823157	-	L1PA15	LINE	L1	-4301	2484	496	2
chr4	45643916	45643917	chunk0138_436_1	66.1536	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45643791	45643966	-144570589	-	L2a	LINE	L2	0	3426	3261	2
chr4	45729369	45729370	chunk0138_440_1	37.872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	45728996	45729628	-144484927	+	Tigger2b_Pri	DNA	TcMar-Tigger	1	658	-410	2
chr4	45758028	45758029	chunk0138_441_1	5.54137	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45757889	45758433	-144456122	-	MER34A1	LTR	ERV1	0	587	19	2
chr4	45869537	45869538	chunk0138_442_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	45869326	45869675	-144344880	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	2
chr4	46029027	46029028	chunk0138_444_1	17.90505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	46026920	46029642	-144184913	+	L1PB1	LINE	L1	2973	5792	-359	2
chr4	46648056	46648057	chunk0138_447_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	46647508	46651853	-143562702	+	L1PA15-16	LINE	L1	1412	5908	-1657	2
chr4	46695727	46695728	chunk0138_448_1	13.18592	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	46695246	46695784	-143518771	-	MER1A	DNA	hAT-Charlie	0	529	1	2
chr4	47064764	47064765	chunk0138_450_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	47064670	47064863	-143149692	+	L2a	LINE	L2	3246	3426	0	2
chr4	47462704	47462705	chunk0138_453_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	47462685	47462825	-142751730	+	MIR3	SINE	MIR	32	167	-41	2
chr4	47639351	47639352	chunk0138_457_1	23.93027	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	47639347	47639478	-142575077	+	L2b	LINE	L2	3211	3356	-19	2
chr4	47672239	47672240	chunk0138_458_1	9.55944	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	47672123	47672245	-142542310	+	L2a	LINE	L2	3291	3413	-13	2
chr4	47853370	47853371	chunk0139_7_1	7.72067	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	47853332	47853458	-142361097	-	MIRb	SINE	MIR	0	268	119	2
chr4	47870760	47870761	chunk0139_8_1	5.6425	AR_DHT_Control	chr4	47870676	47871072	-142343483	+	L1MC4	LINE	L1	6723	7179	-863	2
chr4	47886190	47886191	chunk0139_10_1	17.54322	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	47886034	47886363	-142328192	+	L1ME3	LINE	L1	5735	6124	-38	2
chr4	48001799	48001800	chunk0139_12_1	22.5664	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48001679	48002308	-142212247	+	L1MEf	LINE	L1	2630	3260	-2886	2
chr4	48287241	48287242	chunk0139_20_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48287034	48287718	-141926837	+	L1MD1	LINE	L1	3215	3864	-2673	2
chr4	48329461	48329462	chunk0139_23_1	149.4294	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	48329116	48329577	-141884978	-	LTR40a	LTR	ERVL	-24	495	5	2
chr4	48376066	48376067	chunk0139_27_1	10.186	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48375723	48376098	-141838457	+	L2c	LINE	L2	2911	3332	-55	2
chr4	48403816	48403817	chunk0139_29_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	48400700	48404237	-141810318	-	L1PA10	LINE	L1	-2880	3451	3	2
chr4	48405560	48405561	chunk0139_30_1	5.6425	AR_DHT_Control	chr4	48405363	48407712	-141806843	-	HAL1M8	LINE	L1	0	2991	562	2
chr4	48432278	48432279	chunk0139_34_1	7.74912	AR_DHT_Control	chr4	48432252	48432316	-141782239	+	L1ME4b	LINE	L1	280	349	-543	2
chr4	48480065	48480066	chunk0139_36_1	37.4017	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48480028	48480105	-141734450	+	MLT1K	LTR	ERVL-MaLR	251	331	-264	2
chr4	48592339	48592340	chunk0139_39_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48592115	48592451	-141622104	+	Charlie7	DNA	hAT-Charlie	87	466	-2146	2
chr4	48639261	48639262	chunk0139_44_1	48.2564	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48639165	48640806	-141573749	+	L1MC2	LINE	L1	4605	6336	-8	2
chr4	48660220	48660221	chunk0139_47_1	37.8425	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48660003	48660278	-141554277	+	L1MC3	LINE	L1	6757	7062	-723	2
chr4	48728101	48728102	chunk0139_51_1	24.0803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48727231	48728746	-141485809	+	L1MCa	LINE	L1	1	1554	-4954	2
chr4	48755031	48755032	chunk0139_53_1	72.0525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	48754949	48755662	-141458893	-	L3	LINE	CR1	-473	3626	2852	2
chr4	48796380	48796381	chunk0139_57_1	11.2084	AR_DHT_Control	chr4	48796340	48796453	-141418102	-	L2a	LINE	L2	-6	3420	3280	2
chr4	49091256	49091257	chunk0139_62_1	5.6425	AR_DHT_Control	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
chr4	49091967	49091968	chunk0139_63_1	27.04474	Merged_Lncap_AR_Veh;AR_DHT_Control	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
chr4	49092559	49092560	chunk0139_65_1	11.7522	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
chr4	49100293	49100294	chunk0139_66_1	29.85193	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
chr4	49107457	49107458	chunk0139_71_1	81.323	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
chr4	49108384	49108385	chunk0139_72_1	11.2832	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49091248	49112662	-141101893	+	(CATTC)n	Satellite	Satellite	1	21808	0	2
chr4	49118809	49118810	chunk0139_73_1	33.1285	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49110669	49156598	-141057957	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	46892	0	2
chr4	49121024	49121025	chunk0139_76_1	248.4567	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	49110669	49156598	-141057957	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	46892	0	2
chr4	49141107	49141108	chunk0139_79_1	59.0179	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr4	49110669	49156598	-141057957	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	46892	0	2
chr4	49150896	49150897	chunk0139_80_1	45.4957	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49110669	49156598	-141057957	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	46892	0	2
chr4	49314136	49314137	chunk0139_82_1	74.3021	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49313977	49314438	-140900117	-	MER21B	LTR	ERVL	-132	799	200	2
chr4	49490850	49490851	chunk0139_84_1	9.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	49490411	49491539	-140723016	+	L1MA5	LINE	L1	4805	5946	-354	2
chr4	49494997	49494998	chunk0139_86_1	18.6216	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	49494957	49495361	-140719194	+	MER61C	LTR	ERV1	11	428	0	2
chr4	49574140	49574141	chunk0139_90_1	6.74565	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49573983	49574223	-140640332	-	THE1D-int	LTR	ERVL-MaLR	-398	1233	955	2
chr4	49575678	49575679	chunk0139_91_1	7.9445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49574690	49575992	-140638563	+	MSTA-int	LTR	ERVL-MaLR	28	1369	-262	2
chr4	49576579	49576580	chunk0139_93_1	21.37767	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	49576349	49576662	-140637893	+	MSTA-int	LTR	ERVL-MaLR	1317	1651	0	2
chr4	49657589	49657590	chunk0139_98_1	109.944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49631297	49658068	-140556487	+	(GAATG)n	Satellite	Satellite	1	27343	0	2
chr4	49709778	49709779	chunk0139_99_1	217.0417	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	49709068	49711961	-140502594	-	SAR	Satellite	Satellite	-9	2924	1	2
chr4	51107425	51107426	chunk0139_102_1	204.1469	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	51107158	51107565	-139106990	-	SAR	Satellite	Satellite	-4	407	1	2
chr4	52498683	52498684	chunk0139_113_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	52498345	52498729	-137715826	-	Charlie1a	DNA	hAT-Charlie	-953	502	108	2
chr4	52604418	52604419	chunk0139_115_1	5.00158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	52604321	52604481	-137610074	-	MIRb	SINE	MIR	-93	175	4	2
chr4	52711339	52711340	chunk0139_117_1	11.6192	AR_DHT_Control	chr4	52711296	52711440	-137503115	+	L2b	LINE	L2	2935	3081	-294	2
chr4	53149369	53149370	chunk0139_125_1	44.8631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	53149033	53150178	-137064377	+	L1MC3	LINE	L1	6568	7775	-10	2
chr4	53275041	53275042	chunk0139_131_1	5.73904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	53275027	53275111	-136939444	-	MIRc	SINE	MIR	-9	259	169	2
chr4	53448872	53448873	chunk0139_132_1	79.0882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	53448708	53450538	-136764017	-	L1MEd	LINE	L1	-1553	5453	3466	2
chr4	53454350	53454351	chunk0139_134_1	10.5205	AR_DHT_Control	chr4	53454136	53454438	-136760117	+	Tigger3a	DNA	TcMar-Tigger	25	348	0	2
chr4	53734571	53734572	chunk0139_157_1	63.3571	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	53734485	53735476	-136479079	+	HAL1b	LINE	L1	1204	2211	-210	2
chr4	53776409	53776410	chunk0139_161_1	28.6011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	53776272	53776483	-136438072	-	L1MA10	LINE	L1	0	6334	5986	2
chr4	53799126	53799127	chunk0139_163_1	88.0615	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	53799035	53799140	-136415415	-	L2a	LINE	L2	-6	3420	3318	2
chr4	53834142	53834143	chunk0139_168_1	42.7006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	53833351	53839500	-136375055	+	L1PA6	LINE	L1	1	6147	-7	2
chr4	53942165	53942166	chunk0139_170_1	9.21264	AR_DHT_Control	chr4	53941447	53942225	-136272330	+	L1PREC2	LINE	L1	5365	6155	-5	2
chr4	54144897	54144898	chunk0139_177_1	36.56642	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	54144748	54144909	-136069646	+	MIRc	SINE	MIR	59	251	-17	2
chr4	54306043	54306044	chunk0139_185_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	54302101	54306271	-135908284	+	L1PB1	LINE	L1	2081	6302	-565	2
chr4	54346621	54346622	chunk0139_186_1	23.01668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	54343827	54347618	-135866937	+	L1PB1	LINE	L1	3061	6867	0	2
chr4	54348688	54348689	chunk0139_188_1	22.965	AR_DHT_Control	chr4	54348313	54348730	-135865825	-	L2a	LINE	L2	-30	3396	3016	2
chr4	54772468	54772469	chunk0139_196_1	22.6927	AR_DHT_Control	chr4	54771855	54772817	-135441738	+	L2a	LINE	L2	2351	3426	0	2
chr4	54774765	54774766	chunk0139_198_1	21.22741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	54774668	54774811	-135439744	+	L2c	LINE	L2	3132	3282	-105	2
chr4	54809139	54809140	chunk0139_200_1	45.9959	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	54807074	54813217	-135401338	+	L1PA6	LINE	L1	174	6317	-10	2
chr4	54967277	54967278	chunk0139_211_1	4.83532	AR_DHT_Control	chr4	54966995	54967299	-135247256	+	L4_C_Mam	LINE	RTE-X	2024	2344	-2794	2
chr4	54989923	54989924	chunk0139_212_1	40.3285	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	54988135	54993228	-135221327	+	L1MA4A	LINE	L1	2472	7715	-4	2
chr4	55025694	55025695	chunk0139_215_1	60.9812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	55025371	55025953	-135188602	+	LTR10C	LTR	ERV1	11	591	0	2
chr4	55273460	55273461	chunk0139_227_1	14.2024	AR_DHT_Control	chr4	55273417	55273512	-134941043	-	MamTip2	DNA	hAT-Tip100	-44	261	170	2
chr4	55278525	55278526	chunk0139_228_1	40.69041	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	55277967	55278573	-134935982	-	LTR43	LTR	ERV1	-1	601	1	2
chr4	55330767	55330768	chunk0139_229_1	18.8118	AR_DHT_Control	chr4	55330287	55330872	-134883683	+	LTR26	LTR	ERV1	1	603	0	2
chr4	55339856	55339857	chunk0139_231_1	7.3092	AR_DHT_Control	chr4	55339783	55339952	-134874603	+	HERVIP10B3-int	LTR	ERV1	479	703	-6900	2
chr4	55357333	55357334	chunk0139_233_1	29.27646	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	55356806	55357336	-134857219	+	L2a	LINE	L2	2789	3425	-1	2
chr4	55379189	55379190	chunk0139_234_1	16.33034	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	55378917	55379366	-134835189	-	LTR3B_	LTR	ERVK	-46	453	1	2
chr4	55920687	55920688	chunk0139_244_1	38.794	AR_DHT_Control	chr4	55920685	55920741	-134293814	-	MIRb	SINE	MIR	-30	238	176	2
chr4	56260513	56260514	chunk0139_251_1	20.01236	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	56260484	56260843	-133953712	+	MLT2C1	LTR	ERVL	1	342	-55	2
chr4	56572213	56572214	chunk0139_261_1	64.9928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	56571851	56572410	-133642145	-	Tigger3b	DNA	TcMar-Tigger	-698	533	2	2
chr4	56743858	56743859	chunk0139_274_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	56743461	56743988	-133470567	-	LTR40a	LTR	ERVL	0	519	1	2
chr4	56941136	56941137	chunk0139_276_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	56940954	56941226	-133273329	-	L1MC4	LINE	L1	-405	7637	7321	2
chr4	57008619	57008620	chunk0139_278_1	24.73164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	57008504	57009169	-133205386	-	L2c	LINE	L2	-9	3378	2600	2
chr4	57029024	57029025	chunk0139_279_1	7.12934	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	57028767	57029065	-133185490	-	L1MC5	LINE	L1	-284	9020	8758	2
chr4	57101086	57101087	chunk0139_281_1	9.76623	AR_DHT_Control	chr4	57101060	57101164	-133113391	-	MIRc	SINE	MIR	-5	263	170	2
chr4	57125343	57125344	chunk0139_283_1	6.49378	AR_DHT_Control	chr4	57125208	57125429	-133089126	-	MER58A	DNA	hAT-Charlie	-1	223	2	2
chr4	57130328	57130329	chunk0139_284_1	6.80366	AR_DHT_Control	chr4	57130145	57130508	-133084047	-	L1MC1	LINE	L1	-120	6213	5850	2
chr4	57321099	57321100	chunk0139_289_1	13.3531	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	57321053	57321166	-132893389	-	MamRep1894	DNA	hAT	0	123	2	2
chr4	57430691	57430692	chunk0139_291_1	11.4219	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	57430674	57430847	-132783708	-	MIR	SINE	MIR	-32	230	44	2
chr4	57444573	57444574	chunk0139_292_1	7.3092	AR_DHT_Control	chr4	57444469	57444622	-132769933	-	L2c	LINE	L2	-4	3383	3211	2
chr4	57487416	57487417	chunk0139_296_1	67.9554	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	57486965	57487473	-132727082	+	L2a	LINE	L2	2881	3418	-8	2
chr4	57607041	57607042	chunk0139_301_1	20.50859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	57606892	57607235	-132607320	+	L2c	LINE	L2	3030	3386	-1	2
chr4	57633629	57633630	chunk0139_303_1	25.1618	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	57633624	57633838	-132580717	-	MER58A	DNA	hAT-Charlie	0	224	19	2
chr4	58147219	58147220	chunk0139_316_1	21.57883	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	58146236	58148705	-132065850	+	L1M4	LINE	L1	2683	5191	-955	2
chr4	58260575	58260576	chunk0139_318_1	16.16174	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	58260451	58261216	-131953339	+	L1MC1	LINE	L1	5584	6333	0	2
chr4	58303637	58303638	chunk0139_321_1	15.56658	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	58303603	58304228	-131910327	+	MER41B	LTR	ERV1	1	634	0	2
chr4	58359780	58359781	chunk0139_325_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	58359543	58361073	-131853482	-	MER52A	LTR	ERV1	-29	1726	1	2
chr4	58665691	58665692	chunk0139_328_1	28.29356	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	58665352	58665954	-131548601	+	Charlie1a	DNA	hAT-Charlie	59	670	-785	2
chr4	58811520	58811521	chunk0139_330_1	40.6719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	58811469	58811617	-131402938	+	L1MA3	LINE	L1	6157	6304	-1	2
chr4	59298919	59298920	chunk0139_334_1	28.8762	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	59298610	59299045	-130915510	+	L1MB7	LINE	L1	5	421	-6446	2
chr4	59321454	59321455	chunk0139_335_1	29.2667	AR_DHT_Control	chr4	59321369	59321602	-130892953	-	LTR86A2	LTR	ERVL	-69	439	201	2
chr4	59881869	59881870	chunk0139_347_1	25.9343	AR_DHT_Control	chr4	59881581	59882030	-130332525	-	LTR22A	LTR	ERVK	0	458	1	2
chr4	60103963	60103964	chunk0139_352_1	41.9077	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	60103744	60104091	-130110464	+	L1MC5a	LINE	L1	1828	2198	-579	2
chr4	60140878	60140879	chunk0139_354_1	8.58634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	60140719	60140885	-130073670	-	LTR108a_Mam	LTR	ERVL	-306	191	26	2
chr4	60223070	60223071	chunk0139_355_1	16.888	AR_DHT_Control	chr4	60222689	60223191	-129991364	-	MLT1H	LTR	ERVL-MaLR	0	549	1	2
chr4	60233582	60233583	chunk0139_356_1	12.7341	AR_DHT_Control	chr4	60231649	60234850	-129979705	-	L1PA15-16	LINE	L1	-3526	3323	5	2
chr4	60286949	60286950	chunk0139_358_1	109.4385	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	60286940	60288101	-129926454	-	L1P3	LINE	L1	-1562	4584	3434	2
chr4	60290410	60290411	chunk0139_359_1	9.93796	AR_DHT_Control	chr4	60290146	60290501	-129924054	-	MLT1G	LTR	ERVL-MaLR	0	591	235	2
chr4	60319383	60319384	chunk0139_362_1	83.7687	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	60318528	60319671	-129894884	-	Tigger3b	DNA	TcMar-Tigger	-16	1215	3	2
chr4	60662647	60662648	chunk0139_370_1	28.62073	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	60662084	60662706	-129551849	-	LTR1E	LTR	ERV1	0	804	167	2
chr4	60872671	60872672	chunk0139_375_1	160.91369	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr4	60872364	60872680	-129341875	+	LTR16E2	LTR	ERVL	157	489	-79	2
chr4	61429314	61429315	chunk0139_382_1	22.56732	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	61429244	61429326	-128785229	-	MIRb	SINE	MIR	-180	88	7	2
chr4	61510084	61510085	chunk0139_384_1	13.2699	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	61509426	61511085	-128703470	-	L1PA16	LINE	L1	-206	5960	4332	2
chr4	61638474	61638475	chunk0139_385_1	8.8907	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	61637771	61638514	-128576041	+	L1ME2z	LINE	L1	6363	6962	-277	2
chr4	61922047	61922048	chunk0139_389_1	67.1037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	61921930	61922094	-128292461	+	L1MC4a	LINE	L1	5709	5887	-1995	2
chr4	62138648	62138649	chunk0139_390_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	62138406	62139221	-128075334	-	LTR28C	LTR	ERV1	-248	881	1	2
chr4	62419593	62419594	chunk0139_393_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	62418497	62424151	-127790404	-	HERVL-int	LTR	ERVL	0	5654	1	2
chr4	62484463	62484464	chunk0139_394_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	62484230	62484760	-127729795	-	MLT1G1	LTR	ERVL-MaLR	0	579	1	2
chr4	62891184	62891185	chunk0139_399_1	21.2346	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	62890834	62891685	-127322870	-	L1MC1	LINE	L1	-314	6030	5126	2
chr4	63280289	63280290	chunk0139_401_1	19.87834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	63274715	63281297	-126933258	+	L1PA15	LINE	L1	1	6772	-13	2
chr4	63302887	63302888	chunk0139_404_1	25.2388	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	63302747	63303598	-126910957	+	MER6	DNA	TcMar-Tigger	1	865	0	2
chr4	63325303	63325304	chunk0139_406_1	51.1112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	63325149	63326491	-126888064	+	L1M2	LINE	L1	2776	4083	-2060	2
chr4	63396507	63396508	chunk0139_407_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	63395643	63396592	-126817963	+	LTR27E	LTR	ERV1	1	1755	0	2
chr4	63814524	63814525	chunk0139_415_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	63808874	63816298	-126398257	-	L1PA13	LINE	L1	-3	6780	2	2
chr4	63955070	63955071	chunk0139_416_1	8.41215	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	63955046	63955290	-126259265	-	L1MEf	LINE	L1	-4023	2219	1988	2
chr4	64122430	64122431	chunk0139_421_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	64120894	64123409	-126091146	-	L1PA13	LINE	L1	-4196	2589	10	2
chr4	64145035	64145036	chunk0139_423_1	20.34022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	64142260	64146353	-126068202	-	HERVK11-int	LTR	ERVK	0	7953	3850	2
chr4	64504531	64504532	chunk0139_432_1	29.1596	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	64504099	64506693	-125707862	+	L1MC1	LINE	L1	622	3221	-3100	2
chr4	64581595	64581596	chunk0139_435_1	35.21	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	64581417	64582049	-125632506	+	L2a	LINE	L2	2799	3426	0	2
chr4	64605602	64605603	chunk0139_437_1	25.6042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	64605315	64605977	-125608578	+	L1P4	LINE	L1	4540	5202	-944	2
chr4	64623523	64623524	chunk0139_438_1	13.76651	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	64623480	64623740	-125590815	-	HERVK22-int	LTR	ERVK	0	6837	6657	2
chr4	65191014	65191015	chunk0140_1_1	7.36432	AR_DHT_Control	chr4	65190884	65191171	-125023384	-	Tigger3b	DNA	TcMar-Tigger	0	1231	929	2
chr4	65242044	65242045	chunk0140_3_1	15.0063	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	65241173	65242746	-124971809	-	MER52A	LTR	ERV1	-9	1746	1	2
chr4	65378583	65378584	chunk0140_10_1	39.16207	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	65378520	65378725	-124835830	+	MER58A	DNA	hAT-Charlie	2	224	0	2
chr4	65430529	65430530	chunk0140_13_1	7.36432	AR_DHT_Control	chr4	65430512	65430735	-124783820	-	MIR	SINE	MIR	-1	261	5	2
chr4	65470857	65470858	chunk0140_14_1	11.1716	AR_DHT_Control	chr4	65470795	65471208	-124743347	+	MER57A1	LTR	ERV1	1	432	0	2
chr4	65502444	65502445	chunk0140_15_1	9.99437	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	65501229	65503284	-124711271	+	L1PA16	LINE	L1	4106	6157	-9	2
chr4	65541951	65541952	chunk0140_16_1	17.9161	AR_DHT_Control	chr4	65541100	65544943	-124669612	+	L1PA8A	LINE	L1	2001	5862	-269	2
chr4	65826714	65826715	chunk0140_28_1	17.1871	AR_DHT_Control	chr4	65826211	65826764	-124387791	-	Tigger6a	DNA	TcMar-Tigger	-511	572	1	2
chr4	66115525	66115526	chunk0140_33_1	8.27376	AR_DHT_Control	chr4	66115268	66115957	-124098598	+	L1PA8	LINE	L1	5476	6161	-11	2
chr4	66226771	66226772	chunk0140_34_1	9.21264	AR_DHT_Control	chr4	66226203	66226978	-123987577	+	L1ME3	LINE	L1	5296	6133	-29	2
chr4	66273508	66273509	chunk0140_35_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	66273103	66273541	-123941014	-	MER129	LTR?	LTR?	0	469	1	2
chr4	66356992	66356993	chunk0140_36_1	12.1937	AR_DHT_Control	chr4	66356846	66357154	-123857401	-	L1PA16	LINE	L1	-3	6163	5815	2
chr4	66357716	66357717	chunk0140_37_1	24.11707	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	66357181	66357983	-123856572	-	L1PA16	LINE	L1	-352	5814	5025	2
chr4	66543438	66543439	chunk0140_39_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	66542927	66544464	-123670091	+	L1M1	LINE	L1	16	1711	-5854	2
chr4	66597082	66597083	chunk0140_41_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	66596627	66598937	-123615618	+	L1MA5	LINE	L1	3	3007	-4202	2
chr4	66626735	66626736	chunk0140_45_1	55.1631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	66626454	66626756	-123587799	+	ERVL-B4-int	LTR	ERVL	5338	5653	-1	2
chr4	66648979	66648980	chunk0140_50_1	93.7896	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	66648900	66649112	-123565443	+	MIR	SINE	MIR	2	235	-27	2
chr4	66664095	66664096	chunk0140_54_1	18.5996	AR_DHT_Control	chr4	66663965	66664318	-123550237	-	MLT1A1	LTR	ERVL-MaLR	-2	406	1	2
chr4	66676393	66676394	chunk0140_56_1	31.49988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	66676347	66677095	-123537460	+	L1M5	LINE	L1	4380	5179	-967	2
chr4	66907452	66907453	chunk0140_58_1	8.21385	AR_DHT_Control	chr4	66906951	66909945	-123304610	-	L1ME1	LINE	L1	-22	6330	3326	2
chr4	67035625	67035626	chunk0140_59_1	22.01041	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	67035493	67036217	-123178338	-	MER54A	LTR	ERVL	0	901	151	2
chr4	67043692	67043693	chunk0140_60_1	24.68155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	67043409	67044448	-123170107	-	ERV3-16A3_I-int	LTR	ERVL	-157	5069	4055	2
chr4	67147735	67147736	chunk0140_66_1	21.0751	AR_DHT_Control	chr4	67147570	67147832	-123066723	-	L2a	LINE	L2	-1	3425	3148	2
chr4	67360657	67360658	chunk0140_67_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	67360338	67361030	-122853525	-	L1M4b	LINE	L1	-3718	3149	2492	2
chr4	67403365	67403366	chunk0140_68_1	18.32292	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	67403095	67403532	-122811023	-	MER70B	LTR	ERVL	-135	443	2	2
chr4	67454188	67454189	chunk0140_70_1	7.36432	AR_DHT_Control	chr4	67454036	67454409	-122760146	-	Tigger3b	DNA	TcMar-Tigger	-833	398	1	2
chr4	67465155	67465156	chunk0140_71_1	5.28628	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	67465010	67466073	-122748482	+	L1PBa	LINE	L1	660	1644	-5219	2
chr4	67481852	67481853	chunk0140_72_1	6.23615	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	67480349	67482848	-122731707	+	L1PB1	LINE	L1	4239	6811	-56	2
chr4	67542146	67542147	chunk0140_73_1	5.6425	AR_DHT_Control	chr4	67542142	67542357	-122672198	-	MER58A	DNA	hAT-Charlie	-3	221	1	2
chr4	68303801	68303802	chunk0140_92_1	19.57221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	68303733	68303825	-121910730	+	MIR	SINE	MIR	146	236	-26	2
chr4	68346727	68346728	chunk0140_96_1	5.55081	AR_DHT_Control	chr4	68346408	68346948	-121867607	+	MER44B	DNA	TcMar-Tigger	1	539	-11	2
chr4	68387360	68387361	chunk0140_99_1	121.4208	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	68387287	68387404	-121827151	+	MIR	SINE	MIR	82	209	-53	2
chr4	68407909	68407910	chunk0140_101_1	15.54852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	68407603	68408597	-121805958	+	MER4-int	LTR	ERV1	1485	2473	-4125	2
chr4	68716851	68716852	chunk0140_115_1	16.2489	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	68716092	68717028	-121497527	-	L1MC4a	LINE	L1	-254	7628	6665	2
chr4	68740672	68740673	chunk0140_116_1	6.54035	AR_DHT_Control	chr4	68740434	68740817	-121473738	-	L1M4	LINE	L1	-1697	4449	4059	2
chr4	68855145	68855146	chunk0140_119_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	68855122	68855522	-121359033	+	MER57B1	LTR	ERV1	1	399	-2	2
chr4	68865271	68865272	chunk0140_120_1	11.4948	AR_DHT_Control	chr4	68865055	68865648	-121348907	+	LTR10C	LTR	ERV1	1	589	-2	2
chr4	68924996	68924997	chunk0140_121_1	9.21264	AR_DHT_Control	chr4	68924963	68925155	-121289400	+	MER30	DNA	hAT-Charlie	31	229	-1	2
chr4	68935406	68935407	chunk0140_122_1	11.1716	AR_DHT_Control	chr4	68935330	68940692	-121273863	+	L1PA6	LINE	L1	770	6138	-16	2
chr4	69095555	69095556	chunk0140_129_1	8.27376	AR_DHT_Control	chr4	69095090	69095734	-121118821	-	LTR26	LTR	ERV1	0	603	1	2
chr4	69106248	69106249	chunk0140_130_1	6.48643	AR_DHT_Control	chr4	69106102	69106913	-121107642	-	L1PA13	LINE	L1	-1	6162	5343	2
chr4	69178389	69178390	chunk0140_132_1	33.3448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	69178317	69178582	-121035973	-	LTR10C	LTR	ERV1	-326	265	1	2
chr4	69194401	69194402	chunk0140_134_1	16.52692	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69192348	69195436	-121019119	+	HERVK11-int	LTR	ERVK	6	3066	-4887	2
chr4	69219437	69219438	chunk0140_140_1	8.52761	AR_DHT_Control	chr4	69219206	69219471	-120995084	-	L1MB8	LINE	L1	-913	5399	5128	2
chr4	69239323	69239324	chunk0140_142_1	86.5148	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69239209	69239473	-120975082	-	LTR10C	LTR	ERV1	-326	265	1	2
chr4	69310486	69310487	chunk0140_146_1	39.2253	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	69310271	69310536	-120904019	+	LTR10C	LTR	ERV1	1	265	-326	2
chr4	69321497	69321498	chunk0140_147_1	138.6871	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	69321327	69321644	-120892911	+	LTR2752	LTR	ERV1	931	1263	0	2
chr4	69343357	69343358	chunk0140_150_1	77.9732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69343251	69343516	-120871039	-	LTR10C	LTR	ERV1	-326	265	1	2
chr4	69435239	69435240	chunk0140_159_1	8.10772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69434520	69435624	-120778931	+	L1M4b	LINE	L1	1468	2597	-4270	2
chr4	69521414	69521415	chunk0140_160_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	69520292	69521778	-120692777	+	MER52A	LTR	ERV1	1	1755	0	2
chr4	69561158	69561159	chunk0140_161_1	7.97574	AR_DHT_Control	chr4	69560303	69562753	-120651802	+	L1M1	LINE	L1	2395	4875	-2690	2
chr4	69570587	69570588	chunk0140_163_1	39.0732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69569939	69570848	-120643707	+	Zaphod3	DNA	hAT-Tip100	1945	2568	-55	2
chr4	69601378	69601379	chunk0140_164_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	69600999	69601919	-120612636	+	L1PBa	LINE	L1	654	1577	-5286	2
chr4	69683267	69683268	chunk0140_165_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69681875	69683278	-120531277	+	L1MEc	LINE	L1	1236	2785	-3534	2
chr4	69735746	69735747	chunk0140_173_1	34.4929	AR_DHT_Control	chr4	69735702	69735799	-120478756	+	L1MDa	LINE	L1	1150	1248	-5292	2
chr4	69756266	69756267	chunk0140_175_1	40.436	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	69755610	69756304	-120458251	-	L1MEc	LINE	L1	-4851	1549	812	2
chr4	69823615	69823616	chunk0140_177_1	25.3219	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69823295	69824561	-120389994	-	HERV3-int	LTR	ERV1	-3459	4967	3702	2
chr4	69830770	69830771	chunk0140_180_1	27.99086	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69828660	69832374	-120382181	-	HERV3-int	LTR	ERV1	-4722	3704	1	2
chr4	69836555	69836556	chunk0140_183_1	16.36705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	69836529	69836623	-120377932	+	L3	LINE	CR1	76	170	-3929	2
chr4	69868825	69868826	chunk0140_185_1	93.2181	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	69868584	69869545	-120345010	+	MER4-int	LTR	ERV1	1498	2477	-4121	2
chr4	69920878	69920879	chunk0140_187_1	9.21264	AR_DHT_Control	chr4	69920530	69921238	-120293317	-	L1MA5A	LINE	L1	-12	6285	5583	2
chr4	69984246	69984247	chunk0140_189_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	69984227	69984275	-120230280	+	(GCT)n	Simple_repeat	Simple_repeat	1	50	0	2
chr4	70056837	70056838	chunk0140_190_1	80.4354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	70056245	70057518	-120157037	+	L1PA8A	LINE	L1	4848	6131	0	2
chr4	70218278	70218279	chunk0140_194_1	11.1716	AR_DHT_Control	chr4	70218140	70218673	-119995882	+	L2c	LINE	L2	2793	3426	0	2
chr4	70294856	70294857	chunk0140_197_1	5.50529	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	70293619	70295179	-119919376	-	L1M3b	LINE	L1	-4174	3392	1998	2
chr4	70387064	70387065	chunk0140_199_1	4.51289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	70386999	70387135	-119827420	-	L2	LINE	L2	-1413	2006	1863	2
chr4	70453284	70453285	chunk0140_202_1	13.4307	AR_DHT_Control	chr4	70453080	70454747	-119759808	-	L1M1	LINE	L1	-5900	1665	15	2
chr4	70566429	70566430	chunk0140_207_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	70565469	70568695	-119645860	-	L1PA14	LINE	L1	-7	8149	4870	2
chr4	70805135	70805136	chunk0140_215_1	4.49683	AR_DHT_Control	chr4	70805097	70805232	-119409323	-	MIR	SINE	MIR	-119	149	6	2
chr4	70993099	70993100	chunk0140_223_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	70992983	70993102	-119221453	+	MIR	SINE	MIR	34	160	-102	2
chr4	71063953	71063954	chunk0140_225_1	88.6608	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	71063932	71063968	-119150587	-	MIRc	SINE	MIR	-18	250	215	2
chr4	71151184	71151185	chunk0140_229_1	134.6294	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	71151004	71151193	-119063362	-	MER3	DNA	hAT-Charlie	0	209	1	2
chr4	71233996	71233997	chunk0140_235_1	10.1214	AR_DHT_Control	chr4	71233798	71234358	-118980197	+	L2a	LINE	L2	2755	3426	0	2
chr4	71586479	71586480	chunk0140_262_1	31.4584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	71585469	71586640	-118627915	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	2
chr4	71797189	71797190	chunk0140_264_1	10.1791	AR_DHT_Control	chr4	71791666	71797803	-118416752	-	L1PA6	LINE	L1	0	6327	179	2
chr4	71826481	71826482	chunk0140_265_1	15.8739	AR_DHT_Control	chr4	71825451	71826539	-118388016	+	L2b	LINE	L2	2172	3364	-11	2
chr4	71850089	71850090	chunk0140_266_1	49.8061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	71849812	71850193	-118364362	-	L1MA9	LINE	L1	-148	6164	5788	2
chr4	71884812	71884813	chunk0140_267_1	11.1716	AR_DHT_Control	chr4	71884679	71884960	-118329595	+	L2b	LINE	L2	3081	3368	-19	2
chr4	72003334	72003335	chunk0140_268_1	12.5433	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	72002926	72005049	-118209506	+	MER101-int	LTR	ERV1	2753	4600	-2039	2
chr4	72083533	72083534	chunk0140_271_1	87.50623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	72083479	72084207	-118130348	+	L2	LINE	L2	2069	2851	-568	2
chr4	72145315	72145316	chunk0140_273_1	7.97574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	72145167	72145359	-118069196	+	(AT)n	Simple_repeat	Simple_repeat	1	194	0	2
chr4	72170311	72170312	chunk0140_274_1	35.249	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	72169930	72170522	-118044033	-	L1PA17	LINE	L1	-2358	3788	3204	2
chr4	72327462	72327463	chunk0140_284_1	86.7391	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	72327417	72327681	-117886874	-	MIR	SINE	MIR	-20	242	5	2
chr4	72338099	72338100	chunk0140_287_1	17.54522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	72338088	72338234	-117876321	-	MIR	SINE	MIR	-31	237	74	2
chr4	72502585	72502586	chunk0140_291_1	17.8225	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	72500000	72502721	-117711834	-	L1PA15-16	LINE	L1	-386	6483	3730	2
chr4	72818535	72818536	chunk0140_293_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	72818517	72818715	-117395840	-	L2c	LINE	L2	-5	3382	3186	2
chr4	72959709	72959710	chunk0140_301_1	9.21264	AR_DHT_Control	chr4	72959355	72963279	-117251276	+	L1PA15-16	LINE	L1	1465	4991	-1858	2
chr4	73035213	73035214	chunk0140_305_1	36.5904	AR_DHT_Control	chr4	73035098	73035341	-117179214	-	Tigger3c	DNA	TcMar-Tigger	0	602	361	2
chr4	73048031	73048032	chunk0140_307_1	176.821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	73047938	73048384	-117166171	+	LTR47B3	LTR	ERVL	1	462	-2	2
chr4	73068377	73068378	chunk0140_309_1	7.47918	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73068322	73068434	-117146121	+	MIRb	SINE	MIR	85	204	-64	2
chr4	73087998	73087999	chunk0140_310_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73087964	73088016	-117126539	+	GA-rich	Low_complexity	Low_complexity	1	53	0	2
chr4	73264721	73264722	chunk0140_313_1	68.4859	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73264647	73264801	-116949754	-	L1ME4a	LINE	L1	-2	6122	5960	2
chr4	73463135	73463136	chunk0140_321_1	40.52291	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73462623	73463228	-116751327	+	L1MA7	LINE	L1	1873	2460	-5036	2
chr4	73631923	73631924	chunk0140_324_1	9.21264	AR_DHT_Control	chr4	73630905	73636543	-116578012	+	L1PB3	LINE	L1	56	4936	-1979	2
chr4	73692414	73692415	chunk0140_330_1	40.3388	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	73692315	73692438	-116522117	+	L2c	LINE	L2	3264	3382	-5	2
chr4	73839925	73839926	chunk0140_338_1	90.5926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73839642	73839970	-116374585	+	L2c	LINE	L2	3079	3357	-18	2
chr4	73947490	73947491	chunk0140_347_1	75.22071	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	73947381	73947504	-116267051	+	L2c	LINE	L2	3259	3387	0	2
chr4	74100593	74100594	chunk0140_350_1	24.2773	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	74100543	74100765	-116113790	+	MIR	SINE	MIR	11	257	-5	2
chr4	74156597	74156598	chunk0140_357_1	24.49069	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	74156085	74157138	-116057417	-	L1MC3	LINE	L1	-1628	6157	5040	2
chr4	74167034	74167035	chunk0140_360_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	74166638	74167464	-116047091	+	L1M3e	LINE	L1	1128	2033	-4997	2
chr4	74253784	74253785	chunk0140_361_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	74253305	74254054	-115960501	+	L1M3e	LINE	L1	460	1235	-6254	2
chr4	74322680	74322681	chunk0140_362_1	14.2024	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	74322144	74322733	-115891822	-	Tigger9b	DNA	TcMar-Tigger	0	624	1	2
chr4	74397977	74397978	chunk0140_364_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	74397906	74398071	-115816484	+	MIR	SINE	MIR	88	262	0	2
chr4	74902889	74902890	chunk0140_380_1	33.03024	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	74902484	74903055	-115311500	-	MER89-int	LTR	ERV1	-6182	619	35	2
chr4	74990212	74990213	chunk0140_389_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	74990074	74990303	-115224252	-	L2	LINE	L2	-829	2590	2357	2
chr4	75159165	75159166	chunk0140_390_1	88.7196	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	75159136	75159240	-115055315	-	MIR3	SINE	MIR	-65	143	28	2
chr4	75408637	75408638	chunk0140_397_1	23.9851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	75408354	75411049	-114803506	-	L1MA5A	LINE	L1	-19	6920	4132	2
chr4	75485095	75485096	chunk0140_399_1	25.51059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	75484142	75486739	-114727816	+	MER57A-int	LTR	ERV1	3	2479	-3708	2
chr4	75505873	75505874	chunk0140_400_1	5.83706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	75505679	75507832	-114706723	+	L1MEg	LINE	L1	159	2492	-3654	2
chr4	75514971	75514972	chunk0140_401_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	75514832	75515141	-114699414	-	L2c	LINE	L2	-5	3382	3096	2
chr4	75531189	75531190	chunk0140_402_1	35.632	AR_DHT_Control	chr4	75531009	75531546	-114683009	+	MER68	LTR	ERVL	5	563	0	2
chr4	75532666	75532667	chunk0140_403_1	6.83133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	75531977	75533545	-114681010	-	THE1B-int	LTR	ERVL-MaLR	0	1580	1	2
chr4	75741086	75741087	chunk0140_412_1	8.27376	AR_DHT_Control	chr4	75740994	75741601	-114472954	-	Tigger3b	DNA	TcMar-Tigger	-9	1222	557	2
chr4	75827461	75827462	chunk0140_415_1	39.0417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	75827430	75827732	-114386823	+	AluJo	SINE	Alu	1	294	-18	2
chr4	76016566	76016567	chunk0140_423_1	6.3364	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	76016227	76017972	-114196583	-	L1M1	LINE	L1	-5580	1985	191	2
chr4	76115725	76115726	chunk0140_427_1	46.2584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	76115707	76115812	-114098743	-	L4_C_Mam	LINE	RTE-X	-379	4759	4629	2
chr4	76127985	76127986	chunk0140_429_1	6.3126	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76127846	76128129	-114086426	+	L1MD2	LINE	L1	25	327	-6220	2
chr4	76207493	76207494	chunk0140_439_1	21.27703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	76207391	76207511	-114007044	+	L2a	LINE	L2	3302	3426	0	2
chr4	76215332	76215333	chunk0140_442_1	7.91724	AR_DHT_Control	chr4	76215248	76215405	-113999150	-	MIRb	SINE	MIR	-110	158	8	2
chr4	76253212	76253213	chunk0140_443_1	8.91027	AR_DHT_Control	chr4	76252725	76253395	-113961160	-	L1MD2	LINE	L1	-10	6349	5640	2
chr4	76267050	76267051	chunk0140_444_1	8.86683	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76265868	76267203	-113947352	+	L2a	LINE	L2	1824	3423	-3	2
chr4	76387182	76387183	chunk0140_449_1	9.50609	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	76386645	76387404	-113827151	+	L1MA2	LINE	L1	144	925	-6640	2
chr4	76397543	76397544	chunk0140_450_1	7.83221	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76397193	76398384	-113816171	+	L1MC4	LINE	L1	6704	7444	-598	2
chr4	76434961	76434962	chunk0140_452_1	20.7679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	76434921	76435032	-113779523	-	MER5B	DNA	hAT-Charlie	0	178	68	2
chr4	76496220	76496221	chunk0140_457_1	5.6425	AR_DHT_Control	chr4	76495813	76496293	-113718262	-	L2	LINE	L2	-2105	1314	765	2
chr4	76594347	76594348	chunk0141_8_1	36.4125	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76594306	76594398	-113620157	+	L2b	LINE	L2	3265	3373	-2	2
chr4	76704245	76704246	chunk0141_17_1	170.7324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	76704211	76704823	-113509732	-	L2a	LINE	L2	-4	3422	2728	2
chr4	76880872	76880873	chunk0141_29_1	37.465	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	76880824	76880898	-113333657	+	L1ME4a	LINE	L1	5535	5610	-514	2
chr4	76923960	76923961	chunk0141_30_1	8.27376	AR_DHT_Control	chr4	76922989	76924128	-113290427	+	Tigger3b	DNA	TcMar-Tigger	88	1230	-1	2
chr4	76955361	76955362	chunk0141_34_1	9.38183	AR_DHT_Control	chr4	76955324	76955524	-113259031	-	L2c	LINE	L2	-280	3107	2910	2
chr4	77415823	77415824	chunk0141_49_1	22.18304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	77415207	77417319	-112797236	-	L1PA16	LINE	L1	-20	6146	3920	2
chr4	77472340	77472341	chunk0141_51_1	5.44099	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	77471227	77473371	-112741184	+	L1PA15-16	LINE	L1	1	1825	-5324	2
chr4	77604641	77604642	chunk0141_54_1	10.6535	AR_DHT_Control	chr4	77604440	77604694	-112609861	+	L3	LINE	CR1	3768	4002	-97	2
chr4	77636446	77636447	chunk0141_58_1	40.1706	AR_DHT_Control	chr4	77633165	77636836	-112577719	-	HERVL18-int	LTR	ERVL	-2338	3709	2	2
chr4	77637159	77637160	chunk0141_59_1	7.70791	AR_DHT_Control	chr4	77636845	77637162	-112577393	-	LTR18C	LTR	ERVL	-14	331	1	2
chr4	77679855	77679856	chunk0141_61_1	7.2534	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	77679626	77680417	-112534138	-	L1ME5	LINE	L1	-306	5888	5044	2
chr4	77880936	77880937	chunk0141_68_1	8.27376	AR_DHT_Control	chr4	77880773	77881248	-112333307	-	MLT1H	LTR	ERVL-MaLR	-7	542	13	2
chr4	77921886	77921887	chunk0141_69_1	209.2843	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	77921816	77921919	-112292636	+	Charlie4z	DNA	hAT-Charlie	28	123	-44	2
chr4	78052972	78052973	chunk0141_73_1	68.6982	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	78052918	78053260	-112161295	+	L1ME3G	LINE	L1	347	673	-251	2
chr4	78227608	78227609	chunk0141_78_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	78227430	78227896	-111986659	+	MamRTE1	LINE	RTE-BovB	3253	3765	-47	2
chr4	78602583	78602584	chunk0141_82_1	55.87437	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	78602567	78602674	-111611881	+	L2c	LINE	L2	3249	3362	-25	2
chr4	79098541	79098542	chunk0141_94_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79098523	79098662	-111115893	-	HAL1ME	LINE	L1	-2242	223	70	2
chr4	79133089	79133090	chunk0141_96_1	11.7947	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79133068	79133297	-111081258	+	MIRb	SINE	MIR	1	268	0	2
chr4	79224472	79224473	chunk0141_100_1	21.74804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79224367	79224711	-110989844	-	L2b	LINE	L2	-66	3321	2998	2
chr4	79258376	79258377	chunk0141_102_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	79257987	79259677	-110954878	+	MER52A	LTR	ERV1	1	1748	-7	2
chr4	79380080	79380081	chunk0141_103_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	79379308	79380823	-110833732	+	L1MA4A	LINE	L1	358	1920	-5646	2
chr4	79427268	79427269	chunk0141_104_1	25.1739	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79426623	79427338	-110787217	-	LTR50	LTR	ERVL	-11	784	8	2
chr4	79599006	79599007	chunk0141_107_1	45.83381	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79598912	79599068	-110615487	+	LFSINE_Vert	SINE	tRNA	284	430	-29	2
chr4	79690587	79690588	chunk0141_116_1	24.4026	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	79689772	79691148	-110523407	-	L1PB3	LINE	L1	0	6154	4688	2
chr4	79895274	79895275	chunk0141_121_1	5.95444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	79894133	79895998	-110318557	-	L1MD1	LINE	L1	-1218	5319	3381	2
chr4	80137817	80137818	chunk0141_125_1	7.63982	AR_DHT_Control	chr4	80137532	80138148	-110076407	-	CR1_Mam	LINE	CR1	-136	2068	1439	2
chr4	80162195	80162196	chunk0141_127_1	34.5341	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	80162134	80163162	-110051393	-	L1MD2	LINE	L1	-1198	5339	4338	2
chr4	80348413	80348414	chunk0141_128_1	20.4241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	80347392	80348603	-109865952	+	L1PA10	LINE	L1	6245	7458	-705	2
chr4	81119379	81119380	chunk0141_137_1	78.0404	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	81119096	81119678	-109094877	-	L1MC1	LINE	L1	-985	5161	4595	2
chr4	81237866	81237867	chunk0141_139_1	5.90945	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	81237544	81238027	-108976528	+	L2a	LINE	L2	2855	3424	-2	2
chr4	81378617	81378618	chunk0141_148_1	21.21927	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	81378090	81379093	-108835462	-	Tigger2b_Pri	DNA	TcMar-Tigger	-59	1009	1	2
chr4	81472407	81472408	chunk0141_149_1	7.47918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	81472384	81472546	-108742009	-	L2b	LINE	L2	-39	3387	3213	2
chr4	81655276	81655277	chunk0141_154_1	7.02243	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	81654769	81655719	-108558836	-	L1MA1	LINE	L1	-44	6258	5349	2
chr4	82308813	82308814	chunk0141_162_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	82308176	82309268	-107905287	-	L1M1	LINE	L1	-3953	3612	2513	2
chr4	82491756	82491757	chunk0141_167_1	113.292	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	82491668	82491801	-107722754	-	FLAM_C	SINE	Alu	-10	133	1	2
chr4	82909459	82909460	chunk0141_180_1	8.95381	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	82909370	82909704	-107304851	-	L1ME4a	LINE	L1	-90	6034	5681	2
chr4	83506615	83506616	chunk0141_190_1	47.78258	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	83506440	83509926	-106704629	-	HERVH48-int	LTR	ERV1	-2532	4122	586	2
chr4	83585011	83585012	chunk0141_192_1	151.4289	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	83584877	83585123	-106629432	+	Charlie7	DNA	hAT-Charlie	1864	2133	-479	2
chr4	83639169	83639170	chunk0141_195_1	29.27384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	83639157	83639356	-106575199	-	L2a	LINE	L2	-1	3425	3223	2
chr4	83874303	83874304	chunk0141_196_1	8.24382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	83874207	83874472	-106340083	+	MIR	SINE	MIR	10	268	0	2
chr4	83962686	83962687	chunk0141_197_1	6.41766	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	83962400	83962750	-106251805	-	LTR18A	LTR	ERVL	0	357	1	2
chr4	84259381	84259382	chunk0141_199_1	55.40943	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84259243	84262148	-105952407	+	L1PB4	LINE	L1	1377	4192	-2723	2
chr4	84260447	84260448	chunk0141_200_1	6.24504	AR_DHT_Control	chr4	84259243	84262148	-105952407	+	L1PB4	LINE	L1	1377	4192	-2723	2
chr4	84319385	84319386	chunk0141_203_1	40.39991	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84319377	84319415	-105895140	+	(GTTTT)n	Simple_repeat	Simple_repeat	1	40	0	2
chr4	84461689	84461690	chunk0141_206_1	9.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84461601	84461819	-105752736	-	L1ME1	LINE	L1	-4	6175	5912	2
chr4	84542396	84542397	chunk0141_207_1	25.328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	84542040	84542720	-105671835	-	Tigger3b	DNA	TcMar-Tigger	-514	717	29	2
chr4	84651652	84651653	chunk0141_220_1	43.02208	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84651610	84651718	-105562837	+	L2b	LINE	L2	3242	3349	-26	2
chr4	84772997	84772998	chunk0141_228_1	12.51048	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	84772979	84773031	-105441524	+	A-rich	Low_complexity	Low_complexity	1	54	0	2
chr4	85014433	85014434	chunk0141_244_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	85014232	85014525	-105200030	+	ERV3-16A3_I-int	LTR	ERVL	4838	5152	-74	2
chr4	85018982	85018983	chunk0141_245_1	12.79027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	85018876	85019152	-105195403	-	L2a	LINE	L2	-2	3424	3167	2
chr4	85032649	85032650	chunk0141_247_1	43.5555	AR_DHT_Control	chr4	85032387	85032803	-105181752	-	MER51B	LTR	ERV1	0	377	1	2
chr4	85046518	85046519	chunk0141_250_1	65.4193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	85043345	85049688	-105164867	+	L1PA7	LINE	L1	5	6466	-3	2
chr4	85567317	85567318	chunk0141_252_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	85566608	85567584	-104646971	-	L2a	LINE	L2	0	3426	2427	2
chr4	85726622	85726623	chunk0141_256_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	85726388	85726689	-104487866	-	LTR16	LTR	ERVL	-79	359	48	2
chr4	86384356	86384357	chunk0141_268_1	50.25551	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	86384312	86384734	-103829821	-	L2b	LINE	L2	-346	3073	2596	2
chr4	86443636	86443637	chunk0141_272_1	75.0453	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	86442869	86444330	-103770225	+	L1MCa	LINE	L1	5	1474	-5034	2
chr4	86572317	86572318	chunk0141_274_1	8.27376	AR_DHT_Control	chr4	86571828	86572718	-103641837	-	MER45B	DNA	hAT-Tip100	-48	992	1	2
chr4	86577655	86577656	chunk0141_275_1	50.5072	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	86577334	86577821	-103636734	+	HAL1	LINE	L1	1699	2213	-294	2
chr4	86661111	86661112	chunk0141_284_1	87.2797	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	86661004	86661301	-103553254	-	L1ME3	LINE	L1	-8	6154	5838	2
chr4	86824645	86824646	chunk0141_288_1	12.1886	AR_DHT_Control	chr4	86824581	86824839	-103389716	-	L1PA16	LINE	L1	0	6166	5882	2
chr4	86860971	86860972	chunk0141_294_1	23.8339	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	86860864	86861415	-103353140	+	L1ME1	LINE	L1	5597	6169	-10	2
chr4	87025762	87025763	chunk0141_300_1	9.77239	AR_DHT_Control	chr4	87025562	87025763	-103188792	+	MER20	DNA	hAT-Charlie	3	200	-19	2
chr4	87154315	87154316	chunk0141_314_1	23.11876	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	87153641	87155618	-103058937	+	L1MA4A	LINE	L1	4122	6110	-193	2
chr4	87156693	87156694	chunk0141_315_1	25.31622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	87156534	87157168	-103057387	+	L1MEd	LINE	L1	4664	5398	-748	2
chr4	87241459	87241460	chunk0141_319_1	31.66237	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	87241124	87241727	-102972828	+	L1MB7	LINE	L1	18	607	-6910	2
chr4	87360466	87360467	chunk0141_330_1	6.48643	AR_DHT_Control	chr4	87360297	87360473	-102854082	+	L1M5	LINE	L1	5563	5752	-372	2
chr4	87365605	87365606	chunk0141_331_1	5.6425	AR_DHT_Control	chr4	87365182	87365866	-102848689	+	PABL_A-int	LTR	ERV1	2606	3626	-2637	2
chr4	87432603	87432604	chunk0141_338_1	30.8164	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	87432438	87433147	-102781408	-	L1M3	LINE	L1	-1942	4198	3497	2
chr4	87456991	87456992	chunk0141_342_1	27.0556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	87456988	87457109	-102757446	+	L2a	LINE	L2	3288	3423	-3	2
chr4	87739915	87739916	chunk0141_350_1	18.7412	AR_DHT_Control	chr4	87739298	87740093	-102474462	-	L1MA3	LINE	L1	-8	6297	5495	2
chr4	87745231	87745232	chunk0141_351_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	87744989	87746311	-102468244	-	MER52D	LTR	ERV1	-740	1383	127	2
chr4	87866280	87866281	chunk0141_355_1	14.2911	AR_DHT_Control	chr4	87865962	87866648	-102347907	+	MER4CL34	LTR	ERV1	1	765	0	2
chr4	87929411	87929412	chunk0141_359_1	29.284	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	87929366	87929474	-102285081	+	MER103C	DNA	hAT-Charlie	125	241	-56	2
chr4	88041714	88041715	chunk0141_363_1	44.32884	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88041364	88041904	-102172651	-	MER68	LTR	ERVL	0	563	1	2
chr4	88044261	88044262	chunk0141_368_1	8.93049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88044053	88044279	-102170276	-	L2a	LINE	L2	0	3426	3205	2
chr4	88044755	88044756	chunk0141_369_1	9.48818	AR_DHT_Control	chr4	88044516	88044869	-102169686	-	Tigger4b	DNA	TcMar-Tigger	-6	355	1	2
chr4	88078944	88078945	chunk0141_372_1	5.73469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88078908	88078981	-102135574	-	L1ME4a	LINE	L1	-196	5928	5849	2
chr4	88177810	88177811	chunk0141_378_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	88177501	88180453	-102034102	+	L1MA4	LINE	L1	16	3021	-4544	2
chr4	88196871	88196872	chunk0141_379_1	24.24796	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88196740	88197345	-102017210	+	L1MCa	LINE	L1	354	943	-5565	2
chr4	88216509	88216510	chunk0141_384_1	7.36432	AR_DHT_Control	chr4	88216041	88216749	-101997806	+	ERVL-E-int	LTR	ERVL	3595	4323	-1344	2
chr4	88362151	88362152	chunk0141_393_1	44.5987	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88361775	88362255	-101852300	+	MER34C	LTR	ERV1	60	547	-4	2
chr4	88372054	88372055	chunk0141_394_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88371418	88372838	-101841717	+	L1MA4	LINE	L1	2698	4092	-2051	2
chr4	88411710	88411711	chunk0141_396_1	37.15833	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	88411613	88412039	-101802516	-	MLT1J2	LTR	ERVL-MaLR	-2	446	3	2
chr4	88515078	88515079	chunk0141_401_1	402.5972	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	88515036	88515534	-101699021	-	Tigger3c	DNA	TcMar-Tigger	-48	554	2	2
chr4	88584637	88584638	chunk0141_405_1	72.3673	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	88584467	88584840	-101629715	+	MLT1A1	LTR	ERVL-MaLR	1	406	-2	2
chr4	88600348	88600349	chunk0141_412_1	126.71251	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	88600277	88600487	-101614068	-	Tigger17	DNA	TcMar-Tigger	-23	2650	2433	2
chr4	88631964	88631965	chunk0141_423_1	83.7705	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	88631829	88632056	-101582499	+	L1MEf	LINE	L1	24	252	-6295	2
chr4	88812589	88812590	chunk0141_427_1	6.28518	AR_DHT_Control	chr4	88812476	88812820	-101401735	+	L2b	LINE	L2	3010	3370	-5	2
chr4	88976854	88976855	chunk0141_436_1	52.0739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	88976505	88977073	-101237482	+	Tigger3c	DNA	TcMar-Tigger	1	592	-10	2
chr4	89045539	89045540	chunk0141_441_1	30.4244	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89045084	89045741	-101168814	+	L1M7	LINE	L1	834	1540	-4703	2
chr4	89065976	89065977	chunk0141_442_1	15.3744	AR_DHT_Control	chr4	89065889	89065983	-101148572	+	ERV24B_Prim-int	LTR	ERV1	2308	2401	-5212	2
chr4	89119353	89119354	chunk0141_445_1	12.63472	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	89119299	89119510	-101095045	-	L1MC3	LINE	L1	-180	7605	7403	2
chr4	89413549	89413550	chunk0141_454_1	7.52431	AR_DHT_Control	chr4	89413537	89413706	-100800849	-	MIR	SINE	MIR	-40	222	41	2
chr4	89423945	89423946	chunk0141_456_1	35.8423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	89423855	89424040	-100790515	+	MER58A	DNA	hAT-Charlie	2	200	-24	2
chr4	89467583	89467584	chunk0141_460_1	22.24058	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	89467145	89467742	-100746813	-	LTR81C	LTR	Gypsy	-158	995	363	2
chr4	89468861	89468862	chunk0141_461_1	20.0159	AR_DHT_Control	chr4	89468610	89468967	-100745588	+	MLT1A0	LTR	ERVL-MaLR	1	358	-7	2
chr4	89542095	89542096	chunk0142_2_1	7.77075	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	89541486	89545263	-100669292	+	L1MA9	LINE	L1	465	4262	-3300	2
chr4	89681258	89681259	chunk0142_3_1	43.68207	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	89680646	89681260	-100533295	-	L1MEd	LINE	L1	-185	2027	1360	2
chr4	89839808	89839809	chunk0142_6_1	11.142	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89839748	89839882	-100374673	-	MIRb	SINE	MIR	-63	205	66	2
chr4	89848389	89848390	chunk0142_8_1	88.53622	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89848092	89848401	-100366154	+	AluJb	SINE	Alu	1	306	-6	2
chr4	89898229	89898230	chunk0142_12_1	5.3309	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	89898205	89898444	-100316111	-	MIR	SINE	MIR	0	262	3	2
chr4	90465731	90465732	chunk0142_24_1	59.0616	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	90465523	90465936	-99748619	-	Tigger6b	DNA	TcMar-Tigger	-1184	413	5	2
chr4	90573051	90573052	chunk0142_29_1	6.6833	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	90573045	90573701	-99640854	-	L1MA6	LINE	L1	-6320	1169	474	2
chr4	90603667	90603668	chunk0142_30_1	16.77389	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	90603610	90603775	-99610780	-	L1ME3G	LINE	L1	-468	456	310	2
chr4	90710047	90710048	chunk0142_34_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	90709273	90714135	-99500420	-	L1PA11	LINE	L1	-4	7605	9	2
chr4	90732520	90732521	chunk0142_35_1	26.9988	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	90732359	90732703	-99481852	-	MER68B	LTR	ERVL	-205	359	43	2
chr4	90851588	90851589	chunk0142_38_1	20.87572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	90851573	90851591	-99362964	+	(T)n	Simple_repeat	Simple_repeat	1	18	0	2
chr4	90959363	90959364	chunk0142_40_1	5.60881	AR_DHT_Control	chr4	90959329	90959486	-99255069	-	MIRb	SINE	MIR	-13	255	75	2
chr4	90962156	90962157	chunk0142_41_1	59.0808	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	90962013	90962211	-99252344	-	MIRb	SINE	MIR	-49	213	5	2
chr4	91256326	91256327	chunk0142_47_1	11.1716	AR_DHT_Control	chr4	91255588	91256671	-98957884	+	MER11B	LTR	ERVK	1	1236	0	2
chr4	91852690	91852691	chunk0142_54_1	11.0019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	91852093	91853502	-98361053	+	L1PA16	LINE	L1	4729	6166	0	2
chr4	92005033	92005034	chunk0142_57_1	8.75738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	92001488	92005395	-98209160	+	L1PA10	LINE	L1	3	3910	-2421	2
chr4	92069750	92069751	chunk0142_58_1	78.252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	92069454	92070571	-98143984	+	MSTA-int	LTR	ERVL-MaLR	1	1144	-487	2
chr4	92254961	92254962	chunk0142_61_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	92254186	92255466	-97959089	-	L1P3b	LINE	L1	-5141	1320	8	2
chr4	92789786	92789787	chunk0142_66_1	12.5708	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	92788937	92789870	-97424685	-	L1MEd	LINE	L1	-5452	1634	657	2
chr4	93607279	93607280	chunk0142_69_1	16.04481	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	93607189	93607918	-96606637	-	L1ME3G	LINE	L1	-163	761	1	2
chr4	93895309	93895310	chunk0142_80_1	14.4426	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	93895165	93896310	-96318245	-	L2a	LINE	L2	0	3426	2282	2
chr4	94014651	94014652	chunk0142_89_1	17.19755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94014530	94014703	-96199852	+	L2a	LINE	L2	3224	3426	0	2
chr4	94147943	94147944	chunk0142_90_1	23.6595	AR_DHT_Control	chr4	94144318	94148665	-96065890	-	L1P2	LINE	L1	-1847	4299	1	2
chr4	94299098	94299099	chunk0142_96_1	95.0254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	94298675	94299244	-95915311	-	Tigger6a	DNA	TcMar-Tigger	-481	602	1	2
chr4	94338953	94338954	chunk0142_101_1	253.7711	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr4	94338858	94338969	-95875586	+	L1M5	LINE	L1	4630	4742	-1404	2
chr4	94513711	94513712	chunk0142_112_1	40.5798	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94512318	94514128	-95700427	-	L1MA2	LINE	L1	-697	5607	3750	2
chr4	94623493	94623494	chunk0142_123_1	111.3452	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94623238	94623670	-95590885	+	L2c	LINE	L2	2915	3370	-17	2
chr4	94653273	94653274	chunk0142_128_1	43.37155	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	94653154	94653394	-95561161	+	MIRc	SINE	MIR	3	253	-15	2
chr4	94851889	94851890	chunk0142_140_1	14.5898	AR_DHT_Control	chr4	94851871	94851985	-95362570	+	L2b	LINE	L2	3258	3372	-3	2
chr4	94855918	94855919	chunk0142_141_1	5.25527	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94855886	94855953	-95358602	+	L1MA6	LINE	L1	6234	6300	0	2
chr4	94930670	94930671	chunk0142_145_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	94930606	94930714	-95283841	-	L2c	LINE	L2	-57	3330	3243	2
chr4	94951979	94951980	chunk0142_148_1	30.17854	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	94949615	94954143	-95260412	-	L1PA7	LINE	L1	-324	5830	1284	2
chr4	94955533	94955534	chunk0142_150_1	12.1886	AR_DHT_Control	chr4	94955520	94955558	-95258997	+	(TACTAA)n	Simple_repeat	Simple_repeat	1	38	0	2
chr4	95045537	95045538	chunk0142_155_1	24.94612	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	95045375	95045818	-95168737	+	L2c	LINE	L2	2855	3327	-60	2
chr4	95591521	95591522	chunk0142_174_1	231.3856	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr4	95591483	95591592	-94622963	-	L2a	LINE	L2	-3	3423	3316	2
chr4	96332500	96332501	chunk0142_187_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	96332443	96332714	-93881841	+	AluSx4	SINE	Alu	37	307	-3	2
chr4	96429893	96429894	chunk0142_189_1	34.27242	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	96429195	96429978	-93784577	-	MER21C	LTR	ERVL	-66	872	123	2
chr4	97250759	97250760	chunk0142_200_1	17.55019	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	97250757	97250943	-92963612	-	L2b	LINE	L2	0	3387	3222	2
chr4	97275711	97275712	chunk0142_202_1	45.9047	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	97275650	97275852	-92938703	+	Tigger9b	DNA	TcMar-Tigger	2	197	-427	2
chr4	97337377	97337378	chunk0142_203_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	97336800	97343043	-92871512	+	L1PA10	LINE	L1	192	6349	-4	2
chr4	97457428	97457429	chunk0142_207_1	21.5318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	97457339	97457682	-92756873	+	MER57E1	LTR	ERV1	12	372	0	2
chr4	97555305	97555306	chunk0142_210_1	160.0328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	97554843	97555399	-92659156	+	MER34C_	LTR	ERV1	1	585	0	2
chr4	97624441	97624442	chunk0142_211_1	82.1293	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	97623639	97624920	-92589635	-	L1PA10	LINE	L1	-12	6156	4854	2
chr4	97775570	97775571	chunk0142_218_1	42.6528	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	97775467	97775575	-92438980	-	L2a	LINE	L2	-14	3412	3302	2
chr4	97809603	97809604	chunk0142_220_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	97809321	97809909	-92404646	+	MLT1E3	LTR	ERVL-MaLR	1	616	-8	2
chr4	97903482	97903483	chunk0142_222_1	15.7965	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	97903392	97903601	-92310954	+	L1M5	LINE	L1	3025	3267	-2879	2
chr4	97912444	97912445	chunk0142_223_1	9.21264	AR_DHT_Control	chr4	97910849	97912787	-92301768	+	L1PA10	LINE	L1	1	1897	-4586	2
chr4	98226647	98226648	chunk0142_225_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	98226108	98226772	-91987783	+	L1MEi	LINE	L1	1	670	-1542	2
chr4	98346377	98346378	chunk0142_229_1	23.41414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	98346331	98346492	-91868063	-	Charlie16a	DNA	hAT-Charlie	-122	220	64	2
chr4	98661919	98661920	chunk0142_238_1	56.493	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	98661643	98661993	-91552562	+	L2c	LINE	L2	2992	3387	0	2
chr4	98722103	98722104	chunk0142_240_1	37.1304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	98721795	98722123	-91492432	-	L2c	LINE	L2	-8	3379	3038	2
chr4	98861271	98861272	chunk0142_242_1	36.6941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	98861199	98861683	-91352872	+	L2a	LINE	L2	2891	3425	-1	2
chr4	98908961	98908962	chunk0142_246_1	57.08981	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	98908891	98908986	-91305569	+	MER94	DNA	hAT-Blackjack	35	130	-4	2
chr4	98918801	98918802	chunk0142_250_1	45.96243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	98918565	98918999	-91295556	+	L1ME4b	LINE	L1	391	879	-13	2
chr4	98946549	98946550	chunk0142_251_1	9.21264	AR_DHT_Control	chr4	98946245	98947477	-91267078	+	MER65-int	LTR	ERV1	2471	3373	-3266	2
chr4	98986958	98986959	chunk0142_253_1	11.9502	AR_DHT_Control	chr4	98986844	98986991	-91227564	-	L2a	LINE	L2	-27	3399	3203	2
chr4	99155173	99155174	chunk0142_259_1	7.36432	AR_DHT_Control	chr4	99155053	99155555	-91059000	+	MER4-int	LTR	ERV1	6121	6620	-56	2
chr4	99168033	99168034	chunk0142_260_1	9.63129	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	99167336	99170108	-91044447	-	L1PB3	LINE	L1	-161	6762	3993	2
chr4	99168651	99168652	chunk0142_261_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	99167336	99170108	-91044447	-	L1PB3	LINE	L1	-161	6762	3993	2
chr4	99230416	99230417	chunk0142_263_1	79.9269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	99227147	99231611	-90982944	-	L1PA7	LINE	L1	-2	6152	1673	2
chr4	99453901	99453902	chunk0142_274_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	99448268	99455419	-90759136	-	L1PA14	LINE	L1	-21	8135	562	2
chr4	99455507	99455508	chunk0142_275_1	33.9083	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	99455419	99455579	-90758976	+	MER65A	LTR	ERV1	290	445	0	2
chr4	99701959	99701960	chunk0142_279_1	13.2288	AR_DHT_Control	chr4	99698754	99705199	-90509356	+	L1PA7	LINE	L1	8	6464	-5	2
chr4	99996633	99996634	chunk0142_283_1	232.4829	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	99996478	99996890	-90217665	-	MLT1B	LTR	ERVL-MaLR	0	390	1	2
chr4	100018243	100018244	chunk0142_284_1	238.4277	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100018086	100018272	-90196283	-	Charlie7	DNA	hAT-Charlie	-2360	252	35	2
chr4	100074250	100074251	chunk0142_287_1	7.91804	AR_DHT_Control	chr4	100073777	100074604	-90139951	-	L1MC1	LINE	L1	-17	6316	5471	2
chr4	100143782	100143783	chunk0142_290_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100143754	100144002	-90070553	+	MSTD	LTR	ERVL-MaLR	78	371	-37	2
chr4	100145640	100145641	chunk0142_291_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100144873	100146359	-90068196	+	MSTD-int	LTR	ERVL-MaLR	191	1730	-5	2
chr4	100157699	100157700	chunk0142_292_1	12.1886	AR_DHT_Control	chr4	100157171	100157867	-90056688	-	Charlie1a	DNA	hAT-Charlie	-713	742	1	2
chr4	100206064	100206065	chunk0142_293_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100206062	100206448	-90008107	+	MER57B2	LTR	ERV1	1	396	-7	2
chr4	100238233	100238234	chunk0142_294_1	34.46582	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100238212	100238354	-89976201	-	L1MA5	LINE	L1	-2	6298	6161	2
chr4	100444127	100444128	chunk0142_298_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100443149	100445248	-89769307	-	L1MA9	LINE	L1	-5071	2495	403	2
chr4	100483168	100483169	chunk0142_299_1	35.9054	AR_DHT_Control	chr4	100483118	100483343	-89731212	-	MIR	SINE	MIR	-16	246	9	2
chr4	100585945	100585946	chunk0142_307_1	20.799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100585896	100586075	-89628480	-	Charlie23a	DNA	hAT-Charlie	-23	316	137	2
chr4	100592823	100592824	chunk0142_308_1	35.2798	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	100592744	100592827	-89621728	-	MER53	DNA	hAT	-108	85	2	2
chr4	100593231	100593232	chunk0142_309_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	100592857	100593534	-89621021	+	MamGypLTR1a	LTR	Gypsy	30	778	-6	2
chr4	100630387	100630388	chunk0142_312_1	265.8593	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100630366	100630485	-89584070	+	L1M5	LINE	L1	5636	5752	-427	2
chr4	100679658	100679659	chunk0142_314_1	23.755	AR_DHT_Control	chr4	100679491	100679684	-89534871	+	Tigger17c	DNA	TcMar-Tigger	2	198	-990	2
chr4	100722483	100722484	chunk0142_315_1	18.93648	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	100722269	100722511	-89492044	+	MIRb	SINE	MIR	1	244	-24	2
chr4	100829372	100829373	chunk0142_318_1	8.64577	AR_DHT_Control	chr4	100829051	100829587	-89384968	-	MER68	LTR	ERVL	0	563	1	2
chr4	100859379	100859380	chunk0142_320_1	26.57753	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	100859351	100861788	-89352767	-	L1PBb	LINE	L1	-832	6105	3588	2
chr4	101021127	101021128	chunk0142_326_1	7.08133	AR_DHT_Control	chr4	101021073	101021155	-89193400	-	L2c	LINE	L2	-113	3274	3183	2
chr4	101161235	101161236	chunk0142_328_1	39.5609	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	101160962	101161317	-89053238	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	2
chr4	101210463	101210464	chunk0142_331_1	9.28592	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	101210337	101210561	-89003994	+	MIR	SINE	MIR	1	262	0	2
chr4	101468357	101468358	chunk0142_345_1	6.48643	AR_DHT_Control	chr4	101468269	101468420	-88746135	+	L1M6	LINE	L1	1479	1620	-4876	2
chr4	101602539	101602540	chunk0142_347_1	11.88692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	101601485	101602647	-88611908	+	Tigger3b	DNA	TcMar-Tigger	1	1208	-23	2
chr4	101865925	101865926	chunk0142_354_1	8.08101	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	101865248	101866628	-88347927	+	L1MCa	LINE	L1	823	2120	-5008	2
chr4	101885744	101885745	chunk0142_357_1	37.684	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	101885715	101886110	-88328445	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr4	101946334	101946335	chunk0142_365_1	47.8969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	101945760	101946968	-88267587	+	L3	LINE	CR1	1484	2925	-1174	2
chr4	102049795	102049796	chunk0142_373_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	102049587	102050289	-88164266	+	MER50	LTR	ERV1	4	711	-23	2
chr4	102097333	102097334	chunk0142_375_1	6.31759	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102097180	102097499	-88117056	+	L1M4	LINE	L1	4451	4767	-1379	2
chr4	102099001	102099002	chunk0142_377_1	16.47617	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	102098297	102099482	-88115073	+	L1ME1	LINE	L1	4855	6161	-18	2
chr4	102282402	102282403	chunk0142_379_1	16.37408	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102282355	102282441	-87932114	+	Tigger10	DNA	TcMar-Tigger	163	245	-1599	2
chr4	102312060	102312061	chunk0142_382_1	4.59338	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102312015	102312139	-87902416	-	MIR	SINE	MIR	-25	237	79	2
chr4	102393394	102393395	chunk0142_384_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102393218	102393736	-87820819	+	L1MC5	LINE	L1	8317	8874	-430	2
chr4	102537477	102537478	chunk0142_387_1	7.63982	AR_DHT_Control	chr4	102537410	102537562	-87676993	+	MamRTE1	LINE	RTE-BovB	3432	3583	-229	2
chr4	102542484	102542485	chunk0142_389_1	9.08241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102542384	102542497	-87672058	-	L1ME3Cz	LINE	L1	-7	990	864	2
chr4	102561023	102561024	chunk0142_390_1	7.36432	AR_DHT_Control	chr4	102560891	102561050	-87653505	-	MIRb	SINE	MIR	-78	190	30	2
chr4	102575936	102575937	chunk0142_391_1	39.9548	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	102575476	102575971	-87638584	+	L2a	LINE	L2	2916	3426	0	2
chr4	102706991	102706992	chunk0142_400_1	8.27376	AR_DHT_Control	chr4	102704963	102709038	-87505517	+	L1MA6	LINE	L1	719	4868	-2697	2
chr4	102776093	102776094	chunk0142_402_1	4.38465	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	102776091	102776187	-87438368	+	L1MB7	LINE	L1	5320	5415	-759	2
chr4	102781931	102781932	chunk0142_403_1	14.4295	AR_DHT_Control	chr4	102781641	102782101	-87432454	+	MER70A	LTR	ERVL	1	472	0	2
chr4	102813637	102813638	chunk0142_404_1	11.3369	AR_DHT_Control	chr4	102813380	102813718	-87400837	-	L2	LINE	L2	-780	2639	2216	2
chr4	102939214	102939215	chunk0142_406_1	12.1886	AR_DHT_Control	chr4	102937745	102941516	-87273039	+	L1PA15	LINE	L1	2479	6135	-650	2
chr4	103131669	103131670	chunk0142_413_1	89.4619	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	103129751	103132280	-87082275	+	L1MC1	LINE	L1	3908	6502	-6	2
chr4	103152689	103152690	chunk0142_415_1	24.8643	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	103152220	103152986	-87061569	+	L1ME1	LINE	L1	5337	6170	-9	2
chr4	103272288	103272289	chunk0142_418_1	37.96932	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	103271103	103273590	-86940965	-	ERVL-B4-int	LTR	ERVL	-137	5577	3042	2
chr4	103425033	103425034	chunk0142_422_1	8.27376	AR_DHT_Control	chr4	103424943	103425102	-86789453	+	LTR81B	LTR	Gypsy	159	320	-1073	2
chr4	103755036	103755037	chunk0142_423_1	38.1877	AR_DHT_Control	chr4	103754949	103755259	-86459296	+	LTR18A	LTR	ERVL	1	318	-39	2
chr4	104571458	104571459	chunk0142_427_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	104571450	104571910	-85642645	+	LTR33A_	LTR	ERVL	7	529	-2	2
chr4	105182419	105182420	chunk0142_437_1	22.76984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	105182405	105182449	-85032106	-	MamRep38	DNA	hAT	-250	45	1	2
chr4	105345564	105345565	chunk0142_441_1	132.7205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	105345546	105346102	-84868453	-	Tigger12c	DNA	TcMar-Tigger	0	734	97	2
chr4	105436710	105436711	chunk0142_445_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	105435583	105437239	-84777316	+	L1PA15-16	LINE	L1	4470	6145	-714	2
chr4	105459044	105459045	chunk0142_447_1	13.02697	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	105458967	105459064	-84755491	+	L2a	LINE	L2	3331	3422	-4	2
chr4	105831340	105831341	chunk0143_10_1	29.3109	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	105831262	105831410	-84383145	-	MIR3	SINE	MIR	-15	193	32	2
chr4	105837094	105837095	chunk0143_11_1	12.5821	AR_DHT_Control	chr4	105837082	105837580	-84376975	+	MER74A	LTR	ERVL	1	558	0	2
chr4	105859581	105859582	chunk0143_13_1	22.33084	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	105859543	105859667	-84354888	+	L2a	LINE	L2	3269	3408	-18	2
chr4	106056811	106056812	chunk0143_25_1	28.5925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	106056757	106056820	-84157735	+	LTR84b	LTR	ERVL	121	184	-577	2
chr4	106361195	106361196	chunk0143_31_1	6.48643	AR_DHT_Control	chr4	106361127	106361290	-83853265	-	L2a	LINE	L2	0	3426	3276	2
chr4	107126903	107126904	chunk0143_37_1	45.4087	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	107126789	107127087	-83087468	+	L2c	LINE	L2	2911	3225	-162	2
chr4	107392857	107392858	chunk0143_40_1	9.50609	AR_DHT_Control	chr4	107392856	107392881	-82821674	+	(ACAA)n	Simple_repeat	Simple_repeat	1	25	0	2
chr4	107531911	107531912	chunk0143_41_1	35.9575	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	107531707	107531986	-82682569	+	MLT1K	LTR	ERVL-MaLR	303	600	-10	2
chr4	107603581	107603582	chunk0143_45_1	24.162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	107603483	107603690	-82610865	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr4	107682457	107682458	chunk0143_52_1	134.2345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	107682312	107682592	-82531963	-	Tigger17c	DNA	TcMar-Tigger	-883	305	2	2
chr4	107787623	107787624	chunk0143_61_1	51.99	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	107787525	107787688	-82426867	+	L2a	LINE	L2	3196	3383	-43	2
chr4	108058835	108058836	chunk0143_68_1	68.2966	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	108058588	108058847	-82155708	+	L2c	LINE	L2	3122	3373	-14	2
chr4	108109591	108109592	chunk0143_73_1	9.74833	AR_DHT_Control	chr4	108109368	108109616	-82104939	+	MIR	SINE	MIR	2	252	-10	2
chr4	108135435	108135436	chunk0143_75_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	108134888	108135446	-82079109	+	L3	LINE	CR1	3151	3780	-319	2
chr4	108153117	108153118	chunk0143_77_1	40.8284	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	108153104	108153406	-82061149	+	LTR79	LTR	ERVL	80	426	-101	2
chr4	108153850	108153851	chunk0143_78_1	14.15153	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	108153626	108154101	-82060454	+	L1ME4a	LINE	L1	5601	6107	-17	2
chr4	108206658	108206659	chunk0143_80_1	16.363	AR_DHT_Control	chr4	108206590	108206863	-82007692	-	MLT1L	LTR	ERVL-MaLR	-41	569	309	2
chr4	108236029	108236030	chunk0143_81_1	9.20607	AR_DHT_Control	chr4	108235825	108236082	-81978473	+	L2c	LINE	L2	3020	3307	-80	2
chr4	108264927	108264928	chunk0143_85_1	128.2774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	108264504	108264975	-81949580	+	Tigger3	DNA	TcMar-Tigger	2547	3028	-1	2
chr4	108292386	108292387	chunk0143_88_1	18.46679	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	108292367	108292462	-81922093	+	MER131	DNA?	DNA?	2	98	-117	2
chr4	108389621	108389622	chunk0143_95_1	10.88255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	108389399	108390114	-81824441	+	L1MD1	LINE	L1	5557	6281	-352	2
chr4	108480955	108480956	chunk0143_100_1	49.4928	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	108480827	108480993	-81733562	+	MIR3	SINE	MIR	34	204	-4	2
chr4	108592829	108592830	chunk0143_104_1	73.1444	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	108592759	108592975	-81621580	+	HAL1	LINE	L1	697	932	-1575	2
chr4	108645079	108645080	chunk0143_106_1	14.8182	AR_DHT_Control	chr4	108644797	108647246	-81567309	-	ERVL-E-int	LTR	ERVL	-1024	4643	2051	2
chr4	108769537	108769538	chunk0143_109_1	16.1812	AR_DHT_Control	chr4	108769510	108769706	-81444849	+	L2a	LINE	L2	3200	3426	0	2
chr4	109362967	109362968	chunk0143_115_1	11.0019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	109362932	109363539	-80851016	+	Tigger17a	DNA	TcMar-Tigger	1	653	-1	2
chr4	109381414	109381415	chunk0143_116_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	109381394	109381544	-80833011	-	MLT1M	LTR	ERVL-MaLR	-465	207	63	2
chr4	109499720	109499721	chunk0143_126_1	4.89968	AR_DHT_Control	chr4	109499542	109500000	-80714555	+	Tigger3b	DNA	TcMar-Tigger	1	464	-767	2
chr4	109501397	109501398	chunk0143_127_1	9.01503	AR_DHT_Control	chr4	109500958	109501401	-80713154	+	Tigger3	DNA	TcMar-Tigger	2575	3028	-1	2
chr4	109611174	109611175	chunk0143_128_1	44.1925	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	109610900	109611529	-80603026	+	LTR68	LTR	ERV1	99	740	0	2
chr4	109666355	109666356	chunk0143_131_1	60.76877	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	109666071	109666745	-80547810	-	L1MC1	LINE	L1	-440	6068	5363	2
chr4	109728341	109728342	chunk0143_134_1	19.7212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	109728020	109728386	-80486169	+	L2a	LINE	L2	3026	3426	0	2
chr4	109734257	109734258	chunk0143_136_1	70.9441	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	109734177	109734521	-80480034	-	L2	LINE	L2	-1095	2324	1899	2
chr4	109873430	109873431	chunk0143_140_1	16.50794	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	109873283	109873573	-80340982	+	MSTD	LTR	ERVL-MaLR	141	394	-2	2
chr4	109914653	109914654	chunk0143_142_1	19.20325	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	109914578	109914689	-80299866	+	L2b	LINE	L2	3285	3385	-2	2
chr4	109966937	109966938	chunk0143_147_1	21.7574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	109966061	109967626	-80246929	-	L1PB4	LINE	L1	-7	6149	4564	2
chr4	110248851	110248852	chunk0143_159_1	17.23785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	110248491	110249142	-79965413	-	LTR62	LTR	ERVL	-1	708	48	2
chr4	110767172	110767173	chunk0143_164_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	110767102	110767624	-79446931	-	MER45C	DNA	hAT-Tip100	-320	633	113	2
chr4	110772239	110772240	chunk0143_165_1	16.5991	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	110772141	110772352	-79442203	+	X7C_LINE	LINE	CR1	1	230	-6	2
chr4	112113203	112113204	chunk0143_181_1	7.3092	AR_DHT_Control	chr4	112113124	112113319	-78101236	+	HAL1	LINE	L1	2011	2214	-293	2
chr4	112238102	112238103	chunk0143_184_1	44.8133	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	112237915	112238136	-77976419	-	MER58A	DNA	hAT-Charlie	0	224	1	2
chr4	112884546	112884547	chunk0143_197_1	43.6367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	112884285	112884615	-77329940	-	MER58B	DNA	hAT-Charlie	-3	338	1	2
chr4	113761743	113761744	chunk0143_218_1	5.0408	AR_DHT_Control	chr4	113761738	113761855	-76452700	+	L1MDb	LINE	L1	597	712	-5697	2
chr4	113844395	113844396	chunk0143_221_1	45.60485	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	113844128	113844648	-76369907	-	LTR16E2	LTR	ERVL	0	568	2	2
chr4	114116309	114116310	chunk0143_225_1	87.4486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	114116202	114116316	-76098239	+	L2a	LINE	L2	3305	3416	-10	2
chr4	114326576	114326577	chunk0143_232_1	11.4948	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	114326187	114326629	-75887926	-	MER90	LTR	ERV1	-113	462	35	2
chr4	114424712	114424713	chunk0143_233_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	114424208	114429586	-75784969	-	L1PA10	LINE	L1	-474	5879	386	2
chr4	114562721	114562722	chunk0143_238_1	146.8644	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	114562706	114562806	-75651749	+	L2b	LINE	L2	3272	3374	-1	2
chr4	114594104	114594105	chunk0143_241_1	14.21824	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	114593415	114595404	-75619151	-	HERV1_I-int	LTR	ERV1	-6257	2544	580	2
chr4	114652988	114652989	chunk0143_242_1	53.47755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	114652918	114653124	-75561431	-	L1M6	LINE	L1	-5891	605	398	2
chr4	114693165	114693166	chunk0143_243_1	33.7129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	114691227	114693172	-75521383	+	L2a	LINE	L2	1436	3426	0	2
chr4	115655956	115655957	chunk0143_253_1	12.3561	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	115655832	115656077	-74558478	-	L1MC3	LINE	L1	-850	6156	5918	2
chr4	115761099	115761100	chunk0143_256_1	26.7594	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	115761030	115761745	-74452810	-	MLT1J-int	LTR	ERVL-MaLR	-634	753	4	2
chr4	115866680	115866681	chunk0143_259_1	68.8403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	115866593	115866799	-74347756	-	MER58A	DNA	hAT-Charlie	-16	208	5	2
chr4	116485612	116485613	chunk0143_268_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	116485026	116485933	-73728622	-	L1PA16	LINE	L1	-456	5710	4813	2
chr4	116553287	116553288	chunk0143_269_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	116552609	116554170	-73660385	-	L1PA13	LINE	L1	-4988	1797	9	2
chr4	116626579	116626580	chunk0143_270_1	44.6866	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	116626545	116626663	-73587892	-	MIRb	SINE	MIR	-148	120	3	2
chr4	116935301	116935302	chunk0143_278_1	20.58506	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	116935151	116935430	-73279125	-	L1MC2	LINE	L1	0	6344	6064	2
chr4	117153325	117153326	chunk0143_280_1	30.82815	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	117152961	117153676	-73060879	-	L1PA15-16	LINE	L1	-5530	1323	715	2
chr4	117203439	117203440	chunk0143_282_1	73.4128	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	117202695	117203861	-73010694	+	L1MA2	LINE	L1	6541	7722	-1	2
chr4	117760877	117760878	chunk0143_286_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	117760696	117762167	-72452388	+	MER92-int	LTR	ERV1	1068	2393	-2825	2
chr4	118746652	118746653	chunk0143_298_1	106.8846	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	118746571	118746719	-71467836	+	L2b	LINE	L2	2967	3104	-271	2
chr4	119013401	119013402	chunk0143_310_1	16.44926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	119013006	119014140	-71200415	+	Charlie1a	DNA	hAT-Charlie	1	1183	-272	2
chr4	119081217	119081218	chunk0143_313_1	69.7426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	119081154	119081474	-71133081	-	L2c	LINE	L2	-39	3348	3044	2
chr4	119100834	119100835	chunk0143_315_1	11.8978	AR_DHT_Control	chr4	119100645	119100854	-71113701	-	MER58A	DNA	hAT-Charlie	-1	223	11	2
chr4	119791795	119791796	chunk0143_326_1	10.1791	AR_DHT_Control	chr4	119791704	119792128	-70422427	-	L1ME1	LINE	L1	-503	5676	5254	2
chr4	120281675	120281676	chunk0143_334_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	120281395	120282415	-69932140	-	L1ME3	LINE	L1	-105	6074	4997	2
chr4	120696555	120696556	chunk0143_335_1	9.21264	AR_DHT_Control	chr4	120696527	120696692	-69517863	+	MIRb	SINE	MIR	63	254	-14	2
chr4	121220780	121220781	chunk0143_338_1	6.48643	AR_DHT_Control	chr4	121220371	121220872	-68993683	-	Tigger13a	DNA	TcMar-Tigger	-237	534	9	2
chr4	121572661	121572662	chunk0143_340_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	121567208	121573466	-68641089	+	L1PA7	LINE	L1	8	6153	-1	2
chr4	121599172	121599173	chunk0143_342_1	246.5233	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	121599091	121599201	-68615354	-	MIR3	SINE	MIR	-82	180	59	2
chr4	121619188	121619189	chunk0143_344_1	18.2232	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	121616231	121622378	-68592177	+	L1PA6	LINE	L1	7	6153	-1	2
chr4	121721779	121721780	chunk0143_346_1	17.66486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	121721715	121721972	-68492583	-	MamSINE1	SINE	tRNA-RTE	-15	275	15	2
chr4	121741809	121741810	chunk0143_347_1	7.03714	AR_DHT_Control	chr4	121741672	121741886	-68472669	-	L1ME3G	LINE	L1	-509	488	240	2
chr4	121957397	121957398	chunk0143_351_1	171.8684	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	121957256	121957734	-68256821	+	LTR40a	LTR	ERVL	5	519	0	2
chr4	122069734	122069735	chunk0143_357_1	61.26637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	122068612	122070916	-68143639	-	L1MC4	LINE	L1	0	8042	5440	2
chr4	122150158	122150159	chunk0143_362_1	6.54035	AR_DHT_Control	chr4	122150046	122150665	-68063890	+	L1MD1	LINE	L1	5674	6242	0	2
chr4	122252630	122252631	chunk0143_369_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	122251984	122254093	-67960462	+	L1M1	LINE	L1	782	2933	-4632	2
chr4	122568898	122568899	chunk0143_374_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	122566734	122569177	-67645378	-	L1MA3	LINE	L1	-1458	6107	3653	2
chr4	122700377	122700378	chunk0143_385_1	143.6961	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	122700197	122700669	-67513886	+	MER70A	LTR	ERVL	1	472	0	2
chr4	122843132	122843133	chunk0143_388_1	32.25399	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	122843014	122843588	-67370967	-	L2c	LINE	L2	-45	3342	2702	2
chr4	123121600	123121601	chunk0143_394_1	56.9343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	123120565	123121785	-67092770	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	2
chr4	123130637	123130638	chunk0143_396_1	4.36845	AR_DHT_Control	chr4	123130316	123131250	-67083305	-	L1ME1	LINE	L1	-65	6114	5137	2
chr4	123326737	123326738	chunk0143_407_1	20.42233	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	123326694	123326850	-66887705	+	L2a	LINE	L2	3256	3426	0	2
chr4	123386755	123386756	chunk0143_411_1	57.5593	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	123386562	123386998	-66827557	+	Kanga1a	DNA	TcMar-Tc2	3	448	-306	2
chr4	123753951	123753952	chunk0143_424_1	86.3657	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	123753212	123754863	-66459692	+	L1ME3A	LINE	L1	4377	6170	-3	2
chr4	123793507	123793508	chunk0143_426_1	35.1139	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	123792343	123794491	-66420064	-	L1PB2	LINE	L1	-2	6865	4726	2
chr4	123924724	123924725	chunk0143_438_1	112.0608	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	123924590	123924832	-66289723	+	MLT1H2	LTR	ERVL-MaLR	26	279	-270	2
chr4	124013861	124013862	chunk0143_440_1	4.83532	AR_DHT_Control	chr4	124008386	124014541	-66200014	-	L1PA6	LINE	L1	-1	6326	177	2
chr4	124133958	124133959	chunk0143_445_1	33.56641	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	124133660	124134161	-66080394	-	LTR40a	LTR	ERVL	-5	514	3	2
chr4	124438062	124438063	chunk0144_3_1	67.3852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	124437740	124438669	-65775886	-	L2a	LINE	L2	-3	3423	2448	2
chr4	124504857	124504858	chunk0144_7_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	124504724	124505232	-65709323	-	L3	LINE	CR1	-634	3465	2898	2
chr4	124754153	124754154	chunk0144_12_1	8.27376	AR_DHT_Control	chr4	124753979	124754203	-65460352	-	MIR	SINE	MIR	0	262	13	2
chr4	124814059	124814060	chunk0144_16_1	14.40836	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	124813817	124814069	-65400486	-	L2b	LINE	L2	-32	3394	3142	2
chr4	124863847	124863848	chunk0144_18_1	8.52761	AR_DHT_Control	chr4	124863566	124864161	-65350394	+	LTR48B	LTR	ERV1	1	641	-3	2
chr4	124999455	124999456	chunk0144_26_1	6.98722	AR_DHT_Control	chr4	124999174	124999552	-65215003	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr4	125013987	125013988	chunk0144_28_1	16.05152	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	125013581	125014020	-65200535	-	L2a	LINE	L2	-18	3408	2942	2
chr4	125655399	125655400	chunk0144_38_1	43.6588	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	125655276	125655466	-64559089	+	MLT1J1	LTR	ERVL-MaLR	54	250	-198	2
chr4	125672514	125672515	chunk0144_40_1	9.87065	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	125672359	125672866	-64541689	-	L2a	LINE	L2	-310	3116	2577	2
chr4	125843357	125843358	chunk0144_42_1	31.5957	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	125843095	125843458	-64371097	-	L1MDb	LINE	L1	-5063	1346	996	2
chr4	126169119	126169120	chunk0144_44_1	17.8225	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	126166916	126169695	-64044860	+	L1PB4	LINE	L1	2966	5819	-337	2
chr4	126202244	126202245	chunk0144_45_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	126201856	126202643	-64011912	-	LTR2752	LTR	ERV1	-489	774	1	2
chr4	126553488	126553489	chunk0144_47_1	7.36432	AR_DHT_Control	chr4	126553407	126553691	-63660864	+	MER70B	LTR	ERVL	1	284	-294	2
chr4	126978429	126978430	chunk0144_58_1	27.8709	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	126978347	126979324	-63235231	-	Tigger1	DNA	TcMar-Tigger	0	2418	1413	2
chr4	127007953	127007954	chunk0144_61_1	26.3898	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	127007920	127008132	-63206423	+	MER58A	DNA	hAT-Charlie	3	220	-4	2
chr4	127058830	127058831	chunk0144_63_1	9.95686	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	127056162	127059060	-63155495	+	L1M1	LINE	L1	1776	4601	-2961	2
chr4	127224052	127224053	chunk0144_64_1	17.8537	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	127221331	127224377	-62990178	-	L1PA8A	LINE	L1	-12	6119	3074	2
chr4	127252577	127252578	chunk0144_65_1	13.4475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	127252550	127252678	-62961877	+	L2c	LINE	L2	3262	3386	-1	2
chr4	127541011	127541012	chunk0144_67_1	16.27941	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	127540869	127541140	-62673415	+	MER34C_	LTR	ERV1	309	585	0	2
chr4	127546581	127546582	chunk0144_68_1	12.1886	AR_DHT_Control	chr4	127546526	127546717	-62667838	-	L2c	LINE	L2	-79	3308	3070	2
chr4	127709205	127709206	chunk0144_70_1	82.8315	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	127708983	127709418	-62505137	+	LTR16	LTR	ERVL	5	435	-3	2
chr4	127896251	127896252	chunk0144_74_1	8.27376	AR_DHT_Control	chr4	127896066	127896307	-62318248	-	MIRb	SINE	MIR	-8	260	9	2
chr4	127955002	127955003	chunk0144_76_1	19.32934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	127954628	127955270	-62259285	+	L1MB2	LINE	L1	5134	5783	-400	2
chr4	128160112	128160113	chunk0144_81_1	12.1004	AR_DHT_Control	chr4	128160042	128160226	-62054329	-	MER58A	DNA	hAT-Charlie	-34	190	1	2
chr4	128163831	128163832	chunk0144_82_1	23.13036	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	128163788	128163932	-62050623	+	LTR41B	LTR	ERVL	1	127	-631	2
chr4	128168783	128168784	chunk0144_84_1	14.43548	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	128168579	128169522	-62045033	-	L1ME1	LINE	L1	-2251	3895	2826	2
chr4	128255987	128255988	chunk0144_88_1	9.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	128255943	128256400	-61958155	-	MLT2C2	LTR	ERVL	-8	456	3	2
chr4	128349955	128349956	chunk0144_89_1	14.39984	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	128349945	128349987	-61864568	-	L2a	LINE	L2	-9	3417	3375	2
chr4	128504412	128504413	chunk0144_98_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	128504284	128505033	-61709522	-	LTR1E	LTR	ERV1	0	804	1	2
chr4	128509785	128509786	chunk0144_99_1	13.6789	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	128509638	128510144	-61704411	-	Charlie17b	DNA	hAT-Charlie	-1	1203	679	2
chr4	128638696	128638697	chunk0144_110_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	128638485	128638872	-61575683	+	MLT1B	LTR	ERVL-MaLR	1	383	-7	2
chr4	128880013	128880014	chunk0144_123_1	38.2038	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	128880003	128880375	-61334180	+	L3	LINE	CR1	2823	3227	-872	2
chr4	128904579	128904580	chunk0144_125_1	23.165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	128904533	128904597	-61309958	-	L1PA16	LINE	L1	-159	6007	5944	2
chr4	129065571	129065572	chunk0144_126_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	129065435	129065656	-61148899	-	MER58A	DNA	hAT-Charlie	0	224	2	2
chr4	129722836	129722837	chunk0144_137_1	47.6417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	129721761	129723749	-60490806	+	L1PA14	LINE	L1	4159	6161	0	2
chr4	129839385	129839386	chunk0144_140_1	7.33982	AR_DHT_Control	chr4	129838824	129839706	-60374849	+	L1ME1	LINE	L1	5288	6330	-4	2
chr4	129850143	129850144	chunk0144_143_1	42.9437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	129849925	129850524	-60364031	-	L1PREC2	LINE	L1	-689	5476	4861	2
chr4	130473733	130473734	chunk0144_152_1	40.9437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	130473129	130474095	-59740460	-	L1M4b	LINE	L1	-1639	5367	4427	2
chr4	130635605	130635606	chunk0144_155_1	23.40076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	130635589	130635606	-59578949	+	(A)n	Simple_repeat	Simple_repeat	1	17	0	2
chr4	130751803	130751804	chunk0144_157_1	6.48643	AR_DHT_Control	chr4	130751545	130753052	-59461503	+	ERVL-B4-int	LTR	ERVL	2	1593	-4121	2
chr4	131023667	131023668	chunk0144_158_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	131023381	131023698	-59190857	+	LTR40A1	LTR	ERVL	176	498	-86	2
chr4	131071759	131071760	chunk0144_159_1	22.15144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	131070823	131071854	-59142701	+	MER92-int	LTR	ERV1	2672	3708	-1510	2
chr4	131662760	131662761	chunk0144_163_1	187.8806	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	131662603	131663106	-58551449	-	MER70A	LTR	ERVL	0	472	1	2
chr4	131712284	131712285	chunk0144_164_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	131711886	131712367	-58502188	+	LTR33A	LTR	ERVL	19	516	-4	2
chr4	131712683	131712684	chunk0144_165_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	131712567	131712767	-58501788	-	L2a	LINE	L2	-6	3420	3226	2
chr4	131822241	131822242	chunk0144_167_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	131822195	131822242	-58392313	+	GA-rich	Low_complexity	Low_complexity	1	48	0	2
chr4	132001883	132001884	chunk0144_168_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	132001712	132001904	-58212651	+	L1MA8	LINE	L1	6094	6285	-6	2
chr4	132653264	132653265	chunk0144_169_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	132652417	132654899	-57559656	-	L1MA4A	LINE	L1	-230	6775	4278	2
chr4	132919111	132919112	chunk0144_174_1	11.7357	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	132918772	132919127	-57295428	-	L1ME3B	LINE	L1	-3107	3039	2683	2
chr4	133310372	133310373	chunk0144_181_1	5.6425	AR_DHT_Control	chr4	133310229	133310491	-56904064	-	L1MA9	LINE	L1	-5707	1391	1126	2
chr4	133457833	133457834	chunk0144_185_1	39.5071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	133457384	133458110	-56756445	+	ERV3-16A3_I-int	LTR	ERVL	2295	3086	-2140	2
chr4	133507909	133507910	chunk0144_190_1	31.0162	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	133505244	133511052	-56703503	+	L1PA8A	LINE	L1	2	5840	-606	2
chr4	133666413	133666414	chunk0144_194_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	133665913	133666453	-56548102	+	L2a	LINE	L2	2873	3421	-5	2
chr4	133682303	133682304	chunk0144_195_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	133681179	133683004	-56531551	-	L1M2	LINE	L1	-4958	1891	7	2
chr4	133696095	133696096	chunk0144_196_1	35.38326	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	133696060	133697411	-56517144	+	L1PA15	LINE	L1	5607	6679	-16	2
chr4	133836525	133836526	chunk0144_199_1	64.5784	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	133836383	133836788	-56377767	-	L1MA4	LINE	L1	-1826	4320	3893	2
chr4	133887942	133887943	chunk0144_203_1	6.04605	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	133887923	133888163	-56326392	-	L2	LINE	L2	-1100	2319	2065	2
chr4	133910398	133910399	chunk0144_204_1	6.48643	AR_DHT_Control	chr4	133904966	133911020	-56303535	-	L1PBa	LINE	L1	-460	6407	2	2
chr4	133915072	133915073	chunk0144_205_1	8.03415	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	133914459	133915876	-56298679	+	L1MEd	LINE	L1	4213	5770	-353	2
chr4	134065516	134065517	chunk0144_206_1	41.8607	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	134064594	134068715	-56145840	-	L1PA15	LINE	L1	-2	6783	2588	2
chr4	134135505	134135506	chunk0144_207_1	7.42302	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	134135395	134135520	-56079035	+	L2	LINE	L2	2336	2469	-950	2
chr4	134248203	134248204	chunk0144_209_1	8.24382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	134247630	134248487	-55966068	+	L1MD2	LINE	L1	5487	6358	-1	2
chr4	134265065	134265066	chunk0144_210_1	57.6663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	134265038	134265067	-55949488	+	(TTGT)n	Simple_repeat	Simple_repeat	1	30	0	2
chr4	134451066	134451067	chunk0144_220_1	103.36003	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	134450927	134451251	-55763304	-	MER58B	DNA	hAT-Charlie	0	341	4	2
chr4	134611563	134611564	chunk0144_223_1	24.95872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	134611244	134611577	-55602978	+	MLT1A0	LTR	ERVL-MaLR	38	365	0	2
chr4	134677326	134677327	chunk0144_228_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	134677231	134677934	-55536621	-	L1PA13	LINE	L1	-717	6068	5370	2
chr4	134688012	134688013	chunk0144_229_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	134683552	134688739	-55525816	-	L1PA13	LINE	L1	-1392	5374	285	2
chr4	134780435	134780436	chunk0144_230_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	134780431	134780960	-55433595	+	LTR75B	LTR	ERVL	26	606	-2	2
chr4	135114331	135114332	chunk0144_239_1	55.77497	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135114181	135114432	-55100123	-	LTR84b	LTR	ERVL	-359	402	149	2
chr4	135175613	135175614	chunk0144_241_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135174926	135175853	-55038702	+	HERV35I-int	LTR	ERV1	3402	5109	-3935	2
chr4	135290992	135290993	chunk0144_242_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135290909	135291096	-54923459	+	MIRb	SINE	MIR	62	244	-24	2
chr4	135369153	135369154	chunk0144_245_1	12.3546	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135368963	135369505	-54845050	+	MER41A	LTR	ERV1	3	554	0	2
chr4	135457796	135457797	chunk0144_247_1	10.0392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	135457565	135457865	-54756690	+	HAL1b	LINE	L1	689	1029	-1392	2
chr4	136060925	136060926	chunk0144_248_1	90.568	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	136060830	136061245	-54153310	-	LTR108e_Mam	LTR	ERVL	-8	540	111	2
chr4	136070788	136070789	chunk0144_249_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	136070592	136071682	-54142873	+	L1PA5	LINE	L1	5060	6149	-5	2
chr4	136329141	136329142	chunk0144_251_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	136328217	136329912	-53884643	+	L1PA16	LINE	L1	32	1817	-4872	2
chr4	136452861	136452862	chunk0144_253_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	136452349	136453677	-53760878	+	L1M3c	LINE	L1	9	2517	-4520	2
chr4	136567441	136567442	chunk0144_255_1	35.5981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	136567028	136567445	-53647110	-	L1MA8	LINE	L1	-5	6286	5859	2
chr4	136731075	136731076	chunk0144_260_1	14.0688	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	136731059	136732551	-53482004	-	L1M4	LINE	L1	-388	5796	4326	2
chr4	137029726	137029727	chunk0144_263_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	137028614	137030084	-53184471	-	L1PA15	LINE	L1	-8	6157	4656	2
chr4	137154005	137154006	chunk0144_264_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	137153999	137154029	-53060526	+	(ATAAAT)n	Simple_repeat	Simple_repeat	1	31	0	2
chr4	137188113	137188114	chunk0144_265_1	11.7386	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	137187980	137188898	-53025657	-	L1MC5a	LINE	L1	-20	2757	1799	2
chr4	137632138	137632139	chunk0144_275_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	137631242	137632792	-52581763	+	L1PA13	LINE	L1	11	1596	-5189	2
chr4	137881265	137881266	chunk0144_278_1	18.33689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	137880893	137881344	-52333211	+	L1M7	LINE	L1	1232	1689	-4554	2
chr4	137901269	137901270	chunk0144_280_1	19.90059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	137901175	137901586	-52312969	-	MLT1B	LTR	ERVL-MaLR	-3	387	1	2
chr4	138071084	138071085	chunk0144_283_1	37.0332	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	138070500	138071705	-52142850	+	L1MA4A	LINE	L1	6471	7720	-2	2
chr4	138211184	138211185	chunk0144_284_1	4.06817	AR_DHT_Control	chr4	138209521	138211423	-52003132	+	L1PA16	LINE	L1	4275	6146	-20	2
chr4	138253473	138253474	chunk0144_290_1	5.12066	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	138253187	138253883	-51960672	+	L1M5	LINE	L1	3147	3838	-2302	2
chr4	138256810	138256811	chunk0144_292_1	24.62489	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	138256744	138257186	-51957369	-	LTR86C	LTR	ERVL	0	621	109	2
chr4	138535185	138535186	chunk0144_307_1	24.6212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	138531129	138535477	-51679078	+	L1ME3G	LINE	L1	1555	6875	-841	2
chr4	138574003	138574004	chunk0144_309_1	21.80262	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	138573949	138574065	-51640490	-	L1ME5	LINE	L1	-3	6191	6080	2
chr4	138822831	138822832	chunk0144_315_1	6.48643	AR_DHT_Control	chr4	138822758	138822953	-51391602	+	CR1-3_Croc	LINE	CR1	252	448	-3157	2
chr4	139085387	139085388	chunk0144_330_1	27.82647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	139085337	139085391	-51129164	+	L2a	LINE	L2	3372	3425	-1	2
chr4	139099410	139099411	chunk0144_332_1	114.2993	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	139099322	139099472	-51115083	-	L2b	LINE	L2	-2	3385	3219	2
chr4	139133345	139133346	chunk0144_337_1	9.24875	AR_DHT_Control	chr4	139133220	139133395	-51081160	-	L1ME1	LINE	L1	-630	5549	5376	2
chr4	139172220	139172221	chunk0144_338_1	7.22694	AR_DHT_Control	chr4	139171928	139172240	-51042315	+	L1ME1	LINE	L1	5449	5771	-413	2
chr4	139681777	139681778	chunk0144_353_1	20.07905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	139681740	139681909	-50532646	-	L2a	LINE	L2	-2	3424	3264	2
chr4	139696678	139696679	chunk0144_356_1	117.4842	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	139695841	139697615	-50516940	-	Tigger2	DNA	TcMar-Tigger	0	2718	909	2
chr4	139866155	139866156	chunk0144_363_1	31.81617	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	139866107	139866299	-50348256	+	MER115	DNA	hAT-Tip100	485	690	-3	2
chr4	140068746	140068747	chunk0144_381_1	5.6425	AR_DHT_Control	chr4	140068586	140068794	-50145761	+	MIR	SINE	MIR	49	262	0	2
chr4	140096718	140096719	chunk0144_385_1	61.16521	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	140096678	140096958	-50117597	+	Tigger15a	DNA	TcMar-Tigger	375	664	-51	2
chr4	140123250	140123251	chunk0144_388_1	29.8514	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	140123198	140123315	-50091240	-	L4_A_Mam	LINE	RTE-X	-2	4988	4882	2
chr4	140184247	140184248	chunk0144_394_1	7.2534	AR_DHT_Control	chr4	140184237	140184287	-50030268	-	OldhAT1	DNA	hAT-Ac	-359	2489	2436	2
chr4	140195267	140195268	chunk0144_395_1	19.6141	AR_DHT_Control	chr4	140194986	140195278	-50019277	+	L2a	LINE	L2	2	283	-3136	2
chr4	140287771	140287772	chunk0144_402_1	6.36517	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	140286940	140289047	-49925508	+	(CACATA)n	Simple_repeat	Simple_repeat	1	2209	0	2
chr4	140363617	140363618	chunk0144_409_1	8.27376	AR_DHT_Control	chr4	140363293	140365988	-49848567	+	Tigger2	DNA	TcMar-Tigger	1	2718	0	2
chr4	140450553	140450554	chunk0144_416_1	113.464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	140450530	140450592	-49763963	-	MIR	SINE	MIR	-3	259	201	2
chr4	140558075	140558076	chunk0144_419_1	131.4945	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	140557839	140558496	-49656059	+	MER49	LTR	ERV1	219	922	-1	2
chr4	140596416	140596417	chunk0144_421_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	140595545	140596622	-49617933	-	L1PB2	LINE	L1	0	6151	5037	2
chr4	140702416	140702417	chunk0144_426_1	9.21264	AR_DHT_Control	chr4	140702280	140702460	-49512095	-	MamRep605	LTR?	LTR?	-207	642	460	2
chr4	140800123	140800124	chunk0144_431_1	4.83532	AR_DHT_Control	chr4	140799558	140800157	-49414398	+	L2a	LINE	L2	2361	2953	-466	2
chr4	141023689	141023690	chunk0144_437_1	28.81122	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	141023552	141023758	-49190797	-	MER33	DNA	hAT-Charlie	-89	235	6	2
chr4	141135502	141135503	chunk0144_442_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	141135069	141136365	-49078190	+	L1MC4	LINE	L1	6461	7903	-139	2
chr4	141327383	141327384	chunk0144_445_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	141327143	141327508	-48887047	-	MLT1C	LTR	ERVL-MaLR	-38	429	6	2
chr4	141565725	141565726	chunk0144_446_1	68.7326	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	141565545	141565956	-48648599	-	Tigger3	DNA	TcMar-Tigger	-2	3027	2591	2
chr4	141830710	141830711	chunk0144_448_1	15.3769	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	141828726	141831813	-48382742	+	ERV24_Prim-int	LTR	ERV1	134	3301	-4274	2
chr4	141870353	141870354	chunk0144_449_1	20.3263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	141870284	141870989	-48343566	+	L1MEh	LINE	L1	220	983	-1252	2
chr4	141896884	141896885	chunk0144_451_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	141896442	141896933	-48317622	-	MLT2B4	LTR	ERVL	0	556	1	2
chr4	142091081	142091082	chunk0144_453_1	13.6548	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	142090752	142091155	-48123400	+	L1ME3C	LINE	L1	5685	6119	-4	2
chr4	142277423	142277424	chunk0144_459_1	31.00518	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	142277367	142277668	-47936887	+	L1PB1	LINE	L1	5464	5782	-369	2
chr4	142476411	142476412	chunk0144_462_1	22.08564	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	142475331	142477907	-47736648	+	L1PA14	LINE	L1	1506	4146	-2527	2
chr4	142589231	142589232	chunk0144_468_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	142587789	142591032	-47623523	+	L1MC3	LINE	L1	3592	6862	-923	2
chr4	142601219	142601220	chunk0144_472_1	29.793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	142597986	142601688	-47612867	+	L1PA11	LINE	L1	727	4538	-3024	2
chr4	142605962	142605963	chunk0144_473_1	25.23907	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	142603930	142606561	-47607994	+	L1MA4A	LINE	L1	3685	6303	0	2
chr4	142913223	142913224	chunk0145_5_1	235.8087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	142913127	142913531	-47301024	+	LTR108e_Mam	LTR	ERVL	75	470	-78	2
chr4	143016241	143016242	chunk0145_6_1	88.3245	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	143015715	143016404	-47198151	-	L1MA5	LINE	L1	-2756	4806	4103	2
chr4	143321281	143321282	chunk0145_9_1	64.9775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	143320951	143321476	-46893079	-	L1ME1	LINE	L1	-279	6165	5579	2
chr4	143408449	143408450	chunk0145_19_1	8.06501	AR_DHT_Control	chr4	143408389	143408676	-46805879	-	L1ME3G	LINE	L1	-147	777	481	2
chr4	143412483	143412484	chunk0145_20_1	18.64721	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	143412454	143412789	-46801766	-	L2c	LINE	L2	-19	3368	3022	2
chr4	143507487	143507488	chunk0145_25_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	143507371	143509178	-46705377	-	L1MD	LINE	L1	-2018	4128	2269	2
chr4	144106324	144106325	chunk0145_37_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	144105673	144106683	-46107872	-	LTR78	LTR	ERV1	-13	1291	210	2
chr4	144837408	144837409	chunk0145_46_1	10.1791	AR_DHT_Control	chr4	144836726	144842477	-45372078	+	L1PA6	LINE	L1	175	5956	-371	2
chr4	144995959	144995960	chunk0145_47_1	43.7418	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	144995939	144996586	-45217969	+	L1M2a1	LINE	L1	5	645	-6471	2
chr4	145228526	145228527	chunk0145_57_1	7.36432	AR_DHT_Control	chr4	145223100	145228630	-44985925	-	L1PA6	LINE	L1	-6	6148	606	2
chr4	145343509	145343510	chunk0145_61_1	17.96245	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	145343111	145344058	-44870497	+	L1MCa	LINE	L1	1	977	-5774	2
chr4	145566802	145566803	chunk0145_65_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	145565721	145567026	-44647529	+	L1PREC2	LINE	L1	1	1259	-5526	2
chr4	145965701	145965702	chunk0145_94_1	54.24585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	145962412	145968142	-44246413	-	L1PA7	LINE	L1	0	6469	722	2
chr4	145974342	145974343	chunk0145_96_1	7.42302	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	145972325	145974966	-44239589	+	L1MD1	LINE	L1	2767	5439	-1098	2
chr4	146020715	146020716	chunk0145_98_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	146019509	146024098	-44190457	-	L1MA3	LINE	L1	-2875	4690	20	2
chr4	146047645	146047646	chunk0145_102_1	108.3955	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	146042271	146048439	-44166116	-	L1PA6	LINE	L1	-10	6144	1	2
chr4	146158545	146158546	chunk0145_106_1	13.1449	AR_DHT_Control	chr4	146157905	146158911	-44055644	+	Tigger2	DNA	TcMar-Tigger	1492	2526	-192	2
chr4	146276402	146276403	chunk0145_116_1	48.2656	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	146275591	146276429	-43938126	-	LTR82A	LTR	ERVL	-3	869	16	2
chr4	146319290	146319291	chunk0145_117_1	31.4066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	146318429	146319663	-43894892	+	L2a	LINE	L2	2107	3426	0	2
chr4	146365787	146365788	chunk0145_122_1	46.25683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	146365701	146365820	-43848735	+	MIRb	SINE	MIR	11	134	-134	2
chr4	146377052	146377053	chunk0145_127_1	9.51255	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	146376648	146377238	-43837317	-	LTR10C	LTR	ERV1	0	591	1	2
chr4	146377789	146377790	chunk0145_128_1	16.14388	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	146377749	146377852	-43836703	+	L2a	LINE	L2	3308	3421	-5	2
chr4	146383442	146383443	chunk0145_133_1	9.39982	AR_DHT_Control	chr4	146383274	146383687	-43830868	+	MER51B	LTR	ERV1	1	377	0	2
chr4	147022684	147022685	chunk0145_144_1	10.6083	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	147021602	147023465	-43191090	-	L1PREC2	LINE	L1	-3	6169	4218	2
chr4	147029388	147029389	chunk0145_145_1	71.41702	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	147028978	147029428	-43185127	-	MamRTE1	LINE	RTE-BovB	-868	2944	2455	2
chr4	147049296	147049297	chunk0145_147_1	9.06199	AR_DHT_Control	chr4	147048775	147049306	-43165249	+	L2a	LINE	L2	2932	3424	-2	2
chr4	147117515	147117516	chunk0145_156_1	268.1848	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr4	147117486	147117699	-43096856	-	LFSINE_Vert	SINE	tRNA	-12	447	224	2
chr4	147147723	147147724	chunk0145_159_1	7.36432	AR_DHT_Control	chr4	147147420	147148551	-43066004	-	L1MC4	LINE	L1	-265	7777	6451	2
chr4	147274475	147274476	chunk0145_167_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	147270974	147275605	-42938950	-	L1MA8	LINE	L1	-2828	4734	460	2
chr4	147292839	147292840	chunk0145_170_1	23.4743	AR_DHT_Control	chr4	147292169	147298625	-42915930	+	L1PA7	LINE	L1	1	6469	0	2
chr4	147371063	147371064	chunk0145_173_1	14.2141	AR_DHT_Control	chr4	147371020	147371364	-42843191	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	2
chr4	147637024	147637025	chunk0145_178_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	147635722	147637645	-42576910	+	L1MA9	LINE	L1	4222	6203	-109	2
chr4	147760214	147760215	chunk0145_183_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	147760202	147760443	-42454112	-	MIRc	SINE	MIR	-10	258	33	2
chr4	147805285	147805286	chunk0145_188_1	8.02791	AR_DHT_Control	chr4	147804000	147805597	-42408958	-	L1PA15	LINE	L1	-7	6158	4526	2
chr4	147824881	147824882	chunk0145_191_1	7.88662	AR_DHT_Control	chr4	147824853	147825037	-42389518	-	MIR	SINE	MIR	-35	227	40	2
chr4	147882896	147882897	chunk0145_197_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	147882885	147883243	-42331312	+	Tigger11a	DNA	TcMar-Tigger	1	352	-383	2
chr4	147930121	147930122	chunk0145_205_1	19.2055	AR_DHT_Control	chr4	147930080	147930146	-42284409	-	L2b	LINE	L2	0	3375	3311	2
chr4	147991802	147991803	chunk0145_211_1	126.6875	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	147991218	147991812	-42222743	-	MER68B	LTR	ERVL	0	564	2	2
chr4	148007583	148007584	chunk0145_213_1	27.02067	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	148007543	148008309	-42206246	-	L3	LINE	CR1	-41	4058	3218	2
chr4	148056004	148056005	chunk0145_220_1	75.8489	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	148055978	148056173	-42158382	+	MER58A	DNA	hAT-Charlie	1	220	-4	2
chr4	148245231	148245232	chunk0145_222_1	12.4503	AR_DHT_Control	chr4	148245196	148245350	-41969205	-	MIRb	SINE	MIR	-8	260	86	2
chr4	148302605	148302606	chunk0145_226_1	5.55081	AR_DHT_Control	chr4	148301380	148302726	-41911829	+	MER61-int	LTR	ERV1	1978	3355	-1862	2
chr4	148598615	148598616	chunk0145_238_1	69.65127	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	148596584	148599436	-41615119	-	L1PA5	LINE	L1	-3315	3004	174	2
chr4	148778331	148778332	chunk0145_246_1	12.8015	AR_DHT_Control	chr4	148778260	148778624	-41435931	-	Tigger3b	DNA	TcMar-Tigger	0	1231	890	2
chr4	148779456	148779457	chunk0145_247_1	9.39486	AR_DHT_Control	chr4	148779387	148779629	-41434926	-	LTR16D	LTR	ERVL	-3	648	369	2
chr4	148823683	148823684	chunk0145_250_1	13.72725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	148823581	148823897	-41390658	+	L1ME3G	LINE	L1	428	686	-238	2
chr4	148874418	148874419	chunk0145_253_1	20.76868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	148874408	148874890	-41339665	-	LTR33	LTR	ERVL	-3	512	1	2
chr4	148978639	148978640	chunk0145_264_1	34.3888	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	148978600	148978771	-41235784	-	MIR	SINE	MIR	-20	242	43	2
chr4	149025746	149025747	chunk0145_266_1	7.80475	AR_DHT_Control	chr4	149025501	149026145	-41188410	+	MLT2F	LTR	ERVL	18	644	-19	2
chr4	149141056	149141057	chunk0145_269_1	48.8978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149140996	149141121	-41073434	+	L2b	LINE	L2	3243	3373	-2	2
chr4	149435455	149435456	chunk0145_272_1	20.62836	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149435286	149436256	-40778299	+	Tigger3b	DNA	TcMar-Tigger	2	1038	-193	2
chr4	149618547	149618548	chunk0145_278_1	15.31521	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149617601	149619107	-40595448	+	L1PB4	LINE	L1	4236	5789	-367	2
chr4	149717015	149717016	chunk0145_281_1	9.21264	AR_DHT_Control	chr4	149716838	149717458	-40497097	+	MER21B	LTR	ERVL	216	862	-6	2
chr4	149736843	149736844	chunk0145_282_1	39.5838	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	149736616	149737528	-40477027	+	L1ME2z	LINE	L1	5419	6435	-9	2
chr4	149749914	149749915	chunk0145_285_1	5.21805	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149749868	149749984	-40464571	+	L2b	LINE	L2	3253	3367	-8	2
chr4	149859235	149859236	chunk0145_287_1	62.1417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149857885	149859301	-40355254	+	L1MA4	LINE	L1	1244	2708	-4857	2
chr4	149901232	149901233	chunk0145_289_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149901183	149901298	-40313257	+	MIRb	SINE	MIR	25	159	-109	2
chr4	149995961	149995962	chunk0145_292_1	10.5524	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	149995568	149995963	-40218592	+	MSTA	LTR	ERVL-MaLR	1	428	0	2
chr4	150024604	150024605	chunk0145_297_1	66.3821	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150024156	150024802	-40189753	+	MER21B	LTR	ERVL	5	614	-254	2
chr4	150112256	150112257	chunk0145_302_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150110486	150112830	-40101725	-	L1PB3	LINE	L1	0	6923	4558	2
chr4	150372875	150372876	chunk0145_307_1	5.6425	AR_DHT_Control	chr4	150372783	150373124	-39841431	+	MLT1F	LTR	ERVL-MaLR	1	401	-147	2
chr4	150519409	150519410	chunk0145_315_1	11.1716	AR_DHT_Control	chr4	150519216	150520139	-39694416	-	L1ME2	LINE	L1	-2	6162	5185	2
chr4	150537471	150537472	chunk0145_316_1	19.18585	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150536719	150537668	-39676887	+	L1PA16	LINE	L1	4360	5330	-816	2
chr4	150644585	150644586	chunk0145_319_1	59.2018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	150643742	150646109	-39568446	+	Cheshire	DNA	hAT-Charlie	47	2420	0	3
chr4	150665315	150665316	chunk0145_322_1	86.441	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	150664933	150665480	-39549075	-	MER68	LTR	ERVL	0	563	3	3
chr4	150714961	150714962	chunk0145_326_1	115.6445	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150714881	150714987	-39499568	+	MER110	LTR	ERV1	80	160	-308	3
chr4	150723035	150723036	chunk0145_329_1	155.5925	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150722628	150724765	-39489790	+	L1MA5	LINE	L1	9	2277	-5283	3
chr4	150725657	150725658	chunk0145_331_1	10.89813	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150724904	150726467	-39488088	+	L1MA5	LINE	L1	2283	3877	-3688	3
chr4	150772176	150772177	chunk0145_333_1	32.731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150770627	150772922	-39441633	-	ERVL-B4-int	LTR	ERVL	-351	5363	2876	3
chr4	150910218	150910219	chunk0145_337_1	6.231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150909112	150912185	-39302370	-	L1MB2	LINE	L1	0	6171	3162	3
chr4	150912774	150912775	chunk0145_338_1	47.1882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	150912689	150913185	-39301370	-	L1MB2	LINE	L1	-2979	3161	2684	3
chr4	150914033	150914034	chunk0145_340_1	7.80833	AR_DHT_Control	chr4	150913874	150914128	-39300427	-	L1MA1	LINE	L1	-8	6294	6025	3
chr4	150961933	150961934	chunk0145_341_1	31.39335	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	150961837	150962067	-39252488	-	MIR	SINE	MIR	0	262	9	3
chr4	151022778	151022779	chunk0145_347_1	74.066	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	151022682	151022844	-39191711	+	L1M5	LINE	L1	5387	5577	-547	3
chr4	151122743	151122744	chunk0145_350_1	17.6003	AR_DHT_Control	chr4	151122737	151122847	-39091708	-	MIR	SINE	MIR	-22	240	132	3
chr4	151284746	151284747	chunk0145_360_1	48.06165	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	151283881	151285254	-38929301	-	L1MEf	LINE	L1	-4779	1421	47	3
chr4	151305891	151305892	chunk0145_362_1	40.6681	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	151305472	151306284	-38908271	+	L1ME1	LINE	L1	5802	6649	-28	3
chr4	151339855	151339856	chunk0145_364_1	15.54852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	151339778	151339937	-38874618	+	L2b	LINE	L2	3201	3375	0	3
chr4	151450569	151450570	chunk0145_367_1	60.8822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	151450267	151450763	-38763792	-	L1ME3G	LINE	L1	-225	699	165	3
chr4	151519645	151519646	chunk0145_372_1	38.00179	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	151518973	151520436	-38694119	-	L1ME2z	LINE	L1	-170	6274	4777	3
chr4	151535747	151535748	chunk0145_373_1	20.2039	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	151535651	151535774	-38678781	+	L2a	LINE	L2	3283	3426	0	3
chr4	152289033	152289034	chunk0145_391_1	17.98	AR_DHT_Control	chr4	152288976	152289048	-37925507	+	MIR	SINE	MIR	124	198	-64	3
chr4	152487281	152487282	chunk0145_394_1	9.76623	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	152487013	152487372	-37727183	+	L1MC4	LINE	L1	7009	7400	-642	3
chr4	152565567	152565568	chunk0145_397_1	54.97017	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	152565517	152565675	-37648880	+	L1M5	LINE	L1	4586	4743	-1403	3
chr4	152822581	152822582	chunk0145_409_1	166.8299	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	152820799	152823498	-37391057	+	L1PB3	LINE	L1	1435	4283	-2579	3
chr4	152832143	152832144	chunk0145_413_1	43.37057	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	152831946	152832836	-37381719	-	L1ME3	LINE	L1	-332	5830	4889	3
chr4	152931000	152931001	chunk0145_414_1	7.36432	AR_DHT_Control	chr4	152930998	152931025	-37283530	+	(TC)n	Simple_repeat	Simple_repeat	1	27	0	3
chr4	153002263	153002264	chunk0145_425_1	151.1275	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153002205	153002271	-37212284	+	L2c	LINE	L2	3245	3318	-69	3
chr4	153014424	153014425	chunk0145_427_1	26.7491	AR_DHT_Control	chr4	153014331	153014501	-37200054	-	L1ME4c	LINE	L1	-178	652	483	3
chr4	153058872	153058873	chunk0145_429_1	11.9502	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153058859	153058991	-37155564	-	MER53	DNA	hAT	0	193	64	3
chr4	153277232	153277233	chunk0145_434_1	28.9054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	153277114	153277557	-36936998	+	L2a	LINE	L2	2941	3422	-4	3
chr4	153340633	153340634	chunk0145_435_1	6.0927	AR_DHT_Control	chr4	153340560	153340654	-36873901	-	L2c	LINE	L2	-41	3346	3244	3
chr4	153358895	153358896	chunk0145_436_1	29.46084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153358870	153359779	-36854776	-	L1MC2	LINE	L1	-10	6334	5397	3
chr4	153486583	153486584	chunk0145_442_1	81.1215	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153486407	153486617	-36727938	-	MLT1L	LTR	ERVL-MaLR	-8	602	390	3
chr4	153613095	153613096	chunk0145_449_1	26.1262	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153612802	153613869	-36600686	+	HAL1b	LINE	L1	1230	2378	-43	3
chr4	153632426	153632427	chunk0145_450_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	153632304	153632489	-36582066	+	L2a	LINE	L2	3181	3422	-4	3
chr4	153838699	153838700	chunk0145_454_1	20.74243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	153838698	153838907	-36375648	+	MIR	SINE	MIR	13	243	-19	3
chr4	154331169	154331170	chunk0145_459_1	9.34168	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	154331155	154331295	-35883260	-	MIRc	SINE	MIR	-27	241	86	3
chr4	154543948	154543949	chunk0146_1_1	7.36432	AR_DHT_Control	chr4	154543943	154544036	-35670519	-	U6	snRNA	snRNA	-11	96	2	3
chr4	154837074	154837075	chunk0146_4_1	14.8182	AR_DHT_Control	chr4	154836867	154838460	-35376095	-	HERVK22-int	LTR	ERVK	-1758	5079	3471	3
chr4	154890873	154890874	chunk0146_6_1	87.20927	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	154890813	154891148	-35323407	+	LTR16C	LTR	ERVL	78	535	-3	3
chr4	154959257	154959258	chunk0146_8_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	154958964	154959461	-35255094	-	L1ME1	LINE	L1	-5872	768	41	3
chr4	155042177	155042178	chunk0146_15_1	101.27014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	155041989	155042730	-35171825	-	L1M5	LINE	L1	-317	5806	5054	3
chr4	155055741	155055742	chunk0146_16_1	50.431	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	155054623	155056165	-35158390	+	L1MB7	LINE	L1	4811	6356	-1	3
chr4	155066501	155066502	chunk0146_19_1	64.1203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	155065948	155066573	-35147982	-	L1ME3	LINE	L1	-1810	5427	4789	3
chr4	155304699	155304700	chunk0146_26_1	6.0927	AR_DHT_Control	chr4	155304634	155304733	-34909822	-	MLT1H2	LTR	ERVL-MaLR	-4	485	379	3
chr4	155306209	155306210	chunk0146_27_1	14.6406	AR_DHT_Control	chr4	155306195	155306235	-34908320	+	MIR3	SINE	MIR	108	149	-59	3
chr4	155379905	155379906	chunk0146_28_1	116.2016	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	155379842	155379961	-34834594	+	L2a	LINE	L2	3302	3426	0	3
chr4	155400789	155400790	chunk0146_31_1	22.3951	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	155400761	155400805	-34813750	+	A-rich	Low_complexity	Low_complexity	1	46	0	3
chr4	155506095	155506096	chunk0146_42_1	28.79591	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	155505737	155506422	-34708133	-	MER4A	LTR	ERV1	-4	660	1	3
chr4	155674693	155674694	chunk0146_51_1	19.62539	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	155674498	155675118	-34539437	-	Tigger3b	DNA	TcMar-Tigger	-603	628	3	3
chr4	155679579	155679580	chunk0146_55_1	13.9303	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	155679298	155679725	-34534830	-	MSTB1	LTR	ERVL-MaLR	0	432	1	3
chr4	155778599	155778600	chunk0146_60_1	41.194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	155778369	155778722	-34435833	+	UCON2	DNA?	DNA?	87	438	-147	3
chr4	156443907	156443908	chunk0146_65_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	156443643	156443931	-33770624	+	AluSp	SINE	Alu	1	289	-24	3
chr4	156713863	156713864	chunk0146_66_1	29.9971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	156713823	156713999	-33500556	-	MIRc	SINE	MIR	-9	259	57	3
chr4	157052491	157052492	chunk0146_70_1	42.89226	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	157052258	157052869	-33161686	-	MLT2F	LTR	ERVL	-11	652	1	3
chr4	157997491	157997492	chunk0146_80_1	7.46309	AR_DHT_Control	chr4	157997394	157997728	-32216827	-	L2	LINE	L2	-1119	2300	1957	3
chr4	158039828	158039829	chunk0146_83_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	158038414	158043639	-32170916	+	L1PA16	LINE	L1	1542	6860	-9	3
chr4	158380874	158380875	chunk0146_98_1	7.5528	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	158380836	158380918	-31833637	-	L2a	LINE	L2	-1	3425	3342	3
chr4	158820074	158820075	chunk0146_108_1	5.08049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	158820069	158820116	-31394439	+	(GTTTTT)n	Simple_repeat	Simple_repeat	1	47	0	3
chr4	158861117	158861118	chunk0146_117_1	55.5909	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	158861049	158861210	-31353345	-	MER58A	DNA	hAT-Charlie	-67	157	1	3
chr4	158888501	158888502	chunk0146_118_1	7.36432	AR_DHT_Control	chr4	158888415	158888503	-31326052	-	L2c	LINE	L2	-5	3382	3294	3
chr4	158998056	158998057	chunk0146_119_1	44.8052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	158997983	158998298	-31216257	-	MER58B	DNA	hAT-Charlie	0	341	1	3
chr4	159013953	159013954	chunk0146_121_1	157.5239	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	159013743	159014109	-31200446	+	L1MB3	LINE	L1	5786	6163	-20	3
chr4	159119700	159119701	chunk0146_126_1	7.36432	AR_DHT_Control	chr4	159119615	159119718	-31094837	+	MIRb	SINE	MIR	35	162	-106	3
chr4	159196632	159196633	chunk0146_134_1	42.94111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	159196546	159196690	-31017865	+	MIR	SINE	MIR	111	255	-7	3
chr4	159293411	159293412	chunk0146_137_1	5.6425	AR_DHT_Control	chr4	159293300	159293463	-30921092	+	L2a	LINE	L2	3235	3416	-10	3
chr4	159638467	159638468	chunk0146_148_1	15.0924	AR_DHT_Control	chr4	159638417	159638469	-30576086	-	MER31B	LTR	ERV1	-423	43	1	3
chr4	159669829	159669830	chunk0146_150_1	32.2732	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	159669736	159670685	-30543870	-	L1M7	LINE	L1	-586	5656	4670	3
chr4	159723426	159723427	chunk0146_151_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	159722046	159723699	-30490856	-	MER52A	LTR	ERV1	0	1755	1	3
chr4	160037957	160037958	chunk0146_163_1	40.02157	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	160036822	160038434	-30176121	+	L1MB1	LINE	L1	4492	6168	0	3
chr4	160224025	160224026	chunk0146_166_1	77.64802	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	160222658	160225147	-29989408	-	L1PA16	LINE	L1	-4436	2417	1	3
chr4	160252446	160252447	chunk0146_170_1	4.73293	AR_DHT_Control	chr4	160252392	160252538	-29962017	+	L2	LINE	L2	2820	2967	-452	3
chr4	160319077	160319078	chunk0146_171_1	20.5159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	160318481	160319969	-29894586	-	ERVL-B4-int	LTR	ERVL	-3984	1730	123	3
chr4	160459322	160459323	chunk0146_173_1	8.02791	AR_DHT_Control	chr4	160459199	160459352	-29755203	+	L2a	LINE	L2	3225	3417	-9	3
chr4	160496391	160496392	chunk0146_174_1	64.2624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	160496191	160496736	-29717819	+	L1MEd	LINE	L1	1080	1994	-662	3
chr4	160690656	160690657	chunk0146_176_1	52.0472	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	160689845	160692559	-29521996	+	L1PA15	LINE	L1	3479	6226	-559	3
chr4	160756048	160756049	chunk0146_179_1	34.4367	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	160754499	160756914	-29457641	-	ERV3-16A3_I-int	LTR	ERVL	-2544	2682	246	3
chr4	160770730	160770731	chunk0146_181_1	18.6332	AR_DHT_Control	chr4	160770700	160770862	-29443693	+	L2c	LINE	L2	2994	3157	-230	3
chr4	160806693	160806694	chunk0146_182_1	8.27376	AR_DHT_Control	chr4	160806693	160806823	-29407732	-	L2c	LINE	L2	-326	3061	2926	3
chr4	160827897	160827898	chunk0146_183_1	150.9959	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	160827642	160827986	-29386569	+	L2a	LINE	L2	3076	3426	0	3
chr4	160878250	160878251	chunk0146_185_1	7.36432	AR_DHT_Control	chr4	160878249	160878904	-29335651	+	L1MC1	LINE	L1	5663	6332	-1	3
chr4	161021467	161021468	chunk0146_187_1	62.25329	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	161020774	161022109	-29192446	+	L1M2	LINE	L1	3529	4781	-2778	3
chr4	161111903	161111904	chunk0146_189_1	17.4629	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	161111881	161112166	-29102389	-	L1MB1	LINE	L1	-12	6177	5814	3
chr4	161246358	161246359	chunk0146_193_1	14.79924	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	161245995	161246606	-28967949	+	Charlie29a	DNA	hAT-Charlie	118	719	0	3
chr4	161248091	161248092	chunk0146_194_1	6.86162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	161247228	161248894	-28965661	+	L1M4	LINE	L1	19	1696	-5821	3
chr4	161288161	161288162	chunk0146_195_1	6.48643	AR_DHT_Control	chr4	161287766	161288384	-28926171	+	L1MC1	LINE	L1	450	1009	-5499	3
chr4	161356665	161356666	chunk0146_200_1	11.3519	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	161356613	161356765	-28857790	+	L2c	LINE	L2	3183	3336	-51	3
chr4	161399795	161399796	chunk0146_206_1	31.3438	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	161399182	161400213	-28814342	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	1	3
chr4	161539399	161539400	chunk0146_211_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	161539390	161539426	-28675129	+	(GGATGT)n	Simple_repeat	Simple_repeat	1	37	0	3
chr4	161643951	161643952	chunk0146_213_1	26.3238	AR_DHT_Control	chr4	161643931	161644042	-28570513	-	L2c	LINE	L2	-7	3380	3272	3
chr4	161799817	161799818	chunk0146_217_1	39.5703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	161799675	161799851	-28414704	-	MIR	SINE	MIR	-63	199	15	3
chr4	162078249	162078250	chunk0146_228_1	38.1177	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	162078026	162078759	-28135796	+	ERVL-E-int	LTR	ERVL	4158	4919	-748	3
chr4	162115604	162115605	chunk0146_230_1	99.2966	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	162115448	162115644	-28098911	+	UCON24	Unknown	Unknown	167	370	-4	3
chr4	162239094	162239095	chunk0146_236_1	7.43227	AR_DHT_Control	chr4	162239047	162239673	-27974882	+	L1PA8	LINE	L1	5543	6170	-2	3
chr4	162242041	162242042	chunk0146_237_1	41.529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	162241986	162242192	-27972363	+	MIRb	SINE	MIR	39	249	-19	3
chr4	162274486	162274487	chunk0146_240_1	23.93254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	162274262	162274836	-27939719	-	MLT1E3	LTR	ERVL-MaLR	0	624	1	3
chr4	162283245	162283246	chunk0146_242_1	18.72895	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	162283116	162283714	-27930841	-	L1ME1	LINE	L1	-405	5779	5152	3
chr4	162318209	162318210	chunk0146_245_1	12.52551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	162317449	162318465	-27896090	-	L1P4b	LINE	L1	-6352	982	17	3
chr4	162422353	162422354	chunk0146_246_1	11.1716	AR_DHT_Control	chr4	162422046	162422663	-27791892	-	L1ME2	LINE	L1	-7	6157	5442	3
chr4	162457137	162457138	chunk0146_247_1	6.94032	AR_DHT_Control	chr4	162456936	162458128	-27756427	-	Tigger3b	DNA	TcMar-Tigger	-12	1219	1	3
chr4	162457757	162457758	chunk0146_248_1	16.48268	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	162456936	162458128	-27756427	-	Tigger3b	DNA	TcMar-Tigger	-12	1219	1	3
chr4	162502274	162502275	chunk0146_250_1	139.9689	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	162502205	162502793	-27711762	-	L1MC	LINE	L1	-1271	4875	4268	3
chr4	162679848	162679849	chunk0146_254_1	5.99997	AR_DHT_Control	chr4	162677293	162679968	-27534587	+	L1P4d	LINE	L1	2894	5450	-1465	3
chr4	162723393	162723394	chunk0146_258_1	39.8061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	162723096	162723516	-27491039	-	L3	LINE	CR1	-1334	2765	2305	3
chr4	162783531	162783532	chunk0146_261_1	10.186	AR_DHT_Control	chr4	162783360	162784362	-27430193	-	ERVL-E-int	LTR	ERVL	-2583	3084	2089	3
chr4	163101359	163101360	chunk0146_268_1	27.3042	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	163101343	163102528	-27112027	-	HERVH-int	LTR	ERV1	-2564	5149	3962	3
chr4	164008223	164008224	chunk0146_285_1	10.4518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	164007689	164010062	-26204493	+	L1M1	LINE	L1	3288	5679	-1883	3
chr4	164872623	164872624	chunk0146_296_1	23.52983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	164872590	164872676	-25341879	+	L2b	LINE	L2	3289	3366	-9	3
chr4	165070914	165070915	chunk0146_301_1	42.44332	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	165070834	165070965	-25143590	-	L2a	LINE	L2	-3	3423	3273	3
chr4	165182747	165182748	chunk0146_304_1	42.9099	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	165181832	165182926	-25031629	+	L1ME3G	LINE	L1	55	778	-146	3
chr4	165369757	165369758	chunk0146_313_1	74.5169	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	165369626	165372589	-24841966	-	L1MB1	LINE	L1	-37	6717	3522	3
chr4	165463714	165463715	chunk0146_320_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	165463582	165463817	-24750738	+	MIRb	SINE	MIR	20	261	-1	3
chr4	165686801	165686802	chunk0146_325_1	5.80784	Merged_Lncap_AR_Veh	chr4	165686702	165686933	-24527622	+	MIRb	SINE	MIR	22	262	-6	3
chr4	166265202	166265203	chunk0146_346_1	10.1791	AR_DHT_Control	chr4	166265018	166265571	-23948984	-	L1MA6	LINE	L1	-5	6295	5759	3
chr4	166282237	166282238	chunk0146_348_1	62.83543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	166281950	166282321	-23932234	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr4	167265350	167265351	chunk0146_356_1	62.00387	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	167264680	167265918	-22948637	-	L1MC2	LINE	L1	-30	6314	5042	3
chr4	168256442	168256443	chunk0146_364_1	136.6438	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	168255962	168256722	-21957833	+	LTR68	LTR	ERV1	1	739	-1	3
chr4	168305136	168305137	chunk0146_368_1	19.3006	AR_DHT_Control	chr4	168304722	168305292	-21909263	+	Tigger3b	DNA	TcMar-Tigger	627	1230	-1	3
chr4	168309204	168309205	chunk0146_369_1	36.9601	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	168308784	168310385	-21904170	+	Tigger2	DNA	TcMar-Tigger	61	1774	-944	3
chr4	168339901	168339902	chunk0146_371_1	47.4214	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	168339285	168340254	-21874301	-	L1MC1	LINE	L1	0	6333	5329	3
chr4	168355879	168355880	chunk0146_373_1	6.6833	AR_DHT_Control	chr4	168355517	168356151	-21858404	-	L1MCa	LINE	L1	-5819	689	1	3
chr4	168364762	168364763	chunk0146_374_1	7.36432	AR_DHT_Control	chr4	168364679	168366902	-21847653	+	L1MA6	LINE	L1	4064	6310	-1252	3
chr4	168441205	168441206	chunk0146_378_1	18.56422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	168440828	168441211	-21773344	+	L1ME3	LINE	L1	5777	6158	-4	3
chr4	168469067	168469068	chunk0146_380_1	27.93087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	168468192	168469597	-21744958	+	L1ME2z	LINE	L1	3690	5198	-948	3
chr4	168501537	168501538	chunk0146_381_1	58.7512	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	168501480	168501556	-21712999	-	Tigger19b	DNA	TcMar-Tigger	-479	71	4	3
chr4	168931897	168931898	chunk0146_405_1	8.27376	AR_DHT_Control	chr4	168930522	168934109	-21280446	+	L1M2c	LINE	L1	780	4403	-3162	3
chr4	169070983	169070984	chunk0146_412_1	42.94832	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	169070855	169071251	-21143304	+	MER57B2	LTR	ERV1	1	403	0	3
chr4	169360201	169360202	chunk0146_428_1	130.867	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	169359951	169361402	-20853153	-	L1M1	LINE	L1	-4278	3287	1762	3
chr4	169449330	169449331	chunk0146_432_1	23.347	AR_DHT_Control	chr4	169448685	169453420	-20761135	+	L1PA6	LINE	L1	177	4921	-1398	3
chr4	169484876	169484877	chunk0146_433_1	6.59306	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	169484719	169484918	-20729637	+	MIRb	SINE	MIR	27	239	-29	3
chr4	169509118	169509119	chunk0146_434_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	169509113	169509144	-20705411	+	(TTTG)n	Simple_repeat	Simple_repeat	1	31	0	3
chr4	169593263	169593264	chunk0146_436_1	24.9079	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	169593180	169593389	-20621166	-	MER58A	DNA	hAT-Charlie	0	224	4	3
chr4	169606373	169606374	chunk0146_438_1	79.06261	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	169606317	169606754	-20607801	+	HAL1	LINE	L1	94	582	-1925	3
chr4	169767698	169767699	chunk0146_439_1	10.6535	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	169767621	169767863	-20446692	-	L1M5	LINE	L1	-303	5821	5575	3
chr4	169869602	169869603	chunk0146_445_1	23.43461	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	169869493	169869641	-20344914	+	MER103C	DNA	hAT-Charlie	73	220	-77	3
chr4	169941915	169941916	chunk0146_448_1	49.4052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	169941722	169941916	-20272639	+	LTR26C	LTR	ERV1	348	536	-3	3
chr4	170080695	170080696	chunk0146_450_1	281.2851	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	170080090	170081723	-20132832	+	L1MA4	LINE	L1	1238	3183	-4383	3
chr4	170083189	170083190	chunk0146_451_1	31.278	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	170081889	170083482	-20131073	+	L1MA4	LINE	L1	2881	4507	-3055	3
chr4	170104097	170104098	chunk0146_454_1	6.48643	AR_DHT_Control	chr4	170102873	170105808	-20108747	+	L1M1	LINE	L1	3005	5929	-1636	3
chr4	170527225	170527226	chunk0147_7_1	19.60753	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	170527151	170527379	-19687176	+	L1MA10	LINE	L1	5948	6311	-23	3
chr4	170599641	170599642	chunk0147_9_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	170599571	170599683	-19614872	-	L1M5	LINE	L1	-533	5709	5598	3
chr4	170657917	170657918	chunk0147_10_1	119.35	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	170657393	170658340	-19556215	-	MER63C	DNA	hAT-Blackjack	-6	924	1	3
chr4	170668589	170668590	chunk0147_11_1	6.79294	AR_DHT_Control	chr4	170667868	170669249	-19545306	-	L1MC1	LINE	L1	-1	6332	4934	3
chr4	170673082	170673083	chunk0147_13_1	38.1114	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	170672911	170673090	-19541465	-	MER53	DNA	hAT	0	193	12	3
chr4	170721281	170721282	chunk0147_16_1	15.82194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	170720811	170722375	-19492180	+	L1PA15	LINE	L1	4641	6164	-1	3
chr4	171242770	171242771	chunk0147_21_1	33.879	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	171240375	171242891	-18971664	+	L1MD1	LINE	L1	3888	6624	-9	3
chr4	171308857	171308858	chunk0147_22_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	171307632	171309505	-18905050	-	L1MC3	LINE	L1	-783	7002	5079	3
chr4	171576873	171576874	chunk0147_23_1	7.36432	AR_DHT_Control	chr4	171576667	171577270	-18637285	-	MER34B-int	LTR	ERV1	-316	5040	4211	3
chr4	171619193	171619194	chunk0147_27_1	30.4786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	171617871	171619737	-18594818	-	L1PB4	LINE	L1	-3	6153	4260	3
chr4	171647446	171647447	chunk0147_28_1	81.22489	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	171647150	171647526	-18567029	-	MER70B	LTR	ERVL	-146	432	17	3
chr4	171683343	171683344	chunk0147_31_1	28.6882	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	171683232	171683405	-18531150	-	MIR	SINE	MIR	-2	266	72	3
chr4	172024822	172024823	chunk0147_37_1	36.29177	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	172024793	172024873	-18189682	+	(CTTC)n	Simple_repeat	Simple_repeat	1	81	0	3
chr4	172045887	172045888	chunk0147_39_1	50.438	AR_DHT_Control	chr4	172045796	172046308	-18168247	-	L1MB1	LINE	L1	-116	6052	5594	3
chr4	172188616	172188617	chunk0147_43_1	54.54164	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	172188396	172188926	-18025629	-	L2b	LINE	L2	0	3426	2926	3
chr4	172344689	172344690	chunk0147_46_1	34.765	AR_DHT_Control	chr4	172344662	172344889	-17869666	+	L2c	LINE	L2	3106	3348	-39	3
chr4	172629119	172629120	chunk0147_60_1	143.4029	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	172629114	172629183	-17585372	+	(TG)n	Simple_repeat	Simple_repeat	1	71	0	3
chr4	172712754	172712755	chunk0147_64_1	9.58976	AR_DHT_Control	chr4	172712694	172712779	-17501776	+	MIR	SINE	MIR	166	251	-11	3
chr4	172829052	172829053	chunk0147_68_1	6.01382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	172828850	172829110	-17385445	-	MLT1C	LTR	ERVL-MaLR	-5	462	191	3
chr4	173159820	173159821	chunk0147_82_1	20.4889	AR_DHT_Control	chr4	173159509	173160247	-17054308	+	L2a	LINE	L2	2633	3418	-8	3
chr4	173239434	173239435	chunk0147_90_1	23.12724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	173239353	173239494	-16975061	-	L2c	LINE	L2	0	3387	3252	3
chr4	173243990	173243991	chunk0147_91_1	7.33982	AR_DHT_Control	chr4	173243935	173244058	-16970497	-	L2b	LINE	L2	0	3375	3246	3
chr4	173278618	173278619	chunk0147_93_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	173277689	173278870	-16935685	+	L3	LINE	CR1	2298	3671	-428	3
chr4	173380256	173380257	chunk0147_98_1	6.48643	AR_DHT_Control	chr4	173379784	173383574	-16830981	-	L1MB5	LINE	L1	-3	6171	2301	3
chr4	173426220	173426221	chunk0147_102_1	26.01869	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	173426204	173426288	-16788267	-	LTR81B	LTR	Gypsy	-772	621	537	3
chr4	174207077	174207078	chunk0147_111_1	72.0164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	174207000	174207180	-16007375	-	L1ME4b	LINE	L1	-5	887	704	3
chr4	174400963	174400964	chunk0147_130_1	14.4052	AR_DHT_Control	chr4	174400759	174401732	-15812823	+	LTR5_Hs	LTR	ERVK	1	968	0	3
chr4	174618079	174618080	chunk0147_141_1	14.62902	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	174617956	174618395	-15596160	+	MER83	LTR	ERV1	1	448	0	3
chr4	174736451	174736452	chunk0147_142_1	11.4219	AR_DHT_Control	chr4	174736314	174736622	-15477933	-	L1MB5	LINE	L1	-6	6174	5853	3
chr4	174875452	174875453	chunk0147_143_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	174874957	174875534	-15339021	-	HERVL-int	LTR	ERVL	-1867	3787	3177	3
chr4	175689548	175689549	chunk0147_152_1	13.33269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	175689491	175689764	-14524791	-	L1MB1	LINE	L1	-3362	2778	2487	3
chr4	175709027	175709028	chunk0147_156_1	18.47582	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	175708852	175709147	-14505408	-	L1MEd	LINE	L1	-2517	3629	3327	3
chr4	175910105	175910106	chunk0147_162_1	19.36563	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	175910006	175910208	-14304347	-	MER63A	DNA	hAT-Blackjack	0	210	1	3
chr4	176243130	176243131	chunk0147_166_1	54.8178	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	176242920	176243146	-13971409	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr4	176335946	176335947	chunk0147_171_1	8.22827	AR_DHT_Control	chr4	176335688	176335973	-13878582	-	L1ME3B	LINE	L1	-272	5970	5650	3
chr4	177303714	177303715	chunk0147_182_1	8.74268	AR_DHT_Control	chr4	177303640	177303837	-12910718	+	L2a	LINE	L2	3227	3421	-5	3
chr4	177304377	177304378	chunk0147_183_1	46.4415	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	177304185	177305214	-12909341	+	Tigger3b	DNA	TcMar-Tigger	1	1012	-219	3
chr4	177489277	177489278	chunk0147_188_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	177488577	177490143	-12724412	-	ERVL-E-int	LTR	ERVL	-1969	3698	2045	3
chr4	177785585	177785586	chunk0147_197_1	9.85287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	177784712	177786267	-12428288	+	L1PB	LINE	L1	4207	5771	-380	3
chr4	178833469	178833470	chunk0147_206_1	9.21264	AR_DHT_Control	chr4	178832788	178833489	-11381066	-	L1MC1	LINE	L1	0	6333	5619	3
chr4	179643677	179643678	chunk0147_207_1	5.6425	AR_DHT_Control	chr4	179643663	179643880	-10570675	+	MamGypLTR3a	LTR	Gypsy	733	964	-17	3
chr4	180482808	180482809	chunk0147_213_1	9.15158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	180482590	180482922	-9731633	+	MER58B	DNA	hAT-Charlie	1	341	0	3
chr4	180870647	180870648	chunk0147_218_1	17.9538	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	180869852	180876257	-9338298	-	L1PB1	LINE	L1	-3	6864	252	3
chr4	181590961	181590962	chunk0147_223_1	37.2785	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	181590921	181591157	-8623398	+	Charlie24	DNA	hAT-Charlie	223	478	-1972	3
chr4	181955978	181955979	chunk0147_226_1	98.09008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	181955964	181956308	-8258247	-	MLT1A0	LTR	ERVL-MaLR	0	365	1	3
chr4	182569033	182569034	chunk0147_235_1	15.96395	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	182568462	182569155	-7645400	+	L1ME2	LINE	L1	5449	6156	-8	3
chr4	182813371	182813372	chunk0147_238_1	6.09694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	182813241	182813617	-7400938	+	(AC)n	Simple_repeat	Simple_repeat	1	394	0	3
chr4	182906137	182906138	chunk0147_240_1	4.71246	AR_DHT_Control	chr4	182905592	182906142	-7308413	+	L2c	LINE	L2	2098	2792	-627	3
chr4	182993695	182993696	chunk0147_242_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	182993341	182994367	-7220188	+	L1M4c	LINE	L1	5	1095	-5289	3
chr4	183042218	183042219	chunk0147_243_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	183041715	183042514	-7172041	-	L1MEd	LINE	L1	-2301	3845	2982	3
chr4	183057523	183057524	chunk0147_244_1	40.20809	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	183057355	183057747	-7156808	-	L1ME3B	LINE	L1	-56	6186	5753	3
chr4	183131011	183131012	chunk0147_248_1	32.1389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	183130992	183131434	-7083121	+	L1MD	LINE	L1	4756	5197	-949	3
chr4	183260702	183260703	chunk0147_251_1	102.3958	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	183260417	183260762	-6953793	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr4	183599801	183599802	chunk0147_260_1	5.6425	AR_DHT_Control	chr4	183599601	183600674	-6613881	-	L1M4	LINE	L1	-6425	1092	4	3
chr4	183621935	183621936	chunk0147_261_1	28.2408	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	183621396	183622220	-6592335	+	L1MC4	LINE	L1	7055	7896	-146	3
chr4	183764513	183764514	chunk0147_269_1	6.65967	AR_DHT_Control	chr4	183764121	183764782	-6449773	-	MLT2F	LTR	ERVL	-6	657	3	3
chr4	184236747	184236748	chunk0147_280_1	26.0177	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184236534	184237431	-5977124	+	L1MC3	LINE	L1	6835	7773	-12	3
chr4	184306586	184306587	chunk0147_283_1	16.36872	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184306564	184306791	-5907764	+	MER58A	DNA	hAT-Charlie	1	223	-1	3
chr4	184308050	184308051	chunk0147_285_1	71.90494	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184307774	184308217	-5906338	-	Tigger3b	DNA	TcMar-Tigger	-700	531	66	3
chr4	184331601	184331602	chunk0147_288_1	19.66294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184331392	184331956	-5882599	-	LTR82B	LTR	ERVL	-80	750	181	3
chr4	184400464	184400465	chunk0147_292_1	13.6782	AR_DHT_Control	chr4	184399858	184400808	-5813747	-	L1MD2	LINE	L1	-10	6349	5411	3
chr4	184530857	184530858	chunk0147_296_1	19.60124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184530586	184531280	-5683275	-	L1ME1	LINE	L1	-52	6127	5415	3
chr4	184749729	184749730	chunk0147_302_1	24.6705	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184749678	184749788	-5464767	+	MIRb	SINE	MIR	31	158	-110	3
chr4	184838391	184838392	chunk0147_306_1	8.79742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184838136	184838454	-5376101	-	AluJr	SINE	Alu	-2	310	1	3
chr4	184913439	184913440	chunk0147_313_1	50.9307	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	184913205	184913472	-5301083	-	AluJr	SINE	Alu	-18	294	1	3
chr4	184951561	184951562	chunk0147_316_1	7.91724	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	184951118	184951784	-5262771	+	L1MB7	LINE	L1	5451	6167	-17	3
chr4	185150540	185150541	chunk0147_325_1	7.36432	AR_DHT_Control	chr4	185150454	185151056	-5063499	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	3
chr4	185196099	185196100	chunk0147_327_1	36.5375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	185196079	185196191	-5018364	+	MER112	DNA	hAT-Charlie	1	115	-146	3
chr4	185318814	185318815	chunk0147_334_1	11.50647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	185318796	185319077	-4895478	+	MER4C	LTR	ERV1	1	308	-157	3
chr4	185457250	185457251	chunk0147_338_1	8.27376	AR_DHT_Control	chr4	185457199	185457620	-4756935	+	LTR40a	LTR	ERVL	90	519	0	3
chr4	185464398	185464399	chunk0147_339_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	185463983	185464405	-4750150	+	LTR84b	LTR	ERVL	160	610	-151	3
chr4	185637575	185637576	chunk0147_348_1	14.29076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	185637541	185637625	-4576930	+	MIRb	SINE	MIR	46	141	-127	3
chr4	185709915	185709916	chunk0147_355_1	26.96	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	185709866	185709967	-4504588	-	HY1	scRNA	scRNA	0	119	1	3
chr4	185880838	185880839	chunk0147_367_1	93.8703	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	185880711	185881245	-4333310	+	HAL1b	LINE	L1	511	1036	-1385	3
chr4	185958354	185958355	chunk0147_371_1	112.2397	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	185957851	185958396	-4256159	+	HAL1	LINE	L1	413	995	-1512	3
chr4	186248765	186248766	chunk0147_379_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	186248281	186249701	-3964854	-	L1MB7	LINE	L1	-148	6036	4558	3
chr4	186657152	186657153	chunk0147_389_1	17.79362	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	186657124	186657672	-3556883	+	L1ME1	LINE	L1	5633	6178	-1	3
chr4	186687375	186687376	chunk0147_393_1	8.33755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	186687312	186687491	-3527064	+	L1M5	LINE	L1	5488	5682	-442	3
chr4	186950138	186950139	chunk0147_410_1	78.66913	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	186950072	186950148	-3264407	+	MIRc	SINE	MIR	77	152	-116	3
chr4	186952298	186952299	chunk0147_412_1	20.77184	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	186952269	186952399	-3262156	-	MIRb	SINE	MIR	-10	258	127	3
chr4	187208210	187208211	chunk0147_418_1	47.80711	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	187208143	187208221	-3006334	+	L2b	LINE	L2	3290	3367	-8	3
chr4	187413747	187413748	chunk0147_430_1	17.12355	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	187413693	187413920	-2800635	-	MIRb	SINE	MIR	-6	262	32	3
chr4	187479632	187479633	chunk0147_433_1	25.0988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr4	187479632	187480100	-2734455	+	L3	LINE	CR1	3566	4082	-17	3
chr4	187480621	187480622	chunk0147_435_1	66.01382	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	187480523	187480659	-2733896	-	L2c	LINE	L2	-4	3383	3227	3
chr4	187500122	187500123	chunk0147_438_1	48.76085	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr4	187500036	187500270	-2714285	+	Tigger3c	DNA	TcMar-Tigger	345	585	-17	3
chr4	187591160	187591161	chunk0147_441_1	28.389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	187591139	187591221	-2623334	+	L2b	LINE	L2	3294	3375	0	3
chr4	187767716	187767717	chunk0147_445_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	187767695	187768116	-2446439	-	LTR49-int	LTR	ERV1	0	6331	5928	3
chr4	187769131	187769132	chunk0147_446_1	9.21264	AR_DHT_Control	chr4	187768422	187769810	-2444745	-	LTR49-int	LTR	ERV1	-404	5927	4518	3
chr4	188182271	188182272	chunk0147_451_1	50.01264	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	188182109	188182948	-2031607	+	L1MC1	LINE	L1	5478	6330	-3	3
chr4	188354346	188354347	chunk0147_453_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	188354196	188354954	-1859601	-	L1M3b	LINE	L1	-5537	744	1	3
chr4	189121602	189121603	chunk0148_433_1	22.12591	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr4	189116129	189122004	-1092551	+	L1PB1	LINE	L1	1	6118	-744	3
chr4	189265987	189265988	chunk0148_438_1	11.1716	AR_DHT_Control	chr4	189265334	189266142	-948413	+	L2a	LINE	L2	2516	3401	-25	3
chr4	190177921	190177922	chunk0148_447_1	26.9965	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	190175761	190180287	-34268	+	BSR/Beta	Satellite	Satellite	1	4511	-8	3
chr4	190179101	190179102	chunk0148_448_1	11.9014	SRA057177_Lncap_AR_DHT_10nm_4hr	chr4	190175761	190180287	-34268	+	BSR/Beta	Satellite	Satellite	1	4511	-8	3
chr5	57092	57093	chunk0148_2_1	15.94153	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	57012	57139	-181481120	+	L2b	LINE	L2	3247	3374	-1	3
chr5	149954	149955	chunk0148_4_1	101.30733	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149558	150502	-181387757	+	L1MB3	LINE	L1	5179	6144	-39	3
chr5	208771	208772	chunk0148_13_1	42.44945	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	208127	209066	-181329193	+	L1MDa	LINE	L1	16	1358	-5275	3
chr5	335417	335418	chunk0148_15_1	7.36432	AR_DHT_Control	chr5	333615	336457	-181201802	-	L1M2	LINE	L1	-3983	2866	13	3
chr5	348751	348752	chunk0148_17_1	29.04352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	348358	349295	-181188964	-	L1ME1	LINE	L1	-15	6164	5162	3
chr5	410570	410571	chunk0148_21_1	58.3102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	410511	411227	-181127032	-	L1ME2	LINE	L1	-2615	3531	3066	3
chr5	529885	529886	chunk0148_22_1	20.89903	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	529546	530441	-181007818	-	L1M5	LINE	L1	-2585	3561	2736	3
chr5	600591	600592	chunk0148_24_1	83.88102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	600294	600805	-180937454	-	L1PA16	LINE	L1	-819	5327	4803	3
chr5	614872	614873	chunk0148_26_1	13.468	AR_DHT_Control	chr5	614660	615126	-180923133	-	L1MDa	LINE	L1	-3250	3287	2788	3
chr5	654246	654247	chunk0148_29_1	8.71584	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	653956	654479	-180883780	+	(TG)n	Simple_repeat	Simple_repeat	1	476	0	3
chr5	836377	836378	chunk0148_34_1	8.27376	AR_DHT_Control	chr5	834971	836729	-180701530	-	L1MEd	LINE	L1	-946	5200	3413	3
chr5	1211795	1211796	chunk0148_39_1	4.5323	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	1211778	1211842	-180326417	+	(GTGCATGT)n	Simple_repeat	Simple_repeat	1	68	0	3
chr5	1772689	1772690	chunk0148_55_1	17.26638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	1772654	1772747	-179765512	+	(ACAA)n	Simple_repeat	Simple_repeat	1	93	0	3
chr5	1930071	1930072	chunk0148_58_1	16.08546	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	1929061	1930478	-179607781	+	(GTGTCGT)n	Simple_repeat	Simple_repeat	1	1512	0	3
chr5	2055736	2055737	chunk0148_62_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	2054920	2055929	-179482330	+	L1ME2	LINE	L1	4717	5764	-400	3
chr5	2369297	2369298	chunk0148_72_1	7.16145	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	2369031	2369490	-179168769	+	(CATG)n	Simple_repeat	Simple_repeat	1	495	0	3
chr5	2445908	2445909	chunk0148_73_1	45.0481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	2445773	2445935	-179092324	+	L3	LINE	CR1	3073	3235	-864	3
chr5	2510175	2510176	chunk0148_76_1	59.1215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	2509951	2510222	-179028037	-	L1MC5	LINE	L1	-1348	7956	7668	3
chr5	3212116	3212117	chunk0148_86_1	5.56714	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	3211607	3212538	-178325721	+	(GT)n	Simple_repeat	Simple_repeat	1	942	0	3
chr5	3212399	3212400	chunk0148_87_1	6.0927	AR_DHT_Control	chr5	3211607	3212538	-178325721	+	(GT)n	Simple_repeat	Simple_repeat	1	942	0	3
chr5	3486415	3486416	chunk0148_90_1	126.3546	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	3486257	3486786	-178051473	+	L1MB5	LINE	L1	5615	6145	-29	3
chr5	3501675	3501676	chunk0148_91_1	7.03714	AR_DHT_Control	chr5	3501226	3502204	-178036055	+	L1ME2	LINE	L1	5119	6162	-2	3
chr5	3556379	3556380	chunk0148_93_1	24.7814	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	3554317	3556726	-177981533	+	L1MC1	LINE	L1	3655	6238	-270	3
chr5	3851833	3851834	chunk0148_98_1	40.3153	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	3851724	3852328	-177685931	+	L1MB8	LINE	L1	5558	6173	-5	3
chr5	4516453	4516454	chunk0148_107_1	30.90688	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	4516412	4516523	-177021736	-	MIRb	SINE	MIR	-73	195	71	3
chr5	4581226	4581227	chunk0148_110_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	4580859	4581467	-176956792	+	(CACGCA)n	Simple_repeat	Simple_repeat	1	626	0	3
chr5	5120226	5120227	chunk0148_113_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	5117270	5120989	-176417270	-	L1PA14	LINE	L1	-2615	4058	64	3
chr5	5153325	5153326	chunk0148_115_1	30.2933	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	5153263	5153369	-176384890	+	L2c	LINE	L2	3221	3335	-52	3
chr5	5175054	5175055	chunk0148_119_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	5174832	5176110	-176362149	-	L1M1	LINE	L1	-6245	1320	14	3
chr5	5467603	5467604	chunk0148_129_1	15.57591	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	5467495	5467680	-176070579	+	L2a	LINE	L2	3162	3365	-61	3
chr5	5617239	5617240	chunk0148_134_1	8.73763	AR_DHT_Control	chr5	5617028	5618164	-175920095	-	L1ME2	LINE	L1	0	6164	4905	3
chr5	6064888	6064889	chunk0148_143_1	11.5199	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	6063374	6066047	-175472212	+	L1MC1	LINE	L1	3376	6019	-314	3
chr5	6085760	6085761	chunk0148_144_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	6085542	6085842	-175452417	+	LTR34	LTR	ERV1	1	302	-397	3
chr5	6283516	6283517	chunk0148_145_1	5.20246	AR_DHT_Control	chr5	6282872	6283710	-175254549	+	L1MEd	LINE	L1	19	881	-6205	3
chr5	6590773	6590774	chunk0148_156_1	54.2412	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	6590495	6590818	-174947441	+	L1ME4b	LINE	L1	332	677	-215	3
chr5	6766680	6766681	chunk0148_164_1	6.71486	AR_DHT_Control	chr5	6766671	6766710	-174771549	+	(CTCC)n	Simple_repeat	Simple_repeat	1	40	0	3
chr5	6830838	6830839	chunk0148_165_1	8.46481	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	6830503	6831197	-174707062	+	(ACAC)n	Simple_repeat	Simple_repeat	1	708	0	3
chr5	7649587	7649588	chunk0148_175_1	37.8729	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	7649570	7650203	-173888056	+	L2	LINE	L2	2200	2909	-510	3
chr5	7763976	7763977	chunk0148_179_1	5.16131	AR_DHT_Control	chr5	7763859	7764037	-173774222	+	L4_B_Mam	LINE	RTE-X	3237	3426	-1515	3
chr5	7834869	7834870	chunk0148_183_1	15.06	AR_DHT_Control	chr5	7833691	7834933	-173703326	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	3
chr5	7851796	7851797	chunk0148_185_1	31.88451	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	7851776	7851851	-173686408	+	L1ME3A	LINE	L1	6053	6126	-47	3
chr5	8061152	8061153	chunk0148_188_1	58.02371	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	8060981	8061182	-173477077	+	AmnSINE1	SINE	5S-Deu-L2	347	538	-37	3
chr5	8166061	8166062	chunk0148_191_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	8164644	8166724	-173371535	-	L1PA13	LINE	L1	-4020	2765	13	3
chr5	8225395	8225396	chunk0148_192_1	12.3853	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	8220024	8226185	-173312074	+	L1PA7	LINE	L1	316	6469	0	3
chr5	8530516	8530517	chunk0148_200_1	15.06853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	8530207	8530991	-173007268	-	HAL1	LINE	L1	-100	2407	1570	3
chr5	8539000	8539001	chunk0148_204_1	133.5281	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	8538787	8539597	-172998662	+	L1ME2z	LINE	L1	5584	6442	-2	3
chr5	8660686	8660687	chunk0148_213_1	24.3423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	8660684	8660860	-172877399	+	L1MC4a	LINE	L1	5826	5997	-362	3
chr5	8825779	8825780	chunk0148_216_1	11.2788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	8825582	8825803	-172712456	+	MIR	SINE	MIR	26	262	0	3
chr5	8930927	8930928	chunk0148_219_1	82.4717	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	8930895	8931262	-172606997	-	L1MC3	LINE	L1	-15	7770	7379	3
chr5	9208467	9208468	chunk0148_226_1	8.18895	AR_DHT_Control	chr5	9208381	9208481	-172329778	-	L2a	LINE	L2	-44	3382	3269	3
chr5	9633857	9633858	chunk0148_241_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	9633320	9639646	-171898613	-	L1PB2	LINE	L1	-371	6496	1	3
chr5	9836748	9836749	chunk0148_244_1	43.8983	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	9836731	9837508	-171700751	+	ERVL-E-int	LTR	ERVL	785	1662	-4052	3
chr5	10140700	10140701	chunk0148_247_1	65.70581	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	10140672	10140815	-171397444	-	L2c	LINE	L2	-10	3377	3204	3
chr5	10148453	10148454	chunk0148_248_1	7.62275	AR_DHT_Control	chr5	10148102	10148805	-171389454	+	FordPrefect	DNA	hAT-Tip100	954	1681	-2	3
chr5	10208753	10208754	chunk0148_250_1	63.3384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	10208654	10208832	-171329427	-	L1MC4	LINE	L1	-4950	1265	1099	3
chr5	10324002	10324003	chunk0148_258_1	11.87239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	10323827	10324059	-171214200	+	MIR	SINE	MIR	10	249	-13	3
chr5	10366889	10366890	chunk0148_263_1	26.89804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	10366468	10366962	-171171297	-	LTR3B_	LTR	ERVK	0	499	1	3
chr5	10481327	10481328	chunk0148_268_1	5.25527	AR_DHT_Control	chr5	10481188	10481640	-171056619	-	MER74A	LTR	ERVL	0	558	1	3
chr5	10762738	10762739	chunk0148_278_1	6.10347	AR_DHT_Control	chr5	10762572	10763073	-170775186	+	L2a	LINE	L2	1860	2385	-1034	3
chr5	10774342	10774343	chunk0148_279_1	13.042	AR_DHT_Control	chr5	10774244	10774456	-170763803	+	MER58A	DNA	hAT-Charlie	4	224	0	3
chr5	10779813	10779814	chunk0148_280_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	10779217	10779972	-170758287	+	L1M2b	LINE	L1	1	795	-6414	3
chr5	10982742	10982743	chunk0148_282_1	37.66247	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	10982611	10983294	-170554965	+	L1MA4	LINE	L1	5606	6292	-8	3
chr5	11712109	11712110	chunk0148_286_1	154.2057	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	11711983	11712181	-169826078	+	MIRc	SINE	MIR	52	253	-15	3
chr5	12208553	12208554	chunk0148_297_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	12205690	12208718	-169329541	-	L1PA15	LINE	L1	-2538	5603	2551	3
chr5	12468148	12468149	chunk0148_301_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	12467224	12473915	-169064344	+	L1PREC2	LINE	L1	13	6700	-80	3
chr5	12510534	12510535	chunk0148_302_1	30.4414	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	12510280	12512270	-169025989	-	L1PA11	LINE	L1	-2643	3688	1678	3
chr5	12584080	12584081	chunk0148_303_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	12583061	12584730	-168953529	-	L1MA2	LINE	L1	-5049	2516	2141	3
chr5	12688665	12688666	chunk0148_304_1	7.03714	AR_DHT_Control	chr5	12688621	12689793	-168848466	+	L2a	LINE	L2	2169	3424	-2	3
chr5	12758386	12758387	chunk0148_306_1	61.1333	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	12758259	12758464	-168779795	+	MER58A	DNA	hAT-Charlie	1	211	-13	3
chr5	12935986	12935987	chunk0148_308_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	12935154	12935996	-168602263	+	HERVL18-int	LTR	ERVL	3	961	-5086	3
chr5	12935986	12935987	chunk0148_308_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	12935984	12936341	-168601918	+	HERVL18-int	LTR	ERVL	1388	1810	-4237	3
chr5	13081206	13081207	chunk0148_311_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	13080373	13081504	-168456755	+	LTR2752	LTR	ERV1	1	1263	0	3
chr5	13403881	13403882	chunk0148_312_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	13403064	13403979	-168134280	-	L2	LINE	L2	-1568	1851	809	3
chr5	13428509	13428510	chunk0148_313_1	4.75321	AR_DHT_Control	chr5	13428149	13428669	-168109590	-	MLT1D	LTR	ERVL-MaLR	0	505	1	3
chr5	13743922	13743923	chunk0148_317_1	5.41601	AR_DHT_Control	chr5	13743327	13744635	-167793624	+	L1MA5A	LINE	L1	4990	6297	0	3
chr5	13939147	13939148	chunk0148_319_1	45.9814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	13939096	13939215	-167599044	+	L2a	LINE	L2	3299	3420	-6	3
chr5	13969435	13969436	chunk0148_324_1	11.5684	AR_DHT_Control	chr5	13967161	13972865	-167565394	-	L1PB1	LINE	L1	-979	5880	4	3
chr5	14107322	14107323	chunk0148_327_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14107161	14107342	-167430917	-	L1MEd	LINE	L1	-5798	1288	1100	3
chr5	14131919	14131920	chunk0148_328_1	143.8927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	14131790	14131965	-167406294	+	L5	LINE	RTE-X	2088	2259	-6	3
chr5	14407271	14407272	chunk0148_342_1	9.57048	AR_DHT_Control	chr5	14407137	14407524	-167130735	-	MER54A	LTR	ERVL	-471	430	6	3
chr5	14519802	14519803	chunk0148_348_1	9.22214	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14519478	14520221	-167018038	-	L1PREC2	LINE	L1	-672	5488	4781	3
chr5	14523837	14523838	chunk0148_349_1	91.7101	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14523607	14523990	-167014269	+	L1MC1	LINE	L1	5452	5835	-498	3
chr5	14564878	14564879	chunk0148_356_1	27.16093	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14564660	14565117	-166973142	-	HAL1	LINE	L1	-206	2301	1805	3
chr5	14589221	14589222	chunk0148_362_1	317.2866	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14589050	14589491	-166948768	-	L2c	LINE	L2	-1	3386	2910	3
chr5	14627471	14627472	chunk0148_367_1	14.70242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	14627466	14627558	-166910701	+	L1MA9	LINE	L1	5681	5771	-541	3
chr5	14628035	14628036	chunk0148_370_1	31.4116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	14627600	14628054	-166910205	+	L1MA9	LINE	L1	5772	6287	-25	3
chr5	14633372	14633373	chunk0148_372_1	25.9064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14633296	14633432	-166904827	-	L2c	LINE	L2	-12	3414	3247	3
chr5	14898301	14898302	chunk0148_406_1	16.2346	AR_DHT_Control	chr5	14898128	14898436	-166639823	+	L1ME3Cz	LINE	L1	444	744	-253	3
chr5	14917874	14917875	chunk0148_407_1	7.57442	AR_DHT_Control	chr5	14917759	14917891	-166620368	-	L2	LINE	L2	-671	2748	2619	3
chr5	14929499	14929500	chunk0148_409_1	287.0534	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	14929206	14929957	-166608302	+	MER21A	LTR	ERVL	187	924	-7	3
chr5	15043270	15043271	chunk0148_422_1	10.4206	AR_DHT_Control	chr5	15042774	15043485	-166494774	-	Tigger3b	DNA	TcMar-Tigger	-464	767	1	3
chr5	15104096	15104097	chunk0148_423_1	15.13973	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	15103935	15104102	-166434157	-	MIRb	SINE	MIR	-55	213	35	3
chr5	15356807	15356808	chunk0148_428_1	234.8238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr5	15356098	15362259	-166176000	+	L1PA6	LINE	L1	5	6153	-1	3
chr5	15612620	15612621	chunk0149_3_1	7.5995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	15612469	15613178	-165925081	+	Charlie29a	DNA	hAT-Charlie	17	716	-3	3
chr5	15657987	15657988	chunk0149_4_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	15657855	15658119	-165880140	+	MLT1N2	LTR	ERVL-MaLR	1	294	-268	3
chr5	15892530	15892531	chunk0149_13_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	15892160	15892547	-165645712	-	L2a	LINE	L2	-325	3101	2652	3
chr5	15993686	15993687	chunk0149_19_1	30.3079	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	15993675	15993699	-165544560	+	(AC)n	Simple_repeat	Simple_repeat	1	24	0	3
chr5	16136345	16136346	chunk0149_21_1	65.4339	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	16136114	16136481	-165401778	+	L1M7	LINE	L1	1195	1599	-4712	3
chr5	16165312	16165313	chunk0149_24_1	73.3235	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	16165260	16165929	-165372330	-	L1MC3	LINE	L1	-17	7768	7066	3
chr5	16211840	16211841	chunk0149_27_1	4.57744	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	16211838	16212174	-165326085	+	MLT1H1	LTR	ERVL-MaLR	221	555	0	3
chr5	16275599	16275600	chunk0149_31_1	41.82541	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	16275417	16275756	-165262503	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr5	16351023	16351024	chunk0149_32_1	27.61184	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	16350757	16351197	-165187062	-	LTR47B3	LTR	ERVL	0	464	5	3
chr5	16627866	16627867	chunk0149_48_1	18.82848	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	16627620	16628032	-164910227	+	L1MC5a	LINE	L1	1263	1640	-1137	3
chr5	17087274	17087275	chunk0149_68_1	8.1827	AR_DHT_Control	chr5	17087102	17087315	-164450944	+	MLT1B	LTR	ERVL-MaLR	178	378	-12	3
chr5	17173003	17173004	chunk0149_73_1	20.4543	AR_DHT_Control	chr5	17172759	17173304	-164364955	+	L1ME1	LINE	L1	5523	6051	-128	3
chr5	17289807	17289808	chunk0149_79_1	9.76623	AR_DHT_Control	chr5	17289561	17289848	-164248411	-	L2	LINE	L2	-2916	503	207	3
chr5	17998558	17998559	chunk0149_91_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	17997559	17999997	-163538262	-	L1MA7	LINE	L1	-2	6289	3879	3
chr5	18507340	18507341	chunk0149_93_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	18506975	18507421	-163030838	-	Tigger3	DNA	TcMar-Tigger	-31	2998	2561	3
chr5	18547155	18547156	chunk0149_94_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	18546928	18547195	-162991064	-	LTR75_1	LTR	ERV1	-242	304	43	3
chr5	18687115	18687116	chunk0149_99_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	18686977	18687497	-162850762	-	L1MEg	LINE	L1	-4846	1396	889	3
chr5	18984711	18984712	chunk0149_101_1	15.83658	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	18984524	18984767	-162553492	+	MIR	SINE	MIR	11	235	-27	3
chr5	19001261	19001262	chunk0149_105_1	8.41215	AR_DHT_Control	chr5	19001114	19001484	-162536775	-	ERVL-E-int	LTR	ERVL	-4200	1467	1052	3
chr5	19022651	19022652	chunk0149_106_1	23.83698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	19022286	19022705	-162515554	-	MER83	LTR	ERV1	0	448	1	3
chr5	19133966	19133967	chunk0149_108_1	22.8437	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	19133737	19134076	-162404183	+	L2a	LINE	L2	3044	3414	-12	3
chr5	19184578	19184579	chunk0149_109_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	19184089	19187065	-162351194	+	L1PA15-16	LINE	L1	282	3204	-3645	3
chr5	19209673	19209674	chunk0149_110_1	9.19836	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	19208434	19209974	-162328285	+	MER52A	LTR	ERV1	1	1755	0	3
chr5	19263474	19263475	chunk0149_111_1	110.8063	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	19263127	19263590	-162274669	-	LTR40a	LTR	ERVL	-35	484	1	3
chr5	19318318	19318319	chunk0149_116_1	15.84442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	19318265	19318480	-162219779	+	MER58A	DNA	hAT-Charlie	2	218	-6	3
chr5	19455104	19455105	chunk0149_119_1	20.18992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	19454418	19456170	-162082089	+	L1MC3	LINE	L1	4942	6706	-1079	3
chr5	19486137	19486138	chunk0149_121_1	20.91097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	19485957	19486281	-162051978	+	L3	LINE	CR1	769	1120	-2979	3
chr5	19533747	19533748	chunk0149_124_1	55.60022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	19532588	19533940	-162004319	-	L2	LINE	L2	-602	2817	1411	3
chr5	19727377	19727378	chunk0149_129_1	19.1526	AR_DHT_Control	chr5	19727170	19727627	-161810632	+	MLT1C	LTR	ERVL-MaLR	1	465	-2	3
chr5	19863524	19863525	chunk0149_134_1	6.43609	AR_DHT_Control	chr5	19863356	19863619	-161674640	-	MER45C	DNA	hAT-Tip100	-333	620	334	3
chr5	20062403	20062404	chunk0149_145_1	9.21264	AR_DHT_Control	chr5	20062176	20062423	-161475836	-	AluSz	SINE	Alu	-30	282	31	3
chr5	20168776	20168777	chunk0149_146_1	11.0699	AR_DHT_Control	chr5	20168674	20169287	-161368972	+	L1MA1	LINE	L1	5671	6302	0	3
chr5	20202885	20202886	chunk0149_149_1	11.1716	AR_DHT_Control	chr5	20202862	20203882	-161334377	+	L1MA4	LINE	L1	1249	2240	-4325	3
chr5	20215332	20215333	chunk0149_150_1	6.18182	AR_DHT_Control	chr5	20215238	20215430	-161322829	+	L1MC3	LINE	L1	6920	7109	-676	3
chr5	20340231	20340232	chunk0149_158_1	30.7278	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	20338162	20341119	-161197140	+	MER52-int	LTR	ERV1	730	3519	-5400	3
chr5	20409671	20409672	chunk0149_160_1	7.91029	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	20407562	20411764	-161126495	+	L1MB2	LINE	L1	1379	5878	-848	3
chr5	20497550	20497551	chunk0149_165_1	125.6214	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	20497313	20497645	-161040614	+	Tigger3a	DNA	TcMar-Tigger	16	348	0	3
chr5	20651489	20651490	chunk0149_171_1	10.3253	AR_DHT_Control	chr5	20650431	20653041	-160885218	+	L1PA8A	LINE	L1	4310	6967	-1174	3
chr5	20694153	20694154	chunk0149_172_1	8.27376	AR_DHT_Control	chr5	20693998	20694328	-160843931	+	MLT1A1	LTR	ERVL-MaLR	74	408	0	3
chr5	20832663	20832664	chunk0149_175_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	20832609	20832950	-160705309	-	L1MEc	LINE	L1	-5271	1152	795	3
chr5	21152830	21152831	chunk0149_179_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	21152726	21153197	-160385062	+	MamGypsy2-I	LTR	Gypsy	2805	3314	-852	3
chr5	21219762	21219763	chunk0149_186_1	5.24411	AR_DHT_Control	chr5	21219479	21220053	-160318206	+	MER67B	LTR	ERV1	39	661	0	3
chr5	21350623	21350624	chunk0149_189_1	61.3409	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	21350474	21350744	-160187515	+	MLT1D	LTR	ERVL-MaLR	21	300	-144	3
chr5	21370976	21370977	chunk0149_190_1	10.1791	AR_DHT_Control	chr5	21370953	21371004	-160167255	+	(GT)n	Simple_repeat	Simple_repeat	1	53	0	3
chr5	21447709	21447710	chunk0149_194_1	109.9677	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	21447478	21447760	-160090499	-	L1MC2	LINE	L1	-516	5828	5548	3
chr5	21620065	21620066	chunk0149_197_1	76.7854	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	21620011	21622016	-159916243	+	MER4B-int	LTR	ERV1	972	3101	-3657	3
chr5	21641588	21641589	chunk0149_199_1	11.1388	AR_DHT_Control	chr5	21641424	21642017	-159896242	-	MLT1E1A	LTR	ERVL-MaLR	0	680	1	3
chr5	21687088	21687089	chunk0149_206_1	9.06816	AR_DHT_Control	chr5	21686813	21687688	-159850571	+	Tigger3b	DNA	TcMar-Tigger	1	927	-304	3
chr5	21688700	21688701	chunk0149_207_1	6.54253	AR_DHT_Control	chr5	21688390	21688742	-159849517	+	THE1A	LTR	ERVL-MaLR	1	355	0	3
chr5	21693872	21693873	chunk0149_208_1	5.6425	AR_DHT_Control	chr5	21693859	21693905	-159844354	-	L2a	LINE	L2	-8	3418	3373	3
chr5	21708640	21708641	chunk0149_209_1	8.27376	AR_DHT_Control	chr5	21708560	21709046	-159829213	-	MER70A	LTR	ERVL	0	472	1	3
chr5	21768917	21768918	chunk0149_211_1	18.23048	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	21768411	21769466	-159768793	+	L1M4	LINE	L1	3240	4348	-1798	3
chr5	22060813	22060814	chunk0149_217_1	7.22166	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	22060645	22061061	-159477198	+	LTR40b	LTR	ERVL	3	407	-55	3
chr5	22066017	22066018	chunk0149_218_1	50.4449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	22064394	22066165	-159472094	+	ERVL-B4-int	LTR	ERVL	5	1868	-3846	3
chr5	22080174	22080175	chunk0149_221_1	41.5484	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	22080044	22080236	-159458023	+	ORSL-2a	DNA	hAT-Tip100	2	203	-139	3
chr5	22090955	22090956	chunk0149_222_1	52.9016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	22090628	22091183	-159447076	+	L1MB8	LINE	L1	4551	5105	-1901	3
chr5	22626005	22626006	chunk0149_226_1	11.6341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	22625351	22631603	-158906656	+	L1PA15	LINE	L1	221	6581	-204	3
chr5	22971288	22971289	chunk0149_228_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	22968811	22971647	-158566612	-	L1PA15	LINE	L1	-4206	3949	835	3
chr5	23325095	23325096	chunk0149_234_1	7.36432	AR_DHT_Control	chr5	23324865	23325200	-158213059	+	MLT1E2	LTR	ERVL-MaLR	296	627	0	3
chr5	23337005	23337006	chunk0149_235_1	11.1716	AR_DHT_Control	chr5	23336732	23337061	-158201198	+	MLT1C	LTR	ERVL-MaLR	102	439	-5	3
chr5	23424227	23424228	chunk0149_237_1	4.67092	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	23423962	23424762	-158113497	+	HERVL18-int	LTR	ERVL	2720	3580	-2467	3
chr5	23492335	23492336	chunk0149_238_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	23492156	23493027	-158045232	-	L1PA15	LINE	L1	-5935	850	13	3
chr5	23564439	23564440	chunk0149_245_1	20.15825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	23564211	23564549	-157973710	+	L1MA10	LINE	L1	6016	6333	-1	3
chr5	23612135	23612136	chunk0149_248_1	73.7801	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	23611824	23612942	-157925317	-	L1MA2	LINE	L1	-4645	2920	2066	3
chr5	23823979	23823980	chunk0149_252_1	29.72465	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	23823586	23824127	-157714132	+	MER77	LTR	ERVL	35	600	-4	3
chr5	23918921	23918922	chunk0149_258_1	16.4287	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	23918718	23919554	-157618705	+	L1PA15	LINE	L1	4906	5749	-416	3
chr5	23958253	23958254	chunk0149_260_1	4.33434	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	23958198	23959677	-157578582	+	L1PA10	LINE	L1	3394	4882	-1264	3
chr5	24073418	24073419	chunk0149_266_1	52.41382	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	24073060	24073526	-157464733	+	MER70A	LTR	ERVL	7	472	0	3
chr5	24088593	24088594	chunk0149_267_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	24087841	24088909	-157449350	+	L1PA12	LINE	L1	610	2367	-4614	3
chr5	24129221	24129222	chunk0149_269_1	23.00677	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	24128982	24129842	-157408417	+	L1ME1	LINE	L1	5288	6165	-1620	3
chr5	24547311	24547312	chunk0149_275_1	19.92633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	24547226	24547656	-156990603	+	L1MEg	LINE	L1	17	462	-5990	3
chr5	24823766	24823767	chunk0149_278_1	13.1127	AR_DHT_Control	chr5	24823251	24825084	-156713175	-	L1PA16	LINE	L1	-4906	1947	3	3
chr5	25005016	25005017	chunk0149_279_1	37.81129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	25005005	25005053	-156533206	+	(TCTGTAC)n	Simple_repeat	Simple_repeat	1	49	0	3
chr5	25106107	25106108	chunk0149_281_1	18.1063	AR_DHT_Control	chr5	25105077	25106295	-156431964	+	L1PA16	LINE	L1	4930	6161	-5	3
chr5	25125471	25125472	chunk0149_282_1	11.6878	AR_DHT_Control	chr5	25125296	25125808	-156412451	-	L1MC4	LINE	L1	-267	7775	7238	3
chr5	25331761	25331762	chunk0149_286_1	5.6425	AR_DHT_Control	chr5	25330451	25332075	-156206184	+	MER52D	LTR	ERV1	175	2114	-9	3
chr5	25357784	25357785	chunk0149_288_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	25357455	25358845	-156179414	+	L1MA2	LINE	L1	19	1435	-6130	3
chr5	25583150	25583151	chunk0149_294_1	6.48643	AR_DHT_Control	chr5	25582215	25586325	-155951934	-	L1PB2	LINE	L1	0	6867	2181	3
chr5	25615307	25615308	chunk0149_299_1	16.76829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	25615163	25615317	-155922942	-	L1M4c	LINE	L1	-4551	1833	1678	3
chr5	25638581	25638582	chunk0149_300_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	25638503	25638703	-155899556	-	L1MEi	LINE	L1	-738	1474	1270	3
chr5	25713544	25713545	chunk0149_301_1	8.27376	AR_DHT_Control	chr5	25713351	25713680	-155824579	+	MER1B	DNA	hAT-Charlie	1	338	-1	3
chr5	25796904	25796905	chunk0149_305_1	4.63316	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	25796063	25798311	-155739948	+	LTR57-int	LTR	ERVL	2626	4990	-353	3
chr5	25849398	25849399	chunk0149_306_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	25849395	25849546	-155688713	-	AluJr	SINE	Alu	-11	301	150	3
chr5	25892438	25892439	chunk0149_307_1	10.1791	AR_DHT_Control	chr5	25891788	25892455	-155645804	+	PABL_A	LTR	ERV1	1	660	0	3
chr5	26273245	26273246	chunk0149_310_1	16.1511	AR_DHT_Control	chr5	26273087	26273425	-155264834	-	L1MEc	LINE	L1	-5746	654	321	3
chr5	26278339	26278340	chunk0149_312_1	13.79853	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	26278330	26278390	-155259869	-	L2a	LINE	L2	-4	3422	3323	3
chr5	26353039	26353040	chunk0149_317_1	66.5681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	26353038	26357026	-155181233	-	L1MA4A	LINE	L1	-10	7355	3257	3
chr5	26369159	26369160	chunk0149_318_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	26369061	26369314	-155168945	-	L2a	LINE	L2	0	3426	3156	3
chr5	26400312	26400313	chunk0149_319_1	5.08049	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	26399074	26404708	-155133551	-	HERVL-int	LTR	ERVL	0	5654	1	3
chr5	26578191	26578192	chunk0149_325_1	28.1275	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	26577680	26578702	-154959557	-	Tigger4	DNA	TcMar-Tigger	-2	2729	1638	3
chr5	26641686	26641687	chunk0149_328_1	40.9791	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	26640992	26642640	-154895619	+	L1PREC2	LINE	L1	4519	6160	0	3
chr5	26765131	26765132	chunk0149_331_1	8.24382	AR_DHT_Control	chr5	26764507	26765432	-154772827	-	L1ME3	LINE	L1	-13	6151	4710	3
chr5	26902178	26902179	chunk0149_337_1	14.3856	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	26902099	26902249	-154636010	+	MIR	SINE	MIR	18	183	-85	3
chr5	26923535	26923536	chunk0149_338_1	28.7828	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	26923113	26924517	-154613742	+	L1M1	LINE	L1	3607	5033	-2532	3
chr5	26932531	26932532	chunk0149_341_1	29.8223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	26932468	26932981	-154605278	-	L1MCa	LINE	L1	-3667	2654	2103	3
chr5	27369309	27369310	chunk0149_347_1	14.9085	AR_DHT_Control	chr5	27369246	27369363	-154168896	-	MLT1H2	LTR	ERVL-MaLR	0	489	371	3
chr5	27387745	27387746	chunk0149_348_1	18.051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	27387674	27388093	-154150166	-	MER67C	LTR	ERV1	-294	417	1	3
chr5	27414159	27414160	chunk0149_352_1	46.5166	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	27413372	27414484	-154123775	-	L1MC3	LINE	L1	-1238	6547	5319	3
chr5	27590792	27590793	chunk0149_353_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	27587832	27591179	-153947080	-	L1PA16	LINE	L1	-2902	3581	99	3
chr5	27610749	27610750	chunk0149_354_1	5.6425	AR_DHT_Control	chr5	27610626	27610874	-153927385	-	MIR	SINE	MIR	0	262	6	3
chr5	27639344	27639345	chunk0149_355_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	27638982	27639758	-153898501	-	L1M1	LINE	L1	-6766	799	9	3
chr5	27655821	27655822	chunk0149_357_1	16.3646	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	27655653	27656162	-153882097	+	L2	LINE	L2	2539	3070	-349	3
chr5	27788301	27788302	chunk0149_360_1	30.53064	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	27788195	27788371	-153749888	-	L2b	LINE	L2	-259	3167	2985	3
chr5	27907394	27907395	chunk0149_364_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	27906784	27907736	-153630523	-	L2a	LINE	L2	-13	3413	2413	3
chr5	28067146	28067147	chunk0149_366_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	28065970	28068895	-153469364	+	L1PA13	LINE	L1	3	3049	-3717	3
chr5	28387171	28387172	chunk0149_378_1	7.82111	AR_DHT_Control	chr5	28387153	28387634	-153150625	+	LTR80A	LTR	ERVL	3	580	-3	3
chr5	28500627	28500628	chunk0149_380_1	8.27376	AR_DHT_Control	chr5	28500406	28501023	-153037236	-	MER67C	LTR	ERV1	0	711	1	3
chr5	28523151	28523152	chunk0149_381_1	7.11634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	28522759	28523157	-153015102	+	MER6	DNA	TcMar-Tigger	52	457	-408	3
chr5	28524115	28524116	chunk0149_383_1	34.1914	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	28523708	28524167	-153014092	-	MER67C	LTR	ERV1	-9	505	74	3
chr5	28542277	28542278	chunk0149_384_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	28541957	28542429	-152995830	-	MLT1H	LTR	ERVL-MaLR	-1	548	4	3
chr5	28671017	28671018	chunk0149_386_1	78.8009	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	28670812	28671345	-152866914	-	LTR38	LTR	ERV1	-12	544	1	3
chr5	28827617	28827618	chunk0149_393_1	52.17894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	28826772	28828475	-152709784	-	L1P4	LINE	L1	-381	5775	4058	3
chr5	28940077	28940078	chunk0149_401_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	28938606	28942955	-152595304	-	L1MA3	LINE	L1	-3112	4453	13	3
chr5	29400971	29400972	chunk0149_409_1	13.58313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	29399649	29401764	-152136495	+	L1MB7	LINE	L1	2126	4438	-2206	3
chr5	29408285	29408286	chunk0149_411_1	8.27376	AR_DHT_Control	chr5	29406132	29411576	-152126683	+	L1MA6	LINE	L1	2097	7707	-12	3
chr5	29431795	29431796	chunk0149_413_1	13.67041	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	29431680	29432541	-152105718	+	L1ME3B	LINE	L1	3871	4750	-1396	3
chr5	29498813	29498814	chunk0149_418_1	6.98682	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	29496717	29499681	-152038578	-	L1PA13	LINE	L1	-3704	3062	10	3
chr5	29514739	29514740	chunk0149_421_1	7.67158	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	29514386	29514994	-152023265	+	L1M5	LINE	L1	2444	3089	-3057	3
chr5	29556521	29556522	chunk0149_423_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	29555540	29556923	-151981336	-	L1MA5	LINE	L1	-5051	2515	1094	3
chr5	29566358	29566359	chunk0149_424_1	10.1791	AR_DHT_Control	chr5	29566118	29566718	-151971541	+	Tigger9b	DNA	TcMar-Tigger	1	624	0	3
chr5	29650265	29650266	chunk0149_426_1	36.8767	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	29650141	29650605	-151887654	+	L1MA5	LINE	L1	5864	6300	0	3
chr5	29686149	29686150	chunk0149_428_1	20.63689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	29685960	29686769	-151851490	-	MLT1A0-int	LTR	ERVL-MaLR	0	1735	742	3
chr5	29686881	29686882	chunk0149_429_1	15.5317	AR_DHT_Control	chr5	29686763	29686993	-151851266	+	MLT1A0	LTR	ERVL-MaLR	125	363	-2	3
chr5	29697037	29697038	chunk0149_431_1	19.20333	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	29696995	29697259	-151841000	-	L1MC3	LINE	L1	-678	7525	7249	3
chr5	29707136	29707137	chunk0149_433_1	22.47926	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	29706915	29707187	-151831072	-	MLT2C1	LTR	ERVL	-89	308	1	3
chr5	29791043	29791044	chunk0149_440_1	11.9014	AR_DHT_Control	chr5	29791025	29791218	-151747041	+	MLT2B4	LTR	ERVL	1	193	-363	3
chr5	29804429	29804430	chunk0149_441_1	129.4818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	29801381	29804459	-151733800	+	L1MC2	LINE	L1	3656	6819	-23	3
chr5	29817575	29817576	chunk0149_443_1	31.04075	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	29817518	29817703	-151720556	+	MER58A	DNA	hAT-Charlie	37	224	0	3
chr5	29913751	29913752	chunk0149_448_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	29913249	29914420	-151623839	+	L1PA13	LINE	L1	11	1258	-5527	3
chr5	29949510	29949511	chunk0149_449_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	29949136	29949766	-151588493	-	MER70B	LTR	ERVL	-1	577	5	3
chr5	29955693	29955694	chunk0149_451_1	58.5549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	29955403	29955702	-151582557	+	LTR86B2	LTR	ERVL	102	400	-87	3
chr5	29960985	29960986	chunk0149_453_1	44.98804	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	29959222	29962025	-151576234	+	L1M1	LINE	L1	15	2921	-4644	3
chr5	29993595	29993596	chunk0149_454_1	4.67225	AR_DHT_Control	chr5	29993333	29993695	-151544564	-	L2	LINE	L2	-974	2445	2065	3
chr5	30002116	30002117	chunk0149_455_1	52.6248	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	30001615	30003503	-151534756	+	L1MCa	LINE	L1	1351	3343	-3221	3
chr5	30046010	30046011	chunk0149_459_1	16.2346	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	30045985	30046151	-151492108	+	MIR	SINE	MIR	67	262	0	3
chr5	30207447	30207448	chunk0150_2_1	30.78635	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	30206315	30207535	-151330724	+	ERVL-B4-int	LTR	ERVL	4344	5608	-106	3
chr5	30240014	30240015	chunk0150_6_1	47.57494	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	30239509	30240108	-151298151	+	LTR28C	LTR	ERV1	3	634	-2	3
chr5	30499214	30499215	chunk0150_13_1	95.8027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	30496098	30499978	-151038281	-	L1PA6	LINE	L1	-2271	3875	5	3
chr5	30542271	30542272	chunk0150_16_1	5.41601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	30541200	30545829	-150992430	+	L1MA3	LINE	L1	3134	7724	0	3
chr5	30569091	30569092	chunk0150_17_1	6.43609	AR_DHT_Control	chr5	30568991	30569121	-150969138	+	L2a	LINE	L2	3105	3227	-199	3
chr5	30605931	30605932	chunk0150_21_1	42.4563	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	30605838	30606952	-150931307	-	L2	LINE	L2	-350	3069	1880	3
chr5	30665792	30665793	chunk0150_24_1	9.21264	AR_DHT_Control	chr5	30665659	30665919	-150872340	+	L2a	LINE	L2	3190	3425	-1	3
chr5	31095935	31095936	chunk0150_31_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	31095923	31096146	-150442113	+	MER58A	DNA	hAT-Charlie	1	223	-1	3
chr5	31416384	31416385	chunk0150_36_1	16.2816	AR_DHT_Control	chr5	31416376	31416799	-150121460	-	L2b	LINE	L2	-4	3371	2916	3
chr5	31491337	31491338	chunk0150_42_1	33.95726	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	31491262	31491452	-150046807	-	MIR	SINE	MIR	-23	245	35	3
chr5	31534790	31534791	chunk0150_43_1	9.88994	AR_DHT_Control	chr5	31534730	31534900	-150003359	+	FAM	SINE	Alu	1	180	-5	3
chr5	31674438	31674439	chunk0150_46_1	11.2788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	31674215	31674539	-149863720	+	Charlie18a	DNA	hAT-Charlie	11	342	0	3
chr5	31683639	31683640	chunk0150_47_1	43.5278	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	31683577	31683992	-149854267	-	L1ME4b	LINE	L1	-247	645	219	3
chr5	31684809	31684810	chunk0150_49_1	31.9056	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	31684153	31685032	-149853227	+	L2a	LINE	L2	2372	3399	-27	3
chr5	31733760	31733761	chunk0150_50_1	9.21264	AR_DHT_Control	chr5	31733500	31733768	-149804491	+	MLT1K	LTR	ERVL-MaLR	203	496	-99	3
chr5	31895487	31895488	chunk0150_57_1	16.6858	AR_DHT_Control	chr5	31895209	31895561	-149642698	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	3
chr5	31990997	31990998	chunk0150_59_1	53.91269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	31990649	31991033	-149547226	-	L2a	LINE	L2	0	3426	3024	3
chr5	32153881	32153882	chunk0150_73_1	14.9998	AR_DHT_Control	chr5	32153409	32154268	-149383991	+	L1MC5a	LINE	L1	918	1793	-984	3
chr5	32312875	32312876	chunk0150_89_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	32312854	32312914	-149225345	+	(GCG)n	Simple_repeat	Simple_repeat	1	60	0	3
chr5	32424650	32424651	chunk0150_94_1	70.2626	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	32424648	32424921	-149113338	+	HAL1ME	LINE	L1	1872	2177	-288	3
chr5	32428699	32428700	chunk0150_95_1	5.95209	AR_DHT_Control	chr5	32428644	32428701	-149109558	-	MER5C1	DNA	hAT-Charlie	-204	59	4	3
chr5	32615467	32615468	chunk0150_102_1	13.84188	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	32615225	32615508	-148922751	-	L1MC4a	LINE	L1	-258	7624	7313	3
chr5	32889315	32889316	chunk0150_114_1	25.64991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	32888893	32889409	-148648850	+	L2a	LINE	L2	2844	3426	0	3
chr5	32935408	32935409	chunk0150_118_1	38.7822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	32935351	32935421	-148602838	-	L2c	LINE	L2	-9	3378	3315	3
chr5	33050092	33050093	chunk0150_122_1	7.43227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	33049026	33055088	-148483171	+	L1M2a	LINE	L1	399	6374	-1185	3
chr5	33317626	33317627	chunk0150_132_1	21.1067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	33317061	33317858	-148220401	+	L1ME3B	LINE	L1	5188	5975	-267	3
chr5	33487430	33487431	chunk0150_137_1	274.6475	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	33487283	33487640	-148050619	+	LTR24C	LTR	ERV1	248	633	-2	3
chr5	33959803	33959804	chunk0150_155_1	39.4111	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	33959770	33959904	-147578355	+	MamRep434	DNA	TcMar-Tigger	39	187	-239	3
chr5	34010481	34010482	chunk0150_164_1	6.46845	AR_DHT_Control	chr5	34010456	34010894	-147527365	+	L1MA4A	LINE	L1	5669	6135	-168	3
chr5	34246025	34246026	chunk0150_171_1	45.4186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	34246025	34246133	-147292126	-	MER110	LTR	ERV1	-298	170	74	3
chr5	34444975	34444976	chunk0150_172_1	91.6339	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	34443391	34445617	-147092642	-	L1PA7	LINE	L1	0	4873	2638	3
chr5	34447570	34447571	chunk0150_173_1	7.26342	AR_DHT_Control	chr5	34445652	34448252	-147090007	-	L1PA7	LINE	L1	-3824	2637	8	3
chr5	34450589	34450590	chunk0150_174_1	14.24449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	34450525	34450670	-147087589	-	MER70C	LTR	ERVL	-31	500	351	3
chr5	34468608	34468609	chunk0150_176_1	4.83532	AR_DHT_Control	chr5	34468582	34468784	-147069475	-	MER4-int	LTR	ERV1	-4024	991	783	3
chr5	34526609	34526610	chunk0150_183_1	29.2853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	34526444	34526781	-147011478	-	MER2	DNA	TcMar-Tigger	0	345	1	3
chr5	34532627	34532628	chunk0150_184_1	8.31466	AR_DHT_Control	chr5	34532604	34532770	-147005489	+	MER115	DNA	hAT-Tip100	526	692	-1	3
chr5	34551135	34551136	chunk0150_185_1	6.73207	AR_DHT_Control	chr5	34550934	34551179	-146987080	+	MIR	SINE	MIR	20	262	0	3
chr5	34707096	34707097	chunk0150_191_1	22.13847	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	34707094	34707184	-146831075	+	MIRb	SINE	MIR	56	158	-50	3
chr5	34843926	34843927	chunk0150_197_1	14.88685	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	34843816	34844141	-146694118	-	L2c	LINE	L2	0	3387	3077	3
chr5	34900930	34900931	chunk0150_200_1	13.8249	AR_DHT_Control	chr5	34900528	34901315	-146636944	-	Tigger2b_Pri	DNA	TcMar-Tigger	-249	819	1	3
chr5	35095044	35095045	chunk0150_205_1	5.70279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	35094824	35095127	-146443132	-	AluJb	SINE	Alu	-9	303	2	3
chr5	35168771	35168772	chunk0150_209_1	8.93364	AR_DHT_Control	chr5	35168683	35170417	-146367842	-	MamGypsy2-I	LTR	Gypsy	-1922	2244	220	3
chr5	35211336	35211337	chunk0150_214_1	8.35541	AR_DHT_Control	chr5	35211318	35211493	-146326766	+	X6A_LINE	LINE	CR1	534	712	-368	3
chr5	35442178	35442179	chunk0150_222_1	20.79484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	35440617	35442903	-146095356	+	L1MC3	LINE	L1	5865	8203	0	3
chr5	35890303	35890304	chunk0150_233_1	77.34962	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	35890222	35890328	-145647931	-	MER21C	LTR	ERVL	-100	838	730	3
chr5	35998013	35998014	chunk0150_236_1	9.76623	AR_DHT_Control	chr5	35997724	35998954	-145539305	+	PRIMA4-int	LTR	ERV1	3729	4943	-3327	3
chr5	36017204	36017205	chunk0150_237_1	19.9365	AR_DHT_Control	chr5	36016948	36017511	-145520748	+	MLT1E1	LTR	ERVL-MaLR	70	654	0	3
chr5	36033609	36033610	chunk0150_238_1	67.8845	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	36033210	36033622	-145504637	+	MER70A	LTR	ERVL	55	472	0	3
chr5	36046377	36046378	chunk0150_240_1	8.02791	AR_DHT_Control	chr5	36045628	36046806	-145491453	+	L1MA3	LINE	L1	6433	7618	-106	3
chr5	36273927	36273928	chunk0150_247_1	5.86499	AR_DHT_Control	chr5	36273836	36274205	-145264054	+	MER57B2	LTR	ERV1	1	403	0	3
chr5	36286138	36286139	chunk0150_248_1	236.3239	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	36285579	36286304	-145251955	+	LTR82A	LTR	ERVL	2	857	-15	3
chr5	36288169	36288170	chunk0150_251_1	13.5462	AR_DHT_Control	chr5	36288033	36290116	-145248143	-	L1ME2	LINE	L1	-8	6156	3906	3
chr5	36373663	36373664	chunk0150_258_1	84.9618	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	36373622	36373857	-145164402	-	L2c	LINE	L2	-364	3055	2820	3
chr5	36777204	36777205	chunk0150_268_1	8.58634	AR_DHT_Control	chr5	36777087	36777799	-144760460	+	L1MEc	LINE	L1	49	792	-5608	3
chr5	36864883	36864884	chunk0150_272_1	116.1801	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	36864418	36865701	-144672558	-	L1MB8	LINE	L1	0	6178	4903	3
chr5	36876661	36876662	chunk0150_273_1	5.23393	AR_DHT_Control	chr5	36876604	36876685	-144661574	+	(CGG)n	Simple_repeat	Simple_repeat	1	85	0	3
chr5	36936528	36936529	chunk0150_275_1	55.8121	AR_DHT_Control	chr5	36936264	36936597	-144601662	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr5	36948249	36948250	chunk0150_276_1	20.7218	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	36948161	36948258	-144590001	+	L2a	LINE	L2	3322	3419	-7	3
chr5	36949479	36949480	chunk0150_279_1	17.89602	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	36949378	36949555	-144588704	+	MIR	SINE	MIR	38	262	0	3
chr5	37029186	37029187	chunk0150_282_1	10.8017	AR_DHT_Control	chr5	37029148	37029761	-144508498	-	L1ME1	LINE	L1	-56	6108	5443	3
chr5	37040639	37040640	chunk0150_283_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	37040520	37041065	-144497194	-	L1ME3Cz	LINE	L1	-417	580	1	3
chr5	37074028	37074029	chunk0150_286_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	37073790	37074113	-144464146	-	HAL1	LINE	L1	-59	2448	2079	3
chr5	37214653	37214654	chunk0150_287_1	8.27376	AR_DHT_Control	chr5	37214487	37215049	-144323210	+	Tigger2b_Pri	DNA	TcMar-Tigger	273	828	-240	3
chr5	37254820	37254821	chunk0150_289_1	41.2373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	37254676	37255097	-144283162	+	MER65-int	LTR	ERV1	83	571	-4300	3
chr5	37401906	37401907	chunk0150_295_1	5.69226	AR_DHT_Control	chr5	37401794	37402293	-144135966	-	L1MA5	LINE	L1	-2	6298	5793	3
chr5	37429797	37429798	chunk0150_296_1	8.46929	AR_DHT_Control	chr5	37429133	37430111	-144108148	-	L1ME1	LINE	L1	-792	5387	4381	3
chr5	37494972	37494973	chunk0150_297_1	7.96057	AR_DHT_Control	chr5	37494899	37495115	-144043144	+	MER58A	DNA	hAT-Charlie	4	224	0	3
chr5	37501245	37501246	chunk0150_298_1	46.8843	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	37501038	37501402	-144036857	-	L1PB3	LINE	L1	-773	5373	5006	3
chr5	37549526	37549527	chunk0150_299_1	22.35061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	37547496	37549857	-143988402	-	L1MA2	LINE	L1	0	7723	5360	3
chr5	37649375	37649376	chunk0150_301_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	37649354	37649377	-143888882	+	(TTTA)n	Simple_repeat	Simple_repeat	1	23	0	3
chr5	37667981	37667982	chunk0150_303_1	5.10868	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	37667863	37668001	-143870258	+	MER103C	DNA	hAT-Charlie	64	205	-92	3
chr5	37741433	37741434	chunk0150_309_1	6.48293	AR_DHT_Control	chr5	37741412	37741746	-143796513	-	MER1B	DNA	hAT-Charlie	0	339	1	3
chr5	38515208	38515209	chunk0150_332_1	7.86105	AR_DHT_Control	chr5	38515136	38515320	-143022939	+	Charlie17a	DNA	hAT-Charlie	26	213	-4	3
chr5	38521694	38521695	chunk0150_333_1	8.52761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	38521475	38522150	-143016109	-	L1MA4A	LINE	L1	-5460	1389	703	3
chr5	38542841	38542842	chunk0150_334_1	7.83165	AR_DHT_Control	chr5	38542621	38542879	-142995380	+	L2c	LINE	L2	2925	3168	-207	3
chr5	38565988	38565989	chunk0150_340_1	26.53672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	38565909	38565994	-142972265	-	L2c	LINE	L2	-9	3378	3293	3
chr5	38600663	38600664	chunk0150_342_1	37.20478	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	38600461	38600795	-142937464	+	L2	LINE	L2	1977	2311	-1108	3
chr5	38907803	38907804	chunk0150_359_1	8.64577	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	38907139	38910728	-142627531	+	L1PA16	LINE	L1	105	3626	-3140	3
chr5	38979703	38979704	chunk0150_360_1	63.5705	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	38979543	38979765	-142558494	-	MLT1F	LTR	ERVL-MaLR	-54	494	258	3
chr5	39049456	39049457	chunk0150_364_1	14.21396	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	39049370	39049588	-142488671	-	MER58A	DNA	hAT-Charlie	-2	222	1	3
chr5	39055599	39055600	chunk0150_365_1	12.8531	AR_DHT_Control	chr5	39055090	39055630	-142482629	+	L2a	LINE	L2	2766	3419	-7	3
chr5	39056132	39056133	chunk0150_366_1	5.18121	AR_DHT_Control	chr5	39055763	39056169	-142482090	-	L2	LINE	L2	-626	2793	2333	3
chr5	39178288	39178289	chunk0150_374_1	7.80475	AR_DHT_Control	chr5	39178060	39178320	-142359939	-	MER103C	DNA	hAT-Charlie	0	297	36	3
chr5	39606057	39606058	chunk0150_384_1	21.35532	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	39605534	39606106	-141932153	-	L1MC3	LINE	L1	-2031	5754	5186	3
chr5	39639693	39639694	chunk0150_388_1	37.7038	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	39639498	39639720	-141898539	-	MER58A	DNA	hAT-Charlie	-1	223	1	3
chr5	39808368	39808369	chunk0150_396_1	8.95381	AR_DHT_Control	chr5	39808175	39808400	-141729859	-	ERV3-16A3_I-int	LTR	ERVL	-1422	3804	3576	3
chr5	39829620	39829621	chunk0150_397_1	9.15979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	39829600	39829653	-141708606	-	MIRc	SINE	MIR	-88	180	134	3
chr5	39832029	39832030	chunk0150_399_1	16.1221	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	39831145	39832822	-141705437	-	L1ME2z	LINE	L1	-182	6262	4497	3
chr5	40254294	40254295	chunk0150_414_1	22.0387	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	40253965	40254393	-141283866	+	L2a	LINE	L2	2958	3421	-5	3
chr5	40348568	40348569	chunk0150_419_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	40347974	40350398	-141187861	+	L1MA2	LINE	L1	2	2388	-4461	3
chr5	40366153	40366154	chunk0150_420_1	33.8549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	40364922	40366287	-141171972	+	ERVL-B4-int	LTR	ERVL	4329	5712	-2	3
chr5	40396604	40396605	chunk0150_429_1	5.77762	AR_DHT_Control	chr5	40396540	40396741	-141141518	+	MIRb	SINE	MIR	31	252	-16	3
chr5	40431893	40431894	chunk0150_435_1	23.4019	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	40431882	40431920	-141106339	+	(TG)n	Simple_repeat	Simple_repeat	1	38	0	3
chr5	40472118	40472119	chunk0150_436_1	160.4148	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	40468742	40474889	-141063370	-	L1PA3	LINE	L1	-3	6152	5	3
chr5	40581151	40581152	chunk0150_445_1	29.14373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	40580602	40581462	-140956797	-	L1MA7	LINE	L1	-863	5280	4423	3
chr5	40650008	40650009	chunk0150_448_1	122.3333	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	40649823	40651114	-140887145	+	MER21-int	LTR	ERVL	2912	4191	0	3
chr5	40669820	40669821	chunk0150_451_1	35.33581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	40669779	40669899	-140868360	+	MIRb	SINE	MIR	116	245	-23	3
chr5	40690425	40690426	chunk0151_3_1	7.8637	AR_DHT_Control	chr5	40690418	40690555	-140847704	+	L2c	LINE	L2	2974	3112	-275	3
chr5	40775697	40775698	chunk0151_5_1	20.4662	AR_DHT_Control	chr5	40775545	40776521	-140761738	-	L2a	LINE	L2	0	3426	2307	3
chr5	40896173	40896174	chunk0151_9_1	47.16709	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	40895383	40898205	-140640054	+	L1P2	LINE	L1	9	2842	-3304	3
chr5	41297717	41297718	chunk0151_15_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	41297256	41297912	-140240347	+	LTR41	LTR	ERVL	1	652	-116	3
chr5	41316021	41316022	chunk0151_16_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	41315468	41318015	-140220244	+	L1MA1	LINE	L1	15	2635	-4930	3
chr5	41609493	41609494	chunk0151_23_1	13.2288	AR_DHT_Control	chr5	41604728	41609541	-139928718	-	L1PA5	LINE	L1	0	6154	1356	3
chr5	41755889	41755890	chunk0151_25_1	66.0664	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	41755740	41756058	-139782201	+	L1M4	LINE	L1	2025	2342	-5175	3
chr5	41833107	41833108	chunk0151_34_1	86.9193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	41832364	41833777	-139704482	+	L1M1	LINE	L1	1756	3272	-4293	3
chr5	41908402	41908403	chunk0151_35_1	10.6083	AR_DHT_Control	chr5	41908398	41908445	-139629814	-	MIRc	SINE	MIR	-14	254	208	3
chr5	41969343	41969344	chunk0151_36_1	6.98475	AR_DHT_Control	chr5	41969259	41969422	-139568837	-	L1ME3B	LINE	L1	-41	6201	6035	3
chr5	42015107	42015108	chunk0151_39_1	7.23138	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42015033	42015444	-139522815	+	Zaphod3	DNA	hAT-Tip100	1	404	-2219	3
chr5	42108633	42108634	chunk0151_42_1	26.32994	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	42108273	42108651	-139429608	+	L2b	LINE	L2	3074	3424	-2	3
chr5	42215969	42215970	chunk0151_44_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	42211871	42216458	-139321801	-	L1MA1	LINE	L1	-2760	4805	15	3
chr5	42267323	42267324	chunk0151_45_1	8.66151	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42267312	42267548	-139270711	-	HAL1b	LINE	L1	-1076	1345	1085	3
chr5	42360219	42360220	chunk0151_47_1	10.7541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42360184	42360368	-139177891	+	Tigger16a	DNA	TcMar-Tigger	752	957	0	3
chr5	42415668	42415669	chunk0151_49_1	56.0825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42412311	42418555	-139119704	-	L1PA6	LINE	L1	0	6154	7	3
chr5	42461709	42461710	chunk0151_55_1	303.2249	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	42461507	42461738	-139076521	+	L2c	LINE	L2	3121	3341	-46	3
chr5	42603671	42603672	chunk0151_72_1	24.22742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	42603657	42604478	-138933781	-	MER21A	LTR	ERVL	-19	912	179	3
chr5	42638443	42638444	chunk0151_76_1	22.0071	AR_DHT_Control	chr5	42638373	42638706	-138899553	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	3
chr5	42677679	42677680	chunk0151_77_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42677609	42677825	-138860434	+	MER30	DNA	hAT-Charlie	1	226	-4	3
chr5	42763213	42763214	chunk0151_79_1	30.1156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42762943	42763778	-138774481	+	L1MC3	LINE	L1	6637	7495	-290	3
chr5	42787997	42787998	chunk0151_80_1	8.52761	AR_DHT_Control	chr5	42787476	42788297	-138749962	-	L1PA17	LINE	L1	-3583	3266	2483	3
chr5	42854020	42854021	chunk0151_88_1	76.3354	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42853912	42854300	-138683959	-	LTR16E1	LTR	ERVL	-34	504	103	3
chr5	42891198	42891199	chunk0151_92_1	23.5752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	42890679	42891310	-138646949	-	L1MC5a	LINE	L1	-426	2351	1640	3
chr5	42891843	42891844	chunk0151_93_1	20.54697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	42891768	42891879	-138646380	-	MER87B	LTR	ERV1	-400	109	1	3
chr5	43077184	43077185	chunk0151_95_1	13.1909	AR_DHT_Control	chr5	43077021	43078006	-138460253	-	LTR5B	LTR	ERVK	0	1002	1	3
chr5	43138159	43138160	chunk0151_98_1	6.48643	AR_DHT_Control	chr5	43136785	43138244	-138400015	+	L1MB1	LINE	L1	4718	6166	-2	3
chr5	43274931	43274932	chunk0151_100_1	19.85346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	43274765	43274959	-138263300	-	MamRep434	DNA	TcMar-Tigger	-152	274	78	3
chr5	43326278	43326279	chunk0151_103_1	7.36432	AR_DHT_Control	chr5	43322897	43329010	-138209249	-	L1PA6	LINE	L1	-5	6149	5	3
chr5	43418729	43418730	chunk0151_106_1	20.799	AR_DHT_Control	chr5	43418642	43418739	-138119520	-	L2b	LINE	L2	-31	3344	3249	3
chr5	43572693	43572694	chunk0151_116_1	4.84918	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	43571512	43574022	-137964237	-	LTR49-int	LTR	ERV1	-87	6244	3774	3
chr5	43627195	43627196	chunk0151_117_1	10.20249	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	43626972	43627252	-137911007	-	MLT1L	LTR	ERVL-MaLR	-21	589	280	3
chr5	43785447	43785448	chunk0151_122_1	23.6354	AR_DHT_Control	chr5	43785410	43785527	-137752732	-	MIR3	SINE	MIR	-69	139	30	3
chr5	43787772	43787773	chunk0151_123_1	7.27655	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	43786860	43789513	-137748746	+	HERVH-int	LTR	ERV1	1	2992	-4721	3
chr5	43839409	43839410	chunk0151_124_1	20.7965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	43839385	43839479	-137698780	+	MIRc	SINE	MIR	172	265	-3	3
chr5	43909347	43909348	chunk0151_127_1	11.1716	AR_DHT_Control	chr5	43908700	43910557	-137627702	+	L1P2	LINE	L1	1	1864	-4320	3
chr5	43982678	43982679	chunk0151_128_1	8.95381	AR_DHT_Control	chr5	43982347	43982766	-137555493	-	ERVL-B4-int	LTR	ERVL	-1523	4191	3735	3
chr5	45027163	45027164	chunk0151_138_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	45027147	45027312	-136510947	-	MER57F	LTR	ERV1	0	435	269	3
chr5	45134588	45134589	chunk0151_139_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	45134514	45135053	-136403206	-	MER34B	LTR	ERV1	0	565	1	3
chr5	45247181	45247182	chunk0151_140_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	45245545	45248025	-136290234	-	L1PA13	LINE	L1	-3946	2839	288	3
chr5	45784697	45784698	chunk0151_144_1	6.18774	AR_DHT_Control	chr5	45784347	45785051	-135753208	-	MER50B	LTR	ERV1	0	697	1	3
chr5	45861312	45861313	chunk0151_145_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	45861232	45861486	-135676773	+	L1MEh	LINE	L1	1498	1896	-823	3
chr5	49599670	49599671	chunk0151_151_1	165.1795	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49599387	49600983	-131937276	+	BSR/Beta	Satellite	Satellite	1	1593	-4	3
chr5	49601625	49601626	chunk0151_153_1	95.471	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49601091	49603131	-131935128	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	2051	0	3
chr5	49657761	49657762	chunk0151_158_1	67.1941	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
chr5	49658985	49658986	chunk0151_161_1	109.5162	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
chr5	49660999	49661000	chunk0151_164_1	21.67026	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
chr5	49661522	49661523	chunk0151_165_1	83.968	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	49656288	49661871	-131876388	+	(TCCAT)n	Simple_repeat	Simple_repeat	1	5681	0	3
chr5	49666502	49666503	chunk0151_168_1	28.23029	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	49666173	49667431	-131870828	+	(CATTC)n	Satellite	Satellite	1	1263	0	3
chr5	49666926	49666927	chunk0151_171_1	121.0649	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr5	49666173	49667431	-131870828	+	(CATTC)n	Satellite	Satellite	1	1263	0	3
chr5	50343890	50343891	chunk0151_177_1	71.9299	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	50343879	50344205	-131194054	+	MER70A	LTR	ERVL	80	425	-47	3
chr5	50346887	50346888	chunk0151_179_1	12.10879	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	50346783	50347000	-131191259	-	MER58A	DNA	hAT-Charlie	-3	221	1	3
chr5	50365977	50365978	chunk0151_183_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	50365638	50366779	-131171480	+	L1MB1	LINE	L1	241	1389	-4752	3
chr5	50420639	50420640	chunk0151_185_1	15.97886	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	50420475	50420712	-131117547	+	L2a	LINE	L2	3119	3358	-68	3
chr5	50582063	50582064	chunk0151_193_1	23.27842	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	50581541	50582861	-130955398	+	L1PA10	LINE	L1	4836	6164	-4	3
chr5	50587667	50587668	chunk0151_194_1	10.179	AR_DHT_Control	chr5	50587636	50587681	-130950578	+	(TTCTT)n	Simple_repeat	Simple_repeat	1	48	0	3
chr5	50725865	50725866	chunk0151_203_1	32.6972	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	50725820	50726001	-130812258	-	MamRTE1	LINE	RTE-BovB	-9	3803	3617	3
chr5	50879496	50879497	chunk0151_216_1	8.27376	AR_DHT_Control	chr5	50879427	50879680	-130658579	+	MER50	LTR	ERV1	2	248	-486	3
chr5	50889979	50889980	chunk0151_219_1	49.77988	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	50889422	50890487	-130647772	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	1	3
chr5	50943596	50943597	chunk0151_227_1	8.62865	AR_DHT_Control	chr5	50943518	50944774	-130593485	+	L1PB2	LINE	L1	5616	6864	-3	3
chr5	51048338	51048339	chunk0151_232_1	24.30223	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	51048301	51048434	-130489825	-	MIRc	SINE	MIR	-22	246	113	3
chr5	51073138	51073139	chunk0151_234_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	51071922	51073712	-130464547	-	L1M2	LINE	L1	-4221	2886	35	3
chr5	51183817	51183818	chunk0151_238_1	21.16033	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	51183799	51184480	-130353779	-	L2b	LINE	L2	-2	3373	2569	3
chr5	51846160	51846161	chunk0151_249_1	21.9318	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	51845862	51846394	-129691865	-	Tigger3b	DNA	TcMar-Tigger	-687	544	1	3
chr5	52124832	52124833	chunk0151_255_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	52124361	52126597	-129411662	+	L1MC1	LINE	L1	1386	3511	-2810	3
chr5	52460336	52460337	chunk0151_261_1	13.9612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	52459976	52460383	-129077876	-	MLT1J	LTR	ERVL-MaLR	-62	450	1	3
chr5	52548678	52548679	chunk0151_270_1	5.73469	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	52547980	52548864	-128989395	+	LTR1D1	LTR	ERV1	1	899	0	3
chr5	52725861	52725862	chunk0151_278_1	83.5097	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	52725819	52726086	-128812173	+	MamRTE1	LINE	RTE-BovB	3174	3439	-373	3
chr5	52817958	52817959	chunk0151_286_1	118.0646	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	52817843	52818078	-128720181	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr5	52891443	52891444	chunk0151_292_1	163.0363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	52891251	52891553	-128646706	-	L1ME2	LINE	L1	-163	6001	5696	3
chr5	52929119	52929120	chunk0151_297_1	9.31879	AR_DHT_Control	chr5	52929058	52929409	-128608850	-	MLT1A0	LTR	ERVL-MaLR	-2	363	1	3
chr5	53034989	53034990	chunk0151_302_1	4.5547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	53034951	53035091	-128503168	+	MIRc	SINE	MIR	104	251	-17	3
chr5	53337842	53337843	chunk0151_308_1	11.3142	AR_DHT_Control	chr5	53337733	53338239	-128200020	+	ERV3-16A3_I-int	LTR	ERVL	3247	3743	-1483	3
chr5	53338447	53338448	chunk0151_309_1	24.54474	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	53338338	53338557	-128199702	-	L2c	LINE	L2	-40	3386	3123	3
chr5	53569541	53569542	chunk0151_320_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	53569469	53569560	-127968699	-	CR1-L3A_Croc	LINE	CR1	0	4288	4202	3
chr5	53599237	53599238	chunk0151_321_1	31.8825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	53599173	53599646	-127938613	-	L1M2	LINE	L1	-426	5754	5246	3
chr5	53604651	53604652	chunk0151_322_1	8.64577	AR_DHT_Control	chr5	53604430	53604915	-127933344	+	L2b	LINE	L2	2622	3138	-237	3
chr5	53744101	53744102	chunk0151_326_1	26.3202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	53739106	53744665	-127793594	+	L1PB1	LINE	L1	892	6506	-361	3
chr5	53751056	53751057	chunk0151_327_1	11.9876	AR_DHT_Control	chr5	53750516	53751979	-127786280	+	L1PA6	LINE	L1	5	1535	-4649	3
chr5	53754149	53754150	chunk0151_328_1	60.3087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	53752969	53755778	-127782481	+	L1PA6	LINE	L1	1531	4332	-1814	3
chr5	53822321	53822322	chunk0151_332_1	5.95444	AR_DHT_Control	chr5	53822263	53822337	-127715922	+	MLT1K	LTR	ERVL-MaLR	173	247	-348	3
chr5	54279566	54279567	chunk0151_342_1	8.82835	AR_DHT_Control	chr5	54279282	54279629	-127258630	-	MLT1A	LTR	ERVL-MaLR	-18	356	18	3
chr5	54296545	54296546	chunk0151_343_1	29.174	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54296500	54296587	-127241672	-	L2c	LINE	L2	-9	3378	3300	3
chr5	54384111	54384112	chunk0151_349_1	30.24146	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54383842	54384266	-127153993	-	LTR24	LTR	ERV1	0	467	10	3
chr5	54604172	54604173	chunk0151_355_1	8.09329	AR_DHT_Control	chr5	54604140	54604202	-126934057	+	L1M3	LINE	L1	5562	5627	-615	3
chr5	54656340	54656341	chunk0151_356_1	26.973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54655873	54656445	-126881814	-	MER90a	LTR	ERV1	-5	609	1	3
chr5	54720088	54720089	chunk0151_359_1	105.6326	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54719913	54720095	-126818164	-	MIR3	SINE	MIR	-22	186	8	3
chr5	54720088	54720089	chunk0151_359_1	105.6326	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54720066	54720147	-126818112	+	L2b	LINE	L2	3281	3375	0	3
chr5	54739114	54739115	chunk0151_361_1	25.97201	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	54739045	54739474	-126798785	+	MLT1C	LTR	ERVL-MaLR	5	465	-2	3
chr5	54915813	54915814	chunk0151_367_1	57.6035	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	54915671	54916015	-126622244	+	LTR40A1	LTR	ERVL	24	357	-227	3
chr5	55250399	55250400	chunk0151_384_1	14.02436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55250106	55250487	-126287772	-	L1MA9	LINE	L1	-2	6310	5903	3
chr5	55452519	55452520	chunk0151_397_1	14.5159	AR_DHT_Control	chr5	55452133	55452543	-126085716	+	MSTB	LTR	ERVL-MaLR	1	426	0	3
chr5	55527065	55527066	chunk0151_400_1	48.5614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55526978	55527089	-126011170	+	L2b	LINE	L2	3269	3375	0	3
chr5	55573957	55573958	chunk0151_404_1	14.82681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	55573935	55573981	-125964278	-	LTR37B	LTR	ERV1	-205	263	227	3
chr5	55620191	55620192	chunk0151_409_1	56.732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55620155	55620245	-125918014	+	L2b	LINE	L2	3276	3373	-2	3
chr5	55629860	55629861	chunk0151_411_1	6.25666	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	55629418	55630305	-125907954	+	Charlie1a	DNA	hAT-Charlie	271	1199	-256	3
chr5	55635270	55635271	chunk0151_412_1	9.7346	AR_DHT_Control	chr5	55635254	55635486	-125902773	-	MIRb	SINE	MIR	0	268	7	3
chr5	55681789	55681790	chunk0151_419_1	12.511	AR_DHT_Control	chr5	55681779	55682009	-125856250	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr5	55728097	55728098	chunk0151_425_1	8.62581	AR_DHT_Control	chr5	55727994	55728379	-125809880	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	3
chr5	55729465	55729466	chunk0151_426_1	6.65967	AR_DHT_Control	chr5	55729219	55729702	-125808557	-	L1MC4	LINE	L1	-137	7905	7405	3
chr5	55866737	55866738	chunk0151_431_1	5.69781	AR_DHT_Control	chr5	55866660	55866893	-125671366	-	LTR81A	LTR	Gypsy	-754	596	149	3
chr5	56098103	56098104	chunk0152_3_1	23.50249	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	56098030	56098122	-125440137	+	MLT1I	LTR	ERVL-MaLR	65	155	-256	3
chr5	56138475	56138476	chunk0152_4_1	9.74833	AR_DHT_Control	chr5	56138425	56139178	-125399081	+	L1MC1	LINE	L1	5760	6499	-9	3
chr5	56357599	56357600	chunk0152_16_1	10.0307	AR_DHT_Control	chr5	56357581	56357628	-125180631	+	GA-rich	Low_complexity	Low_complexity	1	48	0	3
chr5	56378977	56378978	chunk0152_17_1	34.3288	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	56378831	56380598	-125157661	+	L1MCa	LINE	L1	3	1724	-4784	3
chr5	56489479	56489480	chunk0152_22_1	7.58612	AR_DHT_Control	chr5	56489372	56489607	-125048652	-	MIRb	SINE	MIR	-8	260	3	3
chr5	56641214	56641215	chunk0152_24_1	41.00478	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	56641189	56641595	-124896664	+	MLT1J1	LTR	ERVL-MaLR	28	444	0	3
chr5	56727168	56727169	chunk0152_26_1	17.3051	AR_DHT_Control	chr5	56726938	56727226	-124811033	+	L2a	LINE	L2	3108	3426	0	3
chr5	56815297	56815298	chunk0152_27_1	6.44773	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	56815265	56815329	-124722930	+	(CGCCTC)n	Simple_repeat	Simple_repeat	1	67	0	3
chr5	56849907	56849908	chunk0152_31_1	31.3164	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	56849846	56850037	-124688222	+	MIRb	SINE	MIR	24	230	-38	3
chr5	57014304	57014305	chunk0152_38_1	5.28628	AR_DHT_Control	chr5	57013847	57014651	-124523608	+	L1MEc	LINE	L1	2351	3151	-3168	3
chr5	57034099	57034100	chunk0152_39_1	11.3289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57033796	57034149	-124504110	+	L1ME4a	LINE	L1	5585	5930	-194	3
chr5	57189889	57189890	chunk0152_42_1	17.37352	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57189557	57190109	-124348150	+	L2c	LINE	L2	2698	3368	-58	3
chr5	57232531	57232532	chunk0152_44_1	8.02791	AR_DHT_Control	chr5	57232266	57232868	-124305391	+	LTR10C	LTR	ERV1	1	591	0	3
chr5	57338742	57338743	chunk0152_49_1	8.02791	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57338568	57338799	-124199460	+	MIRb	SINE	MIR	5	268	0	3
chr5	57499632	57499633	chunk0152_54_1	9.00866	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57499627	57499650	-124038609	+	(AAAC)n	Simple_repeat	Simple_repeat	1	23	0	3
chr5	57561960	57561961	chunk0152_55_1	13.6482	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57561191	57562810	-123975449	+	L2a	LINE	L2	436	2199	-1220	3
chr5	57650481	57650482	chunk0152_56_1	11.4948	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	57649533	57650593	-123887666	-	L1PB4	LINE	L1	-4535	2318	1388	3
chr5	57759396	57759397	chunk0152_62_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57759380	57761493	-123776766	-	L2a	LINE	L2	-2	3424	1349	3
chr5	57797982	57797983	chunk0152_64_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	57797951	57798130	-123740129	+	MIR	SINE	MIR	11	260	-2	3
chr5	58024320	58024321	chunk0152_67_1	5.86499	AR_DHT_Control	chr5	58024271	58024412	-123513847	+	MamRep1879	DNA	hAT-Tip100?	7	138	-78	3
chr5	58039045	58039046	chunk0152_68_1	31.80763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58038147	58039775	-123498484	+	L1MC3	LINE	L1	6041	7753	-32	3
chr5	58090860	58090861	chunk0152_79_1	6.66755	AR_DHT_Control	chr5	58089749	58090958	-123447301	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	3
chr5	58234976	58234977	chunk0152_92_1	38.7323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58234976	58235017	-123303242	+	A-rich	Low_complexity	Low_complexity	1	41	0	3
chr5	58260188	58260189	chunk0152_94_1	72.0195	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58260180	58260244	-123278015	-	MER53	DNA	hAT	0	193	129	3
chr5	58273834	58273835	chunk0152_96_1	31.1167	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58273822	58274247	-123264012	-	MSTB1	LTR	ERVL-MaLR	0	432	1	3
chr5	58416321	58416322	chunk0152_103_1	6.13843	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	58416044	58416540	-123121719	+	LTR33	LTR	ERVL	1	497	-18	3
chr5	58429106	58429107	chunk0152_104_1	4.88212	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	58428884	58429325	-123108934	-	LTR33A	LTR	ERVL	-2	529	21	3
chr5	58699451	58699452	chunk0152_118_1	123.1889	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	58693939	58700099	-122838160	-	L1PA6	LINE	L1	-7	6147	4	3
chr5	58761063	58761064	chunk0152_120_1	14.12058	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58761030	58761064	-122777195	+	(TC)n	Simple_repeat	Simple_repeat	1	34	0	3
chr5	58810283	58810284	chunk0152_124_1	190.2472	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	58810037	58810291	-122727968	-	LTR33A_	LTR	ERVL	-237	294	18	3
chr5	58843571	58843572	chunk0152_125_1	42.1897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58843442	58843623	-122694636	+	MamRep434	DNA	TcMar-Tigger	121	306	-120	3
chr5	58980327	58980328	chunk0152_132_1	18.96212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	58980234	58980375	-122557884	-	MIR	SINE	MIR	-105	157	10	3
chr5	59231623	59231624	chunk0152_147_1	262.4322	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	59231278	59231633	-122306626	+	MLT1J2	LTR	ERVL-MaLR	15	425	-23	3
chr5	59287556	59287557	chunk0152_149_1	5.6425	AR_DHT_Control	chr5	59287059	59289436	-122248823	+	L1MA3	LINE	L1	1099	3484	-4081	3
chr5	59304009	59304010	chunk0152_151_1	55.7037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	59302383	59306532	-122231727	-	L1PB1	LINE	L1	-4	6863	2681	3
chr5	59361663	59361664	chunk0152_155_1	33.93449	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	59361563	59361800	-122176459	+	L2c	LINE	L2	3133	3386	-1	3
chr5	59380909	59380910	chunk0152_157_1	178.1124	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	59380831	59381053	-122157206	+	MER58A	DNA	hAT-Charlie	2	221	-3	3
chr5	59617640	59617641	chunk0152_174_1	89.45485	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	59617420	59617842	-121920417	+	MLT1C	LTR	ERVL-MaLR	14	467	0	3
chr5	59715668	59715669	chunk0152_179_1	6.9834	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	59714826	59715703	-121822556	+	HERVL18-int	LTR	ERVL	2720	3579	-2468	3
chr5	59748882	59748883	chunk0152_180_1	32.3801	AR_DHT_Control	chr5	59748819	59749099	-121789160	+	MLT1F	LTR	ERVL-MaLR	227	525	-23	3
chr5	59840671	59840672	chunk0152_192_1	11.7415	AR_DHT_Control	chr5	59840518	59840865	-121697394	+	L3	LINE	CR1	3644	4037	-62	3
chr5	59894024	59894025	chunk0152_193_1	5.77762	AR_DHT_Control	chr5	59893996	59894030	-121644229	+	(GCAGCA)n	Simple_repeat	Simple_repeat	1	34	0	3
chr5	60243937	60243938	chunk0152_206_1	15.13838	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	60242066	60246094	-121292165	+	L1MA3	LINE	L1	3636	7723	-1	3
chr5	60304156	60304157	chunk0152_213_1	110.17293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	60304153	60304171	-121234088	-	L1PA11	LINE	L1	-3749	2397	2379	3
chr5	60326161	60326162	chunk0152_217_1	23.66538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	60325611	60326371	-121211888	-	L1MD1	LINE	L1	-14	6228	5452	3
chr5	60445973	60445974	chunk0152_226_1	9.91734	AR_DHT_Control	chr5	60445817	60446304	-121091955	+	L1M5	LINE	L1	5149	5667	-457	3
chr5	60544312	60544313	chunk0152_239_1	21.29851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	60544252	60544324	-120993935	+	L2c	LINE	L2	3305	3376	-11	3
chr5	60796484	60796485	chunk0152_247_1	11.052	AR_DHT_Control	chr5	60796354	60796571	-120741688	-	MER20	DNA	hAT-Charlie	0	219	1	3
chr5	60798899	60798900	chunk0152_248_1	89.2801	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	60798565	60799755	-120738504	+	L1M3	LINE	L1	2338	3570	-2570	3
chr5	60979923	60979924	chunk0152_260_1	10.2513	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	60978716	60980489	-120557770	+	L1M1	LINE	L1	507	2295	-5270	3
chr5	60996447	60996448	chunk0152_261_1	7.82111	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	60994569	60997057	-120541202	-	L1MA1	LINE	L1	-4788	2777	19	3
chr5	61123394	61123395	chunk0152_266_1	281.7269	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	61123268	61123566	-120414693	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr5	61174667	61174668	chunk0152_269_1	8.41723	AR_DHT_Control	chr5	61174440	61175092	-120363167	-	L1MC4	LINE	L1	-899	7143	6362	3
chr5	61298397	61298398	chunk0152_272_1	38.67913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	61298324	61298540	-120239719	-	MIR	SINE	MIR	-1	261	47	3
chr5	61439628	61439629	chunk0152_280_1	58.81575	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	61439575	61439803	-120098456	-	L1M5	LINE	L1	-419	5823	5586	3
chr5	61447175	61447176	chunk0152_282_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	61447126	61447709	-120090550	-	LOR1-int	LTR	ERV1	-6691	601	2	3
chr5	61583064	61583065	chunk0152_291_1	10.2513	AR_DHT_Control	chr5	61582935	61583104	-119955155	-	MLT1L	LTR	ERVL-MaLR	-14	596	412	3
chr5	61599958	61599959	chunk0152_293_1	22.54972	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	61599928	61600089	-119938170	+	MER121	DNA	hAT?	192	367	-34	3
chr5	61603573	61603574	chunk0152_294_1	20.64636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	61603130	61603748	-119934511	-	Tigger13a	DNA	TcMar-Tigger	-87	684	57	3
chr5	61775182	61775183	chunk0152_306_1	15.06	AR_DHT_Control	chr5	61775071	61775277	-119762982	+	MLT1K	LTR	ERVL-MaLR	20	248	-347	3
chr5	62024505	62024506	chunk0152_320_1	63.0402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	62022955	62026838	-119511421	-	L1P2	LINE	L1	-1692	4769	903	3
chr5	62035009	62035010	chunk0152_321_1	6.48643	AR_DHT_Control	chr5	62031675	62038116	-119500143	-	L1PA7	LINE	L1	0	6469	5	3
chr5	62146141	62146142	chunk0152_326_1	9.19836	AR_DHT_Control	chr5	62146046	62146212	-119392047	+	MIRc	SINE	MIR	13	189	-79	3
chr5	62433012	62433013	chunk0152_338_1	24.9017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	62432727	62433085	-119105174	-	L1MC4	LINE	L1	-544	7498	7184	3
chr5	62603871	62603872	chunk0152_345_1	6.40219	AR_DHT_Control	chr5	62603814	62604157	-118934102	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	3
chr5	62751532	62751533	chunk0152_349_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	62751187	62751692	-118786567	-	MLT1H	LTR	ERVL-MaLR	0	549	1	3
chr5	63146495	63146496	chunk0152_353_1	73.3213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	63145991	63148077	-118390182	+	L1ME3A	LINE	L1	3953	6158	-15	3
chr5	63400369	63400370	chunk0152_355_1	94.7914	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	63400077	63400502	-118137757	-	MER47B	DNA	TcMar-Tigger	0	418	1	3
chr5	63758008	63758009	chunk0152_359_1	10.9345	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	63757865	63758449	-117779810	+	LTR10C	LTR	ERV1	1	591	0	3
chr5	63770973	63770974	chunk0152_361_1	27.5368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	63770198	63771126	-117767133	-	L1MEc	LINE	L1	-5074	1326	399	3
chr5	63774010	63774011	chunk0152_362_1	23.86694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	63773899	63774273	-117763986	+	MLT2B4	LTR	ERVL	10	404	-10	3
chr5	64045377	64045378	chunk0152_365_1	11.9934	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64041442	64046242	-117492017	+	L1M1	LINE	L1	97	5020	-2545	3
chr5	64320535	64320536	chunk0152_369_1	7.10145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64320372	64320737	-117217522	+	HAL1ME	LINE	L1	592	988	-1477	3
chr5	64332254	64332255	chunk0152_370_1	48.6722	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64330713	64332259	-117206000	+	MER52A	LTR	ERV1	1	1755	0	3
chr5	64361034	64361035	chunk0152_374_1	24.72348	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64360666	64361119	-117177140	-	LTR40b	LTR	ERVL	0	462	1	3
chr5	64538943	64538944	chunk0152_383_1	21.36315	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	64538842	64539021	-116999238	-	L1ME1	LINE	L1	-274	5905	5726	3
chr5	64591895	64591896	chunk0152_384_1	7.3267	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64591836	64591935	-116946324	-	L2b	LINE	L2	-17	3358	3260	3
chr5	64654760	64654761	chunk0152_389_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64654486	64654775	-116883484	-	L1MC	LINE	L1	-1632	4514	4204	3
chr5	64706735	64706736	chunk0152_391_1	40.3036	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64706506	64708622	-116829637	-	MER4-int	LTR	ERV1	-2	6596	4421	3
chr5	64737211	64737212	chunk0152_393_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64737096	64738362	-116799897	+	L1M3	LINE	L1	2640	3923	-2217	3
chr5	64912319	64912320	chunk0152_401_1	70.2449	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	64912103	64912457	-116625802	+	L1ME3B	LINE	L1	565	911	-5331	3
chr5	64917652	64917653	chunk0152_403_1	10.1061	AR_DHT_Control	chr5	64917452	64917935	-116620324	+	MLT2B4	LTR	ERVL	1	483	-37	3
chr5	65143402	65143403	chunk0152_409_1	8.27376	AR_DHT_Control	chr5	65143328	65143452	-116394807	+	MARNA	DNA	TcMar-Mariner	411	534	-52	3
chr5	65430752	65430753	chunk0152_413_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	65430745	65431087	-116107172	+	L2c	LINE	L2	3003	3387	0	3
chr5	65497680	65497681	chunk0152_414_1	14.2911	AR_DHT_Control	chr5	65497386	65497689	-116040570	-	MLT1F2	LTR	ERVL-MaLR	-241	319	5	3
chr5	65651370	65651371	chunk0152_416_1	56.48047	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	65651139	65651386	-115886873	+	AluJr	SINE	Alu	2	288	-24	3
chr5	65748376	65748377	chunk0152_420_1	9.06199	AR_DHT_Control	chr5	65748266	65748477	-115789782	-	L2c	LINE	L2	-2338	1081	833	3
chr5	65925815	65925816	chunk0152_425_1	5.66005	AR_DHT_Control	chr5	65925813	65925888	-115612371	+	(CCCT)n	Simple_repeat	Simple_repeat	1	79	0	3
chr5	65948163	65948164	chunk0152_427_1	47.0851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	65948150	65948476	-115589783	-	AluJb	SINE	Alu	-1	311	2	3
chr5	65982882	65982883	chunk0152_430_1	193.8756	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	65982881	65983046	-115555213	+	L1ME2	LINE	L1	6141	6332	-5	3
chr5	66120762	66120763	chunk0152_437_1	14.3513	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	66120643	66120819	-115417440	+	MER3	DNA	hAT-Charlie	2	182	-27	3
chr5	66361287	66361288	chunk0152_446_1	21.42751	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	66361097	66361485	-115176774	-	MER57C2	LTR	ERV1	-4	430	1	3
chr5	66363310	66363311	chunk0152_447_1	126.8543	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	66363297	66365222	-115173037	-	Tigger1	DNA	TcMar-Tigger	-1	2417	469	3
chr5	66415395	66415396	chunk0152_452_1	8.15319	AR_DHT_Control	chr5	66415319	66415931	-115122328	+	L1MB7	LINE	L1	5546	6168	-16	3
chr5	66507359	66507360	chunk0152_455_1	60.4801	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	66506172	66507400	-115030859	-	ERVL-B4-int	LTR	ERVL	-99	5615	4355	3
chr5	66574307	66574308	chunk0152_458_1	71.8945	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	66574247	66574774	-114963485	-	L2a	LINE	L2	-19	3407	2856	3
chr5	66665341	66665342	chunk0153_2_1	10.18047	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	66665108	66665368	-114872891	-	L2a	LINE	L2	-1486	1933	1657	3
chr5	66703611	66703612	chunk0153_3_1	9.2275	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	66703574	66703671	-114834588	-	L1MB8	LINE	L1	0	6178	6082	3
chr5	66732503	66732504	chunk0153_4_1	58.2267	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	66731628	66732655	-114805604	+	L2c	LINE	L2	2245	3382	-5	3
chr5	66993610	66993611	chunk0153_19_1	6.13992	AR_DHT_Control	chr5	66993326	66993786	-114544473	-	L2c	LINE	L2	-14	3373	2911	3
chr5	67045839	67045840	chunk0153_23_1	8.87391	AR_DHT_Control	chr5	67045615	67046033	-114492226	-	LTR23	LTR	ERV1	0	437	1	3
chr5	67074081	67074082	chunk0153_27_1	6.69901	AR_DHT_Control	chr5	67074037	67074764	-114463495	+	L1ME4a	LINE	L1	5219	5976	-148	3
chr5	67118869	67118870	chunk0153_31_1	5.9324	AR_DHT_Control	chr5	67118861	67118902	-114419357	+	(ATAAGA)n	Simple_repeat	Simple_repeat	1	43	0	3
chr5	67216743	67216744	chunk0153_40_1	6.03438	AR_DHT_Control	chr5	67216715	67216778	-114321481	-	MIR	SINE	MIR	-11	251	189	3
chr5	67235835	67235836	chunk0153_41_1	10.6722	AR_DHT_Control	chr5	67235791	67235870	-114302389	-	Tigger19b	DNA	TcMar-Tigger	-351	199	127	3
chr5	67413080	67413081	chunk0153_49_1	6.44773	AR_DHT_Control	chr5	67413077	67413360	-114124899	-	AluJb	SINE	Alu	-13	299	2	3
chr5	67698857	67698858	chunk0153_60_1	201.0612	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	67698420	67699120	-113839139	-	Charlie25	DNA	hAT-Charlie	-704	1820	1079	3
chr5	67875805	67875806	chunk0153_66_1	21.3747	AR_DHT_Control	chr5	67875701	67875938	-113662321	-	MER121	DNA	hAT?	-168	233	2	3
chr5	67921278	67921279	chunk0153_68_1	5.28628	AR_DHT_Control	chr5	67921221	67921330	-113616929	-	L2c	LINE	L2	-227	3160	3058	3
chr5	67926556	67926557	chunk0153_69_1	6.04605	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	67925965	67926916	-113611343	-	L1M5	LINE	L1	-1318	4828	3776	3
chr5	67928468	67928469	chunk0153_70_1	6.83133	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	67927416	67928566	-113609693	-	L1ME1	LINE	L1	-242	6202	5051	3
chr5	68074401	68074402	chunk0153_77_1	7.42871	AR_DHT_Control	chr5	68074277	68074487	-113463772	-	MER58A	DNA	hAT-Charlie	-1	223	1	3
chr5	68088007	68088008	chunk0153_79_1	37.12918	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	68087872	68088116	-113450143	+	MamTip3	DNA	hAT-Tip100	237	493	-7	3
chr5	68134643	68134644	chunk0153_83_1	27.7557	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	68134446	68134690	-113403569	+	L4_B_Mam	LINE	RTE-X	1802	2051	-2890	3
chr5	68406830	68406831	chunk0153_99_1	12.2363	AR_DHT_Control	chr5	68406591	68407854	-113130405	+	MER45R	DNA	hAT-Tip100	1	1261	-320	3
chr5	68565387	68565388	chunk0153_115_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	68565198	68565395	-112972864	+	L1PB1	LINE	L1	3	200	-6663	3
chr5	68565387	68565388	chunk0153_115_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	68565373	68570851	-112967408	+	L1PB1	LINE	L1	810	6332	-535	3
chr5	68573947	68573948	chunk0153_117_1	29.8549	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	68573841	68573960	-112964299	-	L1M7	LINE	L1	-1997	4217	4088	3
chr5	68713674	68713675	chunk0153_121_1	8.27376	AR_DHT_Control	chr5	68713602	68713854	-112824405	-	MIRb	SINE	MIR	-8	260	1	3
chr5	68759593	68759594	chunk0153_122_1	6.18774	AR_DHT_Control	chr5	68759582	68759724	-112778535	+	L2c	LINE	L2	3099	3242	-133	3
chr5	68783305	68783306	chunk0153_124_1	112.01012	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	68782993	68783640	-112754619	-	L2	LINE	L2	-969	2450	1689	3
chr5	68985011	68985012	chunk0153_133_1	28.69884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	68984875	68985138	-112553121	+	L1MEi	LINE	L1	1181	1436	-776	3
chr5	69019490	69019491	chunk0153_138_1	24.73805	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	69019354	69019804	-112518455	-	MLT1C	LTR	ERVL-MaLR	0	467	1	3
chr5	69035241	69035242	chunk0153_144_1	20.37362	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	69035219	69035654	-112502605	+	L1ME4b	LINE	L1	404	862	-30	3
chr5	69165056	69165057	chunk0153_147_1	20.0996	AR_DHT_Control	chr5	69164946	69165172	-112373087	+	L1MC1	LINE	L1	5677	5894	-439	3
chr5	69343184	69343185	chunk0153_153_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	69343046	69343465	-112194794	-	L1MB7	LINE	L1	-1258	4888	4512	3
chr5	69521386	69521387	chunk0153_159_1	4.57322	AR_DHT_Control	chr5	69521161	69521486	-112016773	-	L1ME3G	LINE	L1	-246	678	333	3
chr5	70401562	70401563	chunk0153_161_1	7.36432	AR_DHT_Control	chr5	70400852	70402000	-111136259	+	LTR12E	LTR	ERV1	1	1167	-155	3
chr5	71089843	71089844	chunk0153_165_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	71089759	71090089	-110448170	+	Tigger3b	DNA	TcMar-Tigger	196	544	-687	3
chr5	71481598	71481599	chunk0153_169_1	7.46309	AR_DHT_Control	chr5	71481577	71481690	-110056569	-	L1MEf	LINE	L1	-5644	756	645	3
chr5	71482305	71482306	chunk0153_171_1	39.19069	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	71482269	71482446	-110055813	-	L1MEf	LINE	L1	-6119	281	102	3
chr5	71556159	71556160	chunk0153_176_1	24.63994	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	71555740	71556662	-109981597	-	L1ME4b	LINE	L1	-1390	4756	3718	3
chr5	71561652	71561653	chunk0153_177_1	11.5514	AR_DHT_Control	chr5	71561474	71561693	-109976566	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr5	71565654	71565655	chunk0153_178_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	71565344	71565726	-109972533	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	3
chr5	71713351	71713352	chunk0153_195_1	38.9651	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	71713321	71713590	-109824669	+	MLT1I	LTR	ERVL-MaLR	5	287	-124	3
chr5	71925104	71925105	chunk0153_208_1	12.1372	AR_DHT_Control	chr5	71924957	71925448	-109612811	+	L3	LINE	CR1	2184	2698	-1401	3
chr5	71925816	71925817	chunk0153_210_1	16.49521	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	71925768	71925825	-109612434	+	GA-rich	Low_complexity	Low_complexity	1	57	0	3
chr5	72016372	72016373	chunk0153_217_1	6.73207	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	72016214	72016401	-109521858	+	L2a	LINE	L2	3176	3426	0	3
chr5	72022092	72022093	chunk0153_218_1	6.9447	AR_DHT_Control	chr5	72021947	72022290	-109515969	-	L1PA15	LINE	L1	-3	6162	5820	3
chr5	72027015	72027016	chunk0153_220_1	23.82852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	72025182	72027785	-109510474	+	L1ME3	LINE	L1	3361	6120	-42	3
chr5	72107024	72107025	chunk0153_224_1	4.15002	AR_DHT_Control	chr5	72106991	72107048	-109431211	+	G-rich	Low_complexity	Low_complexity	1	57	0	3
chr5	72139312	72139313	chunk0153_229_1	60.9413	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	72139305	72139426	-109398833	+	MIR3	SINE	MIR	6	133	-135	3
chr5	72247074	72247075	chunk0153_234_1	8.46929	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	72246993	72247085	-109291174	+	MIR3	SINE	MIR	58	150	-58	3
chr5	72273695	72273696	chunk0153_238_1	33.8861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	72273386	72274071	-109264188	-	Tigger3b	DNA	TcMar-Tigger	0	1231	536	3
chr5	72274802	72274803	chunk0153_240_1	17.29827	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	72274378	72274910	-109263349	-	Tigger3b	DNA	TcMar-Tigger	-696	535	2	3
chr5	72587114	72587115	chunk0153_248_1	11.74384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	72587099	72587131	-108951128	+	L2b	LINE	L2	3344	3375	0	3
chr5	72613687	72613688	chunk0153_252_1	10.5201	AR_DHT_Control	chr5	72613230	72614358	-108923901	-	L1MA8	LINE	L1	-4	6287	5149	3
chr5	72679087	72679088	chunk0153_254_1	14.51076	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	72677415	72679544	-108858715	-	L1MA4A	LINE	L1	-880	6125	3924	3
chr5	72680998	72680999	chunk0153_256_1	6.49378	AR_DHT_Control	chr5	72680894	72681421	-108856838	-	L1MA4A	LINE	L1	-5572	1277	759	3
chr5	72767681	72767682	chunk0153_259_1	4.06817	AR_DHT_Control	chr5	72767676	72768194	-108770065	+	MER45R	DNA	hAT-Tip100	318	780	-801	3
chr5	72790289	72790290	chunk0153_261_1	60.5837	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	72790031	72790630	-108747629	-	LTR104_Mam	LTR	Gypsy	-838	671	62	3
chr5	72884128	72884129	chunk0153_272_1	22.3697	AR_DHT_Control	chr5	72884049	72884306	-108653953	-	L1MB8	LINE	L1	-508	5670	5409	3
chr5	72940119	72940120	chunk0153_276_1	24.92772	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	72939954	72940703	-108597556	+	L1M7	LINE	L1	66	913	-5305	3
chr5	73030697	73030698	chunk0153_279_1	12.789	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	73030619	73030799	-108507460	+	MER5A	DNA	hAT-Charlie	3	189	0	3
chr5	73262293	73262294	chunk0153_285_1	6.94497	AR_DHT_Control	chr5	73261912	73262374	-108275885	-	LTR40b	LTR	ERVL	0	462	1	3
chr5	73307589	73307590	chunk0153_288_1	28.27172	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	73307473	73307640	-108230619	+	L1ME3A	LINE	L1	5968	6164	-9	3
chr5	73344817	73344818	chunk0153_292_1	17.88981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	73344246	73344895	-108193364	-	L1ME1	LINE	L1	-19	6160	5482	3
chr5	73431425	73431426	chunk0153_298_1	11.28265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	73431400	73431651	-108106608	+	MARNA	DNA	TcMar-Mariner	80	360	-226	3
chr5	73606551	73606552	chunk0153_311_1	123.953	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	73605614	73606707	-107931552	-	L1MC4a	LINE	L1	-2	7880	6695	3
chr5	74068222	74068223	chunk0153_327_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	74067401	74068279	-107469980	-	HAL1	LINE	L1	-549	1958	992	3
chr5	74103722	74103723	chunk0153_330_1	43.36336	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	74103603	74103816	-107434443	-	LTR83	LTR	ERVL	-438	342	67	3
chr5	74104797	74104798	chunk0153_334_1	76.6406	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	74104705	74104848	-107433411	+	MamRep434	DNA	TcMar-Tigger	103	233	-193	3
chr5	74111802	74111803	chunk0153_335_1	39.6626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	74111338	74112105	-107426154	+	L1ME3	LINE	L1	5360	6162	0	3
chr5	74380181	74380182	chunk0153_349_1	6.54035	AR_DHT_Control	chr5	74380160	74380748	-107157511	+	MamRTE1	LINE	RTE-BovB	3067	3713	-99	3
chr5	74393025	74393026	chunk0153_350_1	21.44124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	74392982	74393513	-107144746	-	MLT1E1A	LTR	ERVL-MaLR	-2	678	47	3
chr5	74416862	74416863	chunk0153_357_1	7.06101	AR_DHT_Control	chr5	74416709	74416897	-107121362	+	MIR	SINE	MIR	31	221	-41	3
chr5	74489493	74489494	chunk0153_358_1	32.8556	AR_DHT_Control	chr5	74489380	74489720	-107048539	+	Tigger3a	DNA	TcMar-Tigger	1	346	-2	3
chr5	74828173	74828174	chunk0153_370_1	23.0946	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	74827965	74828304	-106709955	-	Charlie2b	DNA	hAT-Charlie	-636	2146	1781	3
chr5	74868934	74868935	chunk0153_376_1	14.7725	AR_DHT_Control	chr5	74868780	74869018	-106669241	-	MIR	SINE	MIR	0	262	2	3
chr5	74917102	74917103	chunk0153_378_1	7.97539	AR_DHT_Control	chr5	74916966	74917366	-106620893	+	MSTD	LTR	ERVL-MaLR	1	396	0	3
chr5	74964148	74964149	chunk0153_380_1	5.16131	AR_DHT_Control	chr5	74964059	74964219	-106574040	-	L2b	LINE	L2	-9	3366	3207	3
chr5	75011081	75011082	chunk0153_383_1	15.4506	AR_DHT_Control	chr5	75011057	75011354	-106526905	-	L2b	LINE	L2	-1	3425	3099	3
chr5	75050014	75050015	chunk0153_386_1	28.52844	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	75049938	75050173	-106488086	-	MIR	SINE	MIR	-48	220	1	3
chr5	75133991	75133992	chunk0153_388_1	10.1791	AR_DHT_Control	chr5	75131334	75137172	-106401087	+	L1PA5	LINE	L1	295	6151	-3	3
chr5	75342008	75342009	chunk0153_399_1	8.61228	AR_DHT_Control	chr5	75341996	75342084	-106196175	-	L2c	LINE	L2	-5	3382	3289	3
chr5	75357063	75357064	chunk0153_401_1	37.02881	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75357058	75357568	-106180691	+	L1MB2	LINE	L1	5573	6061	-110	3
chr5	75364019	75364020	chunk0153_405_1	5.48005	AR_DHT_Control	chr5	75363978	75364022	-106174237	+	(GT)n	Simple_repeat	Simple_repeat	1	44	0	3
chr5	75496162	75496163	chunk0153_411_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	75496048	75496957	-106041302	+	L1ME1	LINE	L1	5210	6173	-6	3
chr5	75505937	75505938	chunk0153_413_1	21.55995	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	75505848	75505964	-106032295	+	L2a	LINE	L2	3302	3421	-5	3
chr5	75620830	75620831	chunk0153_416_1	15.1839	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	75620792	75621463	-105916796	-	L1MD2	LINE	L1	-5765	782	102	3
chr5	75624031	75624032	chunk0153_417_1	38.6359	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	75623950	75624132	-105914127	+	Tigger15a	DNA	TcMar-Tigger	95	298	-417	3
chr5	75668896	75668897	chunk0153_419_1	6.98722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75668796	75668951	-105869308	+	MER5A1	DNA	hAT-Charlie	2	166	0	3
chr5	75694354	75694355	chunk0153_420_1	9.21264	AR_DHT_Control	chr5	75694353	75694428	-105843831	-	L1MA7	LINE	L1	-1	6290	6218	3
chr5	75827396	75827397	chunk0153_423_1	193.6793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75827239	75827646	-105710613	-	L1ME3C	LINE	L1	-267	5856	5407	3
chr5	75850929	75850930	chunk0153_425_1	9.57048	AR_DHT_Control	chr5	75850647	75851058	-105687201	-	MER83	LTR	ERV1	-42	406	1	3
chr5	75856228	75856229	chunk0153_426_1	10.1791	AR_DHT_Control	chr5	75855658	75856955	-105681304	-	L1MA2	LINE	L1	-1	6303	5008	3
chr5	75864918	75864919	chunk0153_427_1	6.05516	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	75864695	75865984	-105672275	+	ERV3-16A3_I-int	LTR	ERVL	2695	4002	-1224	3
chr5	76181199	76181200	chunk0153_431_1	7.2534	AR_DHT_Control	chr5	76181154	76181373	-105356886	+	MER58A	DNA	hAT-Charlie	1	221	-3	3
chr5	76231231	76231232	chunk0153_433_1	18.7845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76231176	76231246	-105307013	-	L1MA7	LINE	L1	-202	6089	6020	3
chr5	76348468	76348469	chunk0153_442_1	58.5948	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76347757	76348596	-105189663	-	L1MC1	LINE	L1	-6	6327	5491	3
chr5	76369075	76369076	chunk0153_444_1	49.8713	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76368962	76369267	-105168992	+	L2b	LINE	L2	3082	3373	-2	3
chr5	76379937	76379938	chunk0153_446_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76379818	76380027	-105158232	+	MIRc	SINE	MIR	11	246	-22	3
chr5	76496464	76496465	chunk0154_3_1	172.6523	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76496174	76496630	-105041629	-	MLT1F2	LTR	ERVL-MaLR	-30	530	1	3
chr5	76637778	76637779	chunk0154_14_1	33.7225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	76637624	76637797	-104900462	+	Tigger19b	DNA	TcMar-Tigger	264	451	-99	3
chr5	76663534	76663535	chunk0154_16_1	10.6691	AR_DHT_Control	chr5	76663459	76663591	-104874668	+	Charlie9	DNA	hAT-Charlie	1	138	-123	3
chr5	76727342	76727343	chunk0154_18_1	7.03714	AR_DHT_Control	chr5	76727279	76727361	-104810898	-	MIRc	SINE	MIR	-96	172	90	3
chr5	76919215	76919216	chunk0154_24_1	8.24382	AR_DHT_Control	chr5	76918534	76919519	-104618740	-	L1MC1	LINE	L1	-5	6328	5328	3
chr5	76990793	76990794	chunk0154_29_1	87.64593	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	76990787	76991311	-104546948	+	MLT2F	LTR	ERVL	1	649	-14	3
chr5	77057753	77057754	chunk0154_35_1	11.4219	AR_DHT_Control	chr5	77057512	77057945	-104480314	-	MER70A	LTR	ERVL	0	472	36	3
chr5	77187227	77187228	chunk0154_51_1	23.49705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	77186995	77187628	-104350631	+	Kanga1c	DNA	TcMar-Tc2	76	729	0	3
chr5	77194036	77194037	chunk0154_52_1	21.7828	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	77192198	77194422	-104343837	-	L1ME2	LINE	L1	-41	6123	3839	3
chr5	77369610	77369611	chunk0154_66_1	20.65289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	77369541	77369716	-104168543	-	MIRb	SINE	MIR	-2	260	60	3
chr5	77389996	77389997	chunk0154_67_1	5.6425	AR_DHT_Control	chr5	77389542	77390129	-104148130	-	L1ME2z	LINE	L1	-337	6107	5448	3
chr5	77460076	77460077	chunk0154_73_1	8.15319	AR_DHT_Control	chr5	77459849	77460273	-104077986	-	MER47B	DNA	TcMar-Tigger	0	418	2	3
chr5	77729729	77729730	chunk0154_81_1	23.01276	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	77729699	77729932	-103808327	-	MamRep605	LTR?	LTR?	-525	324	88	3
chr5	77803542	77803543	chunk0154_84_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	77803418	77803566	-103734693	+	L1MEd	LINE	L1	1316	1461	-5625	3
chr5	77907179	77907180	chunk0154_85_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	77906940	77907227	-103631032	-	LTR33	LTR	ERVL	-236	279	3	3
chr5	78174579	78174580	chunk0154_99_1	6.48643	AR_DHT_Control	chr5	78173653	78175357	-103362902	-	L1PA6	LINE	L1	-4489	1695	1	3
chr5	78208180	78208181	chunk0154_101_1	35.2277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	78207934	78208288	-103329971	+	HAL1b	LINE	L1	1594	1947	-560	3
chr5	78294148	78294149	chunk0154_102_1	7.14391	AR_DHT_Control	chr5	78294133	78294241	-103244018	+	MER5B	DNA	hAT-Charlie	51	177	-1	3
chr5	78399330	78399331	chunk0154_104_1	15.2076	AR_DHT_Control	chr5	78398846	78399956	-103138303	-	L1MC1	LINE	L1	-205	6303	5145	3
chr5	78697044	78697045	chunk0154_112_1	16.206	AR_DHT_Control	chr5	78696839	78697170	-102841089	-	L1MD2	LINE	L1	-408	5951	5579	3
chr5	78740580	78740581	chunk0154_119_1	32.54235	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	78740372	78740773	-102797486	+	L2a	LINE	L2	2911	3375	-51	3
chr5	78855590	78855591	chunk0154_123_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	78854945	78856065	-102682194	-	L1MA5	LINE	L1	-6023	1145	6	3
chr5	78901794	78901795	chunk0154_124_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	78901663	78901962	-102636297	+	L1MB7	LINE	L1	5281	5578	-606	3
chr5	79035606	79035607	chunk0154_129_1	66.5056	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	79035538	79035799	-102502460	-	Chap1_Mam	DNA	hAT-Charlie	0	342	102	3
chr5	79145525	79145526	chunk0154_131_1	12.73	AR_DHT_Control	chr5	79145508	79145564	-102392695	+	(AC)n	Simple_repeat	Simple_repeat	1	57	0	3
chr5	79152150	79152151	chunk0154_132_1	14.2738	AR_DHT_Control	chr5	79152047	79152272	-102385987	-	L2a	LINE	L2	0	3426	3184	3
chr5	79176560	79176561	chunk0154_136_1	19.55923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	79176510	79176753	-102361506	+	MIR	SINE	MIR	12	253	-9	3
chr5	79345336	79345337	chunk0154_142_1	168.0745	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	79345091	79345621	-102192638	-	L1ME1	LINE	L1	-12	6167	5599	3
chr5	79357619	79357620	chunk0154_144_1	43.4936	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	79357350	79358068	-102180191	-	MER65-int	LTR	ERV1	-3847	1024	232	3
chr5	79420625	79420626	chunk0154_148_1	64.85683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	79420342	79420642	-102117617	+	L2b	LINE	L2	3026	3320	-55	3
chr5	79457518	79457519	chunk0154_151_1	5.69226	AR_DHT_Control	chr5	79457201	79457848	-102080411	+	Tigger17a	DNA	TcMar-Tigger	2	653	-1	3
chr5	79485922	79485923	chunk0154_154_1	72.4627	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	79485799	79486333	-102051926	+	MLT1G1	LTR	ERVL-MaLR	1	568	-11	3
chr5	79495472	79495473	chunk0154_155_1	123.4605	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	79495223	79495537	-102042722	+	L2c	LINE	L2	2964	3277	-110	3
chr5	79508323	79508324	chunk0154_160_1	21.49711	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	79508200	79508427	-102029832	+	MER112	DNA	hAT-Charlie	2	246	-15	3
chr5	79527546	79527547	chunk0154_162_1	6.48643	AR_DHT_Control	chr5	79527503	79527677	-102010582	+	MIR	SINE	MIR	87	262	0	3
chr5	79549028	79549029	chunk0154_164_1	7.24914	AR_DHT_Control	chr5	79548918	79549155	-101989104	+	L2a	LINE	L2	3157	3425	-1	3
chr5	79612367	79612368	chunk0154_167_1	5.20246	AR_DHT_Control	chr5	79612335	79612399	-101925860	+	G-rich	Low_complexity	Low_complexity	1	64	0	3
chr5	79673559	79673560	chunk0154_169_1	32.1635	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	79672171	79673689	-101864570	-	L1MA3	LINE	L1	0	6305	4756	3
chr5	79709338	79709339	chunk0154_170_1	6.18774	AR_DHT_Control	chr5	79709117	79709431	-101828828	+	L1M5	LINE	L1	5490	5820	-304	3
chr5	80015943	80015944	chunk0154_173_1	27.8478	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	80015685	80016343	-101521916	-	MamRep605	LTR?	LTR?	-50	799	15	3
chr5	80017135	80017136	chunk0154_175_1	35.9155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80016976	80017315	-101520944	-	L4_B_Mam	LINE	RTE-X	-8	4982	4550	3
chr5	80031771	80031772	chunk0154_178_1	4.92181	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	80031525	80031792	-101506467	-	MLT1H	LTR	ERVL-MaLR	-146	403	125	3
chr5	80038960	80038961	chunk0154_179_1	65.5954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	80038706	80039144	-101499115	-	L1ME4a	LINE	L1	-422	5702	5255	3
chr5	80060730	80060731	chunk0154_181_1	5.32898	AR_DHT_Control	chr5	80060488	80060771	-101477488	+	AluJb	SINE	Alu	12	303	-9	3
chr5	80151737	80151738	chunk0154_185_1	45.30867	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	80151717	80151819	-101386440	-	L2a	LINE	L2	-4	3422	3312	3
chr5	80181860	80181861	chunk0154_187_1	75.1817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	80181680	80182262	-101355997	+	LTR62	LTR	ERVL	76	704	-5	3
chr5	80230637	80230638	chunk0154_195_1	6.93299	AR_DHT_Control	chr5	80230561	80230769	-101307490	-	MIRb	SINE	MIR	0	268	50	3
chr5	80250971	80250972	chunk0154_200_1	31.0533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80250780	80251010	-101287249	+	MER67B	LTR	ERV1	428	659	-2	3
chr5	80252855	80252856	chunk0154_201_1	15.52659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80252672	80252864	-101285395	-	MIRb	SINE	MIR	-36	232	25	3
chr5	80375574	80375575	chunk0154_204_1	15.6143	AR_DHT_Control	chr5	80375554	80375862	-101162397	-	L4_B_Mam	LINE	RTE-X	-166	4972	4441	3
chr5	80425391	80425392	chunk0154_211_1	82.5586	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	80425363	80425548	-101112711	-	L1ME5	LINE	L1	-50	6144	5930	3
chr5	80475085	80475086	chunk0154_213_1	36.4074	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80474989	80475206	-101063053	-	MER58A	DNA	hAT-Charlie	0	224	2	3
chr5	80486718	80486719	chunk0154_214_1	51.7022	AR_DHT_Control	chr5	80486257	80487075	-101051184	+	L1MB8	LINE	L1	5565	6415	-161	3
chr5	80622948	80622949	chunk0154_216_1	21.78648	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	80622608	80623013	-100915246	+	MER57F	LTR	ERV1	2	435	0	3
chr5	80820497	80820498	chunk0154_229_1	31.313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	80820461	80820558	-100717701	+	L2c	LINE	L2	3292	3385	-2	3
chr5	80825919	80825920	chunk0154_230_1	39.967	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	80825722	80826045	-100712214	+	L4_C_Mam	LINE	RTE-X	4687	4965	-173	3
chr5	80912565	80912566	chunk0154_234_1	9.17597	AR_DHT_Control	chr5	80911863	80912788	-100625471	+	L1ME1	LINE	L1	5243	6225	-352	3
chr5	81060657	81060658	chunk0154_240_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	81060248	81060673	-100477586	+	L2a	LINE	L2	2959	3425	-1	3
chr5	81245410	81245411	chunk0154_241_1	6.17841	AR_DHT_Control	chr5	81245272	81245428	-100292831	+	MIRb	SINE	MIR	4	158	-110	3
chr5	81272583	81272584	chunk0154_243_1	41.6494	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	81269745	81273081	-100265178	+	L1PB1	LINE	L1	407	3847	-3015	3
chr5	81355397	81355398	chunk0154_246_1	12.77927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	81355366	81355551	-100182708	+	L1MA2	LINE	L1	5798	5984	-320	3
chr5	81376428	81376429	chunk0154_252_1	18.79773	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	81373066	81379495	-100158764	+	L1PA7	LINE	L1	5	6469	0	3
chr5	81589211	81589212	chunk0154_257_1	4.05799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	81589097	81589414	-99948845	+	CR1_Mam	LINE	CR1	331	658	-1546	3
chr5	81641702	81641703	chunk0154_258_1	24.8125	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	81641694	81641824	-99896435	+	L1ME4b	LINE	L1	444	572	-320	3
chr5	81794194	81794195	chunk0154_261_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	81793682	81794270	-99743989	+	L2b	LINE	L2	2787	3375	0	3
chr5	81997084	81997085	chunk0154_265_1	7.36432	AR_DHT_Control	chr5	81996962	82000000	-99538259	+	L1PA14	LINE	L1	1042	4234	-2532	3
chr5	82135529	82135530	chunk0154_273_1	11.1716	AR_DHT_Control	chr5	82132250	82138678	-99399581	-	L1PA7	LINE	L1	-1	6468	8	3
chr5	82262515	82262516	chunk0154_277_1	4.59852	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	82262409	82262574	-99275685	-	L1MC5a	LINE	L1	-16	2761	2584	3
chr5	82366096	82366097	chunk0154_278_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	82366012	82366206	-99172053	+	MER63A	DNA	hAT-Blackjack	4	202	-8	3
chr5	82605521	82605522	chunk0154_284_1	7.69414	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	82604957	82610207	-98928052	+	L1MA4A	LINE	L1	718	5992	-1570	3
chr5	82721002	82721003	chunk0154_287_1	10.5201	AR_DHT_Control	chr5	82720992	82721115	-98817144	+	MLT1J	LTR	ERVL-MaLR	290	414	-98	3
chr5	83115681	83115682	chunk0154_295_1	10.1791	AR_DHT_Control	chr5	83115497	83116387	-98421872	+	Charlie24	DNA	hAT-Charlie	1075	2024	-426	3
chr5	83123599	83123600	chunk0154_296_1	47.4264	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	83122612	83123924	-98414335	-	L1ME1	LINE	L1	-3072	3247	1914	3
chr5	83124857	83124858	chunk0154_298_1	9.45481	AR_DHT_Control	chr5	83124852	83125708	-98412551	-	L1ME2	LINE	L1	-531	5821	4898	3
chr5	83183591	83183592	chunk0154_300_1	16.0943	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	83183459	83183728	-98354531	-	L1MEb	LINE	L1	-5787	283	6	3
chr5	83590014	83590015	chunk0154_307_1	12.10234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	83589915	83590056	-97948203	+	L2a	LINE	L2	3282	3424	-2	3
chr5	83683969	83683970	chunk0154_312_1	90.56305	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr5	83683969	83684021	-97854238	+	(GGA)n	Simple_repeat	Simple_repeat	1	50	0	3
chr5	84006513	84006514	chunk0154_318_1	57.35866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	84006394	84006742	-97531517	+	L1PA15	LINE	L1	5814	6161	-4	3
chr5	84131590	84131591	chunk0154_323_1	37.0408	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	84131483	84131719	-97406540	+	MIR	SINE	MIR	1	244	-18	3
chr5	84443514	84443515	chunk0154_324_1	33.3158	AR_DHT_Control	chr5	84440887	84444205	-97094054	+	L1MC2	LINE	L1	3310	6738	-24	3
chr5	84519108	84519109	chunk0154_325_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	84517312	84519415	-97018844	-	L1PA13	LINE	L1	-4326	2459	290	3
chr5	84877615	84877616	chunk0154_326_1	10.1791	AR_DHT_Control	chr5	84877521	84877871	-96660388	+	L1PA13	LINE	L1	5814	6160	-3	3
chr5	84906133	84906134	chunk0154_327_1	11.7947	AR_DHT_Control	chr5	84905724	84907974	-96630285	+	L1MC3	LINE	L1	1	2535	-4125	3
chr5	85527698	85527699	chunk0154_333_1	22.2102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	85527365	85527731	-96010528	-	MLT2B4	LTR	ERVL	-64	350	1	3
chr5	85633465	85633466	chunk0154_337_1	15.55625	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	85633373	85633652	-95904607	-	LTR50	LTR	ERVL	-510	285	5	3
chr5	86902685	86902686	chunk0154_347_1	17.42986	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	86901832	86903125	-94635134	+	L2	LINE	L2	1268	2800	-619	3
chr5	87020436	87020437	chunk0154_348_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	87020058	87020937	-94517322	-	L1PA15-16	LINE	L1	-5950	903	3	3
chr5	87035497	87035498	chunk0154_349_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	87033673	87036244	-94502015	-	L1PBa	LINE	L1	-4215	2648	7	3
chr5	87099757	87099758	chunk0154_351_1	79.106	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	87099645	87099758	-94438501	-	L2c	LINE	L2	0	3387	3279	3
chr5	87256239	87256240	chunk0154_355_1	4.83532	AR_DHT_Control	chr5	87256222	87256244	-94282015	+	(T)n	Simple_repeat	Simple_repeat	1	22	0	3
chr5	87552119	87552120	chunk0154_361_1	16.52803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	87552043	87552274	-93985985	-	LTR16A1	LTR	ERVL	0	456	192	3
chr5	87565909	87565910	chunk0154_364_1	46.278	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	87564783	87566289	-93971970	-	L1P3	LINE	L1	-2146	4315	2804	3
chr5	87580523	87580524	chunk0154_365_1	5.58563	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	87580522	87580578	-93957681	+	L2c	LINE	L2	3326	3383	-4	3
chr5	87640088	87640089	chunk0154_368_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	87639971	87641828	-93896431	-	L1MEf	LINE	L1	-4630	2010	24	3
chr5	87686411	87686412	chunk0154_372_1	186.25747	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	87686396	87686431	-93851828	+	(TTACA)n	Simple_repeat	Simple_repeat	1	37	0	3
chr5	87757116	87757117	chunk0154_378_1	12.4335	AR_DHT_Control	chr5	87756863	87757892	-93780367	-	L1MA7	LINE	L1	-131	6160	5108	3
chr5	87865404	87865405	chunk0154_383_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	87865253	87865727	-93672532	+	MamRTE1	LINE	RTE-BovB	3146	3687	-125	3
chr5	88025636	88025637	chunk0154_385_1	14.7397	AR_DHT_Control	chr5	88025572	88025779	-93512480	-	MER58A	DNA	hAT-Charlie	0	224	2	3
chr5	88078116	88078117	chunk0154_389_1	7.14391	AR_DHT_Control	chr5	88075511	88079034	-93459225	+	L1PA14	LINE	L1	4617	8153	-3	3
chr5	88175392	88175393	chunk0154_392_1	12.1886	AR_DHT_Control	chr5	88175326	88175464	-93362795	-	L1MC3	LINE	L1	-916	6869	6731	3
chr5	88306556	88306557	chunk0154_397_1	94.203	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	88305753	88310434	-93227825	+	L1P2	LINE	L1	3	4698	-1448	3
chr5	88496870	88496871	chunk0154_399_1	9.93187	AR_DHT_Control	chr5	88496824	88497067	-93041192	-	MIRb	SINE	MIR	-15	253	17	3
chr5	88652221	88652222	chunk0154_403_1	7.09019	AR_DHT_Control	chr5	88651708	88652322	-92885937	+	L2b	LINE	L2	2772	3374	-1	3
chr5	88925908	88925909	chunk0154_410_1	56.3142	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	88925795	88926088	-92612171	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	938	3
chr5	88926828	88926829	chunk0154_413_1	18.37647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	88926230	88927101	-92611158	-	Tigger3b	DNA	TcMar-Tigger	-297	934	36	3
chr5	88964963	88964964	chunk0154_414_1	85.379	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	88964452	88965048	-92573211	+	L2c	LINE	L2	2706	3387	0	3
chr5	89231307	89231308	chunk0154_425_1	68.3356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	89230849	89231459	-92306800	-	L1MCb	LINE	L1	-4851	1194	572	3
chr5	90172899	90172900	chunk0154_436_1	23.3622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	90172664	90172964	-91365295	-	LTR101_Mam	LTR	ERVL	-18	811	506	3
chr5	90289576	90289577	chunk0154_437_1	9.19742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	90289035	90289691	-91248568	-	L1MB8	LINE	L1	0	6178	5512	3
chr5	90381762	90381763	chunk0154_445_1	4.83532	AR_DHT_Control	chr5	90381495	90381810	-91156449	+	MLT1L	LTR	ERVL-MaLR	279	604	-6	3
chr5	90462997	90462998	chunk0154_447_1	28.9324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	90462447	90463083	-91075176	+	L1M4	LINE	L1	2173	2819	-3327	3
chr5	90697959	90697960	chunk0155_2_1	18.03462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	90697890	90698011	-90840248	-	MIR1_Amn	SINE	MIR	-28	180	54	3
chr5	90767073	90767074	chunk0155_3_1	8.46955	AR_DHT_Control	chr5	90767056	90767252	-90771007	+	L1M5	LINE	L1	4621	4826	-1320	3
chr5	90867154	90867155	chunk0155_10_1	36.34986	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	90867114	90867159	-90671100	+	(GCAGGTTCT)n	Simple_repeat	Simple_repeat	1	51	0	3
chr5	90895208	90895209	chunk0155_17_1	69.7626	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	90895180	90895564	-90642695	-	L2b	LINE	L2	-22	3353	2930	3
chr5	90981881	90981882	chunk0155_24_1	10.8679	AR_DHT_Control	chr5	90981451	90981971	-90556288	+	MER6	DNA	TcMar-Tigger	97	611	-254	3
chr5	91061258	91061259	chunk0155_33_1	58.97795	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	91061104	91061392	-90476867	-	Tigger10	DNA	TcMar-Tigger	-968	876	597	3
chr5	91321560	91321561	chunk0155_57_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	91321274	91321851	-90216408	-	L1PB2	LINE	L1	-773	5373	4774	3
chr5	91529001	91529002	chunk0155_61_1	87.22059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	91528912	91529096	-90009163	+	L2c	LINE	L2	2944	3133	-254	3
chr5	91618509	91618510	chunk0155_68_1	8.35541	AR_DHT_Control	chr5	91618346	91618753	-89919506	-	MLT1J-int	LTR	ERVL-MaLR	-498	889	454	3
chr5	91651780	91651781	chunk0155_71_1	6.5005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	91651195	91653182	-89885077	+	L1PB4	LINE	L1	3	2005	-4861	3
chr5	91689769	91689770	chunk0155_72_1	20.7159	AR_DHT_Control	chr5	91689680	91690014	-89848245	-	MLT1A1	LTR	ERVL-MaLR	-55	353	1	3
chr5	91754204	91754205	chunk0155_73_1	22.1219	AR_DHT_Control	chr5	91753478	91754519	-89783740	+	L1MD2	LINE	L1	5078	6132	-227	3
chr5	91775624	91775625	chunk0155_74_1	17.0938	AR_DHT_Control	chr5	91775550	91775780	-89762479	+	L2b	LINE	L2	3128	3346	-29	3
chr5	91803092	91803093	chunk0155_75_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	91802387	91803496	-89734763	+	LTR28C	LTR	ERV1	1	1129	0	3
chr5	91835345	91835346	chunk0155_79_1	13.8663	AR_DHT_Control	chr5	91834855	91835403	-89702856	-	L1MA8	LINE	L1	-6	6285	5721	3
chr5	91906539	91906540	chunk0155_81_1	6.45888	AR_DHT_Control	chr5	91906090	91907374	-89630885	-	L1MC4	LINE	L1	-4905	1310	9	3
chr5	92242444	92242445	chunk0155_87_1	9.06816	AR_DHT_Control	chr5	92242174	92242589	-89295670	+	MER47B	DNA	TcMar-Tigger	1	418	0	3
chr5	92289881	92289882	chunk0155_89_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	92289290	92291573	-89246686	-	L1MC2	LINE	L1	-1095	5226	2825	3
chr5	92383089	92383090	chunk0155_99_1	6.93299	AR_DHT_Control	chr5	92382938	92383114	-89155145	-	MER5A	DNA	hAT-Charlie	0	189	4	3
chr5	92514937	92514938	chunk0155_102_1	29.47874	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	92514740	92515174	-89023085	-	LTR23	LTR	ERV1	0	437	1	3
chr5	92896866	92896867	chunk0155_111_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	92896537	92898078	-88640181	-	BLACKJACK	DNA	hAT-Blackjack	-1343	1626	1	3
chr5	93058926	93058927	chunk0155_122_1	7.80475	AR_DHT_Control	chr5	93058907	93059030	-88479229	-	L2c	LINE	L2	-19	3368	3245	3
chr5	93071103	93071104	chunk0155_124_1	13.22408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	93070972	93071182	-88467077	-	CR1_Mam	LINE	CR1	-552	1652	1416	3
chr5	93112607	93112608	chunk0155_127_1	34.4302	AR_DHT_Control	chr5	93112599	93112720	-88425539	+	L2b	LINE	L2	3251	3369	-6	3
chr5	93556707	93556708	chunk0155_135_1	7.52656	AR_DHT_Control	chr5	93556465	93556903	-87981356	+	MLT1C	LTR	ERVL-MaLR	1	467	0	3
chr5	93557616	93557617	chunk0155_136_1	12.6608	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	93557377	93558315	-87979944	-	Tigger1	DNA	TcMar-Tigger	0	2418	1480	3
chr5	93716696	93716697	chunk0155_144_1	9.82619	AR_DHT_Control	chr5	93716693	93716718	-87821541	+	(A)n	Simple_repeat	Simple_repeat	1	25	0	3
chr5	93931710	93931711	chunk0155_152_1	23.54475	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	93931610	93932013	-87606246	-	L1ME3A	LINE	L1	0	6173	5773	3
chr5	94015274	94015275	chunk0155_154_1	4.75321	AR_DHT_Control	chr5	94013706	94016236	-87522023	+	L1M3f	LINE	L1	1244	3855	-3707	3
chr5	94101099	94101100	chunk0155_155_1	43.9446	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94099651	94101958	-87436301	+	L1PA14	LINE	L1	3963	6285	-1	3
chr5	94159905	94159906	chunk0155_159_1	46.8268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94159865	94159911	-87378348	-	MIRc	SINE	MIR	-17	251	201	3
chr5	94344663	94344664	chunk0155_165_1	37.04776	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	94344398	94345088	-87193171	+	L1MB3	LINE	L1	5479	6183	0	3
chr5	94367157	94367158	chunk0155_169_1	9.82619	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94366698	94367215	-87171044	-	LTR10C	LTR	ERV1	0	591	1	3
chr5	94368111	94368112	chunk0155_170_1	9.64794	AR_DHT_Control	chr5	94367856	94368212	-87170047	+	L1ME4c	LINE	L1	446	807	-23	3
chr5	94433541	94433542	chunk0155_181_1	38.06525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	94433539	94433794	-87104465	+	MIR	SINE	MIR	5	267	-1	3
chr5	94500692	94500693	chunk0155_185_1	17.62326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	94500075	94500703	-87037556	-	L2	LINE	L2	-424	2995	2322	3
chr5	94605075	94605076	chunk0155_188_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94604596	94606652	-86931607	+	L1PA10	LINE	L1	4276	6323	-1258	3
chr5	94801221	94801222	chunk0155_198_1	9.50609	AR_DHT_Control	chr5	94801118	94801282	-86736977	+	L2a	LINE	L2	3262	3426	0	3
chr5	94944923	94944924	chunk0155_205_1	20.10535	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94944911	94945075	-86593184	-	MIRb	SINE	MIR	-52	216	58	3
chr5	94998711	94998712	chunk0155_208_1	93.1098	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	94998598	94998885	-86539374	+	LTR51	LTR	ERV1	227	514	-157	3
chr5	95031850	95031851	chunk0155_209_1	7.67158	AR_DHT_Control	chr5	95029938	95035726	-86502533	+	L1PA17	LINE	L1	1152	6854	-15	3
chr5	95063959	95063960	chunk0155_210_1	13.2699	AR_DHT_Control	chr5	95063885	95064663	-86473596	-	Charlie20a	DNA	hAT-Charlie	-22	785	7	3
chr5	95123253	95123254	chunk0155_213_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	95121303	95123272	-86414987	+	L1MA3	LINE	L1	5721	7724	0	3
chr5	95304950	95304951	chunk0155_218_1	17.64544	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	95304845	95305062	-86233197	+	MIRc	SINE	MIR	5	236	-32	3
chr5	95323697	95323698	chunk0155_219_1	22.0806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	95323485	95324035	-86214224	+	HAL1	LINE	L1	1957	2497	-10	3
chr5	95336457	95336458	chunk0155_222_1	87.4743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	95336446	95336635	-86201624	+	MIRb	SINE	MIR	4	191	-77	3
chr5	95360964	95360965	chunk0155_223_1	10.1634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	95360031	95366493	-86171766	-	L1PB1	LINE	L1	-1	6866	251	3
chr5	95410341	95410342	chunk0155_225_1	6.09694	AR_DHT_Control	chr5	95409922	95410422	-86127837	+	MLT1J	LTR	ERVL-MaLR	1	511	-1	3
chr5	95473805	95473806	chunk0155_226_1	8.7059	AR_DHT_Control	chr5	95473575	95474291	-86063968	-	L1PA16	LINE	L1	-672	5494	4771	3
chr5	95508791	95508792	chunk0155_227_1	23.1333	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	95508388	95508842	-86029417	+	L2a	LINE	L2	2940	3426	0	3
chr5	95652998	95652999	chunk0155_238_1	123.1258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	95652248	95653198	-85885061	+	L2a	LINE	L2	2198	3148	-278	3
chr5	95677181	95677182	chunk0155_242_1	9.74833	AR_DHT_Control	chr5	95676974	95677341	-85860918	+	L2a	LINE	L2	3034	3424	-2	3
chr5	95727867	95727868	chunk0155_248_1	8.80746	AR_DHT_Control	chr5	95727809	95728034	-85810225	-	MLT1J2	LTR	ERVL-MaLR	-14	430	192	3
chr5	95756443	95756444	chunk0155_253_1	50.4718	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	95755983	95756779	-85781480	-	L1MB3	LINE	L1	-4	6179	5380	3
chr5	95811687	95811688	chunk0155_260_1	23.9152	AR_DHT_Control	chr5	95811014	95811999	-85726260	+	LTR5B	LTR	ERVK	1	1002	0	3
chr5	95975311	95975312	chunk0155_272_1	12.99964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	95975299	95975420	-85562839	-	MER5A	DNA	hAT-Charlie	-6	183	63	3
chr5	96027861	96027862	chunk0155_278_1	5.66005	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96027421	96030390	-85507869	+	Zaphod	DNA	hAT-Tip100	974	4030	-1	3
chr5	96212458	96212459	chunk0155_290_1	9.21264	AR_DHT_Control	chr5	96210227	96212831	-85325428	-	L1MD	LINE	L1	-1047	5099	2430	3
chr5	96222374	96222375	chunk0155_291_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96221206	96223428	-85314831	+	L1MA4A	LINE	L1	4077	6303	0	3
chr5	96245633	96245634	chunk0155_292_1	29.58113	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96245621	96245641	-85292618	+	(A)n	Simple_repeat	Simple_repeat	1	20	0	3
chr5	96267446	96267447	chunk0155_294_1	9.01771	AR_DHT_Control	chr5	96266588	96268298	-85269961	+	L1MA4	LINE	L1	1897	3607	-3958	3
chr5	96306757	96306758	chunk0155_296_1	113.78243	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	96303464	96309906	-85228353	-	L1PA7	LINE	L1	-3	6466	11	3
chr5	96314599	96314600	chunk0155_297_1	10.788	AR_DHT_Control	chr5	96314472	96314869	-85223390	+	L2c	LINE	L2	2951	3381	-6	3
chr5	96538948	96538949	chunk0155_309_1	11.14719	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96538773	96538959	-84999300	-	MamGypsy2-I	LTR	Gypsy	-50	4116	3882	3
chr5	96548835	96548836	chunk0155_310_1	30.8639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	96548750	96548852	-84989407	+	MER53	DNA	hAT	1	96	-97	3
chr5	96591544	96591545	chunk0155_311_1	14.84939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	96591194	96591742	-84946517	-	LTR24B	LTR	ERV1	-7	569	1	3
chr5	96647699	96647700	chunk0155_318_1	8.35541	AR_DHT_Control	chr5	96647497	96647892	-84890367	+	MLT1B	LTR	ERVL-MaLR	1	374	-16	3
chr5	96796787	96796788	chunk0155_327_1	14.4671	AR_DHT_Control	chr5	96796715	96796793	-84741466	-	MER81	DNA	hAT-Blackjack	-1	113	60	3
chr5	96924166	96924167	chunk0155_334_1	17.20788	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96924136	96924180	-84614079	+	(ATGTGTC)n	Simple_repeat	Simple_repeat	1	48	0	3
chr5	96958617	96958618	chunk0155_339_1	106.0907	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	96958521	96958817	-84579442	-	MLT1D	LTR	ERVL-MaLR	0	505	193	3
chr5	96981634	96981635	chunk0155_342_1	62.1125	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	96981584	96981655	-84556604	+	MamRep1879	DNA	hAT-Tip100?	38	108	-108	3
chr5	96985023	96985024	chunk0155_344_1	15.59362	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	96984730	96985064	-84553195	+	L2c	LINE	L2	3045	3379	-8	3
chr5	97013326	97013327	chunk0155_346_1	135.3966	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	97013035	97013482	-84524777	+	L2b	LINE	L2	2931	3372	-3	3
chr5	97097416	97097417	chunk0155_351_1	146.6118	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	97097189	97097649	-84440610	+	L1ME4b	LINE	L1	402	881	-11	3
chr5	97136572	97136573	chunk0155_353_1	18.143	AR_DHT_Control	chr5	97136454	97136580	-84401679	-	L2c	LINE	L2	-8	3367	3238	3
chr5	97193031	97193032	chunk0155_355_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	97192757	97193879	-84344380	-	L1PB1	LINE	L1	-5700	1163	3	3
chr5	97327067	97327068	chunk0155_362_1	46.1102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	97327018	97327077	-84211182	-	L2a	LINE	L2	0	3426	3368	3
chr5	97483037	97483038	chunk0155_369_1	13.4307	AR_DHT_Control	chr5	97482967	97483412	-84054847	+	LTR33	LTR	ERVL	35	513	-2	3
chr5	97644374	97644375	chunk0155_374_1	224.1034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	97643851	97644390	-83893869	+	L1PA16	LINE	L1	4748	5297	-849	3
chr5	97896817	97896818	chunk0155_377_1	12.1886	AR_DHT_Control	chr5	97896774	97897015	-83641244	-	L1MC3	LINE	L1	-1	6850	6610	3
chr5	98180871	98180872	chunk0155_381_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	98179920	98185997	-83352262	+	L1PB2	LINE	L1	254	6491	-376	3
chr5	98259603	98259604	chunk0155_382_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	98255821	98260396	-83277863	-	L1M1	LINE	L1	-2957	4608	15	3
chr5	98355938	98355939	chunk0155_384_1	9.22937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	98355593	98356009	-83182250	-	Charlie1b	DNA	hAT-Charlie	-57	466	32	3
chr5	99001768	99001769	chunk0155_403_1	6.43609	AR_DHT_Control	chr5	99001333	99002251	-82536008	+	L1ME1	LINE	L1	5151	6044	-135	3
chr5	99089975	99089976	chunk0155_404_1	10.7301	AR_DHT_Control	chr5	99089901	99090388	-82447871	-	MLT2B4	LTR	ERVL	-3	553	3	3
chr5	99145309	99145310	chunk0155_406_1	18.4988	AR_DHT_Control	chr5	99144896	99145984	-82392275	+	L1MC3	LINE	L1	5188	6332	-1	3
chr5	99275744	99275745	chunk0155_409_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	99275041	99276336	-82261923	+	MSTB-int	LTR	ERVL-MaLR	363	1645	-6	3
chr5	99471247	99471248	chunk0155_415_1	31.0478	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	99471247	99471303	-82066956	+	(TTTAATA)n	Simple_repeat	Simple_repeat	1	57	0	3
chr5	99587160	99587161	chunk0155_417_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	99586734	99587342	-81950917	+	MLT1C-int	LTR	ERVL-MaLR	423	1022	-349	3
chr5	99879199	99879200	chunk0155_419_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	99878578	99880511	-81657748	+	L1PREC2	LINE	L1	12	2326	-5829	3
chr5	100243086	100243087	chunk0155_422_1	6.48643	AR_DHT_Control	chr5	100242849	100243802	-81294457	+	MLT1F1-int	LTR	ERVL-MaLR	2	897	-512	3
chr5	100294728	100294729	chunk0155_425_1	10.3842	AR_DHT_Control	chr5	100294689	100294764	-81243495	-	L1M5	LINE	L1	-305	5819	5744	3
chr5	100495169	100495170	chunk0155_426_1	6.48643	AR_DHT_Control	chr5	100494894	100495268	-81042991	+	L4_A_Mam	LINE	RTE-X	4614	4990	0	3
chr5	100526505	100526506	chunk0155_427_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	100526221	100526565	-81011694	+	L1PB	LINE	L1	2375	2718	-3428	3
chr5	100551901	100551902	chunk0155_428_1	40.77769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	100551616	100552021	-80986238	-	MLT1C	LTR	ERVL-MaLR	0	467	1	3
chr5	100700300	100700301	chunk0155_435_1	11.1716	AR_DHT_Control	chr5	100699905	100705798	-80832461	+	L1PA6	LINE	L1	367	6148	-6	3
chr5	101009646	101009647	chunk0155_438_1	41.98897	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	101009468	101010066	-80528193	+	MLT2F	LTR	ERVL	8	663	0	3
chr5	101537807	101537808	chunk0155_443_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	101537630	101539139	-79999120	+	L1PA13	LINE	L1	1152	2645	-4140	3
chr5	101603809	101603810	chunk0155_444_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	101602370	101604083	-79934176	+	L1MD1	LINE	L1	3815	5496	-628	3
chr5	101632286	101632287	chunk0155_445_1	5.28628	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	101632018	101633651	-79904608	-	MSTA-int	LTR	ERVL-MaLR	0	1631	1	3
chr5	101715626	101715627	chunk0155_451_1	106.3322	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	101710268	101716405	-79821854	-	L1PA6	LINE	L1	-18	6309	182	3
chr5	101753459	101753460	chunk0155_456_1	9.47031	AR_DHT_Control	chr5	101753095	101753579	-79784680	+	HAL1b	LINE	L1	613	1104	-1317	3
chr5	101785333	101785334	chunk0155_464_1	7.04615	AR_DHT_Control	chr5	101785098	101785514	-79752745	-	L2c	LINE	L2	-35	3352	2935	3
chr5	101863263	101863264	chunk0156_3_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	101862424	101863900	-79674359	+	L1PA13	LINE	L1	3077	4561	-2205	3
chr5	101932788	101932789	chunk0156_7_1	136.0499	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	101931294	101933632	-79604627	+	L1MC3	LINE	L1	5099	7728	-154	3
chr5	102036029	102036030	chunk0156_12_1	28.05183	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	102036003	102036471	-79501788	-	LTR80A	LTR	ERVL	0	583	5	3
chr5	102037337	102037338	chunk0156_13_1	30.96061	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102037278	102037526	-79500733	+	LTR82A	LTR	ERVL	90	338	-534	3
chr5	102217001	102217002	chunk0156_20_1	16.505	AR_DHT_Control	chr5	102216553	102217096	-79321163	+	MER67C	LTR	ERV1	9	514	0	3
chr5	102222804	102222805	chunk0156_21_1	11.6878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102222237	102223000	-79315259	+	Tigger1	DNA	TcMar-Tigger	1649	2418	0	3
chr5	102231087	102231088	chunk0156_22_1	47.4526	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102230869	102231530	-79306729	+	L1MC4a	LINE	L1	6833	7558	-324	3
chr5	102301569	102301570	chunk0156_26_1	7.86105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102300921	102301653	-79236606	+	L1MEc	LINE	L1	1696	2423	-3977	3
chr5	102368795	102368796	chunk0156_28_1	37.8763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102368665	102369163	-79169096	-	Tigger3	DNA	TcMar-Tigger	-2503	526	1	3
chr5	102379423	102379424	chunk0156_29_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102379081	102380103	-79158156	-	L1ME3A	LINE	L1	-759	5387	4262	3
chr5	102461823	102461824	chunk0156_30_1	24.4548	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	102461469	102461835	-79076424	+	L1ME3G	LINE	L1	4691	5064	-1082	3
chr5	102487364	102487365	chunk0156_31_1	8.46955	AR_DHT_Control	chr5	102485843	102488091	-79050168	-	BLACKJACK	DNA	hAT-Blackjack	-448	2521	3	3
chr5	102738294	102738295	chunk0156_42_1	9.74833	AR_DHT_Control	chr5	102737764	102738695	-78799564	+	L1MD1	LINE	L1	5249	6241	-1	3
chr5	103109951	103109952	chunk0156_51_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	103109828	103110821	-78427438	+	L1M5	LINE	L1	4728	5738	-424	3
chr5	103240816	103240817	chunk0156_56_1	11.1716	AR_DHT_Control	chr5	103239894	103240883	-78297376	+	L1ME1	LINE	L1	5129	6164	-15	3
chr5	103553527	103553528	chunk0156_69_1	56.8447	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	103553138	103553802	-77984457	+	L1ME3C	LINE	L1	5129	5833	-290	3
chr5	103673051	103673052	chunk0156_71_1	8.84223	AR_DHT_Control	chr5	103672936	103673071	-77865188	-	MIRc	SINE	MIR	-48	160	5	3
chr5	104362237	104362238	chunk0156_85_1	8.27376	AR_DHT_Control	chr5	104362103	104362359	-77175900	+	MER57C1	LTR	ERV1	137	385	0	3
chr5	104498711	104498712	chunk0156_86_1	8.27376	AR_DHT_Control	chr5	104498335	104499247	-77039012	+	L2	LINE	L2	195	1208	-2211	3
chr5	104559583	104559584	chunk0156_87_1	27.7214	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	104558527	104560812	-76977447	-	L1MC4a	LINE	L1	-21	7861	5510	3
chr5	104582478	104582479	chunk0156_88_1	9.90105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	104580443	104583716	-76954543	-	L1MC3	LINE	L1	-48	7737	4282	3
chr5	104652898	104652899	chunk0156_89_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	104652112	104655549	-76882710	+	L1MA4A	LINE	L1	728	4306	-3256	3
chr5	104698876	104698877	chunk0156_90_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	104697842	104699351	-76838908	+	L1PA15-16	LINE	L1	1	1257	-5596	3
chr5	105074133	105074134	chunk0156_101_1	7.36432	AR_DHT_Control	chr5	105074071	105074247	-76464012	+	LTR81	LTR	Gypsy	772	975	-418	3
chr5	105261442	105261443	chunk0156_104_1	69.93125	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	105261344	105261639	-76276620	+	MER90a	LTR	ERV1	1	282	-332	3
chr5	105392386	105392387	chunk0156_106_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	105391971	105393225	-76145034	-	LTR2752	LTR	ERV1	0	1263	1	3
chr5	105530819	105530820	chunk0156_110_1	9.01771	AR_DHT_Control	chr5	105530613	105530957	-76007302	-	LTR16	LTR	ERVL	-32	406	37	3
chr5	105569834	105569835	chunk0156_111_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	105568608	105570149	-75968110	+	L1MB7	LINE	L1	3236	4846	-1798	3
chr5	105616888	105616889	chunk0156_112_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	105616875	105617038	-75921221	+	MIRb	SINE	MIR	23	203	-5	3
chr5	105846577	105846578	chunk0156_114_1	7.14391	AR_DHT_Control	chr5	105844035	105847113	-75691146	+	MER66-int	LTR	ERV1	3145	6105	-571	3
chr5	105898992	105898993	chunk0156_116_1	303.3949	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	105898990	105899024	-75639235	+	(AACA)n	Simple_repeat	Simple_repeat	1	34	0	3
chr5	106465605	106465606	chunk0156_121_1	11.6878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	106465573	106465713	-75072546	-	MamRTE1	LINE	RTE-BovB	-568	3244	3091	3
chr5	106495566	106495567	chunk0156_122_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	106494852	106495570	-75042689	+	L1M5	LINE	L1	3432	4231	-1915	3
chr5	106495566	106495567	chunk0156_122_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	106495563	106496154	-75042105	+	L1MD2	LINE	L1	5728	6304	-55	3
chr5	106730805	106730806	chunk0156_129_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	106730027	106736318	-74801941	+	L1PREC2	LINE	L1	14	6393	-387	3
chr5	106780430	106780431	chunk0156_130_1	8.83557	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	106779069	106782567	-74755692	+	L1MA3	LINE	L1	17	3620	-3945	3
chr5	107230346	107230347	chunk0156_144_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	107230192	107230362	-74307897	+	MER5A	DNA	hAT-Charlie	1	188	-1	3
chr5	107352097	107352098	chunk0156_151_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	107350712	107352449	-74185810	-	L1MA3	LINE	L1	-5063	2502	701	3
chr5	107557143	107557144	chunk0156_165_1	14.0461	AR_DHT_Control	chr5	107557122	107557260	-73980999	+	L2b	LINE	L2	3226	3369	-6	3
chr5	107599171	107599172	chunk0156_169_1	14.52569	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	107599143	107599597	-73938662	+	L1MC5a	LINE	L1	422	902	-1875	3
chr5	107630548	107630549	chunk0156_172_1	17.77308	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	107630228	107631152	-73907107	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	274	3
chr5	107855239	107855240	chunk0156_185_1	9.02033	AR_DHT_Control	chr5	107855007	107855481	-73682778	-	LTR40b	LTR	ERVL	-1	461	1	3
chr5	107906455	107906456	chunk0156_189_1	111.2369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	107906409	107906615	-73631644	-	MIRb	SINE	MIR	-7	261	44	3
chr5	107945379	107945380	chunk0156_196_1	57.0689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	107944788	107945828	-73592431	+	L1ME3Cz	LINE	L1	4990	5607	-516	3
chr5	107956311	107956312	chunk0156_197_1	122.354	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	107956221	107956368	-73581891	+	MER5A	DNA	hAT-Charlie	2	189	0	3
chr5	107977732	107977733	chunk0156_202_1	96.3386	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	107977704	107977747	-73560512	+	Charlie4z	DNA	hAT-Charlie	83	125	-42	3
chr5	108003426	108003427	chunk0156_206_1	9.44294	AR_DHT_Control	chr5	108003181	108004231	-73534028	+	L1MEd	LINE	L1	444	1538	-5548	3
chr5	108259498	108259499	chunk0156_224_1	14.24896	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108259417	108259541	-73278718	+	MIRc	SINE	MIR	1	131	-137	3
chr5	108263455	108263456	chunk0156_225_1	16.1233	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108263428	108263507	-73274752	+	Charlie4a	DNA	hAT-Charlie	2	85	-423	3
chr5	108279006	108279007	chunk0156_226_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	108277903	108284700	-73253559	+	L1PB4	LINE	L1	10	6846	-12	3
chr5	108282800	108282801	chunk0156_227_1	60.1326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	108277903	108284700	-73253559	+	L1PB4	LINE	L1	10	6846	-12	3
chr5	108286292	108286293	chunk0156_229_1	8.3626	AR_DHT_Control	chr5	108285826	108288284	-73249975	+	L1PA15	LINE	L1	3677	6165	0	3
chr5	108287222	108287223	chunk0156_230_1	7.62285	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108285826	108288284	-73249975	+	L1PA15	LINE	L1	3677	6165	0	3
chr5	108371496	108371497	chunk0156_237_1	10.8114	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108371428	108371528	-73166731	-	MER58A	DNA	hAT-Charlie	-119	105	4	3
chr5	108378774	108378775	chunk0156_238_1	13.1005	AR_DHT_Control	chr5	108378732	108378869	-73159390	-	L2b	LINE	L2	0	3426	3270	3
chr5	108697190	108697191	chunk0156_244_1	21.98147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108697084	108697249	-72841010	+	MER58A	DNA	hAT-Charlie	2	224	0	3
chr5	108781842	108781843	chunk0156_247_1	16.30922	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108781491	108782285	-72755974	-	L1MC1	LINE	L1	-5677	831	33	3
chr5	108842523	108842524	chunk0156_249_1	34.4808	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108842325	108843044	-72695215	+	L1PB	LINE	L1	5065	5789	-362	3
chr5	108876383	108876384	chunk0156_250_1	8.27376	AR_DHT_Control	chr5	108876110	108876653	-72661606	+	Cheshire	DNA	hAT-Charlie	1	549	-1871	3
chr5	108932881	108932882	chunk0156_251_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	108932025	108934188	-72604071	-	L1PA7	LINE	L1	-3	6151	4032	3
chr5	109275687	109275688	chunk0156_260_1	17.47853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	109273465	109275771	-72262488	+	L1MA8	LINE	L1	4789	7710	0	3
chr5	109349359	109349360	chunk0156_262_1	8.18895	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	109349208	109349868	-72188391	+	LTR41	LTR	ERVL	1	716	-52	3
chr5	109365474	109365475	chunk0156_263_1	8.08101	AR_DHT_Control	chr5	109365309	109365528	-72172731	+	L1ME4b	LINE	L1	550	765	-127	3
chr5	109654369	109654370	chunk0156_273_1	157.4779	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	109654311	109654401	-71883858	-	MER81	DNA	hAT-Blackjack	-4	110	1	3
chr5	109831224	109831225	chunk0156_277_1	4.38465	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	109831038	109831254	-71707005	+	MIR	SINE	MIR	12	225	-43	3
chr5	109897251	109897252	chunk0156_279_1	18.77084	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	109897194	109897389	-71640870	-	L1M5	LINE	L1	-1191	4955	4761	3
chr5	109901213	109901214	chunk0156_280_1	4.83274	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	109901205	109901309	-71636950	+	MIR3	SINE	MIR	41	149	-119	3
chr5	109928067	109928068	chunk0156_283_1	10.5451	AR_DHT_Control	chr5	109927766	109928075	-71610184	-	MLT1A0	LTR	ERVL-MaLR	-50	315	1	3
chr5	110000215	110000216	chunk0156_289_1	102.7483	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	110000209	110000340	-71537919	+	L2b	LINE	L2	3249	3380	-7	3
chr5	110018081	110018082	chunk0156_290_1	14.1213	AR_DHT_Control	chr5	110018050	110018230	-71520029	+	L1M3	LINE	L1	4856	5052	-1088	3
chr5	110069949	110069950	chunk0156_294_1	7.36432	AR_DHT_Control	chr5	110068207	110073399	-71464860	-	L1PA13	LINE	L1	-1255	5206	3	3
chr5	110159880	110159881	chunk0156_298_1	10.3813	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	110159820	110159996	-71378263	+	Tigger18a	DNA	TcMar-Tigger	645	824	-28	3
chr5	110558663	110558664	chunk0156_304_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	110558329	110559104	-70979155	-	L1PA13	LINE	L1	-5511	1275	496	3
chr5	110588753	110588754	chunk0156_306_1	26.71071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	110588554	110588877	-70949382	+	L3	LINE	CR1	3755	4099	0	3
chr5	110703675	110703676	chunk0156_308_1	15.89067	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	110700828	110704480	-70833779	+	ERV24B_Prim-int	LTR	ERV1	2310	5925	-1688	3
chr5	111061582	111061583	chunk0156_315_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	111061388	111061613	-70476646	-	MER30	DNA	hAT-Charlie	0	230	3	3
chr5	111402176	111402177	chunk0156_321_1	8.90544	AR_DHT_Control	chr5	111401697	111402311	-70135948	-	LTR50	LTR	ERVL	-117	678	1	3
chr5	111515921	111515922	chunk0156_325_1	16.9582	AR_DHT_Control	chr5	111515886	111516003	-70022256	+	L1PA8	LINE	L1	6050	6166	-6	3
chr5	111790430	111790431	chunk0156_340_1	40.899	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	111790381	111790477	-69747782	+	L1M5	LINE	L1	5607	5705	-419	3
chr5	111915095	111915096	chunk0156_346_1	56.9519	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	111915023	111915411	-69622848	+	LTR16A2	LTR	ERVL	26	495	0	3
chr5	111920923	111920924	chunk0156_347_1	4.88663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	111920452	111921129	-69617130	-	MER61E	LTR	ERV1	-7	772	28	3
chr5	111985132	111985133	chunk0156_349_1	14.3818	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	111985122	111985192	-69553067	-	L2a	LINE	L2	0	3426	3308	3
chr5	112230742	112230743	chunk0156_353_1	6.6833	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112230007	112230856	-69307403	-	L1PB1	LINE	L1	-293	5858	5023	3
chr5	112330070	112330071	chunk0156_354_1	3.58429	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112329924	112330102	-69208157	+	MIRc	SINE	MIR	84	259	-9	3
chr5	112636475	112636476	chunk0156_366_1	18.0683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112636343	112636598	-68901661	+	L2b	LINE	L2	3108	3373	-2	3
chr5	112691923	112691924	chunk0156_368_1	5.82105	AR_DHT_Control	chr5	112691746	112692518	-68845741	+	LTR41	LTR	ERVL	1	767	-1	3
chr5	112762977	112762978	chunk0156_370_1	53.1064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112762846	112763012	-68775247	-	MARNA	DNA	TcMar-Mariner	-239	347	168	3
chr5	112863669	112863670	chunk0156_379_1	17.74203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	112863659	112863942	-68674317	-	AluJb	SINE	Alu	-9	303	1	3
chr5	112963436	112963437	chunk0156_385_1	69.5015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	112963038	112963509	-68574750	+	MLT1D	LTR	ERVL-MaLR	1	435	-70	3
chr5	113215521	113215522	chunk0156_392_1	6.94032	AR_DHT_Control	chr5	113215401	113215787	-68322472	+	MLT1A1	LTR	ERVL-MaLR	2	377	-31	3
chr5	113323232	113323233	chunk0156_393_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	113322830	113323351	-68214908	+	MLT1F	LTR	ERVL-MaLR	7	548	0	3
chr5	113667000	113667001	chunk0156_397_1	57.6283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	113666404	113669650	-67868609	+	L1PB1	LINE	L1	3263	6495	-372	3
chr5	113747557	113747558	chunk0156_398_1	26.3647	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	113747392	113747819	-67790440	+	LTR37B	LTR	ERV1	1	468	0	3
chr5	113920022	113920023	chunk0156_402_1	17.9161	AR_DHT_Control	chr5	113919764	113920232	-67618027	-	MER70A	LTR	ERVL	0	472	1	3
chr5	113998950	113998951	chunk0156_404_1	8.35541	AR_DHT_Control	chr5	113998888	113999258	-67539001	+	L2a	LINE	L2	3038	3426	0	3
chr5	114188521	114188522	chunk0156_407_1	15.96345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	114188454	114189089	-67349170	+	L1M5	LINE	L1	4121	4797	-1349	3
chr5	114197323	114197324	chunk0156_408_1	24.7535	AR_DHT_Control	chr5	114194054	114197482	-67340777	-	L1MB8	LINE	L1	-413	6631	3344	3
chr5	114346369	114346370	chunk0156_418_1	241.0726	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114346349	114347370	-67190889	+	L1MC4a	LINE	L1	6329	7378	-504	3
chr5	114544022	114544023	chunk0156_430_1	24.8336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114543391	114544251	-66994008	+	L1MEg	LINE	L1	2755	3619	-2527	3
chr5	114617993	114617994	chunk0156_434_1	5.82105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114617214	114618055	-66920204	+	L1MC1	LINE	L1	5052	5915	-418	3
chr5	114629107	114629108	chunk0156_435_1	7.14391	AR_DHT_Control	chr5	114628656	114630008	-66908251	+	L1MA6	LINE	L1	4880	6300	0	3
chr5	114669869	114669870	chunk0156_436_1	5.6425	AR_DHT_Control	chr5	114669682	114670419	-66867840	+	LTR82A	LTR	ERVL	2	808	-64	3
chr5	114730766	114730767	chunk0156_441_1	12.1004	AR_DHT_Control	chr5	114730549	114730776	-66807483	-	L2c	LINE	L2	-185	3202	2979	3
chr5	114753630	114753631	chunk0156_442_1	32.14985	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114752297	114754292	-66783967	-	L1MEc	LINE	L1	-3742	2577	416	3
chr5	114839122	114839123	chunk0156_447_1	365.8763	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	114838975	114839631	-66698628	+	L1MA4A	LINE	L1	441	1505	-6061	3
chr5	114868040	114868041	chunk0156_448_1	31.55879	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	114866428	114872869	-66665390	+	L1PA11	LINE	L1	9	7609	0	3
chr5	114907033	114907034	chunk0156_450_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	114906890	114907255	-66631004	-	THE1D	LTR	ERVL-MaLR	0	381	1	3
chr5	114921376	114921377	chunk0156_451_1	19.8997	AR_DHT_Control	chr5	114919976	114921764	-66616495	+	L1P1	LINE	L1	2754	4553	-1593	3
chr5	114969883	114969884	chunk0156_455_1	150.0325	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	114969051	114970098	-66568161	-	L1MC4a	LINE	L1	-2264	5686	4649	3
chr5	115053178	115053179	chunk0156_459_1	21.3512	AR_DHT_Control	chr5	115053069	115053483	-66484776	-	L2b	LINE	L2	-8	3367	2919	3
chr5	115197620	115197621	chunk0157_9_1	26.5545	AR_DHT_Control	chr5	115196230	115197621	-66340638	+	L1PBa	LINE	L1	1392	2849	-4014	3
chr5	115290957	115290958	chunk0157_12_1	13.7008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	115289982	115291556	-66246703	-	L1M4	LINE	L1	-971	5673	4082	3
chr5	115292757	115292758	chunk0157_13_1	5.23393	AR_DHT_Control	chr5	115291551	115292958	-66245301	-	L1M4	LINE	L1	-5371	2146	667	3
chr5	115497581	115497582	chunk0157_21_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	115497541	115497664	-66040595	-	LTR67B	LTR	ERVL	-472	148	24	3
chr5	115541765	115541766	chunk0157_24_1	11.34254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	115541468	115541916	-65996343	+	L1ME4b	LINE	L1	302	768	-124	3
chr5	115558744	115558745	chunk0157_28_1	193.1326	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	115558694	115558803	-65979456	+	MamRTE1	LINE	RTE-BovB	171	276	-3536	3
chr5	115589013	115589014	chunk0157_29_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	115588826	115589056	-65949203	+	LTR67B	LTR	ERVL	390	620	0	3
chr5	115626296	115626297	chunk0157_31_1	4.33257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	115626286	115626387	-65911872	-	AluSz6	SINE	Alu	0	312	213	3
chr5	115648871	115648872	chunk0157_32_1	13.1346	AR_DHT_Control	chr5	115648868	115649138	-65889121	-	L1M5	LINE	L1	-484	5640	5346	3
chr5	115739127	115739128	chunk0157_33_1	16.79701	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	115738242	115739340	-65798919	-	MER57A-int	LTR	ERV1	0	6187	5095	3
chr5	115762605	115762606	chunk0157_35_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	115762230	115763858	-65774401	-	THE1D-int	LTR	ERVL-MaLR	0	1631	1	3
chr5	115979130	115979131	chunk0157_47_1	6.45888	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	115978370	115979666	-65558593	-	LTR78	LTR	ERV1	0	1304	1	3
chr5	116042265	116042266	chunk0157_52_1	46.39634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116042130	116042361	-65495898	+	L2c	LINE	L2	3146	3378	-9	3
chr5	116062566	116062567	chunk0157_54_1	8.58634	AR_DHT_Control	chr5	116062452	116062578	-65475681	+	MER91C	DNA	hAT-Tip100	1	122	-18	3
chr5	116115415	116115416	chunk0157_56_1	16.55331	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116112685	116115453	-65422806	-	L1PB4	LINE	L1	-3953	2933	83	3
chr5	116193520	116193521	chunk0157_60_1	40.9319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116191111	116195717	-65342542	+	L1PB1	LINE	L1	582	5263	-1599	3
chr5	116199007	116199008	chunk0157_63_1	80.3681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	116198360	116199530	-65338729	-	L1MC1	LINE	L1	-6	6502	5261	3
chr5	116275572	116275573	chunk0157_66_1	57.4565	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	116275309	116275617	-65262642	+	L2c	LINE	L2	3039	3378	-9	3
chr5	116425076	116425077	chunk0157_75_1	16.64398	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116424885	116425108	-65113151	+	L2b	LINE	L2	3160	3382	-5	3
chr5	116585280	116585281	chunk0157_88_1	21.625	AR_DHT_Control	chr5	116585115	116585508	-64952751	-	MLT1A	LTR	ERVL-MaLR	-4	370	1	3
chr5	116631233	116631234	chunk0157_90_1	11.31512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	116631120	116631445	-64906814	+	L1ME3G	LINE	L1	320	667	-257	3
chr5	116720637	116720638	chunk0157_95_1	65.3511	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	116720602	116720642	-64817617	+	(AAC)n	Simple_repeat	Simple_repeat	1	43	0	3
chr5	116736805	116736806	chunk0157_98_1	19.4365	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	116736616	116737165	-64801094	-	L1ME4b	LINE	L1	-334	558	2	3
chr5	116799595	116799596	chunk0157_106_1	22.534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116799462	116799678	-64738581	-	MER58A	DNA	hAT-Charlie	0	224	6	3
chr5	116859027	116859028	chunk0157_112_1	22.5263	AR_DHT_Control	chr5	116858972	116859503	-64678756	+	LTR48B	LTR	ERV1	46	615	-29	3
chr5	116882778	116882779	chunk0157_114_1	159.3123	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116882684	116882881	-64655378	-	L2a	LINE	L2	0	3426	3245	3
chr5	116896457	116896458	chunk0157_117_1	46.925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	116896183	116896676	-64641583	-	L1MC1	LINE	L1	-325	6008	5511	3
chr5	117096515	117096516	chunk0157_122_1	15.82808	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	117096514	117096553	-64441706	-	MLT2C1	LTR	ERVL	0	397	358	3
chr5	117290392	117290393	chunk0157_129_1	12.5708	AR_DHT_Control	chr5	117289999	117290530	-64247729	+	L4_A_Mam	LINE	RTE-X	3732	4255	-735	3
chr5	117426677	117426678	chunk0157_136_1	23.0759	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	117426296	117426830	-64111429	-	L1ME4b	LINE	L1	-316	576	1	3
chr5	117487157	117487158	chunk0157_140_1	46.50178	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	117486994	117487266	-64050993	+	MER130	DNA	DNA	764	1031	-563	3
chr5	117562194	117562195	chunk0157_145_1	5.30168	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	117562159	117562370	-63975889	+	L1MC	LINE	L1	4586	4797	-1349	3
chr5	117645578	117645579	chunk0157_147_1	24.4102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	117645362	117645838	-63892421	+	L1ME1	LINE	L1	924	1402	-5021	3
chr5	117726445	117726446	chunk0157_149_1	14.55894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	117726205	117726817	-63811442	+	Tigger3	DNA	TcMar-Tigger	2383	3029	0	3
chr5	117800541	117800542	chunk0157_153_1	56.781	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	117800284	117802209	-63736050	+	L1PA16	LINE	L1	3896	5834	-332	3
chr5	117830326	117830327	chunk0157_154_1	6.48643	AR_DHT_Control	chr5	117827134	117830344	-63707915	-	L1PA8A	LINE	L1	-3230	3101	4	3
chr5	117830681	117830682	chunk0157_155_1	10.3257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	117830339	117831198	-63707061	-	L1PREC2	LINE	L1	-2527	3619	2747	3
chr5	117950605	117950606	chunk0157_159_1	16.70752	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	117949869	117951095	-63587164	+	L1MC4	LINE	L1	6356	7915	-1389	3
chr5	118004464	118004465	chunk0157_161_1	5.73469	AR_DHT_Control	chr5	118004373	118004787	-63533472	+	LTR16D1	LTR	ERVL	252	675	0	3
chr5	118060717	118060718	chunk0157_169_1	40.4895	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	118060276	118061345	-63476914	-	L1MA8	LINE	L1	-6	6285	5200	3
chr5	118093510	118093511	chunk0157_171_1	6.33484	AR_DHT_Control	chr5	118093120	118093991	-63444268	+	L1MCa	LINE	L1	3725	4663	-1658	3
chr5	118175194	118175195	chunk0157_172_1	7.74912	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	118175030	118175403	-63362856	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr5	118413610	118413611	chunk0157_176_1	9.90105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	118413197	118413916	-63124343	+	L1MA9	LINE	L1	3108	3950	-2196	3
chr5	118489840	118489841	chunk0157_177_1	5.6425	AR_DHT_Control	chr5	118489722	118489893	-63048366	+	MLT1I	LTR	ERVL-MaLR	65	238	-173	3
chr5	118699319	118699320	chunk0157_184_1	30.1942	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	118699295	118699406	-62838853	-	MIR	SINE	MIR	-15	247	103	3
chr5	118755381	118755382	chunk0157_186_1	14.1561	AR_DHT_Control	chr5	118755302	118755390	-62782869	+	L2c	LINE	L2	3250	3332	-55	3
chr5	118906085	118906086	chunk0157_192_1	17.61025	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	118905858	118906856	-62631403	+	L1ME1	LINE	L1	5129	6154	-25	3
chr5	118923566	118923567	chunk0157_193_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	118923164	118923843	-62614416	+	MER50B	LTR	ERV1	1	697	0	3
chr5	118937577	118937578	chunk0157_194_1	7.3092	AR_DHT_Control	chr5	118937411	118937904	-62600355	+	MER73	LTR	ERVL	1	514	-130	3
chr5	118967393	118967394	chunk0157_195_1	74.2733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	118967081	118968363	-62569896	+	L1MC4a	LINE	L1	6401	7731	-151	3
chr5	119009310	119009311	chunk0157_199_1	6.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119008943	119009567	-62528692	-	MER92B	LTR	ERV1	0	636	1	3
chr5	119050831	119050832	chunk0157_202_1	19.84522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119050705	119050864	-62487395	+	LTR26B	LTR	ERV1	372	531	0	3
chr5	119179993	119179994	chunk0157_208_1	58.0355	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	119179900	119180065	-62358194	-	MER58B	DNA	hAT-Charlie	0	341	172	3
chr5	119290650	119290651	chunk0157_213_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	119290158	119290684	-62247575	-	MLT1F	LTR	ERVL-MaLR	0	548	7	3
chr5	119386380	119386381	chunk0157_222_1	10.92653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	119386171	119386499	-62151760	-	LTR37A	LTR	ERV1	0	426	25	3
chr5	119434457	119434458	chunk0157_226_1	11.1716	AR_DHT_Control	chr5	119434381	119434776	-62103483	+	MER51B	LTR	ERV1	1	377	0	3
chr5	119441894	119441895	chunk0157_227_1	10.8743	AR_DHT_Control	chr5	119439179	119445196	-62093063	+	L1PA6	LINE	L1	134	6149	-5	3
chr5	119446685	119446686	chunk0157_228_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119446129	119447266	-62090993	+	HERVIP10FH-int	LTR	ERV1	1975	3119	-1983	3
chr5	119537809	119537810	chunk0157_237_1	82.1631	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119537643	119537858	-62000401	-	MER58A	DNA	hAT-Charlie	-8	216	1	3
chr5	119555874	119555875	chunk0157_239_1	10.1791	AR_DHT_Control	chr5	119555729	119555923	-61982336	+	LTR86A2	LTR	ERVL	208	408	-100	3
chr5	119785258	119785259	chunk0157_246_1	54.12134	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	119785037	119785515	-61752744	+	MER68	LTR	ERVL	1	563	0	3
chr5	119810333	119810334	chunk0157_249_1	28.1203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	119809909	119810361	-61727898	-	L1MA1	LINE	L1	-7085	480	24	3
chr5	119876798	119876799	chunk0157_252_1	19.06066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	119876772	119876956	-61661303	-	MIRb	SINE	MIR	-42	226	38	3
chr5	119989397	119989398	chunk0157_258_1	6.48643	AR_DHT_Control	chr5	119987772	119992292	-61545967	-	L1PA7	LINE	L1	-1619	4527	5	3
chr5	120007819	120007820	chunk0157_261_1	31.9659	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	120007756	120007940	-61530319	-	L3b	LINE	CR1	-4	5228	5017	3
chr5	120084321	120084322	chunk0157_266_1	153.221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	120084298	120084838	-61453421	+	MLT2B1	LTR	ERVL	1	549	-7	3
chr5	120100363	120100364	chunk0157_267_1	6.45888	AR_DHT_Control	chr5	120100108	120101387	-61436872	-	L1MA5	LINE	L1	-299	6001	4700	3
chr5	120105214	120105215	chunk0157_269_1	12.26361	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	120105175	120105404	-61432855	+	MIR	SINE	MIR	23	248	-14	3
chr5	120120485	120120486	chunk0157_271_1	41.734	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	120120423	120120807	-61417452	+	L1ME1	LINE	L1	5803	6178	-1	3
chr5	120433669	120433670	chunk0157_275_1	36.2315	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	120433252	120434341	-61103918	+	L1MC1	LINE	L1	5268	6315	-18	3
chr5	120439773	120439774	chunk0157_277_1	20.6373	AR_DHT_Control	chr5	120439574	120439886	-61098373	+	MER57C1	LTR	ERV1	1	407	-4	3
chr5	120575465	120575466	chunk0157_278_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	120575354	120575879	-60962380	+	L1M2	LINE	L1	3687	4216	-1927	3
chr5	120600710	120600711	chunk0157_279_1	16.9805	AR_DHT_Control	chr5	120600567	120606056	-60932203	-	L1PA16	LINE	L1	-3	6783	1214	3
chr5	120661195	120661196	chunk0157_283_1	7.76985	AR_DHT_Control	chr5	120661160	120661627	-60876632	-	HAL1b	LINE	L1	-797	1624	1126	3
chr5	120681914	120681915	chunk0157_284_1	20.0108	AR_DHT_Control	chr5	120681113	120681960	-60856299	-	L1MCc	LINE	L1	-4956	2942	2067	3
chr5	121101160	121101161	chunk0157_300_1	20.11962	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	121099860	121101822	-60436437	+	L1MC1	LINE	L1	4500	6508	0	3
chr5	121737172	121737173	chunk0157_311_1	190.3728	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	121736802	121737277	-59800982	-	Tigger17c	DNA	TcMar-Tigger	-643	545	101	3
chr5	121979851	121979852	chunk0157_317_1	10.0059	AR_DHT_Control	chr5	121979575	121980133	-59558126	-	LTR80A	LTR	ERVL	0	583	3	3
chr5	122004299	122004300	chunk0157_324_1	308.6304	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	122004219	122004501	-59533758	-	L1M3e	LINE	L1	-1084	6478	6196	3
chr5	122494054	122494055	chunk0157_339_1	16.9357	AR_DHT_Control	chr5	122493926	122494188	-59044071	+	L2b	LINE	L2	3108	3375	0	3
chr5	122607204	122607205	chunk0157_342_1	9.02033	AR_DHT_Control	chr5	122607144	122607285	-58930974	+	L1M5	LINE	L1	2687	2835	-3311	3
chr5	122608008	122608009	chunk0157_343_1	8.2993	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	122607932	122608194	-58930065	+	L1MC3	LINE	L1	7287	7572	-213	3
chr5	122750140	122750141	chunk0157_344_1	6.14829	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	122749952	122750197	-58788062	-	MIR	SINE	MIR	-1	261	35	3
chr5	122858535	122858536	chunk0157_347_1	68.8589	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	122858467	122858826	-58679433	-	L1MC5	LINE	L1	-2240	7064	6705	3
chr5	122991361	122991362	chunk0157_350_1	10.0841	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	122991361	122991417	-58546842	+	Plat_L3	LINE	CR1	1162	1219	-2367	3
chr5	123313694	123313695	chunk0157_356_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	123311971	123314164	-58224095	-	L1PA10	LINE	L1	-4749	3414	2	3
chr5	123538135	123538136	chunk0157_367_1	20.99626	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	123537690	123538520	-57999739	-	L1ME2	LINE	L1	-5	7019	6183	3
chr5	123712289	123712290	chunk0157_375_1	35.5198	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	123712102	123713257	-57825002	-	L1M4	LINE	L1	-5091	2426	1209	3
chr5	123778723	123778724	chunk0157_376_1	6.35715	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	123778583	123779421	-57758838	-	LTR1B1	LTR	ERV1	0	818	1	3
chr5	124020283	124020284	chunk0157_385_1	26.7266	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	124019910	124021003	-57517256	-	L1MEg	LINE	L1	-4562	2475	1114	3
chr5	124023230	124023231	chunk0157_387_1	18.52527	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124022933	124023329	-57514930	-	Charlie7	DNA	hAT-Charlie	-1923	689	289	3
chr5	124094967	124094968	chunk0157_391_1	21.85475	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124094384	124095947	-57442312	-	L1PB1	LINE	L1	-360	5791	4307	3
chr5	124121909	124121910	chunk0157_392_1	9.90633	AR_DHT_Control	chr5	124121692	124122044	-57416215	+	LTR107_Mam	LTR	LTR	5	389	-181	3
chr5	124176898	124176899	chunk0157_397_1	30.07009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	124176709	124177131	-57361128	+	LTR16A1	LTR	ERVL	9	456	0	3
chr5	124246296	124246297	chunk0157_400_1	9.68843	AR_DHT_Control	chr5	124245050	124249734	-57288525	+	L1PB3	LINE	L1	2088	6870	0	3
chr5	124420681	124420682	chunk0157_408_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	124420172	124421169	-57117090	+	L1M3e	LINE	L1	24	1037	-6452	3
chr5	124465661	124465662	chunk0157_409_1	13.3536	AR_DHT_Control	chr5	124465640	124465673	-57072586	+	(TGAA)n	Simple_repeat	Simple_repeat	1	34	0	3
chr5	124617661	124617662	chunk0157_416_1	69.7719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	124617579	124618109	-56920150	-	MLT1K	LTR	ERVL-MaLR	-8	587	2	3
chr5	124689846	124689847	chunk0157_427_1	243.0853	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124689516	124690555	-56847704	+	L1MC1	LINE	L1	5260	6333	0	3
chr5	124765367	124765368	chunk0157_431_1	22.26714	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124765285	124765393	-56772866	-	MIRb	SINE	MIR	-10	258	144	3
chr5	124847979	124847980	chunk0157_437_1	12.19095	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	124847945	124848182	-56690077	+	UCON29	DNA	PiggyBac?	111	341	-98	3
chr5	124856185	124856186	chunk0157_440_1	32.97257	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124856152	124856443	-56681816	+	L2b	LINE	L2	3031	3368	-7	3
chr5	124932990	124932991	chunk0157_447_1	34.44793	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	124932877	124933230	-56605029	-	ERV3-16A3_I-int	LTR	ERVL	-2956	2040	1682	3
chr5	125229894	125229895	chunk0158_12_1	8.90544	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	125229417	125230367	-56307892	-	L1MC3	LINE	L1	-7	7778	6808	3
chr5	125244124	125244125	chunk0158_14_1	37.52763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	125241500	125245186	-56293073	-	L1PA15	LINE	L1	-132	6560	2878	3
chr5	125321851	125321852	chunk0158_17_1	9.49153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	125321807	125321902	-56216357	+	GA-rich	Low_complexity	Low_complexity	1	100	0	3
chr5	125340171	125340172	chunk0158_18_1	17.68826	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	125340140	125340365	-56197894	-	MIR	SINE	MIR	-4	264	2	3
chr5	125354795	125354796	chunk0158_19_1	39.2606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	125353869	125358501	-56179758	-	L1PB1	LINE	L1	-2047	4815	1	3
chr5	125427673	125427674	chunk0158_24_1	15.81751	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	125427333	125429311	-56108948	+	Tigger2	DNA	TcMar-Tigger	2	2010	-708	3
chr5	125602447	125602448	chunk0158_34_1	40.0482	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	125602306	125602526	-55935733	+	MER58A	DNA	hAT-Charlie	2	224	0	3
chr5	125602894	125602895	chunk0158_35_1	6.03698	AR_DHT_Control	chr5	125602881	125603015	-55935244	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1069	3
chr5	125662503	125662504	chunk0158_41_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	125661455	125662963	-55875296	-	L1PA16	LINE	L1	0	6166	4614	3
chr5	125791924	125791925	chunk0158_42_1	13.2796	AR_DHT_Control	chr5	125791227	125792557	-55745702	-	ERV24_Prim-int	LTR	ERV1	-290	7285	5948	3
chr5	125834026	125834027	chunk0158_45_1	10.0617	AR_DHT_Control	chr5	125833763	125834135	-55704124	-	MLT1A1	LTR	ERVL-MaLR	0	408	1	3
chr5	125913602	125913603	chunk0158_46_1	6.01382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	125909200	125914283	-55623976	-	L1MA3	LINE	L1	-2075	5490	21	3
chr5	125949356	125949357	chunk0158_47_1	6.48643	AR_DHT_Control	chr5	125949346	125949417	-55588842	-	L1MA5	LINE	L1	-2	6301	6230	3
chr5	126009829	126009830	chunk0158_58_1	23.2346	AR_DHT_Control	chr5	126009759	126009923	-55528336	-	MLT1L	LTR	ERVL-MaLR	-397	213	1	3
chr5	126105131	126105132	chunk0158_63_1	28.82773	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	126104727	126105488	-55432771	+	ERVL-E-int	LTR	ERVL	2904	3764	-1950	3
chr5	126219732	126219733	chunk0158_68_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126219227	126220384	-55317875	+	L1PA14	LINE	L1	3502	4654	-1492	3
chr5	126326757	126326758	chunk0158_72_1	37.7147	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	126326564	126327336	-55210923	+	L1ME4b	LINE	L1	43	871	-21	3
chr5	126353285	126353286	chunk0158_75_1	13.67903	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126353073	126353482	-55184777	+	L1MC4	LINE	L1	7362	7799	-243	3
chr5	126518908	126518909	chunk0158_85_1	5.82105	AR_DHT_Control	chr5	126518682	126518985	-55019274	+	AluSx1	SINE	Alu	1	303	-9	3
chr5	126537031	126537032	chunk0158_87_1	15.6663	AR_DHT_Control	chr5	126536679	126537249	-55001010	+	L1MC4	LINE	L1	6712	7085	-957	3
chr5	126566956	126566957	chunk0158_88_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126566908	126567418	-54970841	+	LTR10C	LTR	ERV1	1	591	0	3
chr5	126600125	126600126	chunk0158_90_1	14.10678	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	126599795	126600372	-54937887	+	LTR10C	LTR	ERV1	6	591	0	3
chr5	126607852	126607853	chunk0158_92_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126607701	126607903	-54930356	+	MIRb	SINE	MIR	63	259	-9	3
chr5	126610097	126610098	chunk0158_93_1	28.93326	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	126610039	126610203	-54928056	+	MER106B	DNA	hAT-Charlie	899	1058	-1	3
chr5	126660149	126660150	chunk0158_98_1	19.23243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	126659833	126660198	-54878061	+	MER4C	LTR	ERV1	90	465	0	3
chr5	126680412	126680413	chunk0158_99_1	8.1827	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	126680235	126680468	-54857791	+	LTR16A1	LTR	ERVL	1	233	-223	3
chr5	126700881	126700882	chunk0158_100_1	19.10559	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126700805	126700947	-54837312	-	MIR	SINE	MIR	-4	258	138	3
chr5	126882281	126882282	chunk0158_112_1	113.0867	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	126882278	126882342	-54655917	-	Mam_R4	LINE	Dong-R4	-355	3454	3391	3
chr5	126887971	126887972	chunk0158_114_1	22.77133	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	126887645	126888085	-54650174	+	L2a	LINE	L2	2927	3426	0	3
chr5	127039012	127039013	chunk0158_126_1	8.76364	AR_DHT_Control	chr5	127039004	127039111	-54499148	-	L2c	LINE	L2	0	3387	3266	3
chr5	127113067	127113068	chunk0158_127_1	24.4548	AR_DHT_Control	chr5	127111278	127113248	-54425011	+	L1PA16	LINE	L1	4133	6151	-15	3
chr5	127179199	127179200	chunk0158_128_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	127178908	127179203	-54359056	+	AluJr4	SINE	Alu	3	291	-21	3
chr5	127197805	127197806	chunk0158_131_1	64.2557	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	127197142	127203292	-54334967	+	L1PA6	LINE	L1	174	6326	-1	3
chr5	127236389	127236390	chunk0158_134_1	246.2978	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	127236271	127236477	-54301782	-	MER58A	DNA	hAT-Charlie	-9	215	1	3
chr5	127386101	127386102	chunk0158_143_1	76.91796	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	127385822	127386137	-54152122	+	AluJr4	SINE	Alu	1	312	0	3
chr5	127461730	127461731	chunk0158_148_1	8.90544	AR_DHT_Control	chr5	127461661	127461840	-54076419	+	MIR	SINE	MIR	77	256	-6	3
chr5	127479759	127479760	chunk0158_149_1	230.803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	127479755	127480099	-54058160	-	L1ME4a	LINE	L1	-194	5930	5554	3
chr5	127515839	127515840	chunk0158_152_1	127.8091	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	127515372	127516077	-54022182	+	L2a	LINE	L2	2593	3425	-1	3
chr5	127549688	127549689	chunk0158_154_1	35.40035	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	127549669	127549886	-53988373	+	MER58A	DNA	hAT-Charlie	3	224	0	3
chr5	127555964	127555965	chunk0158_155_1	26.9423	AR_DHT_Control	chr5	127555361	127556157	-53982102	-	L1MC1	LINE	L1	0	6333	5551	3
chr5	127682691	127682692	chunk0158_169_1	17.90072	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	127682684	127682793	-53855466	+	L1MC5	LINE	L1	9183	9298	-6	3
chr5	127707314	127707315	chunk0158_174_1	5.93091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	127706615	127707336	-53830923	-	L2a	LINE	L2	0	3426	3086	3
chr5	127731287	127731288	chunk0158_175_1	6.48643	AR_DHT_Control	chr5	127729197	127733007	-53805252	+	L1PA10	LINE	L1	2513	6342	-11	3
chr5	127802185	127802186	chunk0158_178_1	8.18895	AR_DHT_Control	chr5	127802124	127802274	-53735985	+	L2c	LINE	L2	3235	3379	-8	3
chr5	127911237	127911238	chunk0158_188_1	41.86033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	127911181	127911370	-53626889	-	L2c	LINE	L2	-10	3377	3200	3
chr5	128046791	128046792	chunk0158_201_1	32.574	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	128043926	128050015	-53488244	+	L1PA6	LINE	L1	177	6319	-8	3
chr5	128156836	128156837	chunk0158_206_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	128156574	128156950	-53381309	-	MLT1J2	LTR	ERVL-MaLR	-8	440	60	3
chr5	128176504	128176505	chunk0158_207_1	8.18895	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	128176496	128176557	-53361702	+	A-rich	Low_complexity	Low_complexity	1	63	0	3
chr5	128199371	128199372	chunk0158_208_1	25.83083	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	128198759	128199497	-53338762	+	MER54A	LTR	ERVL	157	901	0	3
chr5	128218796	128218797	chunk0158_210_1	6.04605	AR_DHT_Control	chr5	128218740	128218990	-53319269	+	LTR37B	LTR	ERV1	203	463	-5	3
chr5	128317235	128317236	chunk0158_211_1	188.1938	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	128316961	128317347	-53220912	+	L2a	LINE	L2	2915	3383	-4	3
chr5	128324509	128324510	chunk0158_213_1	51.992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	128321298	128324604	-53213655	-	L1PA7	LINE	L1	-3	6151	2841	3
chr5	128696003	128696004	chunk0158_224_1	8.8907	AR_DHT_Control	chr5	128695887	128696043	-52842216	-	LTR50	LTR	ERVL	-509	286	119	3
chr5	129855136	129855137	chunk0158_243_1	15.6663	AR_DHT_Control	chr5	129855069	129855175	-51683084	-	MER135	DNA	DNA	-114	114	8	3
chr5	130391771	130391772	chunk0158_245_1	25.27522	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	130391694	130395000	-51143259	+	L1PA7	LINE	L1	2838	6154	0	3
chr5	130802065	130802066	chunk0158_247_1	27.2324	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	130801903	130802160	-50736099	+	MLT1I	LTR	ERVL-MaLR	149	406	-5	3
chr5	130894060	130894061	chunk0158_249_1	15.5235	AR_DHT_Control	chr5	130893878	130895694	-50642565	+	L1PA6	LINE	L1	805	2583	-3736	3
chr5	130914029	130914030	chunk0158_252_1	64.7362	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	130912343	130914868	-50623391	+	L1MA4	LINE	L1	2006	4588	-2974	3
chr5	131015158	131015159	chunk0158_258_1	10.9481	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	131014663	131020611	-50517648	-	L1PB1	LINE	L1	-357	6510	251	3
chr5	131250998	131250999	chunk0158_265_1	48.9571	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	131250884	131251056	-50287203	+	L1MC2	LINE	L1	6170	6337	-7	3
chr5	131303763	131303764	chunk0158_269_1	18.89281	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	131303665	131303829	-50234430	-	L3	LINE	CR1	-152	3947	3767	3
chr5	131368377	131368378	chunk0158_272_1	35.7719	AR_DHT_Control	chr5	131368276	131368582	-50169677	-	L1ME3Cz	LINE	L1	-1252	4894	4578	3
chr5	131553089	131553090	chunk0158_278_1	44.22995	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	131553037	131553315	-49984944	+	L1MCc	LINE	L1	884	1194	-5229	3
chr5	131683945	131683946	chunk0158_282_1	15.25894	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	131683765	131684400	-49853859	-	Tigger17a	DNA	TcMar-Tigger	-1	653	1	3
chr5	131769155	131769156	chunk0158_284_1	19.80284	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	131769155	131769185	-49769074	+	A-rich	Low_complexity	Low_complexity	1	31	0	3
chr5	131866058	131866059	chunk0158_288_1	8.35541	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	131865518	131866688	-49671571	-	L1M2	LINE	L1	-5095	2471	1283	3
chr5	131947661	131947662	chunk0158_289_1	37.5759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	131947601	131947716	-49590543	-	L2b	LINE	L2	-1	3374	3256	3
chr5	132290342	132290343	chunk0158_298_1	19.87297	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	132289813	132290888	-49247371	+	ERVL-E-int	LTR	ERVL	1474	2775	-2892	3
chr5	132363583	132363584	chunk0158_304_1	19.0817	AR_DHT_Control	chr5	132363400	132363973	-49174286	+	L2a	LINE	L2	2849	3425	-1	3
chr5	132450689	132450690	chunk0158_310_1	12.97744	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	132450542	132450815	-49087444	+	L1ME3G	LINE	L1	5602	5808	-316	3
chr5	132505055	132505056	chunk0158_312_1	48.36683	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	132504897	132505243	-49033016	+	Tigger3a	DNA	TcMar-Tigger	1	347	-1	3
chr5	132652149	132652150	chunk0158_315_1	40.24702	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	132651812	132652151	-48886108	+	L2a	LINE	L2	3036	3426	0	3
chr5	132808583	132808584	chunk0158_320_1	30.09809	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	132808556	132808641	-48729618	+	MIRc	SINE	MIR	40	124	-144	3
chr5	132853484	132853485	chunk0158_323_1	60.8031	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	132853479	132853526	-48684733	+	L2a	LINE	L2	3374	3420	-6	3
chr5	132906218	132906219	chunk0158_329_1	152.323	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	132905522	132906755	-48631504	+	L1MB7	LINE	L1	4848	6178	0	3
chr5	133154786	133154787	chunk0158_334_1	6.48643	AR_DHT_Control	chr5	133154781	133155046	-48383213	-	Tigger3a	DNA	TcMar-Tigger	0	348	73	3
chr5	133236788	133236789	chunk0158_335_1	16.393	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	133236704	133237013	-48301246	+	L2a	LINE	L2	3045	3416	-10	3
chr5	133276114	133276115	chunk0158_342_1	64.03605	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	133275773	133276174	-48262085	+	Charlie29a	DNA	hAT-Charlie	295	705	-14	3
chr5	133434489	133434490	chunk0158_349_1	19.18536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	133434295	133435020	-48103239	-	L1ME4a	LINE	L1	-107	6271	5510	3
chr5	133514731	133514732	chunk0158_352_1	5.95444	AR_DHT_Control	chr5	133514225	133515238	-48023021	+	L1M6	LINE	L1	1039	2079	-4417	3
chr5	133759920	133759921	chunk0158_359_1	108.92991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	133759896	133759926	-47778333	+	(CAAA)n	Simple_repeat	Simple_repeat	1	31	0	3
chr5	134279867	134279868	chunk0158_379_1	34.4618	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	134279844	134279911	-47258348	-	L1MEg	LINE	L1	-4601	2732	2660	3
chr5	134488034	134488035	chunk0158_387_1	37.4243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	134487768	134488233	-47050026	-	L1ME1	LINE	L1	-219	5960	5481	3
chr5	134592007	134592008	chunk0158_391_1	6.6833	AR_DHT_Control	chr5	134591947	134592066	-46946193	+	MIRc	SINE	MIR	98	216	-52	3
chr5	134612820	134612821	chunk0158_392_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	134612808	134613396	-46924863	+	LTR10C	LTR	ERV1	1	591	0	3
chr5	134632435	134632436	chunk0158_396_1	6.13992	AR_DHT_Control	chr5	134632410	134632473	-46905786	-	MIR3	SINE	MIR	-61	147	86	3
chr5	134680705	134680706	chunk0158_399_1	7.97574	AR_DHT_Control	chr5	134680638	134680772	-46857487	-	AluSc	SINE	Alu	-7	302	171	3
chr5	134705697	134705698	chunk0158_402_1	45.6663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	134705617	134705862	-46832397	-	L1MB8	LINE	L1	-2	6176	5938	3
chr5	134838759	134838760	chunk0158_408_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	134838664	134838810	-46699449	+	AluJr	SINE	Alu	3	148	-164	3
chr5	135049746	135049747	chunk0158_417_1	17.5939	AR_DHT_Control	chr5	135049556	135050136	-46488123	+	L1MD2	LINE	L1	5687	6349	-10	3
chr5	135168763	135168764	chunk0158_421_1	33.65292	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	135168697	135168840	-46369419	-	Tigger15a	DNA	TcMar-Tigger	-236	479	325	3
chr5	135207257	135207258	chunk0158_425_1	18.2941	AR_DHT_Control	chr5	135207138	135207416	-46330843	-	L1ME3G	LINE	L1	-161	763	475	3
chr5	135289819	135289820	chunk0158_426_1	7.14391	AR_DHT_Control	chr5	135289248	135290018	-46248241	-	L1ME2	LINE	L1	-1433	4713	4004	3
chr5	135295401	135295402	chunk0158_427_1	24.2801	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	135294665	135296177	-46242082	-	L1MC4a	LINE	L1	-8	7874	6332	3
chr5	135362282	135362283	chunk0158_431_1	10.5524	AR_DHT_Control	chr5	135362232	135362387	-46175872	+	L1MD3	LINE	L1	7822	7977	-18	3
chr5	135393325	135393326	chunk0158_434_1	11.856	AR_DHT_Control	chr5	135393045	135393411	-46144848	-	MLT1J2	LTR	ERVL-MaLR	-17	431	1	3
chr5	135618588	135618589	chunk0158_438_1	22.2818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	135616818	135621080	-45917179	-	L1MA4A	LINE	L1	-2354	5208	718	3
chr5	135676971	135676972	chunk0158_440_1	7.77075	AR_DHT_Control	chr5	135676156	135680246	-45858013	-	L1MA4A	LINE	L1	-2673	4889	719	3
chr5	135686383	135686384	chunk0158_441_1	19.3	AR_DHT_Control	chr5	135686317	135686689	-45851570	+	L2c	LINE	L2	2895	3381	-6	3
chr5	135704649	135704650	chunk0158_442_1	29.5418	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	135704587	135704825	-45833434	-	MIR	SINE	MIR	-14	248	17	3
chr5	135731777	135731778	chunk0158_445_1	12.58697	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	135731775	135732004	-45806255	-	HERVH-int	LTR	ERV1	-1894	5819	5590	3
chr5	136321143	136321144	chunk0159_17_1	30.4992	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	136321093	136321198	-45217061	-	MIRb	SINE	MIR	-157	111	4	3
chr5	136480227	136480228	chunk0159_23_1	43.4507	AR_DHT_Control	chr5	136479841	136480647	-45057612	-	L1MA10	LINE	L1	-1	6333	5535	3
chr5	136490928	136490929	chunk0159_24_1	7.69414	AR_DHT_Control	chr5	136488959	136491285	-45046974	-	L1M4	LINE	L1	-5154	2363	16	3
chr5	136607229	136607230	chunk0159_25_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	136606481	136607453	-44930806	+	L1MA6	LINE	L1	17	956	-6609	3
chr5	136812548	136812549	chunk0159_27_1	8.10772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	136811925	136813473	-44724786	+	L1PB1	LINE	L1	4604	6151	0	3
chr5	136905871	136905872	chunk0159_31_1	15.16759	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	136905279	136905960	-44632299	-	L1MEa	LINE	L1	-5410	726	70	3
chr5	137013511	137013512	chunk0159_37_1	15.40605	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	137013429	137013550	-44524709	-	MER103C	DNA	hAT-Charlie	-164	133	7	3
chr5	137059735	137059736	chunk0159_39_1	9.30518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	137059451	137060613	-44477646	+	L1PA15	LINE	L1	4994	6165	0	3
chr5	137143591	137143592	chunk0159_42_1	14.33256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	137143448	137143659	-44394600	+	MIR	SINE	MIR	20	257	-5	3
chr5	137254933	137254934	chunk0159_57_1	57.96037	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	137254861	137255367	-44282892	+	L4_A_Mam	LINE	RTE-X	4228	4789	-201	3
chr5	137284013	137284014	chunk0159_61_1	15.80151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	137283991	137284232	-44254027	-	MIRb	SINE	MIR	-16	252	1	3
chr5	137316171	137316172	chunk0159_67_1	87.1249	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	137316016	137316339	-44221920	-	MLT1A0	LTR	ERVL-MaLR	-19	346	2	3
chr5	137393757	137393758	chunk0159_70_1	23.5929	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	137393754	137393845	-44144414	+	L2a	LINE	L2	3336	3426	0	3
chr5	137610015	137610016	chunk0159_77_1	27.8451	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	137609427	137610481	-43927778	-	L1MB7	LINE	L1	-16	6168	5101	3
chr5	137625157	137625158	chunk0159_80_1	196.1804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	137624954	137625194	-43913065	+	MIRb	SINE	MIR	14	260	-8	3
chr5	137833731	137833732	chunk0159_88_1	6.70128	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	137833688	137833905	-43704354	-	MamSINE1	SINE	tRNA-RTE	-2	288	68	3
chr5	137900183	137900184	chunk0159_92_1	42.8876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	137899802	137900856	-43637403	+	Tigger2	DNA	TcMar-Tigger	1	959	-1759	3
chr5	138036394	138036395	chunk0159_94_1	13.0642	AR_DHT_Control	chr5	138036321	138036620	-43501639	-	LTR78	LTR	ERV1	-768	536	195	3
chr5	138287824	138287825	chunk0159_98_1	6.88185	AR_DHT_Control	chr5	138287719	138288076	-43250183	+	L1ME4a	LINE	L1	5535	5920	-204	3
chr5	138548859	138548860	chunk0159_106_1	187.2709	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	138548803	138549375	-42988884	+	L1MC5	LINE	L1	8072	8675	-629	3
chr5	138660271	138660272	chunk0159_117_1	109.1824	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	138660037	138660294	-42877965	+	MIR	SINE	MIR	7	262	0	3
chr5	138801251	138801252	chunk0159_122_1	5.56779	AR_DHT_Control	chr5	138800848	138801544	-42736715	-	Tigger2b_Pri	DNA	TcMar-Tigger	-335	733	7	3
chr5	138958807	138958808	chunk0159_125_1	21.2205	AR_DHT_Control	chr5	138958794	138959166	-42579093	-	L1MC4	LINE	L1	-852	7190	6819	3
chr5	139064867	139064868	chunk0159_130_1	12.96392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	139064738	139064947	-42473312	+	MIRb	SINE	MIR	21	251	-17	3
chr5	139137415	139137416	chunk0159_136_1	5.33725	AR_DHT_Control	chr5	139137183	139137419	-42400840	-	MIR	SINE	MIR	0	262	3	3
chr5	139168425	139168426	chunk0159_144_1	21.88087	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	139168270	139168695	-42369564	+	L1M4c	LINE	L1	113	561	-5823	3
chr5	139178696	139178697	chunk0159_145_1	8.53577	AR_DHT_Control	chr5	139178387	139178892	-42359367	+	L2c	LINE	L2	2843	3387	0	3
chr5	139226307	139226308	chunk0159_146_1	69.6397	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	139225921	139226404	-42311855	-	MER50	LTR	ERV1	-256	478	1	3
chr5	139397983	139397984	chunk0159_158_1	4.30284	AR_DHT_Control	chr5	139397850	139398044	-42140215	+	L2a	LINE	L2	3213	3425	-1	3
chr5	139452405	139452406	chunk0159_161_1	5.69226	AR_DHT_Control	chr5	139451599	139452652	-42085607	+	(TG)n	Simple_repeat	Simple_repeat	1	1077	0	3
chr5	139575017	139575018	chunk0159_164_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	139574933	139575087	-41963172	+	L1ME2	LINE	L1	5685	5837	-327	3
chr5	140126895	140126896	chunk0159_178_1	23.677	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	140126764	140126928	-41411331	+	AmnSINE1	SINE	5S-Deu-L2	1	179	-396	3
chr5	140340857	140340858	chunk0159_197_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	140340805	140341055	-41197204	+	MIRc	SINE	MIR	2	246	-16	3
chr5	140619159	140619160	chunk0159_209_1	21.03304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	140618724	140619241	-40919018	+	L1MC1	LINE	L1	4899	5406	-927	3
chr5	140640858	140640859	chunk0159_210_1	9.25272	AR_DHT_Control	chr5	140640712	140640871	-40897388	+	L2b	LINE	L2	3222	3387	0	3
chr5	140813323	140813324	chunk0159_220_1	41.46849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	140813261	140813713	-40724546	-	Tigger3b	DNA	TcMar-Tigger	-22	1209	771	3
chr5	141791658	141791659	chunk0159_238_1	21.5348	AR_DHT_Control	chr5	141791481	141792296	-39745963	-	L2a	LINE	L2	-24	3402	2546	3
chr5	141904577	141904578	chunk0159_247_1	12.5159	AR_DHT_Control	chr5	141904544	141904703	-39633556	+	L2c	LINE	L2	3003	3174	-213	3
chr5	142058275	142058276	chunk0159_256_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	142057992	142058530	-39479729	-	L1ME2	LINE	L1	-7	6157	5634	3
chr5	142221469	142221470	chunk0159_263_1	17.62883	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	142221393	142221944	-39316315	-	L2a	LINE	L2	-1	3425	2796	3
chr5	142291230	142291231	chunk0159_267_1	28.80165	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	142291227	142291330	-39246929	-	L2c	LINE	L2	-2	3373	3246	3
chr5	142342215	142342216	chunk0159_270_1	70.3424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	142342163	142342351	-39195908	-	MIR	SINE	MIR	-3	259	73	3
chr5	142370759	142370760	chunk0159_273_1	17.73977	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	142370565	142370790	-39167469	+	MIR	SINE	MIR	13	241	-21	3
chr5	142443963	142443964	chunk0159_276_1	11.9014	AR_DHT_Control	chr5	142443902	142444028	-39094231	+	MIR	SINE	MIR	30	156	-106	3
chr5	142451396	142451397	chunk0159_277_1	104.5012	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	142450258	142451409	-39086850	-	L1MEc	LINE	L1	-4509	2593	1329	3
chr5	142711509	142711510	chunk0159_286_1	13.0642	AR_DHT_Control	chr5	142711434	142712148	-38826111	+	LTR66	LTR	ERVL	1	608	-2	3
chr5	142937676	142937677	chunk0159_300_1	71.38849	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	142936146	142938264	-38599995	+	L1MD2	LINE	L1	4248	6346	-13	3
chr5	142975997	142975998	chunk0159_303_1	7.20445	AR_DHT_Control	chr5	142975899	142976129	-38562130	+	MamRep137	DNA	TcMar-Tigger	273	495	-15	3
chr5	143063331	143063332	chunk0159_306_1	10.1301	AR_DHT_Control	chr5	143063150	143063505	-38474754	+	L2b	LINE	L2	2564	2911	-508	3
chr5	143151388	143151389	chunk0159_313_1	27.0313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	143150696	143151673	-38386586	+	L1MC2	LINE	L1	4915	5892	-452	3
chr5	143418149	143418150	chunk0159_317_1	7.5528	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	143418035	143418151	-38120108	-	MIR1_Amn	SINE	MIR	-97	133	16	3
chr5	143425772	143425773	chunk0159_319_1	22.9599	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	143424924	143426396	-38111863	+	L1MB7	LINE	L1	4668	6166	-18	3
chr5	143602121	143602122	chunk0159_327_1	12.62277	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	143602112	143602213	-37936046	+	MIR	SINE	MIR	118	228	-40	3
chr5	143674095	143674096	chunk0159_330_1	11.43523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	143673822	143674136	-37864123	+	L2a	LINE	L2	3084	3426	0	3
chr5	143898511	143898512	chunk0159_336_1	5.36932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	143898498	143898551	-37639708	-	L2a	LINE	L2	-1	3425	3370	3
chr5	143931609	143931610	chunk0159_337_1	7.37742	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	143931209	143933496	-37604763	+	L1MA2	LINE	L1	14	2401	-5164	3
chr5	144114746	144114747	chunk0159_339_1	11.582	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	144113897	144116118	-37422141	+	L1MB7	LINE	L1	3956	6184	0	3
chr5	144187975	144187976	chunk0159_345_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	144187864	144188200	-37350059	+	AmnSINE1	SINE	5S-Deu-L2	1	374	-201	3
chr5	144377318	144377319	chunk0159_351_1	14.99993	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	144377274	144377549	-37160710	-	MER102c	DNA	hAT-Charlie	-43	288	5	3
chr5	144482037	144482038	chunk0159_354_1	19.89025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	144481862	144482106	-37056153	-	MIRb	SINE	MIR	-4	258	15	3
chr5	145815247	145815248	chunk0159_362_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	145815007	145815349	-35722910	+	MLT1A	LTR	ERVL-MaLR	25	374	0	3
chr5	145984144	145984145	chunk0159_374_1	16.71124	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	145984110	145984198	-35554061	+	L2a	LINE	L2	3278	3387	0	3
chr5	146009080	146009081	chunk0159_376_1	9.70251	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	146008637	146009210	-35529049	-	L1ME1	LINE	L1	-29	6150	5575	3
chr5	146210067	146210068	chunk0159_380_1	36.7388	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	146210042	146210216	-35328043	+	L2c	LINE	L2	3205	3386	-1	3
chr5	146433785	146433786	chunk0159_384_1	5.29288	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	146433760	146433790	-35104469	+	U2	snRNA	snRNA	4	33	-155	3
chr5	147032086	147032087	chunk0159_392_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	147031693	147032373	-34505886	+	L1PB	LINE	L1	4788	5468	-683	3
chr5	147053256	147053257	chunk0159_393_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	147053214	147053309	-34484950	+	(AACAA)n	Simple_repeat	Simple_repeat	1	96	0	3
chr5	147571631	147571632	chunk0159_403_1	22.7139	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	147571285	147571714	-33966545	-	L1MD2	LINE	L1	-863	5283	4843	3
chr5	147589995	147589996	chunk0159_405_1	15.95794	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	147589936	147590125	-33948134	-	MIR	SINE	MIR	-23	207	8	3
chr5	147756955	147756956	chunk0159_408_1	9.25776	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	147756931	147756958	-33781301	+	L2c	LINE	L2	3349	3375	-12	3
chr5	147905266	147905267	chunk0159_413_1	8.46955	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	147905236	147905439	-33632820	-	MIRc	SINE	MIR	-14	254	6	3
chr5	147994881	147994882	chunk0159_419_1	7.51711	AR_DHT_Control	chr5	147994643	147995291	-33542968	-	L1MA10	LINE	L1	-247	5932	5271	3
chr5	147998571	147998572	chunk0159_420_1	7.83165	AR_DHT_Control	chr5	147998459	147998656	-33539603	-	MIR	SINE	MIR	-4	258	2	3
chr5	148098181	148098182	chunk0159_423_1	30.5308	AR_DHT_Control	chr5	148098000	148098202	-33440057	-	MIR3	SINE	MIR	-5	203	2	3
chr5	148107777	148107778	chunk0159_426_1	12.7752	AR_DHT_Control	chr5	148107530	148107988	-33430271	+	MamTip3	DNA	hAT-Tip100	12	499	-1	3
chr5	148193917	148193918	chunk0159_432_1	8.02791	AR_DHT_Control	chr5	148193742	148193958	-33344301	+	L2c	LINE	L2	3098	3309	-78	3
chr5	148379579	148379580	chunk0159_435_1	50.9194	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	148379530	148379603	-33158656	-	MIRb	SINE	MIR	-2	266	195	3
chr5	148465148	148465149	chunk0159_445_1	17.2862	AR_DHT_Control	chr5	148463516	148465414	-33072845	+	L1MC1	LINE	L1	4606	6508	0	3
chr5	148776154	148776155	chunk0159_446_1	4.86605	AR_DHT_Control	chr5	148776059	148776206	-32762053	-	L2c	LINE	L2	-13	3374	3223	3
chr5	148813717	148813718	chunk0159_448_1	72.7427	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	148812842	148813929	-32724330	-	Tigger3	DNA	TcMar-Tigger	-1896	1133	98	3
chr5	148841789	148841790	chunk0159_452_1	309.8755	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr5	148841585	148841829	-32696430	-	MER103C	DNA	hAT-Charlie	-77	220	1	3
chr5	148906888	148906889	chunk0159_459_1	10.1384	AR_DHT_Control	chr5	148906752	148907098	-32631161	-	L2a	LINE	L2	0	3426	3069	3
chr5	148909257	148909258	chunk0159_460_1	6.98158	AR_DHT_Control	chr5	148909115	148909689	-32628570	+	L1ME1	LINE	L1	5579	6176	-3	3
chr5	148979160	148979161	chunk0160_10_1	16.3575	AR_DHT_Control	chr5	148979020	148979175	-32559084	-	L2c	LINE	L2	-228	3159	3002	3
chr5	149017227	149017228	chunk0160_14_1	50.72935	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	149017069	149017238	-32521021	+	L2a	LINE	L2	3227	3418	-8	3
chr5	149048692	149048693	chunk0160_19_1	29.0375	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149048579	149048859	-32489400	-	L2a	LINE	L2	-3	3423	3136	3
chr5	149221042	149221043	chunk0160_28_1	85.7976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	149220825	149221262	-32316997	-	L2b	LINE	L2	-1	3374	2963	3
chr5	149572296	149572297	chunk0160_45_1	10.5201	AR_DHT_Control	chr5	149572263	149572557	-31965702	+	ERVL-B4-int	LTR	ERVL	5411	5714	0	3
chr5	149614223	149614224	chunk0160_52_1	63.9334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149614062	149614420	-31923839	-	L1ME3G	LINE	L1	-359	565	202	3
chr5	149742637	149742638	chunk0160_60_1	12.6489	AR_DHT_Control	chr5	149742595	149742813	-31795446	-	MIRb	SINE	MIR	-1	267	26	3
chr5	149760118	149760119	chunk0160_61_1	84.60608	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	149760110	149760180	-31778079	-	L2b	LINE	L2	-18	3357	3285	3
chr5	149785445	149785446	chunk0160_64_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149785280	149785468	-31752791	+	MIRb	SINE	MIR	29	257	-11	3
chr5	149870481	149870482	chunk0160_72_1	5.62266	AR_DHT_Control	chr5	149870296	149870572	-31667687	-	Helitron1Na_Mam	RC	Helitron	-728	334	1	3
chr5	149878655	149878656	chunk0160_73_1	21.1287	AR_DHT_Control	chr5	149878347	149879034	-31659225	-	L1ME4b	LINE	L1	-320	572	1	3
chr5	149911256	149911257	chunk0160_76_1	12.4453	AR_DHT_Control	chr5	149911179	149911504	-31626755	+	LTR54	LTR	ERV1	200	509	-1	3
chr5	149953416	149953417	chunk0160_82_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149953253	149953428	-31584831	-	L1M5	LINE	L1	-274	5850	5655	3
chr5	149996669	149996670	chunk0160_84_1	262.7263	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	149996611	149996749	-31541510	+	MIRc	SINE	MIR	89	249	-19	3
chr5	150038046	150038047	chunk0160_87_1	86.7657	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	150037727	150038130	-31500129	-	L1ME4a	LINE	L1	-18	6106	5624	3
chr5	150038926	150038927	chunk0160_89_1	27.3225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	150038459	150039140	-31499119	-	L1ME1	LINE	L1	-41	6138	5450	3
chr5	150092209	150092210	chunk0160_91_1	5.55081	AR_DHT_Control	chr5	150092040	150092253	-31446006	-	MER58A	DNA	hAT-Charlie	-11	213	1	3
chr5	150137323	150137324	chunk0160_92_1	3.39965	AR_DHT_Control	chr5	150137246	150137416	-31400843	+	MIR3	SINE	MIR	29	195	-13	3
chr5	150263431	150263432	chunk0160_94_1	5.40372	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	150263331	150263682	-31274577	+	(AC)n	Simple_repeat	Simple_repeat	1	354	0	3
chr5	150436708	150436709	chunk0160_99_1	7.36432	AR_DHT_Control	chr5	150436639	150436712	-31101547	-	L2a	LINE	L2	-13	3413	3329	3
chr5	150485085	150485086	chunk0160_100_1	7.38866	AR_DHT_Control	chr5	150485005	150485174	-31053085	+	MIRc	SINE	MIR	18	191	-71	3
chr5	150510684	150510685	chunk0160_104_1	5.16739	AR_DHT_Control	chr5	150510587	150510700	-31027559	-	MamRep434	DNA	TcMar-Tigger	-311	115	5	3
chr5	150801457	150801458	chunk0160_111_1	4.83532	AR_DHT_Control	chr5	150801423	150801612	-30736647	+	MER5A	DNA	hAT-Charlie	1	187	-2	3
chr5	150815559	150815560	chunk0160_112_1	6.48643	AR_DHT_Control	chr5	150815480	150815900	-30722359	+	L1M4	LINE	L1	3998	4383	-1763	3
chr5	150826930	150826931	chunk0160_113_1	6.48643	AR_DHT_Control	chr5	150826705	150827421	-30710838	+	L1MA8	LINE	L1	5570	6289	-2	3
chr5	150837563	150837564	chunk0160_115_1	40.2178	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	150837273	150837862	-30700397	-	LTR10C	LTR	ERV1	0	591	1	3
chr5	150910614	150910615	chunk0160_121_1	14.1213	AR_DHT_Control	chr5	150910560	150910791	-30627468	+	L1MEc	LINE	L1	4221	4444	-1875	3
chr5	151015089	151015090	chunk0160_126_1	70.5774	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	151014807	151015352	-30522907	+	MER68	LTR	ERVL	1	561	-2	3
chr5	151282597	151282598	chunk0160_131_1	107.92442	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	151282475	151282871	-30255388	-	L1ME3G	LINE	L1	-310	614	153	3
chr5	151363281	151363282	chunk0160_138_1	12.99033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	151362690	151363334	-30174925	-	L1M3f	LINE	L1	-4183	2382	1703	3
chr5	151493353	151493354	chunk0160_151_1	6.31759	AR_DHT_Control	chr5	151493193	151493578	-30044681	-	MER21B	LTR	ERVL	-15	923	455	3
chr5	151610458	151610459	chunk0160_152_1	7.87199	AR_DHT_Control	chr5	151610452	151610819	-29927440	-	Charlie5	DNA	hAT-Charlie	0	2624	2259	3
chr5	151709559	151709560	chunk0160_155_1	8.21385	AR_DHT_Control	chr5	151709032	151709668	-29828591	+	LTR9D	LTR	ERV1	1	645	0	3
chr5	151779897	151779898	chunk0160_158_1	33.12187	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	151779795	151780319	-29757940	-	L1ME3Cz	LINE	L1	-447	550	10	3
chr5	151848189	151848190	chunk0160_161_1	35.2184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	151848062	151848359	-29689900	+	MER68B	LTR	ERVL	1	303	-261	3
chr5	152218696	152218697	chunk0160_164_1	6.37684	AR_DHT_Control	chr5	152218297	152218769	-29319490	-	MLT1C	LTR	ERVL-MaLR	-1	466	1	3
chr5	152526176	152526177	chunk0160_167_1	8.27376	AR_DHT_Control	chr5	152525608	152526183	-29012076	-	L1MEd	LINE	L1	-5183	1920	1216	3
chr5	153467314	153467315	chunk0160_170_1	30.7779	AR_DHT_Control	chr5	153466827	153468930	-28069329	+	L2a	LINE	L2	1065	3426	0	3
chr5	153571355	153571356	chunk0160_173_1	62.8518	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	153571326	153571631	-27966628	-	MER58B	DNA	hAT-Charlie	0	341	1	3
chr5	153613977	153613978	chunk0160_176_1	8.62865	AR_DHT_Control	chr5	153613932	153614329	-27923930	+	L2a	LINE	L2	2932	3382	-44	3
chr5	153952782	153952783	chunk0160_177_1	5.6425	AR_DHT_Control	chr5	153952674	153952871	-27585388	-	MIRb	SINE	MIR	-6	262	36	3
chr5	154008978	154008979	chunk0160_178_1	6.09694	AR_DHT_Control	chr5	154008815	154010318	-27527941	+	L1MC4	LINE	L1	6443	8042	0	3
chr5	154159981	154159982	chunk0160_183_1	11.9084	AR_DHT_Control	chr5	154159846	154160471	-27377788	-	L1ME3G	LINE	L1	-10	914	160	3
chr5	154504409	154504410	chunk0160_189_1	13.64524	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	154504398	154504597	-27033662	+	L1ME3G	LINE	L1	601	804	-120	3
chr5	154593369	154593370	chunk0160_190_1	14.70235	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	154593350	154593506	-26944753	-	L1M4	LINE	L1	-1654	4492	4316	3
chr5	154660290	154660291	chunk0160_193_1	46.49419	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	154660188	154660351	-26877908	+	MIRb	SINE	MIR	26	204	-64	3
chr5	154686444	154686445	chunk0160_196_1	11.53566	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	154686293	154686474	-26851785	-	L2b	LINE	L2	-222	3153	2963	3
chr5	154724233	154724234	chunk0160_201_1	12.4942	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	154724199	154724339	-26813920	-	MIR	SINE	MIR	-7	261	116	3
chr5	154727235	154727236	chunk0160_203_1	27.7003	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	154727060	154727435	-26810824	+	L1MEg	LINE	L1	918	1354	-4730	3
chr5	154834274	154834275	chunk0160_208_1	180.8829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	154834223	154834330	-26703929	-	L2a	LINE	L2	-10	3416	3313	3
chr5	154923531	154923532	chunk0160_218_1	99.9921	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	154923445	154923704	-26614555	-	MER58B	DNA	hAT-Charlie	0	341	57	3
chr5	155028273	155028274	chunk0160_221_1	57.2784	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	155027585	155029588	-26508671	+	L1M1	LINE	L1	1240	3316	-4249	3
chr5	155129218	155129219	chunk0160_225_1	79.6244	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	155129169	155129423	-26408836	-	MIRb	SINE	MIR	-6	262	3	3
chr5	155546360	155546361	chunk0160_229_1	26.0042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	155546034	155546469	-25991790	+	MER54A	LTR	ERVL	457	901	0	3
chr5	155618408	155618409	chunk0160_231_1	6.98682	AR_DHT_Control	chr5	155618274	155618448	-25919811	-	MIR	SINE	MIR	-10	252	54	3
chr5	155626349	155626350	chunk0160_233_1	215.2423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	155626042	155626370	-25911889	-	MER102c	DNA	hAT-Charlie	-59	272	1	3
chr5	155651970	155651971	chunk0160_235_1	29.6631	AR_DHT_Control	chr5	155650826	155652157	-25886102	+	L1MB8	LINE	L1	4788	6169	-9	3
chr5	155678582	155678583	chunk0160_236_1	27.0662	AR_DHT_Control	chr5	155678291	155678898	-25859361	+	HUERS-P2-int	LTR	ERV1	769	1380	-1708	3
chr5	155984104	155984105	chunk0160_240_1	19.00932	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	155984089	155984195	-25554064	-	MIRc	SINE	MIR	-1	267	152	3
chr5	156616771	156616772	chunk0160_247_1	8.75738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	156616572	156616775	-24921484	+	L2a	LINE	L2	2993	3204	-222	3
chr5	156778196	156778197	chunk0160_253_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	156778164	156778316	-24759943	-	MIRc	SINE	MIR	-48	220	55	3
chr5	156883102	156883103	chunk0160_257_1	5.00158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	156882931	156883345	-24654914	+	MLT1K	LTR	ERVL-MaLR	162	585	-10	3
chr5	157019596	157019597	chunk0160_262_1	14.0944	AR_DHT_Control	chr5	157018061	157020331	-24517928	+	L1MC1	LINE	L1	4006	6327	-6	3
chr5	157024358	157024359	chunk0160_264_1	8.95279	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	157024358	157024451	-24513808	+	MER5A	DNA	hAT-Charlie	69	164	-25	3
chr5	157129519	157129520	chunk0160_265_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	157129516	157129690	-24408569	-	AluSp	SINE	Alu	-20	293	120	3
chr5	157278593	157278594	chunk0160_267_1	60.21433	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	157278443	157278642	-24259617	+	MIRc	SINE	MIR	8	218	-50	3
chr5	157795565	157795566	chunk0160_280_1	26.9642	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	157795346	157795633	-23742626	+	L1MC4	LINE	L1	7629	7923	-119	3
chr5	157877770	157877771	chunk0160_282_1	9.21264	AR_DHT_Control	chr5	157877658	157877815	-23660444	-	L1MB7	LINE	L1	-409	5755	5603	3
chr5	157999681	157999682	chunk0160_286_1	23.77998	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	157999164	157999719	-23538540	-	L1MC4	LINE	L1	-124	7918	7349	3
chr5	158023495	158023496	chunk0160_289_1	5.28628	AR_DHT_Control	chr5	158023400	158023673	-23514586	-	L2b	LINE	L2	-10	3365	3052	3
chr5	158225815	158225816	chunk0160_292_1	5.6425	AR_DHT_Control	chr5	158225583	158225872	-23312387	+	L2a	LINE	L2	3166	3423	-3	3
chr5	158331813	158331814	chunk0160_295_1	8.27376	AR_DHT_Control	chr5	158331386	158334160	-23204099	-	L1PA15	LINE	L1	0	6785	3955	3
chr5	158386181	158386182	chunk0160_296_1	12.5821	AR_DHT_Control	chr5	158386038	158386187	-23152072	-	L1ME4a	LINE	L1	-240	5884	5728	3
chr5	158595096	158595097	chunk0160_298_1	68.1189	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	158595021	158595277	-22942982	+	MIR	SINE	MIR	1	252	-10	3
chr5	158694475	158694476	chunk0160_300_1	8.02791	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	158694294	158694752	-22843507	+	L2c	LINE	L2	2935	3387	0	3
chr5	159189338	159189339	chunk0160_315_1	13.3217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	159189189	159190041	-22348218	+	L1MB7	LINE	L1	5224	6123	-61	3
chr5	159197640	159197641	chunk0160_316_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	159197463	159197807	-22340452	-	Charlie20a	DNA	hAT-Charlie	-44	763	412	3
chr5	159377766	159377767	chunk0160_319_1	13.81313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	159375660	159379760	-22158499	+	L1PB2	LINE	L1	56	3366	-3549	3
chr5	159482051	159482052	chunk0160_324_1	14.2024	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	159482023	159482059	-22056200	+	(TTAT)n	Simple_repeat	Simple_repeat	1	36	0	3
chr5	160040038	160040039	chunk0160_340_1	10.9705	AR_DHT_Control	chr5	160039947	160040595	-21497664	-	Tigger3b	DNA	TcMar-Tigger	0	1231	617	3
chr5	160049181	160049182	chunk0160_342_1	53.0288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	160049068	160049378	-21488881	+	MER58B	DNA	hAT-Charlie	9	333	-8	3
chr5	160161897	160161898	chunk0160_349_1	30.5121	AR_DHT_Control	chr5	160161844	160162003	-21376256	-	L1M1	LINE	L1	-551	5749	5588	3
chr5	160287094	160287095	chunk0160_352_1	11.967	AR_DHT_Control	chr5	160287063	160287169	-21251090	+	MIRb	SINE	MIR	32	154	-114	3
chr5	160343235	160343236	chunk0160_354_1	6.10159	AR_DHT_Control	chr5	160343026	160343275	-21194984	+	MIR	SINE	MIR	12	262	0	3
chr5	160870273	160870274	chunk0160_359_1	35.90844	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	160869531	160870466	-20667793	+	L1MC1	LINE	L1	2	870	-5638	3
chr5	161172458	161172459	chunk0160_367_1	163.31407	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	161171921	161172820	-20365439	-	L1MC1	LINE	L1	-226	6107	5182	3
chr5	161190537	161190538	chunk0160_370_1	21.16767	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	161190443	161190579	-20347680	+	L2c	LINE	L2	3246	3386	-1	3
chr5	161193285	161193286	chunk0160_373_1	264.2896	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	161193135	161193312	-20344947	-	MLT2B4	LTR	ERVL	-211	345	183	3
chr5	161207822	161207823	chunk0160_374_1	43.2007	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	161207314	161208370	-20329889	+	L1PA15	LINE	L1	4800	5882	-283	3
chr5	161309157	161309158	chunk0160_381_1	8.0668	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	161308371	161309632	-20228627	+	L1PA13	LINE	L1	4509	5767	-396	3
chr5	161312798	161312799	chunk0160_382_1	8.9624	AR_DHT_Control	chr5	161312690	161312832	-20225427	-	MER5A	DNA	hAT-Charlie	-9	180	21	3
chr5	161337645	161337646	chunk0160_384_1	53.6359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	161337501	161337673	-20200586	-	L2c	LINE	L2	-1	3386	3234	3
chr5	163427176	163427177	chunk0160_393_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	163425954	163428316	-18109943	+	L1PB1	LINE	L1	3821	6150	-1	3
chr5	163521279	163521280	chunk0160_401_1	131.1244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	163521265	163521374	-18016885	-	L1MC4	LINE	L1	-1262	6620	6500	3
chr5	163527353	163527354	chunk0160_402_1	16.7683	AR_DHT_Control	chr5	163527098	163527623	-18010636	-	HAL1	LINE	L1	-687	1820	1207	3
chr5	163846814	163846815	chunk0160_409_1	7.36432	AR_DHT_Control	chr5	163846435	163847100	-17691159	-	L1ME4b	LINE	L1	-346	5818	5324	3
chr5	164053289	164053290	chunk0160_413_1	9.01771	AR_DHT_Control	chr5	164053287	164053391	-17484868	-	L2a	LINE	L2	-4	3422	3311	3
chr5	164173041	164173042	chunk0160_417_1	11.2177	AR_DHT_Control	chr5	164172638	164173118	-17365141	+	L2a	LINE	L2	2952	3426	0	3
chr5	164238960	164238961	chunk0160_421_1	13.0599	AR_DHT_Control	chr5	164238299	164239431	-17298828	+	L1MB7	LINE	L1	181	1307	-6210	3
chr5	164501623	164501624	chunk0160_429_1	29.7314	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	164501591	164501624	-17036635	+	L2a	LINE	L2	3392	3424	-2	3
chr5	164610547	164610548	chunk0160_436_1	103.40497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	164610509	164610665	-16927594	+	L2b	LINE	L2	3210	3375	0	3
chr5	164873525	164873526	chunk0160_445_1	16.9017	AR_DHT_Control	chr5	164871914	164873763	-16664496	+	L1MC1	LINE	L1	3975	5855	-478	3
chr5	164973223	164973224	chunk0160_446_1	14.523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	164969249	164973617	-16564642	-	LTR25-int	LTR	ERV1	-137	7051	609	3
chr5	164987469	164987470	chunk0160_447_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	164986904	164987631	-16550628	+	LTR1F2	LTR	ERV1	1	739	0	3
chr5	165051411	165051412	chunk0160_450_1	7.67158	AR_DHT_Control	chr5	165051137	165051713	-16486546	-	L1MC3	LINE	L1	-1881	6699	6080	3
chr5	165057335	165057336	chunk0160_451_1	15.311	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	165057276	165057482	-16480777	-	MIR	SINE	MIR	-24	238	4	3
chr5	165109013	165109014	chunk0160_454_1	97.1545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	165109007	165109045	-16429214	+	(TTTTGG)n	Simple_repeat	Simple_repeat	1	38	0	3
chr5	165126167	165126168	chunk0160_457_1	68.6316	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165126037	165126261	-16411998	-	L2c	LINE	L2	-218	3208	2985	3
chr5	165202055	165202056	chunk0160_462_1	18.80819	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165202036	165202369	-16335890	-	L3b	LINE	CR1	-731	3368	3148	3
chr5	165251139	165251140	chunk0161_1_1	20.0911	AR_DHT_Control	chr5	165251091	165251336	-16286923	-	L2c	LINE	L2	0	3387	3113	3
chr5	165327775	165327776	chunk0161_4_1	133.6779	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	165327763	165328180	-16210079	-	L3	LINE	CR1	-16	4083	3651	3
chr5	165348473	165348474	chunk0161_7_1	18.88255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	165348243	165348565	-16189694	+	L2c	LINE	L2	3042	3381	-6	3
chr5	165754079	165754080	chunk0161_21_1	17.5189	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165754043	165754157	-15784102	-	MIRc	SINE	MIR	-10	258	142	3
chr5	165801507	165801508	chunk0161_30_1	7.42871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165801290	165802536	-15735723	+	L1MB3	LINE	L1	5125	6411	-8	3
chr5	165801806	165801807	chunk0161_31_1	7.80475	AR_DHT_Control	chr5	165801290	165802536	-15735723	+	L1MB3	LINE	L1	5125	6411	-8	3
chr5	165828830	165828831	chunk0161_36_1	13.2304	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	165828043	165829478	-15708781	-	L1MEf	LINE	L1	-2839	3480	1943	3
chr5	165831304	165831305	chunk0161_37_1	5.69226	AR_DHT_Control	chr5	165829792	165831377	-15706882	-	L1MEf	LINE	L1	-4473	1942	285	3
chr5	165876769	165876770	chunk0161_39_1	49.9887	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	165876565	165877986	-15660273	-	L2a	LINE	L2	-15	3411	1932	3
chr5	165920572	165920573	chunk0161_43_1	25.0939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	165920373	165920828	-15617431	-	L1M7	LINE	L1	-4780	1531	1018	3
chr5	166075116	166075117	chunk0161_52_1	11.6878	AR_DHT_Control	chr5	166075011	166075544	-15462715	-	LTR85c	LTR	Gypsy?	-166	657	98	3
chr5	166281066	166281067	chunk0161_58_1	105.3285	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	166280889	166281155	-15257104	+	MLT1F2	LTR	ERVL-MaLR	23	323	-237	3
chr5	166379034	166379035	chunk0161_61_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	166378556	166380010	-15158249	-	MER52A	LTR	ERV1	-150	1605	1	3
chr5	166416739	166416740	chunk0161_63_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	166416043	166416960	-15121299	-	L1MEf	LINE	L1	-4782	2255	1128	3
chr5	166568030	166568031	chunk0161_66_1	21.24671	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	166567298	166568527	-14969732	+	L1M5	LINE	L1	2155	3430	-2716	3
chr5	166595841	166595842	chunk0161_68_1	11.6878	AR_DHT_Control	chr5	166595679	166595886	-14942373	+	L2b	LINE	L2	3148	3375	0	3
chr5	166710434	166710435	chunk0161_71_1	4.88663	AR_DHT_Control	chr5	166710199	166710482	-14827777	-	MLT1L	LTR	ERVL-MaLR	-295	315	23	3
chr5	167128822	167128823	chunk0161_83_1	6.93299	AR_DHT_Control	chr5	167128698	167128829	-14409430	+	L2c	LINE	L2	3202	3332	-55	3
chr5	167229633	167229634	chunk0161_88_1	6.7814	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	167228999	167230538	-14307721	-	L1MA4A	LINE	L1	-5234	2332	718	3
chr5	167365746	167365747	chunk0161_97_1	8.09329	AR_DHT_Control	chr5	167365699	167365897	-14172362	+	L1M5	LINE	L1	2404	2610	-3536	3
chr5	167478269	167478270	chunk0161_108_1	38.77628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	167478191	167478271	-14059988	-	Tigger19b	DNA	TcMar-Tigger	-154	396	307	3
chr5	167543953	167543954	chunk0161_111_1	34.72395	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	167543576	167544063	-13994196	-	MLT1C	LTR	ERVL-MaLR	-2	465	1	3
chr5	168076688	168076689	chunk0161_125_1	16.1812	AR_DHT_Control	chr5	168076568	168076699	-13461560	+	L2a	LINE	L2	3291	3426	0	3
chr5	168283279	168283280	chunk0161_129_1	175.6859	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	168283239	168283411	-13254848	-	MER103C	DNA	hAT-Charlie	-43	254	83	3
chr5	168348142	168348143	chunk0161_131_1	7.92132	AR_DHT_Control	chr5	168348027	168348246	-13190013	-	MIRb	SINE	MIR	-1	267	38	3
chr5	168362231	168362232	chunk0161_134_1	104.3877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	168362209	168362325	-13175934	+	MIR	SINE	MIR	151	262	0	3
chr5	168595931	168595932	chunk0161_144_1	18.4345	AR_DHT_Control	chr5	168592555	168597020	-12941239	-	L1PA5	LINE	L1	-8	6319	1871	3
chr5	169032816	169032817	chunk0161_158_1	6.53862	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	169032808	169032922	-12505337	-	L1MA9	LINE	L1	-38	6274	6156	3
chr5	169328335	169328336	chunk0161_171_1	25.3902	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	169328137	169328871	-12209388	+	L1ME1	LINE	L1	5434	6179	0	3
chr5	169634143	169634144	chunk0161_177_1	76.7011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	169633801	169634210	-11904049	+	MSTD	LTR	ERVL-MaLR	3	393	-3	3
chr5	169833829	169833830	chunk0161_181_1	12.2633	AR_DHT_Control	chr5	169833613	169833957	-11704302	+	HAL1	LINE	L1	441	792	-1715	3
chr5	169864669	169864670	chunk0161_185_1	49.91206	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	169864540	169864726	-11673533	+	MIRc	SINE	MIR	34	229	-39	3
chr5	169939595	169939596	chunk0161_187_1	16.2169	AR_DHT_Control	chr5	169939203	169939681	-11598578	-	Tigger3b	DNA	TcMar-Tigger	-642	589	74	3
chr5	170130903	170130904	chunk0161_188_1	35.2784	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	170130878	170131051	-11407208	+	L1ME1	LINE	L1	5862	6050	-129	3
chr5	170195506	170195507	chunk0161_190_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	170195491	170195537	-11342722	+	A-rich	Low_complexity	Low_complexity	1	46	0	3
chr5	170236605	170236606	chunk0161_191_1	27.7192	AR_DHT_Control	chr5	170236525	170236788	-11301471	+	L2c	LINE	L2	2834	3105	-282	3
chr5	170375983	170375984	chunk0161_198_1	12.3053	AR_DHT_Control	chr5	170375754	170375990	-11162269	-	MIR	SINE	MIR	-1	261	2	3
chr5	170821620	170821621	chunk0161_209_1	18.91251	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr5	170821380	170821625	-10716634	+	MIR	SINE	MIR	13	265	-3	3
chr5	170849542	170849543	chunk0161_213_1	16.5229	AR_DHT_Control	chr5	170849079	170849661	-10688598	+	L1MC5a	LINE	L1	1102	1678	-1099	3
chr5	170863201	170863202	chunk0161_215_1	66.9062	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	170863122	170863315	-10674944	-	L2c	LINE	L2	-263	3124	2929	3
chr5	170946884	170946885	chunk0161_223_1	168.5595	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	170946506	170947100	-10591159	-	Tigger17a	DNA	TcMar-Tigger	-6	648	2	3
chr5	171025222	171025223	chunk0161_224_1	7.03714	AR_DHT_Control	chr5	171024597	171025566	-10512693	+	L2b	LINE	L2	2072	3192	-183	3
chr5	171039904	171039905	chunk0161_225_1	27.4069	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	171039616	171040303	-10497956	+	L1P4	LINE	L1	3230	3927	-2219	3
chr5	171070971	171070972	chunk0161_227_1	86.937	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	171070864	171071254	-10467005	-	L1ME4b	LINE	L1	-332	560	140	3
chr5	171188201	171188202	chunk0161_231_1	7.09019	AR_DHT_Control	chr5	171188078	171188239	-10350020	+	L3	LINE	CR1	3635	3790	-309	3
chr5	171236886	171236887	chunk0161_233_1	15.00868	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	171236678	171236908	-10301351	-	MIR	SINE	MIR	-11	251	1	3
chr5	171475866	171475867	chunk0161_238_1	37.2657	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	171475831	171475958	-10062301	+	MLT1K	LTR	ERVL-MaLR	427	560	-35	3
chr5	171509802	171509803	chunk0161_239_1	6.44773	AR_DHT_Control	chr5	171509545	171509879	-10028380	+	L2	LINE	L2	2357	2708	-711	3
chr5	171610859	171610860	chunk0161_242_1	62.98155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	171610683	171610904	-9927355	+	L2a	LINE	L2	3142	3415	-11	3
chr5	171661631	171661632	chunk0161_246_1	24.8991	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	171661572	171662164	-9876095	-	L1MC1	LINE	L1	-8	7777	7232	3
chr5	171783237	171783238	chunk0161_250_1	14.7022	AR_DHT_Control	chr5	171783061	171783959	-9754300	+	L1MD2	LINE	L1	4394	5396	-750	3
chr5	171884051	171884052	chunk0161_252_1	20.726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	171883540	171884922	-9653337	-	L1MC1	LINE	L1	-559	5592	4306	3
chr5	171940463	171940464	chunk0161_256_1	21.20454	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	171940124	171940607	-9597652	+	L1MC4a	LINE	L1	6418	6946	-1096	3
chr5	172484902	172484903	chunk0161_267_1	8.39265	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	172484501	172485254	-9053005	+	(GT)n	Simple_repeat	Simple_repeat	1	754	0	3
chr5	172560323	172560324	chunk0161_272_1	17.25481	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	172560174	172560595	-8977664	-	L1ME1	LINE	L1	-351	5828	5377	3
chr5	172565772	172565773	chunk0161_273_1	13.0568	AR_DHT_Control	chr5	172565568	172566013	-8972246	-	MLT1C	LTR	ERVL-MaLR	-6	461	1	3
chr5	172782761	172782762	chunk0161_279_1	8.27376	AR_DHT_Control	chr5	172782587	172783136	-8755123	+	L1MB7	LINE	L1	5522	6064	-120	3
chr5	172847163	172847164	chunk0161_282_1	7.02986	AR_DHT_Control	chr5	172846970	172847414	-8690845	-	MLT1J2	LTR	ERVL-MaLR	0	448	3	3
chr5	173094113	173094114	chunk0161_299_1	9.01771	AR_DHT_Control	chr5	173093816	173095183	-8443076	-	L1MA9	LINE	L1	-210	7521	6169	3
chr5	173364935	173364936	chunk0161_302_1	11.3519	AR_DHT_Control	chr5	173364901	173365121	-8173138	+	MER58A	DNA	hAT-Charlie	2	224	0	3
chr5	173409123	173409124	chunk0161_304_1	19.86379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	173408939	173409737	-8128522	-	L1ME4a	LINE	L1	-171	5953	5106	3
chr5	173454793	173454794	chunk0161_308_1	30.94522	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	173454482	173455036	-8083223	+	MLT1F1	LTR	ERVL-MaLR	27	569	0	3
chr5	173511285	173511286	chunk0161_317_1	28.76965	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	173509022	173511840	-8026419	-	L1ME3A	LINE	L1	-1038	5108	2110	3
chr5	173567768	173567769	chunk0161_320_1	34.1104	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	173567612	173567898	-7970361	-	MER20B	DNA	hAT-Charlie	-302	481	190	3
chr5	173789736	173789737	chunk0161_328_1	5.62266	AR_DHT_Control	chr5	173789604	173790042	-7748217	-	L2b	LINE	L2	-2	3373	2919	3
chr5	173810903	173810904	chunk0161_330_1	6.42872	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	173810547	173811575	-7726684	+	(TGGTGA)n	Simple_repeat	Simple_repeat	1	1042	0	3
chr5	173902955	173902956	chunk0161_333_1	5.60881	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	173902563	173903452	-7634807	-	L4_C_Mam	LINE	RTE-X	-193	4945	3944	3
chr5	173942225	173942226	chunk0161_337_1	31.20195	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	173941890	173942273	-7595986	+	L2c	LINE	L2	2924	3383	-4	3
chr5	174287128	174287129	chunk0161_345_1	8.45722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	174286925	174287245	-7251014	+	L1M8	LINE	L1	1952	2276	-79	3
chr5	174534396	174534397	chunk0161_350_1	4.70267	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	174534346	174534760	-7003499	+	LTR16C	LTR	ERVL	1	528	-10	3
chr5	174623904	174623905	chunk0161_351_1	8.11543	AR_DHT_Control	chr5	174623832	174624166	-6914093	-	L2a	LINE	L2	0	3426	3042	3
chr5	174694197	174694198	chunk0161_354_1	13.1721	AR_DHT_Control	chr5	174693883	174694332	-6843927	-	L2a	LINE	L2	-69	3357	2828	3
chr5	175107186	175107187	chunk0161_357_1	11.4177	AR_DHT_Control	chr5	175106435	175107543	-6430716	-	MER21-int	LTR	ERVL	-875	3316	2206	3
chr5	175446268	175446269	chunk0161_359_1	98.59235	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	175446242	175446537	-6091722	-	AluSx1	SINE	Alu	-18	294	1	3
chr5	175506551	175506552	chunk0161_361_1	10.1791	AR_DHT_Control	chr5	175506434	175506669	-6031590	+	L1ME4a	LINE	L1	5596	5832	-292	3
chr5	176143166	176143167	chunk0161_368_1	8.14314	AR_DHT_Control	chr5	176143000	176143413	-5394846	-	MER41C	LTR	ERV1	0	521	1	3
chr5	176144679	176144680	chunk0161_370_1	71.71359	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	176144671	176144764	-5393495	-	L4_A_Mam	LINE	RTE-X	-600	4390	4293	3
chr5	176338363	176338364	chunk0161_373_1	4.51655	AR_DHT_Control	chr5	176338010	176338733	-5199526	+	L1MC4	LINE	L1	7280	7905	-137	3
chr5	176695226	176695227	chunk0161_377_1	6.5005	AR_DHT_Control	chr5	176694965	176695400	-4842859	-	MLT1J	LTR	ERVL-MaLR	-10	502	1	3
chr5	176799737	176799738	chunk0161_380_1	12.78919	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	176799584	176799781	-4738478	+	(CA)n	Simple_repeat	Simple_repeat	1	198	0	3
chr5	177013967	177013968	chunk0161_394_1	6.48643	AR_DHT_Control	chr5	177013708	177014047	-4524212	-	MER68	LTR	ERVL	-77	486	132	3
chr5	177142474	177142475	chunk0161_395_1	5.41601	AR_DHT_Control	chr5	177142318	177142488	-4395771	-	L2c	LINE	L2	-56	3331	3140	3
chr5	177158036	177158037	chunk0161_396_1	7.36432	AR_DHT_Control	chr5	177157679	177158237	-4380022	-	L1MB7	LINE	L1	-93	6091	5528	3
chr5	177197707	177197708	chunk0161_398_1	12.1095	AR_DHT_Control	chr5	177197636	177197765	-4340494	-	MER44A	DNA	TcMar-Tigger	-179	160	1	3
chr5	177207985	177207986	chunk0161_399_1	4.06817	AR_DHT_Control	chr5	177207939	177208062	-4330197	-	AluJb	SINE	Alu	-179	133	2	3
chr5	177376353	177376354	chunk0161_403_1	21.6971	AR_DHT_Control	chr5	177376243	177376409	-4161850	+	L1ME3G	LINE	L1	512	690	-234	3
chr5	177382725	177382726	chunk0161_405_1	17.66909	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	177382399	177382743	-4155516	-	L2	LINE	L2	-607	2812	2466	3
chr5	177426652	177426653	chunk0161_406_1	4.87879	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	177426627	177426656	-4111603	+	G-rich	Low_complexity	Low_complexity	1	29	0	3
chr5	177455371	177455372	chunk0161_408_1	6.90279	AR_DHT_Control	chr5	177455322	177455452	-4082807	+	(GCGCAC)n	Simple_repeat	Simple_repeat	1	131	0	3
chr5	177599930	177599931	chunk0161_413_1	5.98896	AR_DHT_Control	chr5	177599871	177599951	-3938308	+	MIR3	SINE	MIR	30	128	-80	3
chr5	178070006	178070007	chunk0161_416_1	8.27376	AR_DHT_Control	chr5	178069997	178070131	-3468128	+	MIR3	SINE	MIR	1	150	-80	3
chr5	178379406	178379407	chunk0161_426_1	9.61425	AR_DHT_Control	chr5	178379334	178379565	-3158694	+	L1ME3G	LINE	L1	672	908	-16	3
chr5	178426832	178426833	chunk0161_428_1	21.35304	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	178426676	178426920	-3111339	+	L1MC1	LINE	L1	5200	5441	-892	3
chr5	178444940	178444941	chunk0161_430_1	23.7892	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	178444834	178445003	-3093256	+	MIR	SINE	MIR	96	262	0	3
chr5	178474725	178474726	chunk0161_434_1	87.6739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	178474656	178474839	-3063420	-	L2a	LINE	L2	-4	3422	3233	3
chr5	178567168	178567169	chunk0161_440_1	18.143	AR_DHT_Control	chr5	178566843	178567460	-2970799	+	L1MC4a	LINE	L1	6335	6936	-946	3
chr5	178676559	178676560	chunk0161_445_1	45.5976	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	178676477	178676917	-2861342	-	L1MD2	LINE	L1	-362	5997	5566	3
chr5	178710414	178710415	chunk0161_446_1	9.70003	AR_DHT_Control	chr5	178710199	178710584	-2827675	-	LTR57	LTR	ERVL	-7	404	1	3
chr5	178834253	178834254	chunk0161_451_1	12.7001	SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	178833566	178834302	-2703957	-	L1M4	LINE	L1	-2215	3931	3155	3
chr5	178893779	178893780	chunk0161_452_1	11.7658	AR_DHT_Control	chr5	178893619	178893946	-2644313	-	Tigger2	DNA	TcMar-Tigger	-1125	1593	1266	3
chr5	179306235	179306236	chunk0161_456_1	81.56721	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	179303293	179306586	-2231673	+	L1MEf	LINE	L1	21	4537	-2007	3
chr5	179519739	179519740	chunk0162_388_1	7.36432	AR_DHT_Control	chr5	179519668	179520224	-2018035	+	L1M4a2	LINE	L1	1267	1907	-1451	3
chr5	179596160	179596161	chunk0162_390_1	25.8846	AR_DHT_Control	chr5	179595849	179596449	-1941810	+	L1ME1	LINE	L1	5476	6106	-73	3
chr5	179684119	179684120	chunk0162_394_1	205.0902	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	179683834	179684228	-1854031	-	L1ME1	LINE	L1	-2133	5909	5491	3
chr5	179696824	179696825	chunk0162_396_1	60.1154	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	179696797	179697045	-1841214	+	Tigger1	DNA	TcMar-Tigger	8	284	-2134	3
chr5	179830332	179830333	chunk0162_407_1	13.8639	AR_DHT_Control	chr5	179830144	179830401	-1707858	+	HAL1	LINE	L1	1295	1576	-931	3
chr5	179896027	179896028	chunk0162_409_1	6.3364	AR_DHT_Control	chr5	179895836	179896350	-1641909	+	MER34A1	LTR	ERV1	2	586	-1	3
chr5	180048008	180048009	chunk0162_418_1	17.63731	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	180047964	180048371	-1489888	+	L4_A_Mam	LINE	RTE-X	175	585	-4405	3
chr5	180081731	180081732	chunk0162_423_1	33.9375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	180081658	180081929	-1456330	+	L1ME4c	LINE	L1	412	711	-119	3
chr5	180214007	180214008	chunk0162_425_1	5.22673	SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	180213457	180214245	-1324014	+	(GT)n	Simple_repeat	Simple_repeat	1	813	0	3
chr5	180222132	180222133	chunk0162_426_1	6.6833	AR_DHT_Control	chr5	180222070	180222202	-1316057	+	LTR41C	LTR	ERVL	2	145	-556	3
chr5	180537059	180537060	chunk0162_437_1	11.0973	AR_DHT_Control	chr5	180536921	180537619	-1000640	-	L1MC1	LINE	L1	-447	6277	5539	3
chr5	180585034	180585035	chunk0162_439_1	51.0416	AR_DHT_Control	chr5	180585013	180585790	-952469	+	L1M4	LINE	L1	3181	4070	-2076	3
chr5	180605954	180605955	chunk0162_444_1	28.88773	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr5	180605780	180606109	-932150	+	LTR16D	LTR	ERVL	139	481	-170	3
chr5	180666704	180666705	chunk0162_448_1	15.1685	AR_DHT_Control	chr5	180666490	180666779	-871480	+	L1MB8	LINE	L1	5893	6172	-6	3
chr5	180826105	180826106	chunk0162_452_1	18.26238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr5	180826104	180826198	-712061	-	L2a	LINE	L2	0	3426	3334	3
chr5	180929188	180929189	chunk0162_460_1	8.27376	AR_DHT_Control	chr5	180926023	180932355	-605904	+	L1PA7	LINE	L1	1	6456	-13	3
chr5	181263831	181263832	chunk0162_470_1	327.9795	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr5	181263759	181263882	-274377	+	L2a	LINE	L2	3303	3425	-1	3
chr6	264827	264828	chunk0162_3_1	16.31426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	264474	265053	-170540926	-	L1MB4	LINE	L1	-3122	3024	2420	3
chr6	375000	375001	chunk0162_10_1	6.86162	AR_DHT_Control	chr6	374602	375302	-170430677	+	L1MC4a	LINE	L1	6810	7569	-313	3
chr6	581301	581302	chunk0162_11_1	34.77577	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	581011	581312	-170224667	+	AluSz	SINE	Alu	1	299	-13	3
chr6	837614	837615	chunk0162_21_1	12.9987	AR_DHT_Control	chr6	837600	837704	-169968275	-	MIRc	SINE	MIR	-82	148	41	3
chr6	1035603	1035604	chunk0162_33_1	26.87679	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	1035392	1036192	-169769787	-	L2a	LINE	L2	-18	3408	2528	3
chr6	1053827	1053828	chunk0162_37_1	13.55092	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	1053541	1054327	-169751652	+	(ACATAG)n	Simple_repeat	Simple_repeat	1	794	0	3
chr6	1298215	1298216	chunk0162_53_1	8.20681	AR_DHT_Control	chr6	1297555	1298450	-169507529	+	L1MEc	LINE	L1	36	946	-5454	3
chr6	1338072	1338073	chunk0162_55_1	5.6503	AR_DHT_Control	chr6	1337747	1338092	-169467887	+	L3	LINE	CR1	3204	3545	-554	3
chr6	1552423	1552424	chunk0162_62_1	159.0251	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	1552087	1552585	-169253394	+	ERVL-E-int	LTR	ERVL	2273	2860	-2854	3
chr6	1832866	1832867	chunk0162_77_1	151.958	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	1832703	1832882	-168973097	+	L3	LINE	CR1	2318	2497	-1602	3
chr6	2057263	2057264	chunk0162_87_1	9.63462	AR_DHT_Control	chr6	2057224	2057351	-168748628	+	L2a	LINE	L2	3238	3425	-1	3
chr6	2200139	2200140	chunk0162_92_1	22.2836	AR_DHT_Control	chr6	2200064	2200484	-168605495	-	L2a	LINE	L2	0	3426	2934	3
chr6	2264343	2264344	chunk0162_98_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	2264294	2264494	-168541485	+	MLT1B	LTR	ERVL-MaLR	196	390	0	3
chr6	2643371	2643372	chunk0162_106_1	51.4788	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	2643085	2643830	-168162149	+	L1ME1	LINE	L1	5383	6166	-13	3
chr6	2823566	2823567	chunk0162_117_1	5.56779	AR_DHT_Control	chr6	2823404	2823711	-167982268	+	L1ME1	LINE	L1	5792	6171	-8	3
chr6	2864142	2864143	chunk0162_122_1	76.7292	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	2864065	2864149	-167941830	+	L2c	LINE	L2	3300	3386	-1	3
chr6	2963002	2963003	chunk0162_129_1	14.3256	AR_DHT_Control	chr6	2962776	2963263	-167842716	+	L1ME4a	LINE	L1	3920	4426	-1717	3
chr6	2989697	2989698	chunk0162_131_1	4.54685	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	2989586	2990082	-167815897	-	LTR73	LTR	ERV1	-21	551	1	3
chr6	3219833	3219834	chunk0162_142_1	10.6722	AR_DHT_Control	chr6	3219767	3219898	-167586081	+	MIR3	SINE	MIR	74	208	0	3
chr6	3380777	3380778	chunk0162_152_1	4.33434	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	3380697	3381006	-167424973	-	MLT1I	LTR	ERVL-MaLR	0	411	82	3
chr6	3494661	3494662	chunk0162_160_1	19.41716	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	3494656	3494783	-167311196	-	MIR3	SINE	MIR	-31	177	47	3
chr6	3506896	3506897	chunk0162_163_1	161.6636	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	3506854	3507055	-167298924	-	MIRb	SINE	MIR	0	262	33	3
chr6	3509305	3509306	chunk0162_165_1	12.5132	AR_DHT_Control	chr6	3509132	3509509	-167296470	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	3
chr6	3565420	3565421	chunk0162_167_1	26.8431	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	3565083	3565441	-167240538	-	MLT1G1	LTR	ERVL-MaLR	-159	420	63	3
chr6	3675554	3675555	chunk0162_175_1	15.7827	AR_DHT_Control	chr6	3672187	3678310	-167127669	-	L1PA6	LINE	L1	0	6327	177	3
chr6	3677606	3677607	chunk0162_176_1	12.1979	AR_DHT_Control	chr6	3672187	3678310	-167127669	-	L1PA6	LINE	L1	0	6327	177	3
chr6	3702924	3702925	chunk0162_177_1	9.21264	AR_DHT_Control	chr6	3702760	3702935	-167103044	+	(TG)n	Simple_repeat	Simple_repeat	1	176	0	3
chr6	3718496	3718497	chunk0162_179_1	4.56426	AR_DHT_Control	chr6	3718323	3718854	-167087125	+	MER74A	LTR	ERVL	8	554	-4	3
chr6	3762416	3762417	chunk0162_183_1	84.32325	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	3762404	3762484	-167043495	-	L4_B_Mam	LINE	RTE-X	-678	4263	4180	3
chr6	3803944	3803945	chunk0162_185_1	12.8531	AR_DHT_Control	chr6	3803862	3803997	-167001982	-	MARNA	DNA	TcMar-Mariner	-387	199	62	3
chr6	3865339	3865340	chunk0162_190_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	3865208	3865782	-166940197	+	MLT1G3	LTR	ERVL-MaLR	1	589	-6	3
chr6	3878648	3878649	chunk0162_191_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	3877922	3878699	-166927280	-	L1MC4	LINE	L1	-181	7861	6939	3
chr6	3913679	3913680	chunk0162_197_1	63.68975	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	3913491	3913705	-166892274	+	L1MC1	LINE	L1	4713	4927	-1219	3
chr6	3968568	3968569	chunk0162_199_1	14.2738	AR_DHT_Control	chr6	3968455	3968891	-166837088	+	MER57B1	LTR	ERV1	1	401	0	3
chr6	4241769	4241770	chunk0162_215_1	35.6301	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	4241512	4241882	-166564097	-	L1PA11	LINE	L1	-1	6173	5785	3
chr6	4285964	4285965	chunk0162_216_1	6.44773	AR_DHT_Control	chr6	4285736	4286042	-166519937	-	Tigger3c	DNA	TcMar-Tigger	0	602	295	3
chr6	4731139	4731140	chunk0162_231_1	5.29288	AR_DHT_Control	chr6	4731095	4731292	-166074687	-	L3b	LINE	CR1	-520	3579	3410	3
chr6	4738765	4738766	chunk0162_234_1	286.16396	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	4738404	4738879	-166067100	+	L1ME3Cz	LINE	L1	117	615	-382	3
chr6	4806721	4806722	chunk0162_238_1	16.37799	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	4806427	4806837	-165999142	-	L1MC4a	LINE	L1	-2	7880	7417	3
chr6	4829317	4829318	chunk0162_239_1	82.4089	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	4828421	4830082	-165975897	-	L1MB4	LINE	L1	-5642	1978	24	3
chr6	4876877	4876878	chunk0162_240_1	5.46828	AR_DHT_Control	chr6	4876839	4877182	-165928797	+	MLT1A0	LTR	ERVL-MaLR	1	365	0	3
chr6	4961595	4961596	chunk0162_246_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	4961428	4961915	-165844064	+	MLT1F2	LTR	ERVL-MaLR	9	560	0	3
chr6	4982202	4982203	chunk0162_247_1	12.5882	AR_DHT_Control	chr6	4981689	4982230	-165823749	-	MER34B	LTR	ERV1	0	565	5	3
chr6	5034859	5034860	chunk0162_248_1	18.54745	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	5034771	5035225	-165770754	+	Tigger17b	DNA	TcMar-Tigger	607	1073	0	3
chr6	5059373	5059374	chunk0162_249_1	9.94664	AR_DHT_Control	chr6	5059360	5059500	-165746479	-	L1ME4b	LINE	L1	-172	720	576	3
chr6	5134049	5134050	chunk0162_252_1	12.7844	AR_DHT_Control	chr6	5133608	5134179	-165671800	-	L1MB5	LINE	L1	-13	6161	5567	3
chr6	5293212	5293213	chunk0162_263_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	5292260	5293326	-165512653	-	L2c	LINE	L2	-567	2852	1754	3
chr6	5414569	5414570	chunk0162_266_1	14.41719	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	5414253	5414811	-165391168	-	L1ME1	LINE	L1	-15	6337	5775	3
chr6	5439594	5439595	chunk0162_269_1	5.44741	AR_DHT_Control	chr6	5438873	5439628	-165366351	-	L1MEf	LINE	L1	-5440	1038	281	3
chr6	6178957	6178958	chunk0162_284_1	8.2993	AR_DHT_Control	chr6	6178728	6179147	-164626832	-	L2	LINE	L2	-1230	2189	1741	3
chr6	6319232	6319233	chunk0162_289_1	8.14682	AR_DHT_Control	chr6	6319160	6319414	-164486565	-	L2a	LINE	L2	-5	3421	3158	3
chr6	6423007	6423008	chunk0162_295_1	114.2893	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	6422676	6423203	-164382776	+	L1ME5	LINE	L1	5385	5949	-245	3
chr6	6434157	6434158	chunk0162_296_1	7.36432	AR_DHT_Control	chr6	6434016	6434800	-164371179	-	L1ME4b	LINE	L1	-23	869	126	3
chr6	6593966	6593967	chunk0162_306_1	20.0159	AR_DHT_Control	chr6	6593615	6594090	-164211889	-	L4_B_Mam	LINE	RTE-X	-177	4813	4221	3
chr6	6668882	6668883	chunk0162_309_1	75.323	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	6668154	6672990	-164132989	+	L1P2	LINE	L1	1	4824	-1322	3
chr6	6688515	6688516	chunk0162_313_1	160.23504	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	6688502	6688539	-164117440	+	(TTTCCC)n	Simple_repeat	Simple_repeat	1	40	0	3
chr6	6788697	6788698	chunk0162_330_1	36.82606	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	6788485	6788893	-164017086	-	LTR33	LTR	ERVL	-45	470	3	3
chr6	6812778	6812779	chunk0162_334_1	140.69622	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	6812738	6812856	-163993123	+	MIR	SINE	MIR	106	245	-17	3
chr6	6897515	6897516	chunk0162_336_1	5.73469	AR_DHT_Control	chr6	6897223	6897714	-163908265	+	LTR40a	LTR	ERVL	19	519	0	3
chr6	7004163	7004164	chunk0162_344_1	6.5005	AR_DHT_Control	chr6	7004066	7004255	-163801724	+	MIRc	SINE	MIR	30	253	-15	3
chr6	7031675	7031676	chunk0162_346_1	26.44729	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	7031596	7031827	-163774152	+	L2b	LINE	L2	3116	3375	0	3
chr6	7190431	7190432	chunk0162_361_1	26.37227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	7190325	7190438	-163615541	+	MIR	SINE	MIR	137	262	0	3
chr6	7418283	7418284	chunk0162_375_1	26.22618	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	7418048	7418811	-163387168	-	L2a	LINE	L2	0	3426	2474	3
chr6	7658754	7658755	chunk0163_3_1	5.63445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	7658710	7658889	-163147090	-	ERV3-16A3_I-int	LTR	ERVL	-2630	2596	2427	3
chr6	7688041	7688042	chunk0163_7_1	142.7118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	7687759	7688422	-163117557	+	L1ME1	LINE	L1	5458	6152	-27	3
chr6	7781194	7781195	chunk0163_11_1	166.4354	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	7781181	7781328	-163024651	-	MIRc	SINE	MIR	-63	205	59	3
chr6	7894583	7894584	chunk0163_15_1	18.03301	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	7894472	7894824	-162911155	-	Tigger1a_Art	DNA	TcMar-Tigger	0	497	1	3
chr6	7954859	7954860	chunk0163_16_1	4.22747	AR_DHT_Control	chr6	7954714	7954874	-162851105	+	LTR89	LTR	ERVL?	99	252	-627	3
chr6	7981945	7981946	chunk0163_20_1	157.7933	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	7981007	7982316	-162823663	-	L1ME3A	LINE	L1	-2561	3585	2197	3
chr6	8057962	8057963	chunk0163_23_1	92.6558	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	8057842	8058079	-162747900	+	L2c	LINE	L2	3096	3348	-39	3
chr6	8225308	8225309	chunk0163_32_1	40.67449	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	8225246	8225567	-162580412	-	Tigger3b	DNA	TcMar-Tigger	-218	1013	628	3
chr6	8259403	8259404	chunk0163_35_1	54.8439	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	8259403	8259486	-162546493	+	L2c	LINE	L2	3288	3369	-18	3
chr6	8462426	8462427	chunk0163_39_1	76.658	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	8461463	8462955	-162343024	-	L1PA16	LINE	L1	-4399	2235	714	3
chr6	8511144	8511145	chunk0163_41_1	25.5067	AR_DHT_Control	chr6	8510817	8511195	-162294784	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr6	8520131	8520132	chunk0163_42_1	6.48643	AR_DHT_Control	chr6	8519435	8520658	-162285321	+	L1ME1	LINE	L1	4876	6191	-161	3
chr6	8628285	8628286	chunk0163_46_1	46.4726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	8628237	8628333	-162177646	+	MLT1A	LTR	ERVL-MaLR	278	374	0	3
chr6	8851688	8851689	chunk0163_56_1	40.5991	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	8851632	8851725	-161954254	+	MIRc	SINE	MIR	124	211	-57	3
chr6	8922095	8922096	chunk0163_58_1	34.9394	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	8921988	8922277	-161883702	-	L1MC2	LINE	L1	-10	6334	6017	3
chr6	8954676	8954677	chunk0163_61_1	50.0057	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	8954283	8954677	-161851302	+	L1MEd	LINE	L1	926	1319	-5177	3
chr6	8990128	8990129	chunk0163_62_1	11.4584	AR_DHT_Control	chr6	8989997	8990148	-161815831	+	MIRb	SINE	MIR	34	197	-71	3
chr6	9208410	9208411	chunk0163_71_1	25.2123	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	9208248	9209712	-161596267	+	ERVL-E-int	LTR	ERVL	4116	5712	-2	3
chr6	9418529	9418530	chunk0163_81_1	30.75933	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	9418416	9418658	-161387321	+	UCON27	Unknown	Unknown	593	845	-423	3
chr6	9463564	9463565	chunk0163_84_1	158.5244	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	9463539	9463791	-161342188	+	MamRep605	LTR?	LTR?	508	768	-81	3
chr6	9559785	9559786	chunk0163_91_1	35.70874	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	9559778	9559905	-161246074	-	L2c	LINE	L2	-6	3381	3271	3
chr6	9628169	9628170	chunk0163_100_1	66.92295	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	9627949	9628635	-161177344	-	MER72	LTR	ERV1	-2	720	1	3
chr6	9649129	9649130	chunk0163_101_1	9.88994	AR_DHT_Control	chr6	9648652	9649284	-161156695	-	L1MEf	LINE	L1	-5204	1436	760	3
chr6	10127525	10127526	chunk0163_109_1	9.96971	AR_DHT_Control	chr6	10127221	10127660	-160678319	+	LTR40a	LTR	ERVL	6	454	-65	3
chr6	10258494	10258495	chunk0163_118_1	6.17368	AR_DHT_Control	chr6	10256487	10258886	-160547093	+	L1MC1	LINE	L1	3798	6189	-319	3
chr6	10261651	10261652	chunk0163_119_1	23.2449	AR_DHT_Control	chr6	10261540	10261701	-160544278	-	MER104	DNA	TcMar-Tc2	-3	178	1	3
chr6	10273718	10273719	chunk0163_120_1	15.7508	AR_DHT_Control	chr6	10273404	10276771	-160529208	+	L1MD1	LINE	L1	19	3709	-2828	3
chr6	10332404	10332405	chunk0163_125_1	16.843	AR_DHT_Control	chr6	10332359	10332451	-160473528	+	AluSx3	SINE	Alu	210	300	-11	3
chr6	10511262	10511263	chunk0163_129_1	91.5125	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	10511183	10511513	-160294466	-	MER58B	DNA	hAT-Charlie	-3	338	1	3
chr6	10698392	10698393	chunk0163_139_1	90.62434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	10698368	10698473	-160107506	-	MIRb	SINE	MIR	-127	141	19	3
chr6	10711142	10711143	chunk0163_141_1	7.36432	AR_DHT_Control	chr6	10710680	10711500	-160094479	-	L1MD1	LINE	L1	-19	6223	5282	3
chr6	10778345	10778346	chunk0163_143_1	9.21264	AR_DHT_Control	chr6	10778139	10778414	-160027565	-	L2b	LINE	L2	-6	3369	3098	3
chr6	10933428	10933429	chunk0163_148_1	149.037	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	10933407	10933583	-159872396	-	MER5A	DNA	hAT-Charlie	0	189	3	3
chr6	11021160	11021161	chunk0163_154_1	227.0972	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	11021075	11021315	-159784664	+	L2b	LINE	L2	2884	3131	-256	3
chr6	11111001	11111002	chunk0163_164_1	16.77274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	11108229	11111700	-159694279	-	MER50-int	LTR	ERV1	-3871	3334	15	3
chr6	11175945	11175946	chunk0163_167_1	25.0312	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	11175441	11175960	-159630019	+	L2b	LINE	L2	2867	3375	0	3
chr6	11299314	11299315	chunk0163_176_1	16.5991	AR_DHT_Control	chr6	11298870	11304963	-159501016	+	L1PA6	LINE	L1	6	6149	-5	3
chr6	11310414	11310415	chunk0163_179_1	21.4394	AR_DHT_Control	chr6	11310287	11310610	-159495369	+	L2	LINE	L2	1085	1413	-2006	3
chr6	11335465	11335466	chunk0163_182_1	28.55125	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	11334570	11335847	-159470132	+	HSMAR1	DNA	TcMar-Mariner	1	1287	0	3
chr6	11491401	11491402	chunk0163_185_1	4.53037	AR_DHT_Control	chr6	11490990	11491866	-159314113	+	(GT)n	Simple_repeat	Simple_repeat	1	915	0	3
chr6	11635159	11635160	chunk0163_190_1	5.85263	AR_DHT_Control	chr6	11634986	11635220	-159170759	-	MARNA	DNA	TcMar-Mariner	-351	235	12	3
chr6	11686267	11686268	chunk0163_193_1	30.3656	AR_DHT_Control	chr6	11686224	11686388	-159119591	-	LTR50	LTR	ERVL	-476	319	128	3
chr6	11785681	11785682	chunk0163_200_1	129.3835	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	11785508	11785705	-159020274	-	L2c	LINE	L2	-18	3357	3193	3
chr6	11856449	11856450	chunk0163_203_1	8.63095	AR_DHT_Control	chr6	11855739	11856594	-158949385	+	HAL1ME	LINE	L1	1366	2267	-198	3
chr6	11931724	11931725	chunk0163_206_1	8.21385	AR_DHT_Control	chr6	11931667	11931737	-158874242	+	MER5A1	DNA	hAT-Charlie	35	103	-63	3
chr6	12188887	12188888	chunk0163_226_1	15.79945	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	12188436	12189352	-158616627	+	L1M5	LINE	L1	4148	5157	-989	3
chr6	12338094	12338095	chunk0163_240_1	22.8471	AR_DHT_Control	chr6	12337899	12338167	-158467812	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr6	12952562	12952563	chunk0163_256_1	22.68402	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	12952089	12952871	-157853108	-	L1MC1	LINE	L1	-20	6313	5490	3
chr6	12960214	12960215	chunk0163_257_1	23.9459	AR_DHT_Control	chr6	12960063	12960281	-157845698	+	MIRb	SINE	MIR	43	268	0	3
chr6	12979911	12979912	chunk0163_259_1	42.90976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	12979865	12979999	-157825980	-	UCON84	Unknown	Unknown	-94	633	496	3
chr6	13203385	13203386	chunk0163_267_1	6.54035	AR_DHT_Control	chr6	13203354	13203502	-157602477	+	MIR	SINE	MIR	116	261	-1	3
chr6	13310165	13310166	chunk0163_268_1	13.6482	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	13309825	13310355	-157495624	+	L1MC5	LINE	L1	6611	7145	-2159	3
chr6	13316038	13316039	chunk0163_269_1	7.22694	AR_DHT_Control	chr6	13315911	13316151	-157489828	+	MLT1J	LTR	ERVL-MaLR	171	403	-109	3
chr6	13383488	13383489	chunk0163_271_1	8.11543	AR_DHT_Control	chr6	13383278	13383615	-157422364	+	MER119	DNA	hAT-Charlie	1	342	-241	3
chr6	13754208	13754209	chunk0163_285_1	17.8225	AR_DHT_Control	chr6	13754123	13754413	-157051566	-	L2a	LINE	L2	-5	3421	3091	3
chr6	14050022	14050023	chunk0163_290_1	15.2538	AR_DHT_Control	chr6	14049771	14050092	-156755887	-	Tigger3a	DNA	TcMar-Tigger	0	348	18	3
chr6	14093090	14093091	chunk0163_293_1	81.1541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	14093087	14093144	-156712835	-	L2c	LINE	L2	-73	3314	3261	3
chr6	14251161	14251162	chunk0163_297_1	5.69781	AR_DHT_Control	chr6	14251018	14251203	-156554776	+	MIRb	SINE	MIR	40	259	-9	3
chr6	14261579	14261580	chunk0163_298_1	12.5882	AR_DHT_Control	chr6	14261381	14264260	-156541719	+	L1MEg	LINE	L1	2521	5639	-534	3
chr6	14459276	14459277	chunk0163_304_1	110.6156	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	14458294	14459375	-156346604	-	L1ME3A	LINE	L1	-2	6171	5042	3
chr6	14673240	14673241	chunk0163_310_1	5.47663	AR_DHT_Control	chr6	14673166	14673312	-156132667	+	Zaphod3	DNA	hAT-Tip100	8	161	-2462	3
chr6	14696763	14696764	chunk0163_312_1	18.8646	AR_DHT_Control	chr6	14696614	14696922	-156109057	+	Charlie7	DNA	hAT-Charlie	89	403	-2209	3
chr6	14842095	14842096	chunk0163_322_1	12.5708	AR_DHT_Control	chr6	14842020	14842427	-155963552	-	L1ME5	LINE	L1	-248	5946	5542	3
chr6	14889696	14889697	chunk0163_324_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	14889687	14889906	-155916073	-	MER58A	DNA	hAT-Charlie	-1	223	2	3
chr6	14927561	14927562	chunk0163_325_1	21.9545	AR_DHT_Control	chr6	14927298	14927673	-155878306	+	LTR82B	LTR	ERVL	176	684	-146	3
chr6	15293774	15293775	chunk0163_334_1	37.3422	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	15293619	15294082	-155511897	+	MER70C	LTR	ERVL	10	523	-8	3
chr6	15337922	15337923	chunk0163_336_1	10.4378	AR_DHT_Control	chr6	15337165	15339538	-155466441	+	HUERS-P2-int	LTR	ERV1	208	2683	-405	3
chr6	15432712	15432713	chunk0163_342_1	4.96282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	15432673	15432762	-155373217	-	MER51A	LTR	ERV1	-529	105	5	3
chr6	15453803	15453804	chunk0163_347_1	178.0242	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	15453623	15453986	-155351993	-	L1MC4	LINE	L1	-962	7080	6711	3
chr6	15579382	15579383	chunk0163_354_1	9.83377	AR_DHT_Control	chr6	15578775	15579523	-155226456	+	L1MA5	LINE	L1	5368	6148	-152	3
chr6	15638695	15638696	chunk0163_355_1	7.42871	AR_DHT_Control	chr6	15638417	15638838	-155167141	+	L1MC4	LINE	L1	7126	7554	-488	3
chr6	15683874	15683875	chunk0163_358_1	4.88663	AR_DHT_Control	chr6	15683807	15684100	-155121879	+	L2c	LINE	L2	3097	3381	-6	3
chr6	15750071	15750072	chunk0163_360_1	24.41162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	15749985	15750122	-155055857	+	MIRb	SINE	MIR	126	268	0	3
chr6	15985604	15985605	chunk0163_370_1	35.98414	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	15984571	15985895	-154820084	+	L1MC5a	LINE	L1	7	874	-1903	3
chr6	16109251	16109252	chunk0163_372_1	4.40478	AR_DHT_Control	chr6	16109151	16109697	-154696282	+	MER68	LTR	ERVL	11	563	0	3
chr6	16168856	16168857	chunk0163_375_1	163.2427	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	16168790	16168889	-154637090	-	L1ME3Cz	LINE	L1	-3	994	893	3
chr6	16179305	16179306	chunk0163_377_1	8.96258	AR_DHT_Control	chr6	16179141	16179384	-154626595	-	Tigger3a	DNA	TcMar-Tigger	0	348	96	3
chr6	16234099	16234100	chunk0163_379_1	13.91323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	16233855	16234347	-154571632	-	L1PB	LINE	L1	-660	5491	5006	3
chr6	16236116	16236117	chunk0163_380_1	11.4584	AR_DHT_Control	chr6	16235560	16236310	-154569669	-	LTR8	LTR	ERV1	0	691	1	3
chr6	16396990	16396991	chunk0163_385_1	5.37222	AR_DHT_Control	chr6	16396414	16397088	-154408891	+	Tigger3	DNA	TcMar-Tigger	2385	3029	0	3
chr6	16535709	16535710	chunk0163_397_1	26.2467	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	16535236	16535869	-154270110	+	L1MC3	LINE	L1	6708	7332	-453	3
chr6	16564054	16564055	chunk0163_399_1	9.98154	AR_DHT_Control	chr6	16564015	16564154	-154241825	+	MIRb	SINE	MIR	23	162	-100	3
chr6	17039525	17039526	chunk0163_413_1	20.58066	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	17039102	17039885	-153766094	-	L1ME1	LINE	L1	-29	6548	5719	3
chr6	17098141	17098142	chunk0163_419_1	39.7499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	17098089	17098399	-153707580	-	MER58B	DNA	hAT-Charlie	-2	339	21	3
chr6	17151845	17151846	chunk0163_422_1	12.375	AR_DHT_Control	chr6	17151817	17151894	-153654085	+	AmnSINE2	SINE	tRNA-Deu	46	119	-239	3
chr6	17271745	17271746	chunk0163_432_1	9.01771	AR_DHT_Control	chr6	17271708	17271878	-153534101	+	MLT1K	LTR	ERVL-MaLR	337	511	-84	3
chr6	17366235	17366236	chunk0163_434_1	6.7814	AR_DHT_Control	chr6	17366192	17366483	-153439496	-	L1ME1	LINE	L1	-1347	4799	4504	3
chr6	17385307	17385308	chunk0163_435_1	8.17959	AR_DHT_Control	chr6	17385230	17385320	-153420659	-	Tigger5b	DNA	TcMar-Tigger	0	472	383	3
chr6	17395335	17395336	chunk0163_438_1	7.16019	AR_DHT_Control	chr6	17395199	17395523	-153410456	-	MER58B	DNA	hAT-Charlie	-1	340	3	3
chr6	17478641	17478642	chunk0163_441_1	67.9136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	17478626	17478653	-153327326	+	(AAACC)n	Simple_repeat	Simple_repeat	1	27	0	3
chr6	17564688	17564689	chunk0163_449_1	11.0952	AR_DHT_Control	chr6	17564554	17564844	-153241135	-	MER4-int	LTR	ERV1	-2917	3681	3450	3
chr6	17653517	17653518	chunk0164_5_1	40.9241	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	17653262	17653631	-153152348	+	L1ME2z	LINE	L1	5508	5898	-2060	3
chr6	17679111	17679112	chunk0164_6_1	14.3571	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	17679104	17679654	-153126325	+	L1MA4	LINE	L1	4184	4773	-1367	3
chr6	17795686	17795687	chunk0164_11_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	17795614	17795730	-153010249	-	L1ME2	LINE	L1	-470	5694	5581	3
chr6	17961623	17961624	chunk0164_18_1	86.5162	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	17961526	17961768	-152844211	+	L4_A_Mam	LINE	RTE-X	4534	4808	-182	3
chr6	18063044	18063045	chunk0164_22_1	14.70459	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	18062845	18063172	-152742807	-	L1MEg	LINE	L1	-5709	533	231	3
chr6	18183888	18183889	chunk0164_25_1	26.62158	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	18183559	18183963	-152622016	-	L1ME3E	LINE	L1	-225	6017	5613	3
chr6	18289010	18289011	chunk0164_29_1	9.25776	AR_DHT_Control	chr6	18288921	18289053	-152516926	+	L2	LINE	L2	1667	1808	-1611	3
chr6	18446859	18446860	chunk0164_43_1	13.9547	AR_DHT_Control	chr6	18446840	18446893	-152359086	+	(GT)n	Simple_repeat	Simple_repeat	1	54	0	3
chr6	19165610	19165611	chunk0164_54_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	19164684	19166144	-151639835	+	L1MC2	LINE	L1	4859	6343	-1	3
chr6	19181220	19181221	chunk0164_55_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	19181176	19181282	-151624697	+	MIR3	SINE	MIR	89	205	-3	3
chr6	19288116	19288117	chunk0164_58_1	16.06381	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	19288013	19288208	-151517771	-	MIRb	SINE	MIR	0	268	82	3
chr6	19377051	19377052	chunk0164_61_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	19377022	19377163	-151428816	+	MLT1H	LTR	ERVL-MaLR	404	549	0	3
chr6	19536850	19536851	chunk0164_68_1	5.16131	AR_DHT_Control	chr6	19536821	19536902	-151269077	+	L2b	LINE	L2	3292	3372	-3	3
chr6	19556538	19556539	chunk0164_70_1	36.34011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	19556425	19556553	-151249426	+	MIRc	SINE	MIR	135	268	0	3
chr6	19796578	19796579	chunk0164_77_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	19795907	19797478	-151008501	+	L1MD2	LINE	L1	108	2009	-4624	3
chr6	20200869	20200870	chunk0164_90_1	31.06922	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	20200804	20201209	-150604770	+	LTR57	LTR	ERVL	1	411	0	3
chr6	20217603	20217604	chunk0164_91_1	6.62784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	20217455	20217652	-150588327	-	Tigger15a	DNA	TcMar-Tigger	-522	193	1	3
chr6	20218645	20218646	chunk0164_92_1	25.8897	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	20218517	20219283	-150586696	-	L2a	LINE	L2	-7	3419	2639	3
chr6	20230941	20230942	chunk0164_94_1	55.2008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	20230912	20231069	-150574910	+	MIRb	SINE	MIR	3	156	-112	3
chr6	20288201	20288202	chunk0164_96_1	42.15626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	20288169	20288207	-150517772	+	(TACAAA)n	Simple_repeat	Simple_repeat	1	38	0	3
chr6	20353356	20353357	chunk0164_97_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	20353130	20353631	-150452348	+	MLT1G3	LTR	ERVL-MaLR	92	595	0	3
chr6	20381790	20381791	chunk0164_99_1	14.9157	AR_DHT_Control	chr6	20381285	20381881	-150424098	-	LTR8B	LTR	ERV1	-2	818	167	3
chr6	20454314	20454315	chunk0164_101_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	20454144	20454324	-150351655	+	MER5A	DNA	hAT-Charlie	1	186	-3	3
chr6	20637973	20637974	chunk0164_110_1	44.3281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	20637689	20638006	-150167973	-	L1ME4b	LINE	L1	-64	828	508	3
chr6	20681531	20681532	chunk0164_112_1	12.7341	AR_DHT_Control	chr6	20681524	20681699	-150124280	+	LTR41C	LTR	ERVL	1	172	-529	3
chr6	20812977	20812978	chunk0164_119_1	90.0961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	20812430	20813088	-149992891	-	L1ME1	LINE	L1	-68	6111	5385	3
chr6	20821139	20821140	chunk0164_123_1	4.84918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	20820735	20821333	-149984646	-	L2a	LINE	L2	-1	3425	2698	3
chr6	20864425	20864426	chunk0164_125_1	20.24587	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	20864415	20864457	-149941522	-	L2c	LINE	L2	0	3387	3346	3
chr6	21149040	21149041	chunk0164_137_1	18.5363	AR_DHT_Control	chr6	21149008	21149089	-149656890	-	L2c	LINE	L2	-19	3368	3277	3
chr6	21325405	21325406	chunk0164_142_1	222.7572	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	21325307	21325860	-149480119	-	Tigger3b	DNA	TcMar-Tigger	-2	1229	768	3
chr6	21350713	21350714	chunk0164_144_1	4.28375	AR_DHT_Control	chr6	21350482	21351075	-149454904	+	LTR82B	LTR	ERVL	67	717	-113	3
chr6	21360750	21360751	chunk0164_145_1	7.19831	AR_DHT_Control	chr6	21358930	21361143	-149444836	-	HERVL32-int	LTR	ERVL	-1711	3535	1274	3
chr6	21451440	21451441	chunk0164_149_1	8.24382	AR_DHT_Control	chr6	21451331	21452413	-149353566	-	L1MEh	LINE	L1	-7	2500	1200	3
chr6	21958644	21958645	chunk0164_173_1	4.7668	AR_DHT_Control	chr6	21958565	21958914	-148847065	+	L3	LINE	CR1	889	1246	-2853	3
chr6	22001497	22001498	chunk0164_180_1	58.44646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	22001496	22001731	-148804248	-	L3	LINE	CR1	-1227	2872	2656	3
chr6	22133460	22133461	chunk0164_187_1	10.8679	AR_DHT_Control	chr6	22133122	22133686	-148672293	-	MER77	LTR	ERVL	0	604	1	3
chr6	22389936	22389937	chunk0164_197_1	9.63462	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	22384026	22390396	-148415583	-	L1PA8A	LINE	L1	-5	6441	1	3
chr6	22603394	22603395	chunk0164_206_1	6.21501	AR_DHT_Control	chr6	22603290	22603494	-148202485	+	MamRep605	LTR?	LTR?	492	698	-151	3
chr6	22674828	22674829	chunk0164_211_1	15.80916	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	22674313	22675338	-148130641	+	L1MA7	LINE	L1	4769	5822	-469	3
chr6	22928736	22928737	chunk0164_222_1	6.83133	AR_DHT_Control	chr6	22928723	22929146	-147876833	-	LTR33	LTR	ERVL	-57	458	1	3
chr6	23074011	23074012	chunk0164_230_1	15.6556	AR_DHT_Control	chr6	23073540	23074091	-147731888	-	L2a	LINE	L2	-1625	1794	1209	3
chr6	23106227	23106228	chunk0164_231_1	7.36432	AR_DHT_Control	chr6	23105904	23106409	-147699570	+	L1PA16	LINE	L1	4757	5256	-890	3
chr6	23137730	23137731	chunk0164_232_1	5.99997	AR_DHT_Control	chr6	23134708	23138009	-147667970	-	L1MA4	LINE	L1	-3362	4200	719	3
chr6	23191637	23191638	chunk0164_233_1	30.7964	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	23191424	23191815	-147614164	-	L1MCc	LINE	L1	-5244	1793	1168	3
chr6	23257518	23257519	chunk0164_235_1	61.0798	AR_DHT_Control	chr6	23254286	23260419	-147545560	-	L1PA5	LINE	L1	-2	6152	11	3
chr6	23263231	23263232	chunk0164_236_1	9.21264	AR_DHT_Control	chr6	23262784	23263278	-147542701	-	MLT2B4	LTR	ERVL	0	556	1	3
chr6	23289973	23289974	chunk0164_240_1	21.04225	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	23289921	23290050	-147515929	+	L1MC	LINE	L1	3058	3199	-2947	3
chr6	23393345	23393346	chunk0164_248_1	39.2626	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	23393320	23393561	-147412418	-	Tigger6a	DNA	TcMar-Tigger	0	1083	838	3
chr6	23486786	23486787	chunk0164_254_1	8.41215	AR_DHT_Control	chr6	23486253	23486813	-147319166	+	L1MB3	LINE	L1	5565	6181	-2	3
chr6	23566389	23566390	chunk0164_261_1	86.87592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	23566301	23566473	-147239506	-	MIR3	SINE	MIR	-12	196	13	3
chr6	23646838	23646839	chunk0164_263_1	11.2415	AR_DHT_Control	chr6	23646752	23646993	-147158986	-	L2b	LINE	L2	-62	3313	3066	3
chr6	23728914	23728915	chunk0164_273_1	5.41601	AR_DHT_Control	chr6	23728789	23729042	-147076937	-	MLT1J	LTR	ERVL-MaLR	-4	508	238	3
chr6	23952344	23952345	chunk0164_274_1	7.62275	AR_DHT_Control	chr6	23952287	23952604	-146853375	+	X2_LINE	LINE	CR1	390	705	-703	3
chr6	23988981	23988982	chunk0164_276_1	41.3054	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	23988796	23989048	-146816931	+	LTR107_Mam	LTR	LTR	290	544	-26	3
chr6	24016551	24016552	chunk0164_278_1	10.5893	AR_DHT_Control	chr6	24016491	24016657	-146789322	+	MER58A	DNA	hAT-Charlie	51	224	0	3
chr6	24149997	24149998	chunk0164_280_1	12.1886	AR_DHT_Control	chr6	24149826	24150511	-146655468	+	HAL1ME	LINE	L1	639	1411	-1054	3
chr6	24586137	24586138	chunk0164_288_1	33.52683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	24586105	24586238	-146219741	+	MER4A	LTR	ERV1	536	664	0	3
chr6	24734349	24734350	chunk0164_293_1	105.9555	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	24734291	24734609	-146071370	+	L1ME2z	LINE	L1	5555	5907	-537	3
chr6	24810538	24810539	chunk0164_298_1	8.27376	AR_DHT_Control	chr6	24810487	24810606	-145995373	-	L2a	LINE	L2	0	3426	3300	3
chr6	24961219	24961220	chunk0164_307_1	306.84043	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	24961010	24961333	-145844646	-	L2b	LINE	L2	-6	3369	3039	3
chr6	24982922	24982923	chunk0164_308_1	13.6808	AR_DHT_Control	chr6	24982748	24983187	-145822792	+	LTR23	LTR	ERV1	1	435	-2	3
chr6	24990968	24990969	chunk0164_309_1	6.7814	AR_DHT_Control	chr6	24990660	24991472	-145814507	+	LTR102_Mam	LTR	ERVL	3	851	0	3
chr6	25033762	25033763	chunk0164_314_1	54.5904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	25033259	25034088	-145771891	-	L1MC4a	LINE	L1	-853	7029	6113	3
chr6	25075824	25075825	chunk0164_317_1	14.35857	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	25075003	25075869	-145730110	-	Tigger1	DNA	TcMar-Tigger	-1537	881	1	3
chr6	25416490	25416491	chunk0164_344_1	21.62934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	25416313	25416524	-145389455	+	MIR	SINE	MIR	2	221	-41	3
chr6	25479127	25479128	chunk0164_354_1	44.6601	AR_DHT_Control	chr6	25479102	25479298	-145326681	-	L1ME3	LINE	L1	-84	6078	5875	3
chr6	25564555	25564556	chunk0164_361_1	123.7862	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	25564361	25564760	-145241219	+	L4_A_Mam	LINE	RTE-X	4460	4873	-117	3
chr6	25659860	25659861	chunk0164_368_1	74.5433	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	25659744	25659861	-145146118	-	MER70B	LTR	ERVL	-345	233	115	3
chr6	25805019	25805020	chunk0164_370_1	186.1709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	25804161	25806584	-144999395	+	L1PB3	LINE	L1	2123	4913	-1949	3
chr6	25844707	25844708	chunk0164_371_1	14.5159	AR_DHT_Control	chr6	25844483	25844784	-144961195	-	LTR33	LTR	ERVL	-11	504	164	3
chr6	25868659	25868660	chunk0164_373_1	18.0107	AR_DHT_Control	chr6	25868631	25868841	-144937138	+	MIRb	SINE	MIR	11	241	-27	3
chr6	26025506	26025507	chunk0164_382_1	8.22429	AR_DHT_Control	chr6	26025443	26025548	-144780431	+	MER90a	LTR	ERV1	25	141	-473	3
chr6	26113099	26113100	chunk0164_385_1	12.9588	AR_DHT_Control	chr6	26112963	26113105	-144692874	+	L2a	LINE	L2	3276	3426	0	3
chr6	26131739	26131740	chunk0164_386_1	42.2993	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	26131568	26131848	-144674131	-	MLT1B-int	LTR	ERVL-MaLR	-540	831	644	3
chr6	26269320	26269321	chunk0164_393_1	12.89027	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	26268928	26269343	-144536636	+	LTR8	LTR	ERV1	263	691	0	3
chr6	26288254	26288255	chunk0164_395_1	37.9767	AR_DHT_Control	chr6	26288021	26288434	-144517545	-	LTR3	LTR	ERVK	-16	416	1	3
chr6	26296071	26296072	chunk0164_397_1	113.64893	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	26295851	26296266	-144509713	-	LTR3	LTR	ERVK	-16	416	1	3
chr6	26529470	26529471	chunk0164_402_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	26529466	26529575	-144276404	-	L2b	LINE	L2	-32	3343	3230	3
chr6	26544617	26544618	chunk0164_404_1	31.3655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	26544178	26545134	-144260845	-	L1ME3D	LINE	L1	-416	6028	5083	3
chr6	26745597	26745598	chunk0164_410_1	8.27376	AR_DHT_Control	chr6	26744674	26745634	-144060345	+	LTR5_Hs	LTR	ERVK	1	968	0	3
chr6	26761836	26761837	chunk0164_411_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	26761105	26762458	-144043521	+	(CATG)n	Simple_repeat	Simple_repeat	1	1373	0	3
chr6	27020435	27020436	chunk0164_413_1	9.62915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	27020345	27020439	-143785540	+	tRNA-Ile-ATA	tRNA	tRNA	1	74	-3	3
chr6	27076301	27076302	chunk0164_416_1	73.09188	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	27076058	27076384	-143729595	-	L1MEd	LINE	L1	-5576	1527	1196	3
chr6	27106601	27106602	chunk0164_417_1	181.9075	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	27106574	27106796	-143699183	-	MIR	SINE	MIR	-20	242	1	3
chr6	27168273	27168274	chunk0164_420_1	10.1791	AR_DHT_Control	chr6	27167752	27168504	-143637475	+	MER92-int	LTR	ERV1	3462	4191	-1027	3
chr6	27471717	27471718	chunk0164_427_1	6.02617	AR_DHT_Control	chr6	27471007	27472007	-143333972	+	L3	LINE	CR1	2974	4097	-2	3
chr6	27534583	27534584	chunk0164_433_1	23.54569	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	27534429	27534604	-143271375	+	L1MA6	LINE	L1	6112	6298	-2	3
chr6	27568192	27568193	chunk0164_436_1	14.3818	AR_DHT_Control	chr6	27568066	27568241	-143237738	+	MER4A	LTR	ERV1	1	175	-489	3
chr6	27633291	27633292	chunk0164_437_1	7.87682	AR_DHT_Control	chr6	27633162	27633590	-143172389	+	LTR3B	LTR	ERVK	1	434	-3	3
chr6	27791377	27791378	chunk0164_440_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	27791356	27791427	-143014552	-	tRNA-Gln-CAA	tRNA	tRNA	-4	71	1	3
chr6	27837020	27837021	chunk0164_443_1	63.50523	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	27836796	27837025	-142968954	-	AluJo	SINE	Alu	-27	285	37	3
chr6	28049201	28049202	chunk0164_445_1	56.69778	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	28049045	28050129	-142755850	+	L1MEg2	LINE	L1	2	1000	-5452	3
chr6	28080141	28080142	chunk0164_448_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	28079856	28080354	-142725625	+	LTR10A	LTR	ERV1	1	506	-103	3
chr6	28112744	28112745	chunk0164_449_1	4.83532	AR_DHT_Control	chr6	28111533	28113100	-142692879	-	L1MEi	LINE	L1	-517	1695	6	3
chr6	28283058	28283059	chunk0164_450_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	28282925	28283366	-142522613	-	MLT1H2	LTR	ERVL-MaLR	-2	487	35	3
chr6	28355777	28355778	chunk0164_452_1	6.75904	AR_DHT_Control	chr6	28355623	28355921	-142450058	-	HERVL18-int	LTR	ERVL	-3570	2477	2119	3
chr6	28487575	28487576	chunk0165_1_1	12.4453	AR_DHT_Control	chr6	28487355	28487710	-142318269	-	MER83	LTR	ERV1	-76	372	1	3
chr6	28525243	28525244	chunk0165_2_1	8.2993	AR_DHT_Control	chr6	28525145	28525462	-142280517	-	L1M5	LINE	L1	-500	5624	5280	3
chr6	28683089	28683090	chunk0165_9_1	86.9637	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	28682590	28683408	-142122571	+	LTR5_Hs	LTR	ERVK	189	965	-3	3
chr6	28692753	28692754	chunk0165_10_1	5.85263	AR_DHT_Control	chr6	28692010	28692958	-142113021	+	LTR5_Hs	LTR	ERVK	1	968	0	3
chr6	28751363	28751364	chunk0165_13_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	28750530	28751435	-142054544	+	L1MDa	LINE	L1	2750	3730	-2807	3
chr6	28978323	28978324	chunk0165_17_1	10.3855	AR_DHT_Control	chr6	28978054	28978533	-141827446	+	MER31A	LTR	ERV1	1	477	-8	3
chr6	28985724	28985725	chunk0165_19_1	7.20445	AR_DHT_Control	chr6	28985713	28985796	-141820183	+	AluJo	SINE	Alu	45	125	-187	3
chr6	29323997	29323998	chunk0165_22_1	44.6051	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	29323980	29324136	-141481843	-	MIR	SINE	MIR	-19	249	33	3
chr6	29516656	29516657	chunk0165_23_1	14.5768	AR_DHT_Control	chr6	29516135	29516661	-141289318	+	L1M5	LINE	L1	5285	5822	-357	3
chr6	29738518	29738519	chunk0165_27_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	29738478	29738531	-141067448	+	A-rich	Low_complexity	Low_complexity	1	54	0	3
chr6	29775451	29775452	chunk0165_28_1	51.5892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	29774808	29775633	-141030346	+	Charlie9	DNA	hAT-Charlie	1251	2075	-682	3
chr6	29810525	29810526	chunk0165_29_1	13.8249	AR_DHT_Control	chr6	29810339	29810678	-140995301	-	Charlie1a	DNA	hAT-Charlie	-1018	437	38	3
chr6	29904581	29904582	chunk0165_31_1	10.4206	AR_DHT_Control	chr6	29904297	29904640	-140901339	-	Charlie1a	DNA	hAT-Charlie	-994	461	40	3
chr6	29920595	29920596	chunk0165_34_1	88.9458	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	29919785	29920615	-140885364	+	Charlie9	DNA	hAT-Charlie	1264	2070	-687	3
chr6	29951961	29951962	chunk0165_35_1	8.95381	AR_DHT_Control	chr6	29951946	29952160	-140853819	+	Charlie9	DNA	hAT-Charlie	89	287	-2470	3
chr6	29989685	29989686	chunk0165_37_1	105.1001	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	29989387	29990095	-140815884	+	L1ME2	LINE	L1	5374	6152	-12	3
chr6	30051055	30051056	chunk0165_38_1	19.13627	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	30050723	30051431	-140754548	+	L1MB7	LINE	L1	5441	6123	-61	3
chr6	30051637	30051638	chunk0165_40_1	18.83614	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	30051494	30051776	-140754203	-	L1MA4A	LINE	L1	-6	6297	5996	3
chr6	30206900	30206901	chunk0165_46_1	11.2505	AR_DHT_Control	chr6	30206834	30206977	-140599002	-	MIR3	SINE	MIR	-60	148	10	3
chr6	30208105	30208106	chunk0165_47_1	35.50774	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	30207672	30208110	-140597869	+	L2c	LINE	L2	2914	3367	-20	3
chr6	30213987	30213988	chunk0165_49_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	30213981	30214046	-140591933	-	MIRc	SINE	MIR	-114	154	90	3
chr6	30799308	30799309	chunk0165_60_1	8.35541	AR_DHT_Control	chr6	30799073	30799502	-140006477	-	LTR47B2	LTR	ERVL	-2	432	1	3
chr6	30946353	30946354	chunk0165_64_1	7.69414	AR_DHT_Control	chr6	30946242	30946467	-139859512	-	MIRb	SINE	MIR	-45	223	2	3
chr6	30998963	30998964	chunk0165_65_1	14.9872	AR_DHT_Control	chr6	30998931	30999444	-139806535	+	ERV24_Prim-int	LTR	ERV1	6365	6893	-682	3
chr6	31072860	31072861	chunk0165_66_1	7.56068	AR_DHT_Control	chr6	31072811	31073063	-139732916	+	L1ME4a	LINE	L1	5619	5887	-237	3
chr6	31076850	31076851	chunk0165_67_1	8.0668	AR_DHT_Control	chr6	31076711	31076922	-139729057	-	L4_A_Mam	LINE	RTE-X	-1486	3455	3234	3
chr6	31186560	31186561	chunk0165_73_1	40.31769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	31186290	31186769	-139619210	-	LTR2B	LTR	ERV1	0	483	1	3
chr6	31203542	31203543	chunk0165_75_1	16.80097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	31203450	31204048	-139601931	+	LTR43	LTR	ERV1	1	602	0	3
chr6	31216370	31216371	chunk0165_77_1	17.9956	AR_DHT_Control	chr6	31216286	31216793	-139589186	+	LTR10B1	LTR	ERV1	1	541	-6	3
chr6	31360434	31360435	chunk0165_83_1	10.1791	AR_DHT_Control	chr6	31360363	31360452	-139445527	-	L1MD	LINE	L1	-1969	4177	4089	3
chr6	31424165	31424166	chunk0165_84_1	6.48643	AR_DHT_Control	chr6	31424093	31424269	-139381710	-	MER41D	LTR	ERV1	-336	221	47	3
chr6	31540764	31540765	chunk0165_85_1	14.0921	AR_DHT_Control	chr6	31540756	31540974	-139265005	+	L1MDa	LINE	L1	1274	1481	-5152	3
chr6	31677698	31677699	chunk0165_86_1	10.5893	AR_DHT_Control	chr6	31677506	31677971	-139128008	+	L1ME3G	LINE	L1	396	882	-10	3
chr6	31875435	31875436	chunk0165_88_1	4.63256	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	31875262	31875442	-138930537	+	MIR	SINE	MIR	64	262	0	3
chr6	31875435	31875436	chunk0165_88_1	4.63256	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	31875384	31875640	-138930339	-	MIRb	SINE	MIR	-26	242	3	3
chr6	31919813	31919814	chunk0165_92_1	59.81859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	31919444	31919910	-138886069	-	L1ME4b	LINE	L1	-12	880	434	3
chr6	32155459	32155460	chunk0165_95_1	9.50747	AR_DHT_Control	chr6	32155427	32155563	-138650416	+	MIRc	SINE	MIR	11	143	-125	3
chr6	32260295	32260296	chunk0165_98_1	26.26505	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	32257110	32261754	-138544225	-	L1PA7	LINE	L1	-1	6468	1815	3
chr6	32272717	32272718	chunk0165_99_1	5.34021	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	32270922	32273965	-138532014	+	L1PB1	LINE	L1	2416	5459	-692	3
chr6	32412101	32412102	chunk0165_107_1	13.08039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	32412025	32412148	-138393831	-	MIR3	SINE	MIR	-61	147	3	3
chr6	32429565	32429566	chunk0165_108_1	86.2643	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	32429234	32430022	-138375957	-	MER6	DNA	TcMar-Tigger	-83	782	1	3
chr6	32555326	32555327	chunk0165_110_1	11.9934	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	32555238	32555433	-138250546	+	MIR	SINE	MIR	1	206	-56	3
chr6	32722989	32722990	chunk0165_111_1	9.30518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	32722870	32723565	-138082414	+	Tigger13a	DNA	TcMar-Tigger	25	740	-31	3
chr6	32881700	32881701	chunk0165_114_1	31.29229	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	32881507	32881970	-137924009	+	L1MD1	LINE	L1	5881	6281	-352	3
chr6	32901165	32901166	chunk0165_115_1	7.63982	AR_DHT_Control	chr6	32901139	32901336	-137904643	-	Charlie2b	DNA	hAT-Charlie	-2148	634	407	3
chr6	32909459	32909460	chunk0165_116_1	9.70208	AR_DHT_Control	chr6	32909374	32909479	-137896500	-	L2b	LINE	L2	-17	3358	3252	3
chr6	32910091	32910092	chunk0165_118_1	36.90812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	32910010	32910239	-137895740	+	Charlie7a	DNA	hAT-Charlie	1	241	-31	3
chr6	32965076	32965077	chunk0165_124_1	205.7135	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	32965066	32965204	-137840775	+	MIR	SINE	MIR	110	252	-10	3
chr6	33139932	33139933	chunk0165_127_1	6.48643	AR_DHT_Control	chr6	33139750	33140149	-137665830	-	MER57B1	LTR	ERV1	0	401	1	3
chr6	33348976	33348977	chunk0165_134_1	9.14794	AR_DHT_Control	chr6	33348905	33350808	-137455171	+	HERVH-int	LTR	ERV1	5594	7503	-210	3
chr6	33374601	33374602	chunk0165_135_1	13.2699	AR_DHT_Control	chr6	33374163	33374646	-137431333	+	LTR29	LTR	ERV1	1	558	-64	3
chr6	33632155	33632156	chunk0165_145_1	26.0787	AR_DHT_Control	chr6	33632103	33632303	-137173676	+	MIR3	SINE	MIR	20	208	0	3
chr6	33759099	33759100	chunk0165_157_1	9.49153	AR_DHT_Control	chr6	33758898	33759278	-137046701	+	HAL1	LINE	L1	2061	2486	-21	3
chr6	33828507	33828508	chunk0165_161_1	90.8713	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	33827862	33828529	-136977450	+	L2a	LINE	L2	2589	3355	-71	3
chr6	33974146	33974147	chunk0165_165_1	8.16452	AR_DHT_Control	chr6	33973595	33974189	-136831790	+	L1ME1	LINE	L1	5066	5634	-545	3
chr6	34050636	34050637	chunk0165_167_1	16.0516	AR_DHT_Control	chr6	34050276	34050657	-136755322	+	MSTB	LTR	ERVL-MaLR	1	426	0	3
chr6	34224815	34224816	chunk0165_169_1	135.1496	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr6	34224677	34224852	-136581127	-	L2a	LINE	L2	-4	3422	3258	3
chr6	34277076	34277077	chunk0165_172_1	6.54253	AR_DHT_Control	chr6	34276938	34277117	-136528862	+	L2	LINE	L2	2826	3017	-402	3
chr6	34303571	34303572	chunk0165_173_1	6.83133	AR_DHT_Control	chr6	34303271	34303685	-136502294	-	L1M5	LINE	L1	-1812	4334	3912	3
chr6	34359853	34359854	chunk0165_181_1	26.42728	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	34359399	34359958	-136446021	-	L1MB5	LINE	L1	-144	6030	5443	3
chr6	34659054	34659055	chunk0165_205_1	6.13982	AR_DHT_Control	chr6	34658992	34659220	-136146759	-	L2b	LINE	L2	-2	3373	3144	3
chr6	34731922	34731923	chunk0165_207_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	34731850	34731963	-136074016	+	MLT1J2	LTR	ERVL-MaLR	321	448	0	3
chr6	34811181	34811182	chunk0165_208_1	26.2653	AR_DHT_Control	chr6	34811153	34811441	-135994538	+	L1M5	LINE	L1	4518	4826	-1320	3
chr6	35304523	35304524	chunk0165_223_1	4.96282	AR_DHT_Control	chr6	35304329	35304660	-135501319	-	L2a	LINE	L2	-263	3163	2842	3
chr6	35332464	35332465	chunk0165_224_1	19.2285	AR_DHT_Control	chr6	35331964	35336436	-135469543	+	L1P2	LINE	L1	185	4649	-1670	3
chr6	35415251	35415252	chunk0165_230_1	7.11634	AR_DHT_Control	chr6	35415127	35415281	-135390698	-	L2b	LINE	L2	-6	3369	3214	3
chr6	35547796	35547797	chunk0165_232_1	14.54701	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	35547503	35548172	-135257807	-	L1M7	LINE	L1	-4565	1653	932	3
chr6	35611104	35611105	chunk0165_240_1	231.0168	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	35610941	35611311	-135194668	-	HAL1ME	LINE	L1	-2062	403	40	3
chr6	35623497	35623498	chunk0165_242_1	7.36432	AR_DHT_Control	chr6	35623415	35623571	-135182408	-	L1ME4b	LINE	L1	-424	468	298	3
chr6	35640285	35640286	chunk0165_246_1	32.94242	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	35640114	35640974	-135165005	-	Tigger3b	DNA	TcMar-Tigger	0	1231	356	3
chr6	35663351	35663352	chunk0165_247_1	82.18534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	35663193	35663474	-135142505	-	L2	LINE	L2	-338	3081	2790	3
chr6	35715606	35715607	chunk0165_252_1	8.85743	AR_DHT_Control	chr6	35715519	35715672	-135090307	-	L2c	LINE	L2	-263	3124	2967	3
chr6	35722633	35722634	chunk0165_254_1	499.048	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	35722511	35722816	-135083163	+	L2c	LINE	L2	2870	3194	-193	3
chr6	35726994	35726995	chunk0165_258_1	44.4616	AR_DHT_Control	chr6	35726871	35727151	-135078828	-	L2c	LINE	L2	-58	3329	3022	3
chr6	35728127	35728128	chunk0165_259_1	112.8992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	35728126	35728152	-135077827	+	(CGGG)n	Simple_repeat	Simple_repeat	1	26	0	3
chr6	35732008	35732009	chunk0165_261_1	116.40385	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	35731962	35732013	-135073966	+	G-rich	Low_complexity	Low_complexity	1	51	0	3
chr6	35782574	35782575	chunk0165_264_1	113.8642	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	35782322	35782667	-135023312	-	L2a	LINE	L2	-2	3424	3010	3
chr6	35796068	35796069	chunk0165_266_1	7.12698	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	35796021	35796159	-135009820	+	MIR3	SINE	MIR	7	142	-126	3
chr6	35859778	35859779	chunk0165_268_1	7.12934	AR_DHT_Control	chr6	35859746	35859842	-134946137	+	L2b	LINE	L2	3289	3387	0	3
chr6	35952419	35952420	chunk0165_271_1	11.02504	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	35952401	35952488	-134853491	-	MER134	DNA?	DNA?	-417	96	10	3
chr6	36116383	36116384	chunk0165_281_1	6.17841	AR_DHT_Control	chr6	36116337	36116385	-134689594	-	AluJo	SINE	Alu	-15	297	249	3
chr6	36154460	36154461	chunk0165_282_1	6.98475	AR_DHT_Control	chr6	36154309	36154956	-134651023	+	L1M4a2	LINE	L1	72	1107	-1549	3
chr6	36199749	36199750	chunk0165_283_1	13.3198	AR_DHT_Control	chr6	36199738	36199820	-134606159	+	L2c	LINE	L2	3220	3315	-72	3
chr6	36349451	36349452	chunk0165_290_1	239.6388	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	36348785	36349462	-134456517	-	LTR83	LTR	ERVL	-5	775	27	3
chr6	36455546	36455547	chunk0165_294_1	67.161	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	36455434	36455561	-134350418	-	L1MEg	LINE	L1	-5826	1507	1405	3
chr6	36558108	36558109	chunk0165_296_1	4.63256	AR_DHT_Control	chr6	36558091	36558352	-134247627	-	L1ME4b	LINE	L1	-3	889	590	3
chr6	36829996	36829997	chunk0165_302_1	26.9513	AR_DHT_Control	chr6	36829983	36830189	-133975790	-	MIR	SINE	MIR	-1	261	33	3
chr6	37109931	37109932	chunk0165_316_1	71.15344	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	37109843	37110107	-133695872	+	MIRc	SINE	MIR	7	268	0	3
chr6	37128428	37128429	chunk0165_320_1	6.54035	AR_DHT_Control	chr6	37128392	37128467	-133677512	+	L2c	LINE	L2	3308	3374	-1	3
chr6	37161424	37161425	chunk0165_322_1	13.7636	AR_DHT_Control	chr6	37161409	37161593	-133644386	-	CR1_Mam	LINE	CR1	-1265	939	735	3
chr6	37167435	37167436	chunk0165_323_1	63.8226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	37167347	37167581	-133638398	-	MIR	SINE	MIR	-1	261	8	3
chr6	37178437	37178438	chunk0165_325_1	5.6425	AR_DHT_Control	chr6	37178424	37178637	-133627342	+	L1ME3C	LINE	L1	6000	6232	-10	3
chr6	37244599	37244600	chunk0165_326_1	7.53305	AR_DHT_Control	chr6	37244569	37244611	-133561368	-	MLT1H	LTR	ERVL-MaLR	-23	539	499	3
chr6	37245039	37245040	chunk0165_327_1	4.57744	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	37244687	37245134	-133560845	-	MLT1H	LTR	ERVL-MaLR	-25	524	105	3
chr6	37259878	37259879	chunk0165_328_1	10.528	AR_DHT_Control	chr6	37259702	37259923	-133546056	+	MIRb	SINE	MIR	34	260	-8	3
chr6	37339862	37339863	chunk0165_332_1	8.03415	AR_DHT_Control	chr6	37339514	37339968	-133466011	-	L1MEf	LINE	L1	-5618	624	47	3
chr6	37367794	37367795	chunk0165_334_1	7.59397	AR_DHT_Control	chr6	37367707	37367931	-133438048	-	MIR	SINE	MIR	-10	252	2	3
chr6	37826934	37826935	chunk0165_340_1	10.2986	AR_DHT_Control	chr6	37826806	37826996	-132978983	-	MER3	DNA	hAT-Charlie	-2	207	1	3
chr6	37891653	37891654	chunk0165_343_1	28.4638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	37891613	37891728	-132914251	+	L1M4	LINE	L1	2570	2676	-3470	3
chr6	37966961	37966962	chunk0165_347_1	75.5111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	37966630	37967186	-132838793	-	L1MC4	LINE	L1	-151	7891	7224	3
chr6	38159968	38159969	chunk0165_363_1	7.78938	AR_DHT_Control	chr6	38159534	38160665	-132645314	+	Arthur1B	DNA	hAT-Tip100	8	1214	-11	3
chr6	38185849	38185850	chunk0165_367_1	7.74745	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	38185668	38186220	-132619759	-	L1ME3B	LINE	L1	-186	6056	5469	3
chr6	38272421	38272422	chunk0165_371_1	16.38264	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	38272280	38272455	-132533524	-	MamSINE1	SINE	tRNA-RTE	-19	271	94	3
chr6	38461206	38461207	chunk0165_384_1	19.8997	AR_DHT_Control	chr6	38461159	38462794	-132343185	-	L1ME1	LINE	L1	-2	6177	4439	3
chr6	38708612	38708613	chunk0165_389_1	18.0019	AR_DHT_Control	chr6	38708067	38708828	-132097151	+	L1ME3E	LINE	L1	5392	6199	-43	3
chr6	38803417	38803418	chunk0165_394_1	65.5768	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	38803361	38803603	-132002376	-	MER68	LTR	ERVL	-315	248	6	3
chr6	38861441	38861442	chunk0165_403_1	41.9786	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	38861416	38861500	-131944479	+	L1MC5	LINE	L1	9211	9291	-13	3
chr6	38885738	38885739	chunk0165_404_1	8.73763	AR_DHT_Control	chr6	38885258	38885996	-131919983	+	L2a	LINE	L2	2574	3424	-2	3
chr6	38900497	38900498	chunk0165_405_1	31.07904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	38900053	38900622	-131905357	-	L1ME3A	LINE	L1	-79	6094	5466	3
chr6	39019945	39019946	chunk0165_410_1	4.53037	AR_DHT_Control	chr6	39018726	39019989	-131785990	-	L2b	LINE	L2	-1253	2166	830	3
chr6	39097480	39097481	chunk0165_414_1	5.25353	AR_DHT_Control	chr6	39097078	39097532	-131708447	+	L1MC4	LINE	L1	2044	2495	-3720	3
chr6	39100143	39100144	chunk0165_415_1	13.1677	AR_DHT_Control	chr6	39099702	39100299	-131705680	+	L1ME4b	LINE	L1	1	641	-251	3
chr6	39451129	39451130	chunk0165_419_1	10.4518	AR_DHT_Control	chr6	39451115	39451397	-131354582	-	L2a	LINE	L2	0	3426	3119	3
chr6	39465736	39465737	chunk0165_421_1	48.7242	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	39465372	39466169	-131339810	+	L2c	LINE	L2	2537	3375	0	3
chr6	39965116	39965117	chunk0165_434_1	32.5131	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	39964949	39965915	-130840064	+	L1MEd	LINE	L1	2115	3153	-2993	3
chr6	40295293	40295294	chunk0165_436_1	6.0927	AR_DHT_Control	chr6	40295034	40295485	-130510494	-	LTR16E2	LTR	ERVL	-2	566	89	3
chr6	40376591	40376592	chunk0165_438_1	20.5368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	40376056	40376831	-130429148	+	L1MB5	LINE	L1	5264	6023	-151	3
chr6	40396865	40396866	chunk0165_440_1	107.4559	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	40396860	40396979	-130409000	-	MIR	SINE	MIR	0	262	120	3
chr6	40409453	40409454	chunk0165_442_1	20.6283	AR_DHT_Control	chr6	40409312	40409465	-130396514	+	MIRb	SINE	MIR	81	226	-42	3
chr6	40436453	40436454	chunk0165_443_1	15.6556	AR_DHT_Control	chr6	40436266	40436477	-130369502	+	MER58A	DNA	hAT-Charlie	13	224	0	3
chr6	40543504	40543505	chunk0165_444_1	4.88663	AR_DHT_Control	chr6	40543450	40543522	-130262457	+	(TCCTCCC)n	Simple_repeat	Simple_repeat	1	74	0	3
chr6	40618061	40618062	chunk0165_447_1	23.7986	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	40617141	40618105	-130187874	-	L1ME2z	LINE	L1	-2552	3594	2606	3
chr6	40619612	40619613	chunk0165_448_1	6.46409	AR_DHT_Control	chr6	40619534	40619787	-130186192	+	MLT1C	LTR	ERVL-MaLR	185	467	0	3
chr6	40733070	40733071	chunk0165_451_1	141.1502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	40732675	40733768	-130072211	+	L1ME2z	LINE	L1	5237	6437	-7	3
chr6	40918525	40918526	chunk0165_454_1	11.7904	AR_DHT_Control	chr6	40918485	40919221	-129886758	+	LTR1A2	LTR	ERV1	39	749	-88	3
chr6	40962256	40962257	chunk0165_457_1	7.57442	AR_DHT_Control	chr6	40962198	40962291	-129843688	+	MIR3	SINE	MIR	111	206	-2	3
chr6	40974269	40974270	chunk0165_458_1	24.2231	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	40973278	40979977	-129826002	-	L1PREC2	LINE	L1	-3	6777	13	3
chr6	41091480	41091481	chunk0165_460_1	11.6192	AR_DHT_Control	chr6	41091464	41091523	-129714456	+	(TTGTT)n	Simple_repeat	Simple_repeat	1	56	0	3
chr6	41142830	41142831	chunk0165_461_1	10.1791	AR_DHT_Control	chr6	41142491	41146623	-129659356	-	L1MB7	LINE	L1	-41	6641	2450	3
chr6	41219505	41219506	chunk0165_462_1	8.97818	AR_DHT_Control	chr6	41219284	41221249	-129584730	-	L1M2	LINE	L1	-2611	5384	3314	3
chr6	41287827	41287828	chunk0165_464_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	41287387	41287949	-129518030	+	L1M6	LINE	L1	1189	1774	-4722	3
chr6	41288689	41288690	chunk0165_465_1	4.96282	AR_DHT_Control	chr6	41288621	41288774	-129517205	-	Tigger3c	DNA	TcMar-Tigger	-1	601	447	3
chr6	41322819	41322820	chunk0166_1_1	15.2379	AR_DHT_Control	chr6	41322545	41323089	-129482890	-	L1M5	LINE	L1	-1096	5050	4473	3
chr6	41330298	41330299	chunk0166_2_1	15.7243	AR_DHT_Control	chr6	41330205	41330893	-129475086	-	L1ME3G	LINE	L1	-63	1115	421	3
chr6	41338832	41338833	chunk0166_3_1	10.8162	AR_DHT_Control	chr6	41337149	41339057	-129466922	-	Charlie10	DNA	hAT-Charlie	-50	2772	748	3
chr6	41435253	41435254	chunk0166_5_1	4.29711	AR_DHT_Control	chr6	41434838	41435765	-129370214	-	L1MC3	LINE	L1	-169	7616	6703	3
chr6	41505965	41505966	chunk0166_7_1	28.5857	AR_DHT_Control	chr6	41505927	41506107	-129299872	-	L2b	LINE	L2	0	3426	3211	3
chr6	41623574	41623575	chunk0166_13_1	23.137	AR_DHT_Control	chr6	41623430	41623654	-129182325	+	L2c	LINE	L2	1710	1926	-1493	3
chr6	41747784	41747785	chunk0166_20_1	248.9176	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	41747742	41747948	-129058031	-	MER20	DNA	hAT-Charlie	0	219	2	3
chr6	41859539	41859540	chunk0166_24_1	105.3947	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	41859004	41859623	-128946356	+	L2c	LINE	L2	2647	3424	-2	3
chr6	42083532	42083533	chunk0166_32_1	9.39801	AR_DHT_Control	chr6	42083476	42083568	-128722411	-	L1ME4b	LINE	L1	-618	274	169	3
chr6	42117263	42117264	chunk0166_33_1	9.95686	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	42117190	42117450	-128688529	-	MIR	SINE	MIR	-8	260	2	3
chr6	42339697	42339698	chunk0166_44_1	12.9225	AR_DHT_Control	chr6	42339615	42339798	-128466181	+	MER124	DNA?	DNA?	174	361	-36	3
chr6	42354833	42354834	chunk0166_45_1	8.27376	AR_DHT_Control	chr6	42354398	42354974	-128451005	-	L1M5	LINE	L1	-977	5169	4547	3
chr6	42528513	42528514	chunk0166_47_1	10.52849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	42528431	42528780	-128277199	-	Tigger3a	DNA	TcMar-Tigger	0	348	3	3
chr6	42749296	42749297	chunk0166_49_1	9.79111	AR_DHT_Control	chr6	42749265	42749682	-128056297	+	L1MA4	LINE	L1	5869	6294	-6	3
chr6	42779709	42779710	chunk0166_50_1	29.41646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	42779666	42779712	-128026267	-	AluSz6	SINE	Alu	-10	302	257	3
chr6	42954501	42954502	chunk0166_63_1	63.374	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	42954337	42954909	-127851070	+	LTR10C	LTR	ERV1	11	586	-5	3
chr6	43367662	43367663	chunk0166_78_1	7.36432	AR_DHT_Control	chr6	43367374	43367689	-127438290	-	L2b	LINE	L2	-611	2808	2463	3
chr6	43628487	43628488	chunk0166_81_1	20.49771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	43628470	43628505	-127177474	+	(TG)n	Simple_repeat	Simple_repeat	1	35	0	3
chr6	43683904	43683905	chunk0166_83_1	96.2194	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	43683886	43683998	-127121981	-	UCON55	DNA	TcMar-Tigger	-68	124	3	3
chr6	43704975	43704976	chunk0166_87_1	72.0996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	43704790	43705072	-127100907	-	L1ME4b	LINE	L1	-37	855	561	3
chr6	43706795	43706796	chunk0166_89_1	90.668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	43706785	43706852	-127099127	-	L1MC	LINE	L1	-2065	5817	5751	3
chr6	43726824	43726825	chunk0166_92_1	13.7525	AR_DHT_Control	chr6	43726789	43726938	-127079041	-	MIR	SINE	MIR	0	262	86	3
chr6	43753775	43753776	chunk0166_98_1	83.3766	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	43753329	43753855	-127052124	-	HAL1	LINE	L1	-1187	1320	782	3
chr6	43813351	43813352	chunk0166_100_1	26.9513	AR_DHT_Control	chr6	43813247	43813422	-126992557	-	L2b	LINE	L2	-221	3154	2980	3
chr6	43846787	43846788	chunk0166_102_1	26.9663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	43845790	43846940	-126959039	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	3
chr6	43850089	43850090	chunk0166_103_1	43.6591	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	43850065	43850212	-126955767	+	L2a	LINE	L2	3218	3376	-50	3
chr6	43919462	43919463	chunk0166_107_1	35.0589	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	43919348	43920011	-126885968	+	L1MC3	LINE	L1	5731	6369	-1416	3
chr6	43957446	43957447	chunk0166_108_1	6.48643	AR_DHT_Control	chr6	43957127	43958503	-126847476	+	Tigger2	DNA	TcMar-Tigger	4	1425	-1293	3
chr6	44156533	44156534	chunk0166_110_1	34.01939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	44156528	44156569	-126649410	+	A-rich	Low_complexity	Low_complexity	1	43	0	3
chr6	44415709	44415710	chunk0166_115_1	14.2911	AR_DHT_Control	chr6	44415374	44415847	-126390132	-	MLT1J	LTR	ERVL-MaLR	0	512	1	3
chr6	44640367	44640368	chunk0166_125_1	158.2613	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	44640356	44640486	-126165493	-	MIR3	SINE	MIR	-88	120	2	3
chr6	44721241	44721242	chunk0166_130_1	44.9286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	44721240	44721321	-126084658	+	UCON37	Unknown	Unknown	2	95	-48	3
chr6	44790018	44790019	chunk0166_133_1	8.02791	AR_DHT_Control	chr6	44789949	44790028	-126015951	-	UCON26	Unknown	Unknown	-175	168	91	3
chr6	44809557	44809558	chunk0166_134_1	26.7703	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	44809396	44809671	-125996308	+	UCON4	Unknown	Unknown	34	303	0	3
chr6	44825681	44825682	chunk0166_136_1	5.98896	AR_DHT_Control	chr6	44825443	44825691	-125980288	+	MIR	SINE	MIR	4	266	-2	3
chr6	45114212	45114213	chunk0166_150_1	5.83706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	45114186	45114394	-125691585	-	L2a	LINE	L2	-2	3424	3213	3
chr6	45284007	45284008	chunk0166_155_1	13.2288	AR_DHT_Control	chr6	45281107	45287253	-125518726	+	L1PA4	LINE	L1	2	6154	-1	3
chr6	45749073	45749074	chunk0166_163_1	42.959	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	45748963	45749079	-125056900	-	MLT1I	LTR	ERVL-MaLR	-59	352	227	3
chr6	45828192	45828193	chunk0166_166_1	102.81951	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	45828140	45828324	-124977655	+	MIR3	SINE	MIR	5	197	-11	3
chr6	46024558	46024559	chunk0166_174_1	95.9945	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	46024282	46024699	-124781280	+	MLT1K	LTR	ERVL-MaLR	142	577	-18	3
chr6	46144428	46144429	chunk0166_186_1	13.5952	AR_DHT_Control	chr6	46144396	46144437	-124661542	+	(GTGTGC)n	Simple_repeat	Simple_repeat	1	41	0	3
chr6	46645535	46645536	chunk0166_202_1	15.35686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	46644547	46647235	-124158744	-	L1MD1	LINE	L1	-486	5756	2904	3
chr6	46649377	46649378	chunk0166_203_1	6.35432	AR_DHT_Control	chr6	46649094	46649479	-124156500	-	MLT1F2	LTR	ERVL-MaLR	-167	393	1	3
chr6	46661525	46661526	chunk0166_206_1	19.8103	AR_DHT_Control	chr6	46661388	46661592	-124144387	+	L1ME4b	LINE	L1	513	728	-164	3
chr6	46757935	46757936	chunk0166_208_1	17.4407	AR_DHT_Control	chr6	46757757	46757973	-124048006	-	L2a	LINE	L2	-6	3420	3142	3
chr6	46763023	46763024	chunk0166_209_1	9.50609	AR_DHT_Control	chr6	46763011	46763079	-124042900	-	L2a	LINE	L2	-14	3412	3344	3
chr6	46912877	46912878	chunk0166_216_1	6.18182	AR_DHT_Control	chr6	46912677	46913127	-123892852	+	MER83	LTR	ERV1	1	448	0	3
chr6	46944550	46944551	chunk0166_221_1	40.81317	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	46944503	46944609	-123861370	-	MER5A	DNA	hAT-Charlie	-69	120	13	3
chr6	46950207	46950208	chunk0166_223_1	10.3855	AR_DHT_Control	chr6	46950088	46950487	-123855492	-	L3	LINE	CR1	-16	4083	3654	3
chr6	46983009	46983010	chunk0166_227_1	10.78112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	46982994	46983177	-123822802	+	L3	LINE	CR1	73	263	-3836	3
chr6	46988566	46988567	chunk0166_228_1	5.59693	AR_DHT_Control	chr6	46988359	46988578	-123817401	-	MIRb	SINE	MIR	-17	251	3	3
chr6	46995988	46995989	chunk0166_229_1	63.4491	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	46994649	46996217	-123809762	-	HAL1	LINE	L1	-254	2253	651	3
chr6	47131901	47131902	chunk0166_235_1	12.87124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	47131193	47131941	-123674038	+	L2a	LINE	L2	2569	3399	-27	3
chr6	47161319	47161320	chunk0166_238_1	21.30964	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	47161289	47161456	-123644523	+	MLT1I	LTR	ERVL-MaLR	213	393	-18	3
chr6	47270291	47270292	chunk0166_244_1	9.68961	AR_DHT_Control	chr6	47270102	47275669	-123530310	+	L1PA6	LINE	L1	590	6154	0	3
chr6	47485059	47485060	chunk0166_254_1	49.46342	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	47484862	47486018	-123319961	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	3
chr6	47535365	47535366	chunk0166_257_1	7.78938	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	47535350	47535431	-123270548	+	Charlie25	DNA	hAT-Charlie	96	177	-2347	3
chr6	47622241	47622242	chunk0166_258_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	47621873	47622862	-123183117	-	L1PB1	LINE	L1	-5614	998	5	3
chr6	47634647	47634648	chunk0166_259_1	112.4968	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	47634583	47634756	-123171223	+	MER110	LTR	ERV1	1	175	-316	3
chr6	47762393	47762394	chunk0166_266_1	18.49328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	47761716	47762510	-123043469	-	L1MC1	LINE	L1	-8	6325	5560	3
chr6	48086163	48086164	chunk0166_272_1	15.96046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	48085103	48086418	-122719561	-	Cheshire	DNA	hAT-Charlie	-1060	1360	1	3
chr6	48172892	48172893	chunk0166_274_1	7.36432	AR_DHT_Control	chr6	48172394	48173719	-122632260	+	Charlie1a	DNA	hAT-Charlie	2	1455	0	3
chr6	48400263	48400264	chunk0166_285_1	9.21264	AR_DHT_Control	chr6	48399330	48400629	-122405350	+	L2a	LINE	L2	1996	3426	0	3
chr6	48624780	48624781	chunk0166_288_1	15.47573	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	48624228	48624846	-122181133	+	LTR50	LTR	ERVL	6	793	-2	3
chr6	48934163	48934164	chunk0166_295_1	48.8229	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	48933913	48937446	-121868533	-	L1MA3	LINE	L1	-4064	3597	55	3
chr6	49523232	49523233	chunk0166_302_1	35.0592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	49523021	49523650	-121282329	-	MER68	LTR	ERVL	0	563	1	3
chr6	49703721	49703722	chunk0166_314_1	10.1791	AR_DHT_Control	chr6	49703665	49706067	-121099912	-	L1PB1	LINE	L1	-4371	2492	1	3
chr6	49753725	49753726	chunk0166_317_1	49.33825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	49752066	49753987	-121051992	-	L1PREC2	LINE	L1	-2406	5735	3833	3
chr6	49813813	49813814	chunk0166_321_1	20.2632	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	49813313	49813848	-120992131	-	MER67A	LTR	ERV1	0	543	5	3
chr6	49820638	49820639	chunk0166_323_1	16.4041	AR_DHT_Control	chr6	49820363	49820973	-120985006	+	L1PA10	LINE	L1	5544	6164	-4	3
chr6	49855558	49855559	chunk0166_325_1	15.3451	AR_DHT_Control	chr6	49855456	49855566	-120950413	+	L2b	LINE	L2	3000	3121	-254	3
chr6	49897214	49897215	chunk0166_326_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	49891585	49897710	-120908269	+	L1PB1	LINE	L1	255	6506	-361	3
chr6	49999417	49999418	chunk0166_331_1	37.8631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	49998774	49999996	-120805983	+	L1MCa	LINE	L1	3945	5232	-1089	3
chr6	50183266	50183267	chunk0166_334_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	50183078	50183584	-120622395	+	L1M5	LINE	L1	4840	5378	-768	3
chr6	50880693	50880694	chunk0166_337_1	6.48643	AR_DHT_Control	chr6	50880506	50880784	-119925195	-	L2c	LINE	L2	-185	3202	2941	3
chr6	51029823	51029824	chunk0166_342_1	7.36432	AR_DHT_Control	chr6	51029417	51029915	-119776064	-	L1ME4c	LINE	L1	-31	799	235	3
chr6	51064579	51064580	chunk0166_344_1	26.3583	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	51064468	51064585	-119741394	+	LTR81B	LTR	Gypsy	91	214	-1136	3
chr6	51083548	51083549	chunk0166_346_1	45.28774	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	51082478	51084079	-119721900	-	L1P3	LINE	L1	-2299	3847	2234	3
chr6	51237950	51237951	chunk0166_354_1	12.4153	AR_DHT_Control	chr6	51237903	51237957	-119568022	+	L2a	LINE	L2	3040	3095	-331	3
chr6	51539418	51539419	chunk0166_369_1	41.49122	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	51539352	51539519	-119266460	-	L3	LINE	CR1	-580	3519	3317	3
chr6	51593189	51593190	chunk0166_373_1	50.6269	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	51591869	51595045	-119210934	-	L1MA9	LINE	L1	-2635	4091	1186	3
chr6	51612644	51612645	chunk0166_376_1	11.8523	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	51612296	51612694	-119193285	+	L1M6	LINE	L1	1596	2038	-4458	3
chr6	51613874	51613875	chunk0166_378_1	82.1532	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	51613736	51614059	-119191920	-	Tigger3a	DNA	TcMar-Tigger	-4	344	8	3
chr6	51703073	51703074	chunk0166_382_1	98.504	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	51702954	51703158	-119102821	-	L2c	LINE	L2	-38	3349	3139	3
chr6	51705069	51705070	chunk0166_383_1	10.2957	AR_DHT_Control	chr6	51704989	51705146	-119100833	-	MamRep488	DNA	hAT-Tip100	-1	218	49	3
chr6	51976509	51976510	chunk0166_400_1	81.0623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	51975983	51976654	-118829325	+	L1MB3	LINE	L1	5476	6176	-7	3
chr6	52013317	52013318	chunk0166_403_1	213.2882	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	52012793	52013370	-118792609	-	L3	LINE	CR1	-1183	2916	2267	3
chr6	52115968	52115969	chunk0166_409_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	52115846	52116057	-118689922	+	L1MA9	LINE	L1	6047	6282	-30	3
chr6	52332243	52332244	chunk0166_411_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	52332220	52332450	-118473529	-	L2c	LINE	L2	-1230	2189	1933	3
chr6	52475609	52475610	chunk0166_413_1	88.4843	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	52475533	52475722	-118330257	+	Charlie7a	DNA	hAT-Charlie	7	180	-92	3
chr6	52552468	52552469	chunk0166_418_1	4.81216	AR_DHT_Control	chr6	52552445	52552591	-118253388	+	MIR3	SINE	MIR	16	177	-31	3
chr6	52616155	52616156	chunk0166_423_1	37.0228	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	52616062	52616246	-118189733	-	MER58A	DNA	hAT-Charlie	0	224	6	3
chr6	52788155	52788156	chunk0166_431_1	54.5046	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	52787950	52788368	-118017611	+	MER65A	LTR	ERV1	1	443	-2	3
chr6	52876533	52876534	chunk0166_434_1	15.09129	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	52876246	52876654	-117929325	+	MER89-int	LTR	ERV1	140	556	-6245	3
chr6	52946661	52946662	chunk0166_436_1	31.7486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	52946314	52946727	-117859252	-	MER83	LTR	ERV1	0	448	1	3
chr6	53056487	53056488	chunk0166_445_1	37.062	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	53056317	53056532	-117749447	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr6	53086591	53086592	chunk0166_446_1	22.13091	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	53086169	53086785	-117719194	-	MER101-int	LTR	ERV1	-3108	3531	2891	3
chr6	53279516	53279517	chunk0166_454_1	9.11062	AR_DHT_Control	chr6	53279274	53279588	-117526391	+	L2b	LINE	L2	3054	3373	-2	3
chr6	53356871	53356872	chunk0166_461_1	28.92912	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	53356804	53356969	-117449010	+	L2c	LINE	L2	3197	3377	-10	3
chr6	53358665	53358666	chunk0166_464_1	29.86692	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	53358556	53358786	-117447193	+	L2a	LINE	L2	3100	3353	-73	3
chr6	53394309	53394310	chunk0167_2_1	92.3816	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	53394302	53394418	-117411561	-	L1ME4a	LINE	L1	-139	5985	5840	3
chr6	53469394	53469395	chunk0167_10_1	117.89154	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	53469147	53474826	-117331153	-	L1MA3	LINE	L1	-1828	5737	319	3
chr6	53695774	53695775	chunk0167_20_1	227.8143	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	53695688	53695837	-117110142	+	L2a	LINE	L2	3265	3426	0	3
chr6	53746698	53746699	chunk0167_24_1	12.9759	AR_DHT_Control	chr6	53746677	53746757	-117059222	-	MIRb	SINE	MIR	-135	133	46	3
chr6	53811355	53811356	chunk0167_27_1	53.2453	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	53811216	53811369	-116994610	+	MamRTE1	LINE	RTE-BovB	72	223	-3589	3
chr6	53943694	53943695	chunk0167_33_1	60.3376	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	53942792	53943876	-116862103	+	LTR78	LTR	ERV1	90	1291	-13	3
chr6	55487220	55487221	chunk0167_45_1	9.83323	AR_DHT_Control	chr6	55487195	55487275	-115318704	-	L1M4	LINE	L1	-1949	4197	4114	3
chr6	55518425	55518426	chunk0167_48_1	7.20337	AR_DHT_Control	chr6	55518380	55518959	-115287020	+	MLT1G3	LTR	ERVL-MaLR	1	595	0	3
chr6	56025091	56025092	chunk0167_60_1	20.72044	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	56024930	56025389	-114780590	+	MLT1J2	LTR	ERVL-MaLR	3	428	-20	3
chr6	56156585	56156586	chunk0167_64_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	56156277	56156840	-114649139	+	MER67D	LTR	ERV1	4	514	0	3
chr6	56312214	56312215	chunk0167_68_1	52.0273	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	56312200	56312584	-114493395	-	L2c	LINE	L2	-631	2788	2389	3
chr6	56399779	56399780	chunk0167_71_1	23.10511	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	56399558	56400140	-114405839	+	LTR22	LTR	ERVK	1	571	0	3
chr6	56550452	56550453	chunk0167_81_1	8.36569	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	56550451	56550488	-114255491	-	MIRc	SINE	MIR	-19	249	213	3
chr6	56685201	56685202	chunk0167_87_1	17.28318	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	56685140	56685494	-114120485	+	L1PA17	LINE	L1	5143	5485	-681	3
chr6	56855186	56855187	chunk0167_89_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	56855167	56856014	-113949965	-	MER6	DNA	TcMar-Tigger	0	865	2	3
chr6	56897894	56897895	chunk0167_90_1	11.6341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	56897669	56898096	-113907883	+	LTR33	LTR	ERVL	24	496	-19	3
chr6	56991829	56991830	chunk0167_93_1	20.92514	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	56991680	56991832	-113814147	-	L1ME3A	LINE	L1	-8	6165	5993	3
chr6	56999601	56999602	chunk0167_94_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	56998981	56999851	-113806128	+	L1PA15-16	LINE	L1	705	1548	-5305	3
chr6	57120833	57120834	chunk0167_97_1	53.5723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	57119938	57121542	-113684437	-	L1MC1	LINE	L1	-189	6319	4658	3
chr6	57127927	57127928	chunk0167_102_1	187.7102	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	57127902	57128083	-113677896	+	MER58A	DNA	hAT-Charlie	37	223	-1	3
chr6	57223811	57223812	chunk0167_107_1	38.4663	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	57223639	57224155	-113581824	+	L1MB3	LINE	L1	5314	5824	-359	3
chr6	57549320	57549321	chunk0167_116_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	57549219	57549410	-113256569	-	MIRb	SINE	MIR	-39	229	18	3
chr6	57767650	57767651	chunk0167_117_1	13.5952	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	57767556	57768594	-113037385	+	L1ME3B	LINE	L1	3871	4951	-1195	3
chr6	60819070	60819071	chunk0167_119_1	15.31318	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	60817984	60819245	-109986734	-	LTR49-int	LTR	ERV1	-165	6166	4983	3
chr6	60870088	60870089	chunk0167_121_1	8.71496	AR_DHT_Control	chr6	60869887	60870164	-109935815	-	L2a	LINE	L2	-160	3266	2985	3
chr6	60870948	60870949	chunk0167_122_1	259.4121	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	60870724	60870971	-109935008	-	L4_A_Mam	LINE	RTE-X	-1117	3873	3577	3
chr6	61793105	61793106	chunk0167_127_1	152.5032	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	61792766	61793278	-109012701	+	L1M5	LINE	L1	4500	5026	-1120	3
chr6	62050909	62050910	chunk0167_132_1	23.8373	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	62050610	62051252	-108754727	+	L1ME2	LINE	L1	5451	6147	-17	3
chr6	62052155	62052156	chunk0167_134_1	15.72906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	62051537	62052540	-108753439	+	L1MA9	LINE	L1	5037	6075	-237	3
chr6	62269844	62269845	chunk0167_139_1	62.2424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	62268997	62270073	-108535906	+	L1ME2	LINE	L1	4882	6000	-164	3
chr6	62332970	62332971	chunk0167_140_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	62332820	62333253	-108472726	-	L1MB8	LINE	L1	-713	5465	5015	3
chr6	62400859	62400860	chunk0167_142_1	37.29352	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	62397980	62401293	-108404686	-	L1MA3	LINE	L1	-2824	4741	1323	3
chr6	62429963	62429964	chunk0167_145_1	147.0242	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	62429915	62429968	-108376011	+	OldhAT1	DNA	hAT-Ac	2311	2364	-484	3
chr6	62523789	62523790	chunk0167_151_1	17.65308	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	62523736	62523847	-108282132	+	L2a	LINE	L2	3298	3416	-10	3
chr6	62612591	62612592	chunk0167_153_1	8.27376	AR_DHT_Control	chr6	62611817	62613170	-108192809	-	MER50-int	LTR	ERV1	-5755	1450	124	3
chr6	62620729	62620730	chunk0167_154_1	14.7503	AR_DHT_Control	chr6	62620437	62621185	-108184794	+	L1ME1	LINE	L1	5382	6178	-1	3
chr6	62663749	62663750	chunk0167_158_1	15.01573	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	62663552	62663750	-108142229	+	Tigger14a	DNA	TcMar-Tigger	1	208	-116	3
chr6	63088732	63088733	chunk0167_165_1	60.1499	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	63088011	63088808	-107717171	+	L1M7	LINE	L1	855	1683	-4535	3
chr6	63111863	63111864	chunk0167_167_1	13.5125	AR_DHT_Control	chr6	63109178	63112002	-107693977	-	L1MA3	LINE	L1	-4092	3473	670	3
chr6	63141042	63141043	chunk0167_168_1	57.3262	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	63139297	63141822	-107664157	+	L1M1	LINE	L1	17	2585	-4980	3
chr6	63292654	63292655	chunk0167_170_1	7.36432	AR_DHT_Control	chr6	63292353	63292937	-107513042	+	MER77B	LTR	ERVL	1	677	-23	3
chr6	63448181	63448182	chunk0167_171_1	12.1886	AR_DHT_Control	chr6	63448033	63448194	-107357785	+	AmnSINE1	SINE	5S-Deu-L2	407	571	-4	3
chr6	63671303	63671304	chunk0167_178_1	9.21264	AR_DHT_Control	chr6	63671244	63671346	-107134633	-	L2a	LINE	L2	-5	3421	3314	3
chr6	63769061	63769062	chunk0167_179_1	11.1716	AR_DHT_Control	chr6	63766893	63769235	-107036744	+	L1PA16	LINE	L1	3800	6161	-5	3
chr6	64067749	64067750	chunk0167_185_1	40.6244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	64067523	64067783	-106738196	+	MER44A	DNA	TcMar-Tigger	62	339	0	3
chr6	64254775	64254776	chunk0167_189_1	8.27376	AR_DHT_Control	chr6	64254353	64254808	-106551171	+	LTR33	LTR	ERVL	13	515	0	3
chr6	64268155	64268156	chunk0167_190_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	64268002	64268359	-106537620	+	L1ME4b	LINE	L1	377	750	-142	3
chr6	64465443	64465444	chunk0167_194_1	22.43447	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	64464959	64466870	-106339109	+	L1MA8	LINE	L1	4354	6268	-23	3
chr6	64932687	64932688	chunk0167_204_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	64931956	64933277	-105872702	+	L1MB7	LINE	L1	17	1361	-6156	3
chr6	65277863	65277864	chunk0167_208_1	129.964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	65277672	65277880	-105528099	+	ERVL-B4-int	LTR	ERVL	5541	5757	0	3
chr6	65344832	65344833	chunk0167_209_1	12.8929	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	65344778	65345142	-105460837	+	LTR80A	LTR	ERVL	1	392	-191	3
chr6	66084884	66084885	chunk0167_212_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	66083893	66085639	-104720340	-	L1PA15	LINE	L1	-4739	3421	1727	3
chr6	66190129	66190130	chunk0167_213_1	14.41592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	66189926	66190349	-104615630	-	MLT1B	LTR	ERVL-MaLR	0	390	1	3
chr6	66333616	66333617	chunk0167_217_1	13.9612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	66333387	66333684	-104472295	+	L1ME1	LINE	L1	5412	5704	-475	3
chr6	66478942	66478943	chunk0167_218_1	12.1886	AR_DHT_Control	chr6	66478697	66479063	-104326916	-	LTR18A	LTR	ERVL	0	357	1	3
chr6	66507079	66507080	chunk0167_219_1	44.7623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	66506901	66507186	-104298793	+	L2b	LINE	L2	3131	3387	0	3
chr6	66647232	66647233	chunk0167_221_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	66644662	66648095	-104157884	-	L1M3e	LINE	L1	-3690	3872	501	3
chr6	67082321	67082322	chunk0167_225_1	6.73207	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67082298	67082472	-103723507	+	MIR	SINE	MIR	84	262	0	3
chr6	67143949	67143950	chunk0167_227_1	34.4126	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67143578	67145450	-103660529	-	L1MD1	LINE	L1	-8	6625	4737	3
chr6	67312024	67312025	chunk0167_230_1	15.7875	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67309746	67313314	-103492665	-	L1PB3	LINE	L1	-1279	5583	1931	3
chr6	67350951	67350952	chunk0167_231_1	119.38433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	67350809	67350967	-103455012	+	L2b	LINE	L2	3241	3424	-2	3
chr6	67352313	67352314	chunk0167_234_1	15.74854	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67352297	67352341	-103453638	+	(GTTT)n	Simple_repeat	Simple_repeat	1	46	0	3
chr6	67389580	67389581	chunk0167_235_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67389538	67390064	-103415915	+	Tigger6b	DNA	TcMar-Tigger	1083	1590	-7	3
chr6	67551842	67551843	chunk0167_237_1	8.53045	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67551566	67552374	-103253605	-	L1M1	LINE	L1	-4280	3285	2446	3
chr6	67592177	67592178	chunk0167_241_1	58.8757	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	67591678	67593237	-103212742	-	L1M4b	LINE	L1	-5211	1656	11	3
chr6	67863589	67863590	chunk0167_247_1	21.95266	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	67862986	67864449	-102941530	+	LTR49-int	LTR	ERV1	4773	6328	-3	3
chr6	68115598	68115599	chunk0167_249_1	39.8721	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	68115576	68115800	-102690179	+	MER20	DNA	hAT-Charlie	1	219	0	3
chr6	68145132	68145133	chunk0167_251_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	68143325	68146088	-102659891	-	L1M1	LINE	L1	-4679	2886	107	3
chr6	69178506	69178507	chunk0167_253_1	11.3289	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	69177645	69181298	-101624681	-	L1PA16	LINE	L1	-3220	3629	1	3
chr6	69620809	69620810	chunk0167_262_1	23.21282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	69620776	69620822	-101185157	+	(GTTTG)n	Simple_repeat	Simple_repeat	1	46	0	3
chr6	69792643	69792644	chunk0167_267_1	31.8486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	69792588	69792697	-101013282	+	Charlie1b	DNA	hAT-Charlie	280	399	-124	3
chr6	70291444	70291445	chunk0167_273_1	9.01771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	70291273	70291621	-100514358	+	L2c	LINE	L2	3033	3385	-2	3
chr6	70392713	70392714	chunk0167_276_1	41.4679	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	70392578	70392837	-100413142	+	HAL1b	LINE	L1	902	1168	-1253	3
chr6	70450548	70450549	chunk0167_282_1	19.4478	AR_DHT_Control	chr6	70449139	70450716	-100355263	-	L1MA7	LINE	L1	-5	6286	4706	3
chr6	70664980	70664981	chunk0167_288_1	129.8838	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	70664927	70665139	-100140840	+	L2c	LINE	L2	3072	3297	-90	3
chr6	70710158	70710159	chunk0167_291_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	70709937	70710210	-100095769	-	Tigger3b	DNA	TcMar-Tigger	0	1231	947	3
chr6	70816615	70816616	chunk0167_292_1	55.0343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	70816593	70816683	-99989296	-	L2a	LINE	L2	0	3426	3320	3
chr6	71139695	71139696	chunk0167_296_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	71138558	71146364	-99659615	+	L1PA2	LINE	L1	600	8149	-1	3
chr6	71253919	71253920	chunk0167_298_1	13.2288	AR_DHT_Control	chr6	71253588	71254089	-99551890	-	MER39	LTR	ERV1	0	707	1	3
chr6	71411862	71411863	chunk0167_305_1	8.13469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	71411846	71411893	-99394086	+	(TCTTAT)n	Simple_repeat	Simple_repeat	1	49	0	3
chr6	72077325	72077326	chunk0167_315_1	32.0411	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72076754	72077449	-98728530	+	L2a	LINE	L2	2631	3426	0	3
chr6	72194541	72194542	chunk0167_319_1	46.6206	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72194491	72194600	-98611379	-	L2a	LINE	L2	-95	3331	3217	3
chr6	72222132	72222133	chunk0167_320_1	8.95381	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72222108	72222178	-98583801	+	(TAATTT)n	Simple_repeat	Simple_repeat	1	72	0	3
chr6	72395392	72395393	chunk0167_329_1	11.8978	AR_DHT_Control	chr6	72394928	72395417	-98410562	+	L1MEi	LINE	L1	886	1345	-867	3
chr6	72501065	72501066	chunk0167_333_1	154.3601	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72501052	72502030	-98303949	+	L1MC4	LINE	L1	6762	7837	-205	3
chr6	72533965	72533966	chunk0167_335_1	31.02785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72533840	72534079	-98271900	+	L2c	LINE	L2	3131	3381	-6	3
chr6	72564552	72564553	chunk0167_336_1	16.78552	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	72564382	72564642	-98241337	+	MIRb	SINE	MIR	10	266	-2	3
chr6	72805920	72805921	chunk0167_345_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72804076	72805989	-97999990	-	L1MA3	LINE	L1	-5	6300	4326	3
chr6	72844293	72844294	chunk0167_348_1	12.0277	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	72844272	72844329	-97961650	+	MIRc	SINE	MIR	206	262	-6	3
chr6	73421889	73421890	chunk0167_365_1	24.8629	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	73421610	73422177	-97383802	+	MER77B	LTR	ERVL	1	689	-11	3
chr6	73534955	73534956	chunk0167_369_1	9.21264	AR_DHT_Control	chr6	73534686	73535120	-97270859	+	L1ME1	LINE	L1	5427	5873	-306	3
chr6	73650785	73650786	chunk0167_370_1	71.765	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	73650781	73650869	-97155110	+	L2a	LINE	L2	3301	3384	-42	3
chr6	73753185	73753186	chunk0167_373_1	26.6314	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	73753049	73753272	-97052707	+	MER58A	DNA	hAT-Charlie	2	224	0	3
chr6	73774636	73774637	chunk0167_377_1	58.9688	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	73774396	73774938	-97031041	-	L1MEh	LINE	L1	-1670	565	19	3
chr6	73883433	73883434	chunk0167_380_1	9.31879	AR_DHT_Control	chr6	73883179	73883487	-96922492	+	L2a	LINE	L2	3096	3425	-1	3
chr6	73893889	73893890	chunk0167_382_1	17.30593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	73893710	73894015	-96911964	-	L1MA6	LINE	L1	-3222	4340	4037	3
chr6	73929734	73929735	chunk0167_384_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	73928949	73929937	-96876042	-	L1M2a	LINE	L1	-6190	978	4	3
chr6	74466169	74466170	chunk0167_385_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	74465079	74466329	-96339650	-	L1PA13	LINE	L1	-4311	2474	1210	3
chr6	74698633	74698634	chunk0167_389_1	11.8334	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	74698612	74698741	-96107238	+	L2b	LINE	L2	3300	3426	0	3
chr6	74970245	74970246	chunk0167_397_1	18.701	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	74970120	74970546	-95835433	+	MER110	LTR	ERV1	80	484	-7	3
chr6	75212192	75212193	chunk0167_403_1	49.96858	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	75211828	75212327	-95593652	-	LTR40a	LTR	ERVL	0	519	1	3
chr6	75262994	75262995	chunk0167_405_1	8.27376	AR_DHT_Control	chr6	75262853	75263497	-95542482	-	L2c	LINE	L2	-3	3384	2686	3
chr6	75269614	75269615	chunk0167_406_1	15.706	AR_DHT_Control	chr6	75268990	75269696	-95536283	-	L1MC1	LINE	L1	0	6333	5601	3
chr6	75351641	75351642	chunk0167_410_1	41.67097	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	75351524	75351803	-95454176	+	Tigger3a	DNA	TcMar-Tigger	59	348	0	3
chr6	75386332	75386333	chunk0167_411_1	5.6425	AR_DHT_Control	chr6	75385947	75386790	-95419189	+	MamGypsy2-I	LTR	Gypsy	3169	4104	-62	3
chr6	75436940	75436941	chunk0167_417_1	54.2593	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	75436793	75437002	-95368977	-	MER63A	DNA	hAT-Blackjack	-1	209	1	3
chr6	75619623	75619624	chunk0167_426_1	30.42307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	75619474	75619809	-95186170	-	L1MC3	LINE	L1	-1997	5788	5467	3
chr6	75747429	75747430	chunk0167_431_1	122.00431	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	75747386	75747735	-95058244	-	L2c	LINE	L2	-486	2933	2566	3
chr6	75815371	75815372	chunk0167_433_1	13.9547	AR_DHT_Control	chr6	75815027	75815531	-94990448	-	L2	LINE	L2	-585	2834	2268	3
chr6	75849579	75849580	chunk0167_434_1	21.05254	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	75849516	75850224	-94955755	-	LTR30	LTR	ERV1	0	722	1	3
chr6	75874488	75874489	chunk0167_442_1	6.79294	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	75874240	75875125	-94930854	+	L2b	LINE	L2	1202	2271	-1148	3
chr6	75879343	75879344	chunk0167_443_1	9.78454	AR_DHT_Control	chr6	75879244	75879554	-94926425	-	AluJb	SINE	Alu	-11	301	3	3
chr6	75880407	75880408	chunk0167_444_1	8.97818	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	75880376	75880602	-94925377	-	MER30	DNA	hAT-Charlie	-4	226	1	3
chr6	76276150	76276151	chunk0167_451_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	76274932	76276612	-94529367	-	L1PA15-16	LINE	L1	-4335	2518	790	3
chr6	76418845	76418846	chunk0167_456_1	20.12972	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	76418812	76418937	-94387042	-	MER5B	DNA	hAT-Charlie	-67	111	5	3
chr6	76547959	76547960	chunk0168_2_1	22.2859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	76547711	76548450	-94257529	-	L1MC2	LINE	L1	-5399	1109	441	3
chr6	76616895	76616896	chunk0168_4_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	76616855	76618162	-94187817	-	L2a	LINE	L2	0	3426	1963	3
chr6	76819443	76819444	chunk0168_7_1	24.0094	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	76818901	76820197	-93985782	-	L1ME3B	LINE	L1	-110	6132	4832	3
chr6	76847791	76847792	chunk0168_8_1	23.2968	AR_DHT_Control	chr6	76844485	76848874	-93957105	-	L1PA7	LINE	L1	-2	6467	2086	3
chr6	76866265	76866266	chunk0168_17_1	83.6208	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	76865997	76866483	-93939496	-	LTR80B	LTR	ERVL	-66	518	19	3
chr6	76941586	76941587	chunk0168_18_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	76941107	76945750	-93860229	+	L1MA1	LINE	L1	14	4677	-2885	3
chr6	76980789	76980790	chunk0168_20_1	16.63243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	76980731	76980958	-93825021	+	L1PA7	LINE	L1	5928	6154	0	3
chr6	77012477	77012478	chunk0168_22_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	77010947	77012486	-93793493	+	MER52A	LTR	ERV1	1	1755	0	3
chr6	77298354	77298355	chunk0168_25_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	77297705	77298531	-93507448	-	Charlie1a	DNA	hAT-Charlie	-585	870	66	3
chr6	77376751	77376752	chunk0168_26_1	9.21264	AR_DHT_Control	chr6	77376634	77376865	-93429114	+	MER58A	DNA	hAT-Charlie	2	224	0	3
chr6	77521431	77521432	chunk0168_27_1	8.27376	AR_DHT_Control	chr6	77518215	77524498	-93281481	+	L1PA7	LINE	L1	6	6466	-3	3
chr6	77653953	77653954	chunk0168_29_1	15.27379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	77653942	77654175	-93151804	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr6	77837293	77837294	chunk0168_31_1	11.957	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	77837273	77837531	-92968448	+	L1MC5	LINE	L1	8643	8908	-396	3
chr6	78061789	78061790	chunk0168_32_1	102.04954	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	78060696	78061869	-92744110	+	ERVL47-int	LTR	ERVL	1109	2313	-2933	3
chr6	78066760	78066761	chunk0168_33_1	7.78938	AR_DHT_Control	chr6	78065101	78067260	-92738719	-	L1MC3	LINE	L1	-476	7309	5085	3
chr6	78248351	78248352	chunk0168_36_1	23.75894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	78248248	78249464	-92556515	-	L1MCc	LINE	L1	-5184	1239	17	3
chr6	78512596	78512597	chunk0168_45_1	27.62689	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	78512560	78512613	-92293366	+	L2a	LINE	L2	3363	3418	-8	3
chr6	78639963	78639964	chunk0168_49_1	10.2531	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	78639890	78640017	-92165962	-	MIR	SINE	MIR	-2	260	120	3
chr6	78673603	78673604	chunk0168_51_1	30.9641	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	78673388	78673720	-92132259	-	L1PB4	LINE	L1	-5	6151	5825	3
chr6	78676697	78676698	chunk0168_52_1	129.5735	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	78675973	78678869	-92127110	+	L1PA6	LINE	L1	177	3020	-3299	3
chr6	78875783	78875784	chunk0168_56_1	168.9604	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	78874801	78875877	-91930102	+	L1PA17	LINE	L1	5050	6158	-8	3
chr6	78900600	78900601	chunk0168_58_1	15.2809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	78900538	78900664	-91905315	+	L2b	LINE	L2	3241	3364	-11	3
chr6	79113946	79113947	chunk0168_59_1	8.27376	AR_DHT_Control	chr6	79113757	79114314	-91691665	+	HAL1	LINE	L1	2	569	-1938	3
chr6	79121127	79121128	chunk0168_60_1	5.6425	AR_DHT_Control	chr6	79120194	79121499	-91684480	+	L1ME1	LINE	L1	2954	4318	-2623	3
chr6	79221919	79221920	chunk0168_62_1	6.48643	AR_DHT_Control	chr6	79221906	79221939	-91584040	+	(GTACAT)n	Simple_repeat	Simple_repeat	1	33	0	3
chr6	79325847	79325848	chunk0168_65_1	57.5833	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	79325778	79325914	-91480065	-	L1MD	LINE	L1	-3728	2418	2282	3
chr6	79461360	79461361	chunk0168_71_1	14.2024	AR_DHT_Control	chr6	79461089	79461651	-91344328	-	MER77B	LTR	ERVL	-17	683	2	3
chr6	79663469	79663470	chunk0168_75_1	25.64004	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	79658145	79664304	-91141675	-	L1PA6	LINE	L1	0	6154	1	3
chr6	79819315	79819316	chunk0168_81_1	213.6735	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	79819118	79819747	-90986232	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	3
chr6	79866940	79866941	chunk0168_84_1	11.3974	AR_DHT_Control	chr6	79866516	79867213	-90938766	+	L1ME4b	LINE	L1	4	744	-148	3
chr6	79878427	79878428	chunk0168_87_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	79878034	79879562	-90926417	+	L1MA2	LINE	L1	21	1752	-5813	3
chr6	80016009	80016010	chunk0168_94_1	159.9703	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	80015777	80016642	-90789337	-	L1ME3	LINE	L1	-14	6159	5232	3
chr6	80084902	80084903	chunk0168_98_1	20.37155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	80084803	80085001	-90720978	+	MER58A	DNA	hAT-Charlie	10	218	-6	3
chr6	80090471	80090472	chunk0168_99_1	21.24682	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	80090429	80090545	-90715434	-	MIR3	SINE	MIR	0	208	95	3
chr6	80172020	80172021	chunk0168_101_1	5.6425	AR_DHT_Control	chr6	80171971	80172239	-90633740	-	L1ME2z	LINE	L1	-388	6056	5783	3
chr6	80188337	80188338	chunk0168_104_1	11.1716	AR_DHT_Control	chr6	80187517	80188400	-90617579	+	L1PA15	LINE	L1	5180	6037	-128	3
chr6	80229129	80229130	chunk0168_106_1	19.77472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	80229075	80229518	-90576461	-	L2a	LINE	L2	-5	3421	2929	3
chr6	80256206	80256207	chunk0168_107_1	22.5952	AR_DHT_Control	chr6	80256202	80256545	-90549434	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr6	80893245	80893246	chunk0168_111_1	29.3526	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	80892902	80893473	-89912506	-	L1M5	LINE	L1	-984	5162	4573	3
chr6	81898986	81898987	chunk0168_116_1	7.72121	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	81898603	81899268	-88906711	-	Charlie1a	DNA	hAT-Charlie	0	1455	658	3
chr6	82030449	82030450	chunk0168_123_1	154.0062	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	82030304	82030720	-88775259	-	MLT1B	LTR	ERVL-MaLR	0	390	1	3
chr6	82178995	82178996	chunk0168_127_1	28.6059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	82178523	82179491	-88626488	-	L2b	LINE	L2	0	3387	2324	3
chr6	82263410	82263411	chunk0168_129_1	9.63462	AR_DHT_Control	chr6	82263362	82263420	-88542559	+	(CATA)n	Simple_repeat	Simple_repeat	1	61	0	3
chr6	82739256	82739257	chunk0168_130_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	82739227	82739310	-88066669	+	LTR9	LTR	ERV1	443	526	-86	3
chr6	82902426	82902427	chunk0168_136_1	36.1256	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	82902144	82902753	-87903226	+	L1MD2	LINE	L1	5490	6140	-219	3
chr6	82958882	82958883	chunk0168_138_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	82958678	82959144	-87846835	-	MER34D	LTR	ERV1	0	579	103	3
chr6	83274809	83274810	chunk0168_156_1	7.36432	AR_DHT_Control	chr6	83274754	83275051	-87530928	+	Tigger6b	DNA	TcMar-Tigger	147	487	-1110	3
chr6	83290372	83290373	chunk0168_157_1	7.36432	AR_DHT_Control	chr6	83287157	83293277	-87512702	-	L1PA7	LINE	L1	-3	6151	5	3
chr6	83870880	83870881	chunk0168_168_1	18.1063	AR_DHT_Control	chr6	83870761	83870892	-86935087	+	Tigger17c	DNA	TcMar-Tigger	60	191	-997	3
chr6	83883362	83883363	chunk0168_170_1	14.03547	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	83882997	83884137	-86921842	+	L1MEf	LINE	L1	858	2179	-4063	3
chr6	83976575	83976576	chunk0168_173_1	14.2911	AR_DHT_Control	chr6	83976445	83976821	-86829158	-	MER4-int	LTR	ERV1	-4060	2271	1884	3
chr6	84484425	84484426	chunk0168_180_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	84478636	84485210	-86320769	+	L1PB3	LINE	L1	252	6870	0	3
chr6	84917798	84917799	chunk0168_183_1	9.21264	AR_DHT_Control	chr6	84917732	84917955	-85888024	+	MER58A	DNA	hAT-Charlie	3	224	0	3
chr6	85409982	85409983	chunk0168_190_1	8.86683	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	85409697	85410002	-85395977	-	L1MD2	LINE	L1	-461	5898	5571	3
chr6	85498887	85498888	chunk0168_195_1	4.33257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	85498587	85498919	-85307060	-	MLT1A0	LTR	ERVL-MaLR	-16	349	4	3
chr6	85500412	85500413	chunk0168_196_1	5.40815	AR_DHT_Control	chr6	85500328	85500708	-85305271	+	MSTA	LTR	ERVL-MaLR	1	384	-44	3
chr6	85502616	85502617	chunk0168_197_1	11.8978	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	85502446	85502917	-85303062	-	Tigger3b	DNA	TcMar-Tigger	-691	540	2	3
chr6	85517330	85517331	chunk0168_198_1	8.27376	AR_DHT_Control	chr6	85517286	85517386	-85288593	+	L2c	LINE	L2	3279	3387	0	3
chr6	85579816	85579817	chunk0168_200_1	35.22769	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	85579340	85582387	-85223592	+	L1M1	LINE	L1	12	3016	-4549	3
chr6	85580747	85580748	chunk0168_201_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	85579340	85582387	-85223592	+	L1M1	LINE	L1	12	3016	-4549	3
chr6	85680221	85680222	chunk0168_205_1	14.37	AR_DHT_Control	chr6	85680132	85680230	-85125749	+	FLAM_C	SINE	Alu	1	76	-57	3
chr6	85787469	85787470	chunk0168_206_1	14.7289	AR_DHT_Control	chr6	85782835	85788228	-85017751	-	L1PA6	LINE	L1	-743	5576	187	3
chr6	85826773	85826774	chunk0168_209_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	85825959	85827813	-84978166	+	L1M2	LINE	L1	722	2344	-5222	3
chr6	85908341	85908342	chunk0168_212_1	75.8496	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	85903035	85909164	-84896815	-	L1PA7	LINE	L1	-5	6149	4	3
chr6	86234077	86234078	chunk0168_219_1	6.04605	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	86232016	86234154	-84571825	-	L1MA2	LINE	L1	-4851	2714	510	3
chr6	86326323	86326324	chunk0168_221_1	51.3032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	86326316	86326845	-84479134	+	L1MA2	LINE	L1	7208	7723	0	3
chr6	86568460	86568461	chunk0168_226_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	86567793	86568717	-84237262	-	LTR78	LTR	ERV1	-137	1167	196	3
chr6	87196504	87196505	chunk0168_228_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	87196321	87196741	-83609238	-	Tigger6a	DNA	TcMar-Tigger	-650	433	1	3
chr6	87558789	87558790	chunk0168_233_1	22.4904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	87558520	87559297	-83246682	+	Tigger3b	DNA	TcMar-Tigger	1	775	-456	3
chr6	87806959	87806960	chunk0168_239_1	17.25238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	87806882	87806977	-82999002	+	L2a	LINE	L2	3282	3426	0	3
chr6	88797082	88797083	chunk0168_250_1	32.4185	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	88797002	88797124	-82008855	+	L1M5	LINE	L1	4532	4655	-1491	3
chr6	88973216	88973217	chunk0168_253_1	27.1858	AR_DHT_Control	chr6	88973165	88973627	-81832352	+	MER67C	LTR	ERV1	225	711	0	3
chr6	90843061	90843062	chunk0168_286_1	23.84916	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	90843060	90843114	-79962865	-	L2a	LINE	L2	-12	3414	3360	3
chr6	91373413	91373414	chunk0168_297_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	91371398	91374669	-79431310	-	L1PA7	LINE	L1	-3	6466	3023	3
chr6	91506730	91506731	chunk0168_303_1	42.665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	91505181	91507010	-79298969	-	L1ME3	LINE	L1	-3862	2284	312	3
chr6	91704595	91704596	chunk0168_306_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	91703986	91705486	-79100493	+	L1PA16	LINE	L1	4651	6157	-9	3
chr6	92117859	92117860	chunk0168_312_1	13.60274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	92117837	92117868	-78688111	+	(AAAC)n	Simple_repeat	Simple_repeat	1	32	0	3
chr6	92421561	92421562	chunk0168_320_1	9.39801	AR_DHT_Control	chr6	92420759	92424537	-78381442	+	L1PA5	LINE	L1	1	3779	-2367	3
chr6	92422815	92422816	chunk0168_321_1	39.2955	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	92420759	92424537	-78381442	+	L1PA5	LINE	L1	1	3779	-2367	3
chr6	92449277	92449278	chunk0168_325_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	92449015	92449893	-78356086	+	L1M2	LINE	L1	26	816	-6047	3
chr6	92559171	92559172	chunk0168_326_1	43.49554	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	92558794	92559619	-78246360	+	Tigger2	DNA	TcMar-Tigger	2	889	-1829	3
chr6	92681553	92681554	chunk0168_331_1	66.60602	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	92681365	92681934	-78124045	-	L1ME3C	LINE	L1	-138	5985	5377	3
chr6	92706784	92706785	chunk0168_335_1	64.8374	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	92706558	92706939	-78099040	-	L1MB8	LINE	L1	-1	6177	5800	3
chr6	92865300	92865301	chunk0168_340_1	103.4523	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	92864560	92865350	-77940629	-	L1MCa	LINE	L1	-5714	794	1	3
chr6	93037189	93037190	chunk0168_345_1	17.03329	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	93035625	93037824	-77768155	-	L1PA15-16	LINE	L1	-3919	2934	716	3
chr6	93054340	93054341	chunk0168_347_1	7.36432	AR_DHT_Control	chr6	93053737	93055926	-77750053	-	L1PB4	LINE	L1	-733	5423	3257	3
chr6	93207497	93207498	chunk0168_355_1	44.6891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	93207412	93207594	-77598385	+	L1M2	LINE	L1	4773	4938	-1205	3
chr6	93472220	93472221	chunk0168_366_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	93472219	93472283	-77333696	-	MIRb	SINE	MIR	-5	263	203	3
chr6	93478159	93478160	chunk0168_367_1	34.4713	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	93478126	93478264	-77327715	+	MIR3	SINE	MIR	54	207	-1	3
chr6	93715965	93715966	chunk0168_369_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	93714103	93716878	-77089101	-	L1MA9	LINE	L1	-4323	2845	13	3
chr6	93731520	93731521	chunk0168_372_1	9.21264	AR_DHT_Control	chr6	93731365	93731989	-77073990	-	Tigger3	DNA	TcMar-Tigger	-5	3024	2408	3
chr6	93877965	93877966	chunk0168_373_1	14.3328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	93877437	93878319	-76927660	-	L1ME3C	LINE	L1	-28	6214	5286	3
chr6	93919587	93919588	chunk0168_375_1	7.97574	AR_DHT_Control	chr6	93919338	93919896	-76886083	+	MER119	DNA	hAT-Charlie	1	583	0	3
chr6	93945845	93945846	chunk0168_380_1	24.8742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	93945685	93945874	-76860105	+	MER5B	DNA	hAT-Charlie	1	178	0	3
chr6	93990303	93990304	chunk0168_382_1	20.5155	AR_DHT_Control	chr6	93986342	93990389	-76815590	+	L1MA5	LINE	L1	2083	6200	-1519	3
chr6	94029642	94029643	chunk0168_387_1	6.13992	AR_DHT_Control	chr6	94028709	94031354	-76774625	+	L1MA2	LINE	L1	19	2759	-4806	3
chr6	94448839	94448840	chunk0168_392_1	7.36432	AR_DHT_Control	chr6	94447456	94449184	-76356795	+	L1MD2	LINE	L1	917	2548	-4085	3
chr6	94514418	94514419	chunk0168_393_1	8.27376	AR_DHT_Control	chr6	94511257	94517686	-76288293	+	L1PA8A	LINE	L1	3	6446	0	3
chr6	94541932	94541933	chunk0168_396_1	67.4848	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	94541923	94542818	-76263161	+	L1PA15	LINE	L1	5269	6165	0	3
chr6	94562985	94562986	chunk0168_399_1	25.81263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	94562743	94563303	-76242676	-	L4_B_Mam	LINE	RTE-X	-1985	2956	2414	3
chr6	94572756	94572757	chunk0168_400_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	94572629	94572815	-76233164	+	L1M5	LINE	L1	5494	5674	-569	3
chr6	94658073	94658074	chunk0168_401_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	94657833	94658461	-76147518	-	L1M1	LINE	L1	-6906	659	21	3
chr6	94703215	94703216	chunk0168_402_1	24.4274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	94702332	94703505	-76102474	-	Tigger3b	DNA	TcMar-Tigger	0	1231	3	3
chr6	94941637	94941638	chunk0168_406_1	31.23682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	94941568	94942135	-75863844	+	L1MA7	LINE	L1	6130	6708	-604	3
chr6	94971159	94971160	chunk0168_408_1	18.58662	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	94970568	94971553	-75834426	-	Tigger2	DNA	TcMar-Tigger	-1	2717	1687	3
chr6	94973845	94973846	chunk0168_410_1	5.36932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	94972961	94974095	-75831884	-	Tigger2	DNA	TcMar-Tigger	-1565	1153	2	3
chr6	95234925	95234926	chunk0168_413_1	8.0483	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95234544	95234939	-75571040	-	L1MA3	LINE	L1	0	6305	5883	3
chr6	95366504	95366505	chunk0168_416_1	7.36432	AR_DHT_Control	chr6	95365230	95366874	-75439105	-	MSTB-int	LTR	ERVL-MaLR	0	1651	1	3
chr6	95367957	95367958	chunk0168_417_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	95367931	95368396	-75437583	+	MLT1D	LTR	ERVL-MaLR	1	474	-31	3
chr6	95528949	95528950	chunk0168_421_1	6.57411	AR_DHT_Control	chr6	95528744	95529097	-75276882	+	MLT1B	LTR	ERVL-MaLR	1	390	0	3
chr6	95530452	95530453	chunk0168_422_1	14.8069	AR_DHT_Control	chr6	95530378	95530475	-75275504	-	MER67D	LTR	ERV1	-110	404	310	3
chr6	95532699	95532700	chunk0168_424_1	17.39583	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95532434	95532748	-75273231	-	L2c	LINE	L2	-44	3343	3029	3
chr6	95543993	95543994	chunk0168_427_1	55.27333	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	95543868	95544040	-75261939	-	HERV16-int	LTR	ERVL	-1909	3087	2907	3
chr6	95637095	95637096	chunk0168_432_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	95635428	95637437	-75168542	-	MER52D	LTR	ERV1	0	2123	10	3
chr6	95729698	95729699	chunk0168_439_1	25.82075	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	95729533	95729745	-75076234	+	L2a	LINE	L2	2752	2985	-434	3
chr6	95780962	95780963	chunk0168_443_1	76.6676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95779679	95781144	-75024835	-	L1MC4	LINE	L1	-3660	2555	849	3
chr6	95805306	95805307	chunk0168_444_1	5.0408	AR_DHT_Control	chr6	95805292	95805314	-75000665	+	(GT)n	Simple_repeat	Simple_repeat	1	23	0	3
chr6	95809297	95809298	chunk0168_445_1	7.48058	AR_DHT_Control	chr6	95808330	95810231	-74995748	-	L1PA15	LINE	L1	-3	6162	4241	3
chr6	95841707	95841708	chunk0168_447_1	18.49158	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	95841591	95842098	-74963881	+	LTR40a	LTR	ERVL	1	517	-2	3
chr6	95859511	95859512	chunk0168_448_1	13.2288	AR_DHT_Control	chr6	95859320	95859770	-74946209	-	L2a	LINE	L2	-1501	1918	1468	3
chr6	95896458	95896459	chunk0168_452_1	4.78811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95896252	95896987	-74908992	-	L1MC3	LINE	L1	-3664	2551	1718	3
chr6	95951657	95951658	chunk0168_455_1	38.2927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95951472	95951838	-74854141	-	L2a	LINE	L2	-575	2844	2472	3
chr6	95974295	95974296	chunk0168_457_1	26.31952	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	95974256	95974312	-74831667	-	L1ME4b	LINE	L1	-639	253	198	3
chr6	96240425	96240426	chunk0169_6_1	13.90945	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	96240254	96240615	-74565364	+	L1ME3D	LINE	L1	645	1024	-6079	3
chr6	96296263	96296264	chunk0169_7_1	24.865	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	96294118	96297215	-74508764	+	L1PB3	LINE	L1	3026	6152	-2	3
chr6	96434006	96434007	chunk0169_8_1	65.81967	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	96432903	96435918	-74370061	-	L1PA10	LINE	L1	-4374	2542	461	3
chr6	96574348	96574349	chunk0169_12_1	8.18895	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	96574314	96574589	-74231390	-	MER58B	DNA	hAT-Charlie	-1	340	20	3
chr6	96757250	96757251	chunk0169_17_1	7.36432	AR_DHT_Control	chr6	96757069	96757550	-74048429	+	L1MA8	LINE	L1	5807	6291	0	3
chr6	96823081	96823082	chunk0169_25_1	5.95444	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	96822869	96824000	-73981979	+	Tigger3b	DNA	TcMar-Tigger	1	1203	-28	3
chr6	96885421	96885422	chunk0169_26_1	8.27376	AR_DHT_Control	chr6	96885345	96885731	-73920248	+	MLT1G1	LTR	ERVL-MaLR	213	576	-3	3
chr6	97258309	97258310	chunk0169_31_1	103.2193	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	97257726	97259270	-73546709	-	L1MC4a	LINE	L1	-567	7475	6116	3
chr6	97396465	97396466	chunk0169_37_1	15.56514	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97396375	97396468	-73409511	+	L1ME4a	LINE	L1	5656	5748	-376	3
chr6	97406277	97406278	chunk0169_39_1	161.3761	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97405925	97406434	-73399545	-	MER57D	LTR	ERV1	0	411	3	3
chr6	97414173	97414174	chunk0169_43_1	18.53782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97414126	97414321	-73391658	-	ERVL-B4-int	LTR	ERVL	-231	5483	5314	3
chr6	97690959	97690960	chunk0169_48_1	46.5103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97690839	97691507	-73114472	+	L1MEg	LINE	L1	493	1153	-4931	3
chr6	97952358	97952359	chunk0169_50_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97952157	97952457	-72853522	-	L1MC1	LINE	L1	-1774	4547	4254	3
chr6	97985680	97985681	chunk0169_53_1	5.61083	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97985568	97986329	-72819650	+	L1MD2	LINE	L1	5482	6225	-17	3
chr6	97987456	97987457	chunk0169_54_1	29.1738	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	97987230	97987489	-72818490	+	L2a	LINE	L2	3140	3419	-7	3
chr6	98594419	98594420	chunk0169_59_1	56.221	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	98594150	98594650	-72211329	+	HAL1	LINE	L1	1862	2394	-113	3
chr6	98821103	98821104	chunk0169_61_1	37.16732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	98820865	98821340	-71984639	+	LTR50	LTR	ERVL	9	576	-219	3
chr6	98871359	98871360	chunk0169_64_1	156.0331	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr6	98871129	98872714	-71933265	+	Cheshire	DNA	hAT-Charlie	731	2420	0	3
chr6	99005945	99005946	chunk0169_68_1	6.35715	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	99005577	99006043	-71799936	+	L2c	LINE	L2	2910	3387	0	3
chr6	99050341	99050342	chunk0169_72_1	22.723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	99049972	99050349	-71755630	+	L1M4a1	LINE	L1	1062	1455	-1124	3
chr6	99793578	99793579	chunk0169_89_1	20.9266	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	99793493	99793707	-71012272	-	L2a	LINE	L2	-6	3420	3171	3
chr6	99802785	99802786	chunk0169_90_1	9.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	99802200	99802787	-71003192	-	MER6A	DNA	TcMar-Tigger	0	605	1	3
chr6	99990429	99990430	chunk0169_93_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	99990385	99990431	-70815548	+	(TG)n	Simple_repeat	Simple_repeat	1	46	0	3
chr6	100543906	100543907	chunk0169_101_1	9.63129	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	100543475	100545172	-70260807	+	L1ME1	LINE	L1	2424	4180	-2139	3
chr6	100666653	100666654	chunk0169_104_1	38.3155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	100666616	100666663	-70139316	+	MER5A	DNA	hAT-Charlie	137	183	-6	3
chr6	100713217	100713218	chunk0169_110_1	69.25153	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	100713056	100713731	-70092248	+	L1MC1	LINE	L1	5638	6333	0	3
chr6	100831391	100831392	chunk0169_117_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	100831278	100831562	-69974417	+	L1MEi	LINE	L1	12	325	-1887	3
chr6	100921776	100921777	chunk0169_121_1	50.36131	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	100921458	100922571	-69883408	+	L1PA14	LINE	L1	5044	6150	-11	3
chr6	101039859	101039860	chunk0169_125_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	101038863	101040795	-69765184	-	L1ME1	LINE	L1	-3	6176	4138	3
chr6	101092338	101092339	chunk0169_129_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	101087682	101092852	-69713127	-	L1M2	LINE	L1	-1478	6084	453	3
chr6	101144824	101144825	chunk0169_132_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	101144728	101144917	-69661062	-	LTR33	LTR	ERVL	-315	200	1	3
chr6	101194808	101194809	chunk0169_133_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	101194617	101195100	-69610879	-	Tigger3b	DNA	TcMar-Tigger	-690	541	35	3
chr6	101241568	101241569	chunk0169_136_1	5.6425	AR_DHT_Control	chr6	101241543	101241570	-69564409	+	(AAC)n	Simple_repeat	Simple_repeat	1	27	0	3
chr6	101516018	101516019	chunk0169_145_1	6.71486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	101514901	101516085	-69289894	-	L1PB1	LINE	L1	-1	6150	4985	3
chr6	101741945	101741946	chunk0169_155_1	175.83294	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	101741918	101742025	-69063954	-	MIRb	SINE	MIR	-152	116	4	3
chr6	101879147	101879148	chunk0169_157_1	22.8227	AR_DHT_Control	chr6	101878873	101879265	-68926714	-	MLT1I	LTR	ERVL-MaLR	0	411	10	3
chr6	102181526	102181527	chunk0169_172_1	11.9693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102181319	102181573	-68624406	+	L1MEi	LINE	L1	692	963	-6140	3
chr6	102223955	102223956	chunk0169_175_1	84.28723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	102223553	102224629	-68581350	+	Tigger2b_Pri	DNA	TcMar-Tigger	9	1068	0	3
chr6	102267839	102267840	chunk0169_177_1	49.5074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102267304	102268745	-68537234	+	L1PA7	LINE	L1	4696	6154	0	3
chr6	102347902	102347903	chunk0169_180_1	8.27376	AR_DHT_Control	chr6	102347022	102347920	-68458059	+	L1PA12	LINE	L1	5255	6155	-13	3
chr6	102421136	102421137	chunk0169_182_1	38.25639	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102420025	102423553	-68382426	+	L1PA15	LINE	L1	4644	8160	0	3
chr6	102422714	102422715	chunk0169_184_1	156.2292	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	102420025	102423553	-68382426	+	L1PA15	LINE	L1	4644	8160	0	3
chr6	102475944	102475945	chunk0169_187_1	18.59125	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	102475611	102476055	-68329924	-	L1MC1	LINE	L1	-5226	910	470	3
chr6	102570889	102570890	chunk0169_191_1	14.2911	AR_DHT_Control	chr6	102570716	102571035	-68234944	+	LTR16A	LTR	ERVL	101	451	0	3
chr6	102582565	102582566	chunk0169_192_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	102581410	102582974	-68223005	+	MER52A	LTR	ERV1	1	1755	0	3
chr6	102628469	102628470	chunk0169_193_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	102626182	102629719	-68176260	-	L1MA3	LINE	L1	-3642	3923	15	3
chr6	102648252	102648253	chunk0169_194_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	102648036	102650358	-68155621	+	L1M1	LINE	L1	114	2447	-5118	3
chr6	102774660	102774661	chunk0169_199_1	20.98158	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	102774577	102774786	-68031193	+	L1M7	LINE	L1	470	694	-5524	3
chr6	102937426	102937427	chunk0169_209_1	6.3145	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	102937008	102941850	-67864129	-	L1MCa	LINE	L1	-749	5759	835	3
chr6	103181041	103181042	chunk0169_214_1	11.4884	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	103180348	103181136	-67624843	-	L1MD3	LINE	L1	-605	7180	6312	3
chr6	103599544	103599545	chunk0169_216_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	103599528	103599814	-67206165	+	LTR41B	LTR	ERVL	464	758	0	3
chr6	104162174	104162175	chunk0169_218_1	18.0716	AR_DHT_Control	chr6	104161909	104164549	-66641430	+	L1M1	LINE	L1	19	2704	-4861	3
chr6	104229094	104229095	chunk0169_221_1	16.40152	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	104228931	104229174	-66576805	-	MLT1O	LTR	ERVL-MaLR	-120	422	163	3
chr6	104362859	104362860	chunk0169_222_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	104362677	104362980	-66442999	-	L2c	LINE	L2	-53	3334	3022	3
chr6	104388631	104388632	chunk0169_223_1	8.31418	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	104387968	104388675	-66417304	+	L1MA7	LINE	L1	3904	4623	-2939	3
chr6	104638882	104638883	chunk0169_227_1	52.80953	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	104638560	104639056	-66166923	-	L2b	LINE	L2	0	3387	2917	3
chr6	104935146	104935147	chunk0169_232_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	104935020	104935649	-65870330	-	L1ME4b	LINE	L1	-9	883	225	3
chr6	104996371	104996372	chunk0169_235_1	84.7527	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	104996002	104996492	-65809487	-	MER90	LTR	ERV1	-23	552	1	3
chr6	105051621	105051622	chunk0169_236_1	7.36432	AR_DHT_Control	chr6	105051596	105051687	-65754292	+	L2a	LINE	L2	3307	3417	-9	3
chr6	105091607	105091608	chunk0169_237_1	6.88185	AR_DHT_Control	chr6	105091588	105091687	-65714292	-	MIRc	SINE	MIR	-127	141	33	3
chr6	105144786	105144787	chunk0169_242_1	8.27376	AR_DHT_Control	chr6	105144552	105144936	-65661043	-	L1MC2	LINE	L1	-491	5853	5450	3
chr6	105255084	105255085	chunk0169_246_1	19.517	AR_DHT_Control	chr6	105255008	105255263	-65550716	+	L2	LINE	L2	1579	1820	-1599	3
chr6	105268453	105268454	chunk0169_249_1	69.1142	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	105268161	105269070	-65536909	+	L1MC1	LINE	L1	5565	6508	0	3
chr6	105296164	105296165	chunk0169_253_1	12.13875	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	105295602	105296217	-65509762	-	L1ME4b	LINE	L1	-184	813	198	3
chr6	105461867	105461868	chunk0169_263_1	58.0287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	105461732	105462158	-65343821	-	L1MD1	LINE	L1	0	6242	5816	3
chr6	105901787	105901788	chunk0169_291_1	14.6644	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	105901756	105901846	-64904133	-	L1ME4a	LINE	L1	-378	5746	5672	3
chr6	105930022	105930023	chunk0169_293_1	7.22796	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	105929864	105930205	-64875774	+	LTR33	LTR	ERVL	162	515	0	3
chr6	105968763	105968764	chunk0169_294_1	22.53939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	105968716	105968770	-64837209	+	MLT1K	LTR	ERVL-MaLR	539	595	0	3
chr6	106180630	106180631	chunk0169_317_1	20.3276	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106180479	106180677	-64625302	+	L2c	LINE	L2	3177	3387	0	3
chr6	106247523	106247524	chunk0169_320_1	48.5083	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106247490	106247658	-64558321	-	Tigger17a	DNA	TcMar-Tigger	-1	653	471	3
chr6	106300677	106300678	chunk0169_324_1	34.59354	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106300492	106300820	-64505159	-	Tigger3a	DNA	TcMar-Tigger	0	348	4	3
chr6	106340762	106340763	chunk0169_327_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	106340591	106340763	-64465216	+	L1MC1	LINE	L1	6014	6188	-145	3
chr6	106420158	106420159	chunk0169_335_1	18.17481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106420117	106420614	-64385365	-	MER4CL34	LTR	ERV1	0	765	1	3
chr6	106469289	106469290	chunk0169_340_1	19.9068	AR_DHT_Control	chr6	106468845	106469491	-64336488	+	L2b	LINE	L2	2719	3375	0	3
chr6	106517826	106517827	chunk0169_345_1	15.68825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	106517717	106517856	-64288123	-	MIR3	SINE	MIR	-49	159	24	3
chr6	106608308	106608309	chunk0169_350_1	22.2619	AR_DHT_Control	chr6	106607815	106608636	-64197343	+	L1MA5	LINE	L1	5492	6300	0	3
chr6	106651140	106651141	chunk0169_353_1	16.92897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106650933	106651217	-64154762	-	L1MB2	LINE	L1	-1	6170	5853	3
chr6	106739630	106739631	chunk0169_357_1	8.27376	AR_DHT_Control	chr6	106739555	106739864	-64066115	+	MamGypLTR2c	LTR	Gypsy	641	952	-116	3
chr6	106764839	106764840	chunk0169_359_1	13.71601	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	106764581	106764975	-64041004	-	L2-3_Crp	LINE	L2	-1151	945	564	3
chr6	107071706	107071707	chunk0169_365_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	107071620	107072049	-63733930	+	L1ME1	LINE	L1	5729	6179	0	3
chr6	107081018	107081019	chunk0169_366_1	13.0353	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	107080962	107081207	-63724772	-	AluJb	SINE	Alu	-13	299	1	3
chr6	107216753	107216754	chunk0169_369_1	23.88431	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	107216504	107217072	-63588907	+	L1MB7	LINE	L1	4424	4998	-1148	3
chr6	107271323	107271324	chunk0169_376_1	27.237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	107270411	107271773	-63534206	-	BLACKJACK	DNA	hAT-Blackjack	-1273	1696	242	3
chr6	107272495	107272496	chunk0169_377_1	9.94664	AR_DHT_Control	chr6	107272441	107272633	-63533346	+	MLT1J	LTR	ERVL-MaLR	296	512	0	3
chr6	107276698	107276699	chunk0169_378_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	107276630	107277067	-63528912	+	MLT1H2	LTR	ERVL-MaLR	1	485	-4	3
chr6	107401002	107401003	chunk0169_379_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	107400992	107401861	-63404118	+	L1M2	LINE	L1	2120	2798	-4784	3
chr6	107622419	107622420	chunk0169_383_1	15.07763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	107622302	107623794	-63182185	+	L3	LINE	CR1	1037	2831	-1268	3
chr6	107881768	107881769	chunk0169_388_1	10.1791	AR_DHT_Control	chr6	107881457	107881918	-62924061	+	L2c	LINE	L2	2911	3387	0	3
chr6	108063961	108063962	chunk0169_393_1	7.36432	AR_DHT_Control	chr6	108063747	108064009	-62741970	-	MIR	SINE	MIR	-10	252	2	3
chr6	108298034	108298035	chunk0169_404_1	11.8363	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	108297941	108298070	-62507909	-	MIRb	SINE	MIR	0	268	130	3
chr6	108644395	108644396	chunk0169_422_1	34.50121	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	108644388	108644503	-62161476	+	L2-3_Crp	LINE	L2	755	868	-1228	3
chr6	108764040	108764041	chunk0169_442_1	93.22475	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	108762964	108764199	-62041780	+	L2a	LINE	L2	1995	3425	-1	3
chr6	108764861	108764862	chunk0169_444_1	35.0331	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	108764736	108764894	-62041085	+	UCON8	DNA	DNA	757	916	-199	3
chr6	108765722	108765723	chunk0169_446_1	25.4421	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	108765633	108765740	-62040239	+	MIR3	SINE	MIR	4	104	-126	3
chr6	108769320	108769321	chunk0169_449_1	13.37161	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	108769176	108769408	-62036571	+	MLT1K	LTR	ERVL-MaLR	1	251	-344	3
chr6	108934961	108934962	chunk0170_1_1	21.62686	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	108934863	108935114	-61870865	-	MIR	SINE	MIR	-5	257	7	3
chr6	109010881	109010882	chunk0170_6_1	67.6503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	109010771	109011221	-61794758	-	L4_A_Mam	LINE	RTE-X	-952	4038	3542	3
chr6	109112734	109112735	chunk0170_15_1	11.1716	AR_DHT_Control	chr6	109109551	109113218	-61692761	-	L1PA7	LINE	L1	-11	6143	2442	3
chr6	109204485	109204486	chunk0170_24_1	20.68687	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	109204406	109205042	-61600937	-	Tigger17a	DNA	TcMar-Tigger	-2	652	1	3
chr6	109351897	109351898	chunk0170_38_1	39.58741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	109351804	109352387	-61453592	+	L2	LINE	L2	1950	2570	-849	3
chr6	109371008	109371009	chunk0170_41_1	92.9439	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	109370950	109371038	-61434941	-	MER58A	DNA	hAT-Charlie	-97	127	37	3
chr6	109414339	109414340	chunk0170_43_1	16.7535	AR_DHT_Control	chr6	109414264	109414477	-61391502	-	L1MC5	LINE	L1	-1893	1098	882	3
chr6	109418409	109418410	chunk0170_44_1	8.41723	AR_DHT_Control	chr6	109418383	109418525	-61387454	-	L1MC5	LINE	L1	-2756	235	97	3
chr6	109453793	109453794	chunk0170_48_1	4.96796	AR_DHT_Control	chr6	109453780	109453846	-61352133	+	(GCACCCA)n	Simple_repeat	Simple_repeat	1	67	0	3
chr6	109471045	109471046	chunk0170_53_1	90.25029	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	109470920	109471165	-61334814	-	L1ME4b	LINE	L1	-343	549	246	3
chr6	109486187	109486188	chunk0170_55_1	7.27655	AR_DHT_Control	chr6	109486090	109486362	-61319617	+	Tigger3c	DNA	TcMar-Tigger	313	601	-1	3
chr6	109535365	109535366	chunk0170_63_1	16.27964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	109534604	109540728	-61265251	-	L1PA5	LINE	L1	-3	6151	24	3
chr6	109814689	109814690	chunk0170_75_1	62.7116	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	109814623	109815189	-60990790	-	L1MC4	LINE	L1	-1003	7039	6439	3
chr6	109835072	109835073	chunk0170_82_1	5.20051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	109835038	109835235	-60970744	+	L2c	LINE	L2	3176	3384	-3	3
chr6	110042808	110042809	chunk0170_84_1	4.83532	AR_DHT_Control	chr6	110042743	110042819	-60763160	-	MamTip2	DNA	hAT-Tip100	-37	268	192	3
chr6	110069678	110069679	chunk0170_85_1	5.9324	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	110069367	110070187	-60735792	+	L2a	LINE	L2	2364	3426	0	3
chr6	110089419	110089420	chunk0170_86_1	11.0973	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110089143	110089696	-60716283	+	L1MEg	LINE	L1	824	1351	-884	3
chr6	110141593	110141594	chunk0170_87_1	19.04786	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110141162	110141688	-60664291	+	L2c	LINE	L2	2824	3386	-1	3
chr6	110329970	110329971	chunk0170_89_1	6.6351	AR_DHT_Control	chr6	110329832	110331376	-60474603	+	L1MD2	LINE	L1	47	1599	-5041	3
chr6	110389919	110389920	chunk0170_91_1	60.3343	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	110389443	110389988	-60415991	-	MER89	LTR	ERV1	-18	541	5	3
chr6	110436757	110436758	chunk0170_93_1	28.89074	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	110436752	110436776	-60369203	+	(TTTG)n	Simple_repeat	Simple_repeat	1	24	0	3
chr6	110483192	110483193	chunk0170_96_1	20.57796	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	110483052	110483397	-60322582	+	Tigger3b	DNA	TcMar-Tigger	1	341	-890	3
chr6	110535054	110535055	chunk0170_102_1	5.90945	AR_DHT_Control	chr6	110534589	110535312	-60270667	+	LTR8	LTR	ERV1	3	691	0	3
chr6	110593836	110593837	chunk0170_105_1	11.1388	AR_DHT_Control	chr6	110593645	110593970	-60212009	+	MSTB	LTR	ERVL-MaLR	1	344	-82	3
chr6	110633859	110633860	chunk0170_109_1	19.39309	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	110633677	110633887	-60172092	-	MIRc	SINE	MIR	-3	265	56	3
chr6	110643444	110643445	chunk0170_110_1	8.31418	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110643404	110643508	-60162471	+	L1MA3	LINE	L1	5849	5952	-353	3
chr6	110656212	110656213	chunk0170_113_1	33.6481	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	110655397	110656297	-60149682	+	L2b	LINE	L2	2321	3368	-7	3
chr6	110672669	110672670	chunk0170_119_1	123.3384	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110672484	110672765	-60133214	-	L1ME4b	LINE	L1	-10	882	585	3
chr6	110763833	110763834	chunk0170_125_1	57.1998	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	110763714	110764668	-60041311	+	L1MA5	LINE	L1	4110	5043	-1103	3
chr6	110898500	110898501	chunk0170_128_1	9.64794	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110898409	110898565	-59907414	-	L1ME1	LINE	L1	-334	5845	5680	3
chr6	110952545	110952546	chunk0170_133_1	152.8774	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	110952318	110952837	-59853142	+	LTR44	LTR	ERV1	1	519	0	3
chr6	110966032	110966033	chunk0170_135_1	8.27376	AR_DHT_Control	chr6	110965782	110966191	-59839788	-	MLT1F	LTR	ERVL-MaLR	0	548	131	3
chr6	111045881	111045882	chunk0170_136_1	7.36574	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111045021	111046386	-59759593	-	L1M4	LINE	L1	-944	5202	3872	3
chr6	111235076	111235077	chunk0170_142_1	16.3678	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111234358	111235533	-59570446	+	L1PB1	LINE	L1	4435	5608	-543	3
chr6	111239673	111239674	chunk0170_143_1	36.2694	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111239590	111239723	-59566256	-	L1ME3Cz	LINE	L1	-690	5434	5309	3
chr6	111360129	111360130	chunk0170_150_1	14.52227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111359927	111360406	-59445573	+	L1ME4b	LINE	L1	317	838	-54	3
chr6	111427529	111427530	chunk0170_151_1	9.17597	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111427415	111427977	-59378002	+	L1M3f	LINE	L1	1	565	-4763	3
chr6	111478991	111478992	chunk0170_155_1	10.44413	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111478893	111479199	-59326780	+	Tigger19b	DNA	TcMar-Tigger	92	449	-101	3
chr6	111542586	111542587	chunk0170_160_1	80.74068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111542329	111542927	-59263052	-	L2a	LINE	L2	-176	3250	2551	3
chr6	111556200	111556201	chunk0170_162_1	11.3974	AR_DHT_Control	chr6	111556193	111556237	-59249742	+	(GT)n	Simple_repeat	Simple_repeat	1	44	0	3
chr6	111662496	111662497	chunk0170_169_1	22.08191	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	111662492	111662607	-59143372	+	L1ME1	LINE	L1	6049	6169	-10	3
chr6	111768275	111768276	chunk0170_177_1	33.8748	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	111768180	111768326	-59037653	+	L2c	LINE	L2	3210	3387	0	3
chr6	112202459	112202460	chunk0170_194_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	112202443	112202469	-58603510	+	(GT)n	Simple_repeat	Simple_repeat	1	26	0	3
chr6	112395910	112395911	chunk0170_198_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	112394960	112396181	-58409798	-	L1MA5A	LINE	L1	0	6300	4947	3
chr6	112433493	112433494	chunk0170_199_1	33.4931	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	112433435	112433642	-58372337	-	MIRc	SINE	MIR	-14	254	30	3
chr6	112601358	112601359	chunk0170_209_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	112600602	112602161	-58203818	+	L1MA3	LINE	L1	22	1583	-5982	3
chr6	113074187	113074188	chunk0170_213_1	58.2395	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	113073449	113074253	-57731726	+	L1ME2	LINE	L1	5375	6157	-7	3
chr6	113129698	113129699	chunk0170_216_1	296.4726	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	113129633	113130134	-57675845	-	L2c	LINE	L2	-340	3079	2570	3
chr6	113211447	113211448	chunk0170_221_1	85.0212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	113211290	113211530	-57594449	+	Tigger13a	DNA	TcMar-Tigger	6	258	-513	3
chr6	113279916	113279917	chunk0170_222_1	14.3818	AR_DHT_Control	chr6	113279475	113280258	-57525721	+	L1MC3	LINE	L1	6711	7495	-290	3
chr6	113310832	113310833	chunk0170_223_1	14.1316	AR_DHT_Control	chr6	113310653	113311191	-57494788	-	L1ME5	LINE	L1	-12	6182	5657	3
chr6	113330676	113330677	chunk0170_224_1	31.2147	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	113330525	113330736	-57475243	+	MIRb	SINE	MIR	42	253	-15	3
chr6	113352332	113352333	chunk0170_226_1	7.36432	AR_DHT_Control	chr6	113352287	113352708	-57453271	+	LTR33	LTR	ERVL	13	515	0	3
chr6	113451358	113451359	chunk0170_232_1	13.6601	AR_DHT_Control	chr6	113451308	113451675	-57354304	-	Tigger3b	DNA	TcMar-Tigger	0	1231	872	3
chr6	113616829	113616830	chunk0170_238_1	25.47071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	113616311	113617145	-57188834	+	L1ME2	LINE	L1	5066	5948	-216	3
chr6	113723414	113723415	chunk0170_256_1	83.234	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	113723361	113723605	-57082374	-	L2c	LINE	L2	-41	3346	3018	3
chr6	114051287	114051288	chunk0170_271_1	36.6774	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	114050337	114051552	-56754427	+	Tigger3b	DNA	TcMar-Tigger	1	1230	-1	3
chr6	114194011	114194012	chunk0170_280_1	28.01005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	114193762	114194276	-56611703	-	L4_C_Mam	LINE	RTE-X	-2855	2283	1710	3
chr6	114272922	114272923	chunk0170_281_1	26.3602	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	114272731	114273494	-56532485	-	L2a	LINE	L2	-267	3159	2285	3
chr6	114529977	114529978	chunk0170_286_1	38.56424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	114529382	114532992	-56272987	-	L1MA4	LINE	L1	-525	6491	2794	3
chr6	114857103	114857104	chunk0170_287_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	114856203	114857573	-55948406	+	L1PBa1	LINE	L1	4872	6257	-360	3
chr6	115131939	115131940	chunk0170_289_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	115131578	115132467	-55673512	+	LTR28C	LTR	ERV1	1	767	0	3
chr6	115328883	115328884	chunk0170_291_1	17.14573	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	115328505	115328898	-55477081	+	L4_A_Mam	LINE	RTE-X	4486	4903	-87	3
chr6	115533736	115533737	chunk0170_297_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	115533269	115534357	-55271622	-	L1MC1	LINE	L1	-1	6332	5285	3
chr6	115545018	115545019	chunk0170_298_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	115544769	115551175	-55254804	+	L1PA10	LINE	L1	4	6347	-6	3
chr6	115657217	115657218	chunk0170_300_1	18.6184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	115656265	115660119	-55145860	-	L1PB1	LINE	L1	-1	6866	3001	3
chr6	115708086	115708087	chunk0170_302_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	115707975	115708484	-55097495	-	L3	LINE	CR1	-126	3973	3429	3
chr6	115842066	115842067	chunk0170_304_1	19.8018	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	115841513	115842710	-54963269	+	L1MC2	LINE	L1	5117	6307	-37	3
chr6	115920062	115920063	chunk0170_307_1	5.00158	AR_DHT_Control	chr6	115920030	115920083	-54885896	+	(TGG)n	Simple_repeat	Simple_repeat	1	53	0	3
chr6	116111731	116111732	chunk0170_318_1	239.3447	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	116111699	116111758	-54694221	+	(TGTT)n	Simple_repeat	Simple_repeat	1	59	0	3
chr6	116130736	116130737	chunk0170_324_1	87.1018	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	116129735	116131674	-54674305	-	L1MC5	LINE	L1	-450	8854	7069	3
chr6	116211129	116211130	chunk0170_329_1	6.48643	AR_DHT_Control	chr6	116210899	116211392	-54594587	+	MLT1G	LTR	ERVL-MaLR	3	573	-6	3
chr6	116244489	116244490	chunk0170_331_1	106.2805	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	116244322	116244505	-54561474	+	MER5A	DNA	hAT-Charlie	1	189	0	3
chr6	116311522	116311523	chunk0170_340_1	67.9209	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	116311490	116311657	-54494322	+	L1ME4b	LINE	L1	453	641	-283	3
chr6	116315199	116315200	chunk0170_342_1	17.0779	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	116315158	116315251	-54490728	-	MIR	SINE	MIR	0	262	162	3
chr6	116404165	116404166	chunk0170_349_1	9.34168	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	116404006	116404170	-54401809	-	L4_A_Mam	LINE	RTE-X	-530	4460	4290	3
chr6	116631685	116631686	chunk0170_357_1	59.56748	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	116631253	116631831	-54174148	-	MER76	LTR	ERVL	-22	669	3	3
chr6	116811059	116811060	chunk0170_365_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	116810811	116812642	-53993337	+	L1MA4A	LINE	L1	1092	2896	-3953	3
chr6	116964011	116964012	chunk0170_381_1	31.44146	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	116963880	116964493	-53841486	-	MLT1E2	LTR	ERVL-MaLR	-11	616	1	3
chr6	116982587	116982588	chunk0170_383_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	116982187	116983082	-53822897	-	L1MEc	LINE	L1	-3032	3287	2372	3
chr6	117148003	117148004	chunk0170_389_1	10.8743	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	117147352	117148081	-53657898	+	Charlie7	DNA	hAT-Charlie	531	1353	-1259	3
chr6	117170271	117170272	chunk0170_390_1	13.3531	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	117170183	117170336	-53635643	+	L2a	LINE	L2	3272	3425	-1	3
chr6	117309261	117309262	chunk0170_392_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	117309196	117309310	-53496669	+	(CACATG)n	Simple_repeat	Simple_repeat	1	126	0	3
chr6	117558943	117558944	chunk0170_401_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	117558490	117559022	-53246957	-	MER68	LTR	ERVL	-10	553	1	3
chr6	117603387	117603388	chunk0170_403_1	14.0461	AR_DHT_Control	chr6	117603254	117603591	-53202388	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr6	117935993	117935994	chunk0170_408_1	5.9729	AR_DHT_Control	chr6	117935949	117936090	-52869889	-	HAL1ME	LINE	L1	-1445	1020	881	3
chr6	118362970	118362971	chunk0170_421_1	15.06	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118362243	118363491	-52442488	+	L1M5	LINE	L1	3382	4675	-1471	3
chr6	118408548	118408549	chunk0170_422_1	4.70357	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	118408350	118409153	-52396826	+	L1PA13	LINE	L1	351	1239	-5546	3
chr6	118539333	118539334	chunk0170_425_1	53.076	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118539194	118539496	-52266483	+	Tigger3a	DNA	TcMar-Tigger	2	339	-9	3
chr6	118675026	118675027	chunk0170_427_1	38.32099	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118674546	118675499	-52130480	+	L1MB7	LINE	L1	5208	6148	-36	3
chr6	118763012	118763013	chunk0170_429_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118762918	118763090	-52042889	+	MLT1L	LTR	ERVL-MaLR	311	482	-128	3
chr6	118782154	118782155	chunk0170_430_1	20.09928	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118782075	118782277	-52023702	-	MER58C	DNA	hAT-Charlie	-3	212	1	3
chr6	118844766	118844767	chunk0170_434_1	15.14976	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	118844711	118844899	-51961080	-	MamRTE1	LINE	RTE-BovB	-174	3638	3446	3
chr6	118875924	118875925	chunk0170_435_1	125.3502	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118875682	118876557	-51929422	+	L1MC1	LINE	L1	5441	6327	-6	3
chr6	118943350	118943351	chunk0170_439_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	118943260	118944081	-51861898	+	L1M1	LINE	L1	3019	3879	-3686	3
chr6	119201751	119201752	chunk0170_442_1	163.5808	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	119201642	119202784	-51603195	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	1	3
chr6	119260382	119260383	chunk0170_450_1	5.23393	AR_DHT_Control	chr6	119260269	119260502	-51545477	-	L1ME3G	LINE	L1	-386	538	366	3
chr6	119261575	119261576	chunk0170_451_1	5.69781	AR_DHT_Control	chr6	119261528	119261580	-51544399	+	L3	LINE	CR1	387	439	-3660	3
chr6	119280316	119280317	chunk0170_452_1	42.36953	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	119280268	119280436	-51525543	+	MIR	SINE	MIR	35	206	-56	3
chr6	119327287	119327288	chunk0170_456_1	19.6141	AR_DHT_Control	chr6	119327280	119327385	-51478594	+	U6	snRNA	snRNA	1	107	0	3
chr6	119459789	119459790	chunk0171_1_1	12.0293	AR_DHT_Control	chr6	119459613	119460009	-51345970	+	L3	LINE	CR1	2285	2713	-1386	3
chr6	119476119	119476120	chunk0171_3_1	47.1582	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	119475867	119476127	-51329852	+	L1MC4	LINE	L1	7705	7953	-89	3
chr6	119491284	119491285	chunk0171_4_1	40.4814	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	119489191	119492975	-51313004	+	L1PB1	LINE	L1	2691	6496	-371	3
chr6	119679019	119679020	chunk0171_11_1	33.6359	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	119678846	119679044	-51126935	+	MER58A	DNA	hAT-Charlie	2	223	-1	3
chr6	119757543	119757544	chunk0171_14_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	119757120	119757724	-51048255	-	L1PA17	LINE	L1	-4855	2080	1509	3
chr6	119854773	119854774	chunk0171_15_1	5.59431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	119854428	119854845	-50951134	+	L4_C_Mam	LINE	RTE-X	2067	2521	-2617	3
chr6	119959475	119959476	chunk0171_18_1	23.3512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	119959332	119959589	-50846390	+	L1ME4c	LINE	L1	5550	5714	-410	3
chr6	120007578	120007579	chunk0171_21_1	74.9417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120007122	120008687	-50797292	-	L1ME2z	LINE	L1	-4	6440	4814	3
chr6	120098194	120098195	chunk0171_22_1	7.35485	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120097839	120098195	-50707784	-	L1MB5	LINE	L1	-8	6166	5792	3
chr6	120247442	120247443	chunk0171_25_1	9.19836	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120247408	120247781	-50558198	+	LTR86C	LTR	ERVL	32	415	-206	3
chr6	120249164	120249165	chunk0171_26_1	10.4948	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120248248	120249279	-50556700	+	L1MA4	LINE	L1	5234	6289	-11	3
chr6	120372997	120372998	chunk0171_28_1	26.8153	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	120372372	120373337	-50432642	+	L2	LINE	L2	1927	2988	-431	3
chr6	120500671	120500672	chunk0171_32_1	30.401	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120500297	120500927	-50305052	-	HSMAR2	DNA	TcMar-Mariner	-668	634	2	3
chr6	120501765	120501766	chunk0171_33_1	7.26927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120501395	120501804	-50304175	-	L1M3	LINE	L1	-1656	4484	4087	3
chr6	120556674	120556675	chunk0171_36_1	88.8052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	120556625	120556963	-50249016	+	LTR108e_Mam	LTR	ERVL	166	547	-1	3
chr6	120841976	120841977	chunk0171_41_1	42.62553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	120841932	120841993	-49963986	-	L2c	LINE	L2	-67	3320	3245	3
chr6	120934037	120934038	chunk0171_43_1	10.5516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	120933689	120934875	-49871104	+	L1PB4	LINE	L1	4889	6143	-13	3
chr6	120984335	120984336	chunk0171_47_1	12.2415	AR_DHT_Control	chr6	120984293	120984459	-49821520	+	MIR3	SINE	MIR	8	184	-24	3
chr6	121008670	121008671	chunk0171_50_1	6.48643	AR_DHT_Control	chr6	121008179	121008711	-49797268	-	L2a	LINE	L2	-1607	1812	1268	3
chr6	121162103	121162104	chunk0171_53_1	155.20892	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	121161201	121162393	-49643586	-	L1PA11	LINE	L1	-16	6158	4961	3
chr6	121176431	121176432	chunk0171_55_1	13.47118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	121176416	121176575	-49629404	+	Tigger4	DNA	TcMar-Tigger	1	168	-2563	3
chr6	121211909	121211910	chunk0171_56_1	35.08459	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	121211855	121211979	-49594000	+	L2a	LINE	L2	3303	3426	0	3
chr6	121306490	121306491	chunk0171_57_1	102.2875	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	121306341	121306504	-49499475	+	L2a	LINE	L2	3255	3421	-5	3
chr6	121593297	121593298	chunk0171_74_1	8.27376	AR_DHT_Control	chr6	121593261	121593661	-49212318	+	L3	LINE	CR1	23	446	-3653	3
chr6	121663413	121663414	chunk0171_79_1	23.9236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	121663406	121663632	-49142347	-	L2a	LINE	L2	0	3426	3151	3
chr6	121826263	121826264	chunk0171_82_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	121826040	121826405	-48979574	-	LTR16	LTR	ERVL	-3	435	26	3
chr6	121879219	121879220	chunk0171_88_1	26.38765	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	121879202	121879535	-48926444	+	Charlie1b	DNA	hAT-Charlie	8	347	-176	3
chr6	121940888	121940889	chunk0171_92_1	46.0195	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	121939409	121941262	-48864717	-	L1M4	LINE	L1	-2029	4609	2689	3
chr6	121946311	121946312	chunk0171_94_1	21.7581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	121945272	121951267	-48854712	-	L1PB1	LINE	L1	0	6867	638	3
chr6	121974455	121974456	chunk0171_97_1	54.4656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	121974069	121974506	-48831473	-	HAL1M8	LINE	L1	-802	2189	1724	3
chr6	122126851	122126852	chunk0171_106_1	45.10645	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	122126472	122126882	-48679097	+	L1M5	LINE	L1	3166	3624	-2522	3
chr6	122166355	122166356	chunk0171_110_1	71.5408	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	122165660	122166358	-48639621	+	HAL1b	LINE	L1	327	1038	-1383	3
chr6	122460539	122460540	chunk0171_115_1	23.5236	AR_DHT_Control	chr6	122460433	122461423	-48344556	+	L1ME1	LINE	L1	557	1669	-4746	3
chr6	122495030	122495031	chunk0171_116_1	14.2738	AR_DHT_Control	chr6	122494616	122498112	-48307867	+	L1PA15-16	LINE	L1	10	3587	-3262	3
chr6	122621548	122621549	chunk0171_120_1	10.5201	AR_DHT_Control	chr6	122621344	122621727	-48184252	-	L2c	LINE	L2	-37	3350	2917	3
chr6	122697112	122697113	chunk0171_125_1	19.7116	AR_DHT_Control	chr6	122696914	122697357	-48108622	-	LTR53	LTR	ERVL	0	519	1	3
chr6	122897823	122897824	chunk0171_135_1	22.56574	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	122897551	122897824	-47908155	+	L2a	LINE	L2	3140	3426	0	3
chr6	122897823	122897824	chunk0171_135_1	22.56574	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	122897818	122898344	-47907635	+	L3b	LINE	CR1	3332	3944	-155	3
chr6	123453120	123453121	chunk0171_136_1	12.6608	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	123447790	123454291	-47351688	+	L1PB1	LINE	L1	318	6866	-1	3
chr6	123614919	123614920	chunk0171_141_1	3.65712	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	123614634	123615441	-47190538	+	L1MA5	LINE	L1	4972	5786	-514	3
chr6	123658991	123658992	chunk0171_143_1	37.57995	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	123658402	123659521	-47146458	-	L2c	LINE	L2	-661	2758	1546	3
chr6	123685617	123685618	chunk0171_144_1	13.64404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	123685566	123685675	-47120304	-	Arthur1A	DNA	hAT-Tip100	-58	119	1	3
chr6	123741009	123741010	chunk0171_147_1	87.3831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	123740518	123741662	-47064317	-	L1MC3	LINE	L1	-1709	6076	4951	3
chr6	123972843	123972844	chunk0171_152_1	44.0734	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	123972792	123972920	-46833059	+	MIR	SINE	MIR	124	236	-26	3
chr6	124743232	124743233	chunk0171_165_1	140.1965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	124743097	124743277	-46062702	+	MIR	SINE	MIR	11	200	-62	3
chr6	124869309	124869310	chunk0171_168_1	100.45141	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	124869075	124869939	-45936040	+	L1MC1	LINE	L1	5455	6327	-6	3
chr6	124999701	124999702	chunk0171_170_1	5.6503	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	124999700	124999989	-45805990	-	Charlie29a	DNA	hAT-Charlie	0	719	443	3
chr6	125198817	125198818	chunk0171_184_1	6.43446	AR_DHT_Control	chr6	125198776	125198951	-45607028	+	MER20	DNA	hAT-Charlie	46	217	-2	3
chr6	125267981	125267982	chunk0171_193_1	11.643	AR_DHT_Control	chr6	125267900	125268239	-45537740	+	LTR18A	LTR	ERVL	1	357	0	3
chr6	125752983	125752984	chunk0171_203_1	49.8385	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	125752934	125753001	-45052978	+	OldhAT1	DNA	hAT-Ac	110	181	-2667	3
chr6	126113044	126113045	chunk0171_217_1	5.77762	AR_DHT_Control	chr6	126112981	126113167	-44692812	-	L2c	LINE	L2	-4	3383	3194	3
chr6	126396282	126396283	chunk0171_230_1	5.6425	AR_DHT_Control	chr6	126393817	126397665	-44408314	-	L1MA2	LINE	L1	-3688	3877	17	3
chr6	127141030	127141031	chunk0171_247_1	13.67988	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	127140707	127141175	-43664804	+	L2b	LINE	L2	2887	3366	-9	3
chr6	127176452	127176453	chunk0171_249_1	6.98538	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	127176425	127176457	-43629522	+	(TTAT)n	Simple_repeat	Simple_repeat	1	35	0	3
chr6	127246073	127246074	chunk0171_253_1	11.9693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	127245275	127246188	-43559791	+	L1M5	LINE	L1	3583	4570	-1576	3
chr6	127694206	127694207	chunk0171_272_1	92.5326	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	127693696	127694396	-43111583	-	Tigger6a	DNA	TcMar-Tigger	-361	722	1	3
chr6	127956301	127956302	chunk0171_278_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	127956170	127956601	-42849378	+	MLT1C	LTR	ERVL-MaLR	1	467	0	3
chr6	128398294	128398295	chunk0171_293_1	17.4971	AR_DHT_Control	chr6	128398008	128398465	-42407514	-	MER51A	LTR	ERV1	-9	625	1	3
chr6	128492569	128492570	chunk0171_296_1	52.6492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	128492461	128492643	-42313336	+	MIR	SINE	MIR	2	228	-34	3
chr6	128599210	128599211	chunk0171_299_1	16.0762	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	128599019	128599258	-42206721	+	MIR	SINE	MIR	2	248	-14	3
chr6	128762026	128762027	chunk0171_302_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	128761841	128762278	-42043701	+	L1PA15	LINE	L1	519	1271	-5515	3
chr6	128938382	128938383	chunk0171_303_1	14.9999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	128938353	128938442	-41867537	-	MIRb	SINE	MIR	-16	252	151	3
chr6	129208051	129208052	chunk0171_305_1	88.0371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	129207754	129208212	-41597767	-	MER110	LTR	ERV1	0	491	1	3
chr6	129656711	129656712	chunk0171_316_1	11.8978	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	129656702	129656863	-41149116	-	L3b	LINE	CR1	-136	5096	4915	3
chr6	129920219	129920220	chunk0171_332_1	21.20604	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	129920129	129920351	-40885628	-	MER58A	DNA	hAT-Charlie	0	224	3	3
chr6	129934335	129934336	chunk0171_333_1	13.2913	AR_DHT_Control	chr6	129934065	129934543	-40871436	-	L1ME4b	LINE	L1	-246	646	133	3
chr6	129938073	129938074	chunk0171_334_1	41.2336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	129937386	129938446	-40867533	-	L1MC3	LINE	L1	0	7785	6704	3
chr6	129958300	129958301	chunk0171_338_1	5.99997	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	129957897	129959908	-40846071	+	MER52D	LTR	ERV1	10	2117	-6	3
chr6	129979994	129979995	chunk0171_339_1	10.1791	AR_DHT_Control	chr6	129979480	129980089	-40825890	-	L1MC4	LINE	L1	-126	7916	7266	3
chr6	129992858	129992859	chunk0171_341_1	79.3879	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	129992719	129992899	-40813080	-	MIR	SINE	MIR	-53	209	26	3
chr6	130008236	130008237	chunk0171_343_1	165.5629	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	130008076	130008576	-40797403	-	L1MB3	LINE	L1	-10	6173	5671	3
chr6	130091262	130091263	chunk0171_347_1	38.5695	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130090888	130091341	-40714638	-	L1M5	LINE	L1	-745	5401	4921	3
chr6	130230812	130230813	chunk0171_350_1	65.4435	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130230809	130231024	-40574955	+	L3	LINE	CR1	2983	3198	-901	3
chr6	130232695	130232696	chunk0171_351_1	8.35315	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130232587	130232769	-40573210	+	MIRc	SINE	MIR	37	220	-48	3
chr6	130305743	130305744	chunk0171_352_1	10.7282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130305211	130305825	-40500154	-	L1M5	LINE	L1	-1794	4352	3735	3
chr6	130308004	130308005	chunk0171_353_1	4.46365	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130307512	130308023	-40497956	-	L4_B_Mam	LINE	RTE-X	-1776	3165	2612	3
chr6	130558592	130558593	chunk0171_355_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130558488	130558719	-40247260	-	MIR	SINE	MIR	-14	248	5	3
chr6	130708522	130708523	chunk0171_362_1	82.7907	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	130708439	130708838	-40097141	-	MSTB1	LTR	ERVL-MaLR	0	432	5	3
chr6	130749568	130749569	chunk0171_363_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	130748971	130750014	-40055965	-	LTR27E	LTR	ERV1	0	1077	1	3
chr6	130964598	130964599	chunk0171_377_1	8.27376	AR_DHT_Control	chr6	130964364	130964608	-39841371	+	MIRb	SINE	MIR	10	267	-1	3
chr6	130985276	130985277	chunk0171_378_1	4.4788	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	130985013	130985625	-39820354	+	LTR27B	LTR	ERV1	1	594	0	3
chr6	131100065	131100066	chunk0171_383_1	12.8792	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	131099131	131100752	-39705227	-	L1PA8A	LINE	L1	-1	6130	4494	3
chr6	131108990	131108991	chunk0171_384_1	75.4904	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	131108912	131109197	-39696782	-	MLT1A0	LTR	ERVL-MaLR	-4	361	4	3
chr6	131112431	131112432	chunk0171_386_1	7.47579	AR_DHT_Control	chr6	131112247	131112496	-39693483	-	L1MB7	LINE	L1	0	6184	5927	3
chr6	131116831	131116832	chunk0171_387_1	42.7606	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	131116730	131116905	-39689074	+	MER53	DNA	hAT	1	193	0	3
chr6	131213874	131213875	chunk0171_396_1	17.9161	AR_DHT_Control	chr6	131213350	131214217	-39591762	+	LTR101_Mam	LTR	ERVL	13	826	-3	3
chr6	131226131	131226132	chunk0171_398_1	128.7403	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	131225958	131226223	-39579756	+	MER102c	DNA	hAT-Charlie	73	331	0	3
chr6	131234339	131234340	chunk0171_401_1	68.55727	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	131234204	131234555	-39571424	-	L2b	LINE	L2	-4	3371	3009	3
chr6	131258480	131258481	chunk0171_404_1	89.38856	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	131258438	131258746	-39547233	+	LTR106_Mam	LTR	LTR	187	502	-206	3
chr6	131311675	131311676	chunk0171_411_1	11.32279	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	131310590	131312489	-39493490	+	L1M4	LINE	L1	2593	4596	-1550	3
chr6	131459175	131459176	chunk0171_416_1	123.7566	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	131459033	131459252	-39346727	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr6	131467840	131467841	chunk0171_417_1	11.1716	AR_DHT_Control	chr6	131466877	131468084	-39337895	+	L1PA15	LINE	L1	4934	6158	-7	3
chr6	131486171	131486172	chunk0171_420_1	55.91784	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	131485731	131486186	-39319793	-	L1M2c	LINE	L1	-6308	481	4	3
chr6	131541420	131541421	chunk0171_424_1	22.94306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	131538256	131541931	-39264048	+	L1PA7	LINE	L1	5	3678	-2783	3
chr6	131557212	131557213	chunk0171_426_1	11.1716	AR_DHT_Control	chr6	131556917	131557299	-39248680	-	L4_B_Mam	LINE	RTE-X	-153	4788	4388	3
chr6	131629849	131629850	chunk0171_429_1	4.15381	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	131629663	131629917	-39176062	-	HAL1	LINE	L1	-1678	829	573	3
chr6	131682591	131682592	chunk0171_435_1	97.68005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	131682515	131682689	-39123290	-	L1ME4a	LINE	L1	-386	5738	5566	3
chr6	131717944	131717945	chunk0171_437_1	24.6101	AR_DHT_Control	chr6	131717771	131718118	-39087861	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr6	131744025	131744026	chunk0171_441_1	28.59346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	131743918	131744157	-39061822	-	MamRep137	DNA	TcMar-Tigger	-117	393	148	3
chr6	132171088	132171089	chunk0171_451_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	132170990	132171173	-38634806	-	HERVL40-int	LTR	ERVL	-4017	1513	1328	3
chr6	132210448	132210449	chunk0171_453_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	132204121	132211350	-38594629	-	L1PA16	LINE	L1	-3	6866	3	3
chr6	132286903	132286904	chunk0172_1_1	60.7469	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	132286475	132287077	-38518902	-	L1MD2	LINE	L1	-297	6062	5443	3
chr6	132443853	132443854	chunk0172_4_1	47.20522	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	132443846	132444328	-38361651	+	MER67D	LTR	ERV1	2	509	-5	3
chr6	132676168	132676169	chunk0172_10_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	132675484	132676458	-38129521	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	1	3
chr6	132856657	132856658	chunk0172_15_1	9.90105	AR_DHT_Control	chr6	132856651	132856852	-37949127	+	MIRb	SINE	MIR	15	227	-3	3
chr6	132965039	132965040	chunk0172_25_1	4.20062	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	132964705	132965291	-37840688	-	OldhAT1	DNA	hAT-Ac	-649	2199	1609	3
chr6	133548886	133548887	chunk0172_31_1	6.48643	AR_DHT_Control	chr6	133548757	133548965	-37257014	-	L2a	LINE	L2	-12	3414	3124	3
chr6	133947663	133947664	chunk0172_33_1	20.26052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	133946580	133948031	-36857948	-	ERVL-E-int	LTR	ERVL	-382	5285	3776	3
chr6	133975826	133975827	chunk0172_34_1	17.5977	AR_DHT_Control	chr6	133975675	133975926	-36830053	+	L1ME3E	LINE	L1	5943	6188	-54	3
chr6	134003810	134003811	chunk0172_40_1	20.15761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134003398	134004033	-36801946	-	L3	LINE	CR1	-96	4003	3290	3
chr6	134077125	134077126	chunk0172_49_1	87.6337	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	134076989	134077140	-36728839	+	L1MA8	LINE	L1	6130	6289	-2	3
chr6	134103230	134103231	chunk0172_50_1	29.89994	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134102839	134103365	-36702614	-	MER89	LTR	ERV1	0	559	1	3
chr6	134109807	134109808	chunk0172_53_1	23.8215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134109684	134109949	-36696030	-	Tigger3c	DNA	TcMar-Tigger	0	602	322	3
chr6	134175896	134175897	chunk0172_58_1	9.34168	AR_DHT_Control	chr6	134175873	134175942	-36630037	+	GA-rich	Low_complexity	Low_complexity	1	73	0	3
chr6	134186368	134186369	chunk0172_59_1	5.52722	AR_DHT_Control	chr6	134186132	134186812	-36619167	-	ERVL-B4-int	LTR	ERVL	-1	5713	5059	3
chr6	134287935	134287936	chunk0172_64_1	12.42144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	134287803	134287963	-36518016	-	LTR64	LTR	ERV1	-370	158	1	3
chr6	134301261	134301262	chunk0172_66_1	39.2816	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134300933	134301485	-36504494	-	L2	LINE	L2	-776	2643	2094	3
chr6	134361651	134361652	chunk0172_72_1	14.73006	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134361183	134361703	-36444276	+	L2a	LINE	L2	2820	3421	-5	3
chr6	134453831	134453832	chunk0172_79_1	5.48709	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	134453694	134453863	-36352116	-	MIRb	SINE	MIR	-40	228	2	3
chr6	134571924	134571925	chunk0172_86_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	134568410	134573009	-36232970	+	L1PB1	LINE	L1	2138	6859	-8	3
chr6	135027336	135027337	chunk0172_109_1	6.48643	AR_DHT_Control	chr6	135027264	135027469	-35778510	+	L1MC4	LINE	L1	2741	2991	-3223	3
chr6	135093559	135093560	chunk0172_115_1	13.8581	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	135093477	135093638	-35712341	+	MIRb	SINE	MIR	60	268	0	3
chr6	135109975	135109976	chunk0172_116_1	37.67861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	135109960	135110522	-35695457	+	LTR86C	LTR	ERVL	10	619	-2	3
chr6	135124649	135124650	chunk0172_119_1	77.81881	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	135124618	135124711	-35681268	+	MIRb	SINE	MIR	117	211	-57	3
chr6	135129547	135129548	chunk0172_121_1	5.6503	AR_DHT_Control	chr6	135129320	135129695	-35676284	+	LTR16D	LTR	ERVL	222	568	0	3
chr6	135295643	135295644	chunk0172_133_1	10.9705	AR_DHT_Control	chr6	135295540	135295652	-35510327	+	L1ME1	LINE	L1	5673	5784	-380	3
chr6	135494599	135494600	chunk0172_144_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	135494471	135494628	-35311351	+	MIRb	SINE	MIR	111	268	0	3
chr6	135586473	135586474	chunk0172_147_1	27.42281	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	135586144	135586512	-35219467	-	L2a	LINE	L2	0	3426	2998	3
chr6	135603603	135603604	chunk0172_148_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	135602894	135604878	-35201101	+	MER52A	LTR	ERV1	3	1755	0	3
chr6	135765261	135765262	chunk0172_154_1	40.6935	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	135764975	135765472	-35040507	-	L1ME1	LINE	L1	-2226	3920	3392	3
chr6	135799259	135799260	chunk0172_156_1	19.3	AR_DHT_Control	chr6	135798826	135799389	-35006590	+	L1MEc	LINE	L1	39	590	-5810	3
chr6	136231547	136231548	chunk0172_170_1	7.36432	AR_DHT_Control	chr6	136231504	136231583	-34574396	-	L2a	LINE	L2	0	3426	3340	3
chr6	136351792	136351793	chunk0172_174_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	136351707	136352190	-34453789	+	LTR41	LTR	ERVL	1	620	-148	3
chr6	136699604	136699605	chunk0172_205_1	5.87933	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	136699109	136699612	-34106367	+	L2	LINE	L2	2473	3018	-401	3
chr6	136707840	136707841	chunk0172_206_1	11.9613	AR_DHT_Control	chr6	136707733	136708196	-34097783	+	L1ME4b	LINE	L1	448	892	0	3
chr6	136883470	136883471	chunk0172_218_1	39.1548	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	136883327	136883487	-33922492	+	L2-3_Crp	LINE	L2	755	913	-1183	3
chr6	136983974	136983975	chunk0172_222_1	7.62275	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	136983561	136984922	-33821057	+	MER45R	DNA	hAT-Tip100	2	1341	-240	3
chr6	137005056	137005057	chunk0172_223_1	11.0019	AR_DHT_Control	chr6	137005014	137005251	-33800728	-	Tigger19b	DNA	TcMar-Tigger	-43	507	254	3
chr6	137045353	137045354	chunk0172_225_1	22.2024	AR_DHT_Control	chr6	137045242	137045773	-33760206	-	Tigger3b	DNA	TcMar-Tigger	0	1231	699	3
chr6	137047227	137047228	chunk0172_226_1	198.8635	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137047030	137047577	-33758402	+	LTR50	LTR	ERVL	56	621	-174	3
chr6	137072975	137072976	chunk0172_229_1	41.0506	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137069832	137076310	-33729669	+	L1PA7	LINE	L1	2	6468	-1	3
chr6	137105081	137105082	chunk0172_233_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	137105039	137105254	-33700725	+	ERVL-int	LTR	ERVL	4061	4282	-1475	3
chr6	137122783	137122784	chunk0172_237_1	77.54243	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137122749	137123768	-33682211	+	LTR37-int	LTR	ERV1	2117	3147	-913	3
chr6	137174917	137174918	chunk0172_243_1	5.402	AR_DHT_Control	chr6	137174807	137175528	-33630451	+	L2a	LINE	L2	2628	3421	-5	3
chr6	137309408	137309409	chunk0172_252_1	6.3126	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	137309334	137309531	-33496448	-	MLT1I	LTR	ERVL-MaLR	-121	290	98	3
chr6	137336903	137336904	chunk0172_254_1	66.3613	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	137336738	137336995	-33468984	-	L1MC2	LINE	L1	-377	5967	5693	3
chr6	137371228	137371229	chunk0172_257_1	11.453	AR_DHT_Control	chr6	137371173	137376212	-33429767	-	MER57A-int	LTR	ERV1	0	6187	1089	3
chr6	137371951	137371952	chunk0172_258_1	66.3801	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137371173	137376212	-33429767	-	MER57A-int	LTR	ERV1	0	6187	1089	3
chr6	137546607	137546608	chunk0172_266_1	126.6442	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137546228	137546785	-33259194	+	L1ME4b	LINE	L1	256	828	-64	3
chr6	137589292	137589293	chunk0172_274_1	4.09493	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137588304	137592558	-33213421	+	L1PB4	LINE	L1	190	4342	-2573	3
chr6	137593397	137593398	chunk0172_275_1	4.93365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	137592919	137594538	-33211441	-	THE1B-int	LTR	ERVL-MaLR	0	1580	2	3
chr6	137645007	137645008	chunk0172_276_1	20.61308	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137644370	137645103	-33160876	-	L1MA4A	LINE	L1	-10	6992	6199	3
chr6	137726473	137726474	chunk0172_281_1	15.74419	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137726356	137726599	-33079380	-	MIRb	SINE	MIR	-6	262	8	3
chr6	137823291	137823292	chunk0172_289_1	38.3571	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137823044	137823342	-32982637	+	L1ME4a	LINE	L1	5792	6111	-13	3
chr6	137838350	137838351	chunk0172_291_1	10.1634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	137837313	137842804	-32963175	-	L1PB1	LINE	L1	0	6867	1341	3
chr6	137942799	137942800	chunk0172_296_1	42.3425	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	137942680	137943042	-32862937	-	MLT1C	LTR	ERVL-MaLR	0	467	5	3
chr6	138133376	138133377	chunk0172_303_1	6.54004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	138131742	138133710	-32672269	-	L1M1	LINE	L1	-2533	5032	3040	3
chr6	138401289	138401290	chunk0172_327_1	97.9283	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	138401084	138401807	-32404172	+	L1MB8	LINE	L1	5452	6178	0	3
chr6	138451957	138451958	chunk0172_331_1	49.8863	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	138451910	138451961	-32354018	+	MIRb	SINE	MIR	65	120	-148	3
chr6	138645424	138645425	chunk0172_337_1	17.8936	AR_DHT_Control	chr6	138645239	138645497	-32160482	+	L2a	LINE	L2	2984	3279	-147	3
chr6	138807955	138807956	chunk0172_341_1	29.7889	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	138807781	138808234	-31997745	-	L1ME3B	LINE	L1	-1258	4888	4414	3
chr6	139069160	139069161	chunk0172_354_1	8.09329	AR_DHT_Control	chr6	139068907	139069277	-31736702	+	MER95	LTR	ERV1	14	392	-39	3
chr6	139318586	139318587	chunk0172_376_1	21.0751	AR_DHT_Control	chr6	139318297	139318799	-31487180	+	L1MEg	LINE	L1	890	1470	-4614	3
chr6	139376943	139376944	chunk0172_380_1	16.1717	AR_DHT_Control	chr6	139376879	139377438	-31428541	-	L2c	LINE	L2	-1	3374	2711	3
chr6	139512186	139512187	chunk0172_386_1	14.91543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	139512022	139512212	-31293767	-	L1ME3E	LINE	L1	-850	5392	5215	3
chr6	139643885	139643886	chunk0172_392_1	8.84892	AR_DHT_Control	chr6	139643717	139643896	-31162083	+	MIRb	SINE	MIR	40	239	-29	3
chr6	139677202	139677203	chunk0172_393_1	8.58634	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	139676540	139677403	-31128576	+	L1MC3	LINE	L1	6898	7785	0	3
chr6	139679296	139679297	chunk0172_394_1	5.99997	AR_DHT_Control	chr6	139679117	139679398	-31126581	+	L1ME3D	LINE	L1	5665	5980	-262	3
chr6	139691107	139691108	chunk0172_395_1	11.5684	AR_DHT_Control	chr6	139691063	139691139	-31114840	+	Tigger16b	DNA	TcMar-Tigger	255	309	-27	3
chr6	139961427	139961428	chunk0172_400_1	14.54794	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	139961420	139961459	-30844520	+	GA-rich	Low_complexity	Low_complexity	1	39	0	3
chr6	140106010	140106011	chunk0172_412_1	7.36432	AR_DHT_Control	chr6	140105712	140106295	-30699684	-	L1MCa	LINE	L1	-5764	744	196	3
chr6	140125718	140125719	chunk0172_414_1	21.5912	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	140125687	140125875	-30680104	-	MIRb	SINE	MIR	-23	245	75	3
chr6	140166333	140166334	chunk0172_416_1	10.1791	AR_DHT_Control	chr6	140165882	140166784	-30639195	-	L1MB4	LINE	L1	-6	6174	5258	3
chr6	140427714	140427715	chunk0172_422_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	140425951	140428263	-30377716	-	L1M1	LINE	L1	-3977	3588	1121	3
chr6	140717169	140717170	chunk0172_427_1	10.1791	AR_DHT_Control	chr6	140716269	140718413	-30087566	-	L1M4b	LINE	L1	-4621	2246	17	3
chr6	140749636	140749637	chunk0172_430_1	41.6179	AR_DHT_Control	chr6	140748558	140750160	-30055819	+	L1M1	LINE	L1	1458	3117	-4448	3
chr6	140777619	140777620	chunk0172_434_1	15.42159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	140777291	140777692	-30028287	+	L1MEg	LINE	L1	1741	2183	-4232	3
chr6	140833741	140833742	chunk0172_439_1	54.9609	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	140833077	140835208	-29970771	+	ERVL-B4-int	LTR	ERVL	3288	5485	-229	3
chr6	140834484	140834485	chunk0172_440_1	6.26417	AR_DHT_Control	chr6	140833077	140835208	-29970771	+	ERVL-B4-int	LTR	ERVL	3288	5485	-229	3
chr6	140982045	140982046	chunk0172_445_1	72.8913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	140982026	140982055	-29823924	+	(AAAAC)n	Simple_repeat	Simple_repeat	1	29	0	3
chr6	141153626	141153627	chunk0173_4_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	141153479	141154098	-29651881	+	MER21C	LTR	ERVL	1	580	-358	3
chr6	141233848	141233849	chunk0173_10_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	141233847	141234409	-29571570	-	L1ME3A	LINE	L1	-8	6165	5621	3
chr6	141330015	141330016	chunk0173_15_1	14.26978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	141329917	141330923	-29475056	-	L1MEd	LINE	L1	-2302	3844	2719	3
chr6	141404083	141404084	chunk0173_16_1	114.6222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	141403283	141405210	-29400769	+	LOR1-int	LTR	ERV1	13	1797	-6323	3
chr6	141421132	141421133	chunk0173_19_1	5.6425	AR_DHT_Control	chr6	141420832	141421243	-29384736	-	L1ME3A	LINE	L1	-84	6690	6259	3
chr6	141775943	141775944	chunk0173_24_1	8.2993	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	141774923	141776748	-29029231	+	L1PA14	LINE	L1	4376	6158	-3	3
chr6	141995286	141995287	chunk0173_28_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	141994003	141997105	-28808874	+	L1M2	LINE	L1	721	3687	-3875	3
chr6	142000253	142000254	chunk0173_29_1	57.7778	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	142000000	142000567	-28805412	+	L1MA4A	LINE	L1	4937	5530	-773	3
chr6	142196150	142196151	chunk0173_36_1	4.33257	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	142194212	142196619	-28609360	-	L1MEc	LINE	L1	-1415	4904	2177	3
chr6	142207547	142207548	chunk0173_37_1	17.60769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	142206982	142207801	-28598178	+	L1MA4	LINE	L1	1238	2134	-4431	3
chr6	142276472	142276473	chunk0173_40_1	58.48136	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	142276422	142276605	-28529374	+	MIRb	SINE	MIR	22	237	-31	3
chr6	142308220	142308221	chunk0173_46_1	152.7363	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	142308138	142308365	-28497614	-	MIRb	SINE	MIR	-1	267	26	3
chr6	142385681	142385682	chunk0173_61_1	8.22827	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	142385426	142385889	-28420090	-	MER113	DNA	hAT-Charlie	-22	499	4	3
chr6	142513840	142513841	chunk0173_65_1	8.27376	AR_DHT_Control	chr6	142512942	142517311	-28288668	-	L1PB1	LINE	L1	-363	6504	2098	3
chr6	142592509	142592510	chunk0173_70_1	73.8546	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	142592432	142593249	-28212730	+	L1ME2z	LINE	L1	4204	5048	-1098	3
chr6	142659927	142659928	chunk0173_75_1	50.43	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	142659298	142660361	-28145618	-	LTR37-int	LTR	ERV1	-18	4042	2973	3
chr6	143048355	143048356	chunk0173_94_1	12.6941	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143045655	143049061	-27756918	+	L1MC2	LINE	L1	3039	6517	-2	3
chr6	143076237	143076238	chunk0173_95_1	12.0219	AR_DHT_Control	chr6	143075599	143076673	-27729306	-	L1MD1	LINE	L1	-3009	3535	2432	3
chr6	143079060	143079061	chunk0173_97_1	16.37464	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	143078913	143079105	-27726874	-	L1MD1	LINE	L1	-5818	822	623	3
chr6	143124389	143124390	chunk0173_98_1	6.48643	AR_DHT_Control	chr6	143124126	143124591	-27681388	+	LTR41B	LTR	ERVL	24	556	-202	3
chr6	143155955	143155956	chunk0173_99_1	5.07296	AR_DHT_Control	chr6	143155799	143156035	-27649944	-	L2c	LINE	L2	-492	2927	2671	3
chr6	143162818	143162819	chunk0173_101_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	143162638	143162995	-27642984	-	MER115	DNA	hAT-Tip100	-279	414	51	3
chr6	143220211	143220212	chunk0173_102_1	26.4576	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143220111	143220455	-27585524	+	L2a	LINE	L2	3031	3426	0	3
chr6	143268060	143268061	chunk0173_104_1	10.9091	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143267888	143268184	-27537795	+	Charlie19a	DNA	hAT-Charlie	30	351	-35	3
chr6	143622388	143622389	chunk0173_115_1	7.52431	AR_DHT_Control	chr6	143622289	143622520	-27183459	+	L2c	LINE	L2	3128	3377	-10	3
chr6	143642691	143642692	chunk0173_123_1	13.838	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	143642499	143642948	-27163031	+	MLT1C	LTR	ERVL-MaLR	1	465	-2	3
chr6	143689142	143689143	chunk0173_126_1	4.96282	AR_DHT_Control	chr6	143688398	143689395	-27116584	+	L2a	LINE	L2	2339	3426	0	3
chr6	143721848	143721849	chunk0173_129_1	36.4042	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	143721792	143721892	-27084087	-	L2b	LINE	L2	-21	3354	3258	3
chr6	143774448	143774449	chunk0173_136_1	23.9312	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143774426	143774630	-27031349	-	MER58A	DNA	hAT-Charlie	0	224	10	3
chr6	143880697	143880698	chunk0173_139_1	45.3509	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	143880584	143880798	-26925181	-	MER58A	DNA	hAT-Charlie	-6	218	2	3
chr6	143953592	143953593	chunk0173_143_1	4.79451	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143953572	143953971	-26852008	+	HAL1	LINE	L1	8	440	-2067	3
chr6	143980835	143980836	chunk0173_144_1	12.4482	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	143979293	143980877	-26825102	-	L1MEc	LINE	L1	-4023	2377	696	3
chr6	144135004	144135005	chunk0173_148_1	42.4992	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	144134837	144135632	-26670347	+	L1MC2	LINE	L1	5424	6235	-109	3
chr6	144283787	144283788	chunk0173_156_1	12.71349	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	144283748	144283942	-26522037	+	L2c	LINE	L2	3200	3387	0	3
chr6	144783478	144783479	chunk0173_179_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	144783440	144783734	-26022245	-	L1MA5	LINE	L1	-6	6294	6000	3
chr6	144915529	144915530	chunk0173_185_1	55.4467	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	144915327	144917751	-25888228	+	L1PB3	LINE	L1	2395	4811	-1335	3
chr6	145102567	145102568	chunk0173_186_1	4.88599	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	145102317	145102575	-25703404	-	MIR	SINE	MIR	-2	260	7	3
chr6	145111337	145111338	chunk0173_187_1	24.018	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	145111254	145111365	-25694614	+	MLT1K	LTR	ERVL-MaLR	475	586	-9	3
chr6	145143164	145143165	chunk0173_189_1	155.7514	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	145143155	145143397	-25662582	-	MIRb	SINE	MIR	-10	258	1	3
chr6	145168637	145168638	chunk0173_191_1	12.3389	AR_DHT_Control	chr6	145167842	145168945	-25637034	+	L1MEd	LINE	L1	11	1150	-5936	3
chr6	145190131	145190132	chunk0173_192_1	5.73594	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	145189622	145191328	-25614651	-	MER31-int	LTR	ERV1	-694	4242	2458	3
chr6	145250367	145250368	chunk0173_197_1	64.9848	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	145249663	145250380	-25555599	-	L1ME4b	LINE	L1	-38	854	80	3
chr6	145267383	145267384	chunk0173_200_1	124.6788	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	145266947	145267448	-25538531	-	LTR40a	LTR	ERVL	0	519	4	3
chr6	145363041	145363042	chunk0173_204_1	39.37368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	145362342	145364480	-25441499	+	L1ME4b	LINE	L1	3787	6020	-1930	3
chr6	145380497	145380498	chunk0173_205_1	14.2141	AR_DHT_Control	chr6	145379852	145380732	-25425247	+	L1M4	LINE	L1	3122	4134	-2012	3
chr6	145484683	145484684	chunk0173_209_1	62.2086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	145484510	145484735	-25321244	+	MIRb	SINE	MIR	12	256	-6	3
chr6	145513921	145513922	chunk0173_211_1	6.48643	AR_DHT_Control	chr6	145513848	145514161	-25291818	-	MLT1I	LTR	ERVL-MaLR	0	411	66	3
chr6	145520883	145520884	chunk0173_212_1	7.36432	AR_DHT_Control	chr6	145520693	145520934	-25285045	-	L2a	LINE	L2	-129	3297	3028	3
chr6	145584181	145584182	chunk0173_213_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	145582479	145584928	-25221051	-	L1PA15	LINE	L1	-4341	2444	1	3
chr6	145588684	145588685	chunk0173_216_1	14.9157	AR_DHT_Control	chr6	145588656	145588719	-25217260	-	L2a	LINE	L2	-2	3424	3359	3
chr6	145850045	145850046	chunk0173_219_1	38.5092	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	145849632	145850104	-24955875	-	MLT2B1	LTR	ERVL	0	520	1	3
chr6	146186591	146186592	chunk0173_227_1	11.3499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146186277	146186626	-24619353	-	MLT1I-int	LTR	ERVL-MaLR	-906	481	125	3
chr6	146373571	146373572	chunk0173_230_1	50.0676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146373217	146373613	-24432366	-	MSTA	LTR	ERVL-MaLR	0	428	1	3
chr6	146411010	146411011	chunk0173_231_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146410990	146411696	-24394283	-	L2c	LINE	L2	0	3387	2658	3
chr6	146542774	146542775	chunk0173_232_1	12.83631	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	146542639	146543178	-24262801	+	L1MA9	LINE	L1	5064	5616	-696	3
chr6	146626660	146626661	chunk0173_234_1	13.1127	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146625843	146627129	-24178850	-	L1MEc	LINE	L1	-4010	2390	988	3
chr6	146637686	146637687	chunk0173_235_1	21.64595	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146637511	146637790	-24168189	+	L1MEg	LINE	L1	297	605	-5479	3
chr6	146671278	146671279	chunk0173_237_1	9.21264	AR_DHT_Control	chr6	146670803	146671861	-24134118	-	L2c	LINE	L2	-123	3264	2043	3
chr6	146779802	146779803	chunk0173_238_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146779264	146781045	-24024934	+	L1M4	LINE	L1	1441	3335	-3309	3
chr6	146812784	146812785	chunk0173_239_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146812282	146813026	-23992953	-	LTR34	LTR	ERV1	-1	698	3	3
chr6	146833243	146833244	chunk0173_240_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	146833050	146834243	-23971736	+	L1MD2	LINE	L1	184	1346	-5194	3
chr6	146866901	146866902	chunk0173_244_1	43.5728	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	146866659	146866976	-23939003	-	MamGypLTR3a	LTR	Gypsy	-1	980	684	3
chr6	146923747	146923748	chunk0173_248_1	101.9514	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	146923164	146923975	-23882004	+	L1MEc	LINE	L1	29	906	-5494	3
chr6	147049669	147049670	chunk0173_253_1	20.4543	AR_DHT_Control	chr6	147048889	147049732	-23756247	+	L2a	LINE	L2	2233	3168	-258	3
chr6	147133560	147133561	chunk0173_259_1	7.36432	AR_DHT_Control	chr6	147133359	147134772	-23671207	+	L1MA9	LINE	L1	4870	6312	0	3
chr6	147152713	147152714	chunk0173_260_1	5.44099	AR_DHT_Control	chr6	147152678	147153041	-23652938	+	L2c	LINE	L2	2918	3272	-115	3
chr6	147179949	147179950	chunk0173_264_1	104.58705	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	147179657	147180021	-23625958	+	L3	LINE	CR1	3120	3520	-579	3
chr6	147192485	147192486	chunk0173_267_1	21.8457	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	147192396	147192602	-23613377	+	MER58A	DNA	hAT-Charlie	33	224	0	3
chr6	147328325	147328326	chunk0173_270_1	5.6425	AR_DHT_Control	chr6	147328155	147328387	-23477592	-	Charlie17a	DNA	hAT-Charlie	0	217	1	3
chr6	147909729	147909730	chunk0173_282_1	63.8423	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	147909661	147909832	-22896147	+	MER58B	DNA	hAT-Charlie	171	341	0	3
chr6	148258009	148258010	chunk0173_288_1	155.317	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	148257927	148258064	-22547915	+	L2c	LINE	L2	3265	3387	0	3
chr6	148488604	148488605	chunk0173_305_1	8.27376	AR_DHT_Control	chr6	148487925	148489850	-22316129	-	L1MB3	LINE	L1	0	6183	4256	3
chr6	148649522	148649523	chunk0173_319_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	148649123	148649553	-22156426	-	MER57A1	LTR	ERV1	0	432	1	3
chr6	148659579	148659580	chunk0173_320_1	17.75919	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	148659379	148660556	-22145423	+	L1MA8	LINE	L1	5092	6287	-4	3
chr6	148660141	148660142	chunk0173_322_1	7.08133	AR_DHT_Control	chr6	148659379	148660556	-22145423	+	L1MA8	LINE	L1	5092	6287	-4	3
chr6	148709835	148709836	chunk0173_324_1	35.7068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	148709699	148709986	-22095993	-	L2c	LINE	L2	0	3387	3093	3
chr6	148887827	148887828	chunk0173_333_1	134.7357	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	148887677	148887860	-21918119	+	Charlie18a	DNA	hAT-Charlie	134	329	-13	3
chr6	148916133	148916134	chunk0173_337_1	110.4871	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	148916122	148916327	-21889652	-	MIR	SINE	MIR	0	262	40	3
chr6	149103007	149103008	chunk0173_353_1	95.5883	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	149102655	149103527	-21702452	+	L1PB4	LINE	L1	5483	6330	-782	3
chr6	149151823	149151824	chunk0173_356_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	149150908	149152878	-21653101	+	ERV3-16A3_I-int	LTR	ERVL	3223	5226	0	3
chr6	149333078	149333079	chunk0173_359_1	44.106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	149332974	149333129	-21472850	+	L2c	LINE	L2	3200	3386	-1	3
chr6	149349702	149349703	chunk0173_360_1	6.48643	AR_DHT_Control	chr6	149349437	149349721	-21456258	-	Tigger9b	DNA	TcMar-Tigger	-310	314	4	3
chr6	149388017	149388018	chunk0173_365_1	27.99994	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	149387816	149388075	-21417904	-	L1ME4b	LINE	L1	-277	615	337	3
chr6	149461757	149461758	chunk0173_370_1	7.67158	AR_DHT_Control	chr6	149461574	149461789	-21344190	-	L2a	LINE	L2	0	3426	3225	3
chr6	149499335	149499336	chunk0173_372_1	16.73939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	149498844	149499443	-21306536	+	L1MD1	LINE	L1	5206	5823	-419	3
chr6	149503732	149503733	chunk0173_373_1	6.75904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	149503643	149504588	-21301391	+	L1MEc	LINE	L1	519	1517	-4883	3
chr6	149532485	149532486	chunk0173_374_1	13.09573	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	149532302	149532585	-21273394	-	HAL1M8	LINE	L1	-1479	1512	1231	3
chr6	149789628	149789629	chunk0173_378_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	149789546	149789717	-21016262	+	L1ME4b	LINE	L1	693	850	-42	3
chr6	149860912	149860913	chunk0173_381_1	21.9109	AR_DHT_Control	chr6	149860826	149861008	-20944971	+	MIR	SINE	MIR	56	254	-8	3
chr6	149993567	149993568	chunk0173_384_1	34.1176	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	149992745	149994635	-20811344	-	L1PA16	LINE	L1	-3	6163	4249	3
chr6	150157790	150157791	chunk0173_391_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	150157503	150157955	-20648024	-	MSTB2	LTR	ERVL-MaLR	0	457	15	3
chr6	150748450	150748451	chunk0173_406_1	6.10347	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	150748441	150748507	-20057472	+	L2a	LINE	L2	3355	3422	-4	3
chr6	151233121	151233122	chunk0173_429_1	223.658	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	151232919	151233573	-19572406	-	L1MD1	LINE	L1	0	6242	5585	3
chr6	151563286	151563287	chunk0173_443_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	151562614	151564036	-19241943	-	L1PA17	LINE	L1	-5446	1769	348	3
chr6	151568730	151568731	chunk0173_444_1	17.0044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	151568545	151569065	-19236914	-	L1ME4b	LINE	L1	-77	815	263	3
chr6	151764134	151764135	chunk0173_452_1	10.1791	AR_DHT_Control	chr6	151764106	151764221	-19041758	-	MER81	DNA	hAT-Blackjack	0	114	1	3
chr6	152013515	152013516	chunk0174_1_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	152013464	152013541	-18792438	-	L1MA5A	LINE	L1	-3	6294	6215	3
chr6	153044710	153044711	chunk0174_21_1	14.99192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	153044601	153044839	-17761140	-	MamTip2	DNA	hAT-Tip100	-14	291	26	3
chr6	153166275	153166276	chunk0174_22_1	10.8296	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	153166220	153166403	-17639576	+	L4_B_Mam	LINE	RTE-X	237	429	-4512	3
chr6	153502537	153502538	chunk0174_26_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	153501877	153502778	-17303201	+	L1MEd	LINE	L1	3630	4620	-1526	3
chr6	153602778	153602779	chunk0174_27_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	153602697	153602848	-17203131	+	L1MC4a	LINE	L1	7723	7882	0	3
chr6	153832667	153832668	chunk0174_29_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	153832599	153832892	-16973087	+	(ACACAT)n	Simple_repeat	Simple_repeat	1	296	0	3
chr6	154415622	154415623	chunk0174_37_1	124.37665	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	154415530	154415699	-16390280	+	MIR	SINE	MIR	73	244	-18	3
chr6	154569674	154569675	chunk0174_41_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	154569630	154569856	-16236123	+	MIRc	SINE	MIR	19	253	-15	3
chr6	154699009	154699010	chunk0174_46_1	28.8328	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	154698651	154699132	-16106847	+	L1MEh	LINE	L1	1230	1761	-474	3
chr6	154732239	154732240	chunk0174_47_1	15.825	AR_DHT_Control	chr6	154731766	154732264	-16073715	-	L2a	LINE	L2	-246	3180	2608	3
chr6	155016161	155016162	chunk0174_56_1	17.42093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	155016006	155016318	-15789661	+	L1ME3G	LINE	L1	199	541	-383	3
chr6	155044272	155044273	chunk0174_58_1	5.6425	AR_DHT_Control	chr6	155044205	155044311	-15761668	-	MIRc	SINE	MIR	-152	116	5	3
chr6	155806704	155806705	chunk0174_65_1	7.69414	AR_DHT_Control	chr6	155806529	155807360	-14998619	+	L1ME2	LINE	L1	7386	8213	-2	3
chr6	156241267	156241268	chunk0174_78_1	101.3506	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	156241173	156241371	-14564608	+	MLT1B	LTR	ERVL-MaLR	227	390	0	3
chr6	156310960	156310961	chunk0174_79_1	9.11386	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	156310778	156311273	-14494706	-	L2a	LINE	L2	-234	3192	2695	3
chr6	156470005	156470006	chunk0174_85_1	14.1125	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	156469522	156471036	-14334943	+	L1MA4A	LINE	L1	4756	6298	-5	3
chr6	156969465	156969466	chunk0174_110_1	44.5776	AR_DHT_Control	chr6	156969354	156969489	-13836490	-	MamSINE1	SINE	tRNA-RTE	-79	211	79	3
chr6	156997517	156997518	chunk0174_111_1	28.9709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	156997451	156997642	-13808337	-	MIRc	SINE	MIR	-7	261	56	3
chr6	157076431	157076432	chunk0174_113_1	18.74299	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	157076295	157076438	-13729541	-	FRAM	SINE	Alu	0	176	49	3
chr6	157417597	157417598	chunk0174_133_1	19.96284	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	157417332	157417603	-13388376	-	L1ME4b	LINE	L1	-215	677	395	3
chr6	157443999	157444000	chunk0174_134_1	5.6425	AR_DHT_Control	chr6	157443989	157444163	-13361816	-	MIRb	SINE	MIR	-8	260	38	3
chr6	157779723	157779724	chunk0174_148_1	5.6425	AR_DHT_Control	chr6	157779563	157779736	-13026243	+	MIRb	SINE	MIR	39	216	-52	3
chr6	157848151	157848152	chunk0174_151_1	45.8539	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	157848051	157848231	-12957748	+	L2a	LINE	L2	3215	3416	-10	3
chr6	157852112	157852113	chunk0174_154_1	10.6235	AR_DHT_Control	chr6	157851888	157852227	-12953752	-	L1MB4	LINE	L1	-275	5905	5534	3
chr6	158142835	158142836	chunk0174_157_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	158142774	158143047	-12662932	+	L2b	LINE	L2	3103	3375	0	3
chr6	158152660	158152661	chunk0174_159_1	26.5484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	158152532	158152945	-12653034	+	Tigger3c	DNA	TcMar-Tigger	157	602	0	3
chr6	158335708	158335709	chunk0174_160_1	17.6003	AR_DHT_Control	chr6	158335371	158336540	-12469439	-	L1MC4	LINE	L1	-1610	6272	5038	3
chr6	158456447	158456448	chunk0174_164_1	46.21973	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	158456297	158456512	-12349467	+	MER30	DNA	hAT-Charlie	1	230	0	3
chr6	158468199	158468200	chunk0174_165_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	158467977	158468448	-12337531	-	LTR22B	LTR	ERVK	-3	489	5	3
chr6	158575147	158575148	chunk0174_167_1	46.64541	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	158574790	158575202	-12230777	-	MLT2B4	LTR	ERVL	-63	493	1	3
chr6	159716240	159716241	chunk0174_179_1	42.9742	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	159716167	159716546	-11089433	-	MLT1L	LTR	ERVL-MaLR	-6	604	215	3
chr6	159927115	159927116	chunk0174_186_1	6.18182	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	159926798	159927205	-10878774	+	MLT2B4	LTR	ERVL	1	526	-41	3
chr6	159996822	159996823	chunk0174_190_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	159996499	159997814	-10808165	-	L1PA17	LINE	L1	-5621	1252	2	3
chr6	160007633	160007634	chunk0174_194_1	27.5762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	160007566	160007702	-10798277	-	L1MEh	LINE	L1	-861	1374	1236	3
chr6	160279039	160279040	chunk0174_206_1	72.05792	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	160278552	160279329	-10526650	+	L2a	LINE	L2	2509	3400	-26	3
chr6	160391507	160391508	chunk0174_215_1	6.39136	AR_DHT_Control	chr6	160391405	160391606	-10414373	-	MIRb	SINE	MIR	-11	257	28	3
chr6	160400597	160400598	chunk0174_217_1	60.87047	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	160400110	160400655	-10405324	+	L1MC1	LINE	L1	354	823	-5685	3
chr6	160418563	160418564	chunk0174_220_1	6.0927	AR_DHT_Control	chr6	160418021	160418571	-10387408	+	MLT2B3	LTR	ERVL	3	554	0	3
chr6	160518377	160518378	chunk0174_228_1	16.4778	AR_DHT_Control	chr6	160518164	160518399	-10287580	-	MER50	LTR	ERV1	-500	234	1	3
chr6	160553412	160553413	chunk0174_229_1	85.3288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	160552651	160553905	-10252074	-	L1ME2	LINE	L1	-3814	2505	1183	3
chr6	160687350	160687351	chunk0174_233_1	16.1385	AR_DHT_Control	chr6	160686655	160687701	-10118278	+	L1MA5A	LINE	L1	5221	6291	-6	3
chr6	160699643	160699644	chunk0174_234_1	49.97303	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	160699166	160700187	-10105792	+	Tigger2b_Pri	DNA	TcMar-Tigger	2	1068	0	3
chr6	160812422	160812423	chunk0174_237_1	13.2288	AR_DHT_Control	chr6	160811826	160812470	-9993509	-	Tigger17a	DNA	TcMar-Tigger	-1	653	1	3
chr6	160954522	160954523	chunk0174_239_1	232.3301	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	160954460	160954820	-9851159	+	L2a	LINE	L2	3045	3426	0	3
chr6	160964261	160964262	chunk0174_241_1	62.8038	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	160964156	160964366	-9841613	+	L5	LINE	RTE-X	2007	2246	-19	3
chr6	160967516	160967517	chunk0174_242_1	23.28758	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	160967478	160967631	-9838348	+	MIRb	SINE	MIR	65	223	-45	3
chr6	161001662	161001663	chunk0174_246_1	37.55646	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	161001467	161001669	-9804310	+	L2a	LINE	L2	3181	3386	-40	3
chr6	161004769	161004770	chunk0174_248_1	13.15976	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	161004182	161005092	-9800887	-	MER92-int	LTR	ERV1	-1690	2640	1661	3
chr6	161062835	161062836	chunk0174_254_1	52.1595	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	161062055	161064105	-9741874	-	L1M8	LINE	L1	-215	2140	3	3
chr6	161068352	161068353	chunk0174_255_1	10.9285	AR_DHT_Control	chr6	161068061	161068434	-9737545	-	L2c	LINE	L2	0	3387	3027	3
chr6	161122296	161122297	chunk0174_256_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	161121591	161124979	-9681000	-	L1PB1	LINE	L1	-360	6507	3050	3
chr6	161331543	161331544	chunk0174_266_1	51.012	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	161330911	161331695	-9474284	+	MER4-int	LTR	ERV1	1194	2329	-3617	3
chr6	161395247	161395248	chunk0174_268_1	22.79025	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	161395020	161395539	-9410440	-	L1ME4b	LINE	L1	-6	886	339	3
chr6	161473252	161473253	chunk0174_272_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	161472360	161473290	-9332689	+	L1M3	LINE	L1	4840	5788	-524	3
chr6	161644792	161644793	chunk0174_277_1	73.5071	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	161644658	161644924	-9161055	+	MLT1K	LTR	ERVL-MaLR	313	593	-2	3
chr6	162103566	162103567	chunk0174_287_1	43.488	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	162103324	162103568	-8702411	+	L1M5	LINE	L1	3781	4015	-2131	3
chr6	162641597	162641598	chunk0174_295_1	77.7223	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	162639719	162642878	-8163101	-	LTR37-int	LTR	ERV1	-1	4059	744	3
chr6	162646837	162646838	chunk0174_297_1	4.83532	AR_DHT_Control	chr6	162646621	162646956	-8159023	-	Tigger3a	DNA	TcMar-Tigger	-11	337	1	3
chr6	162656905	162656906	chunk0174_299_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	162656791	162657165	-8148814	+	L2a	LINE	L2	3035	3426	0	3
chr6	162662369	162662370	chunk0174_300_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	162662250	162662859	-8143120	-	L1PB4	LINE	L1	-825	5321	4717	3
chr6	162678511	162678512	chunk0174_301_1	5.6425	AR_DHT_Control	chr6	162677792	162678782	-8127197	-	L1ME1	LINE	L1	0	6179	5185	3
chr6	162683322	162683323	chunk0174_302_1	4.92181	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	162683196	162683364	-8122615	-	MER3	DNA	hAT-Charlie	0	209	11	3
chr6	162696019	162696020	chunk0174_303_1	91.5944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	162695859	162696066	-8109913	+	MIRb	SINE	MIR	26	257	-11	3
chr6	162760170	162760171	chunk0174_311_1	11.6341	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	162759882	162760262	-8045717	-	LTR16A1	LTR	ERVL	0	456	61	3
chr6	162916702	162916703	chunk0174_314_1	3.58429	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	162916589	162916942	-7889037	-	L1ME2	LINE	L1	-5432	1064	695	3
chr6	163494467	163494468	chunk0174_323_1	182.8721	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	163494412	163494685	-7311294	+	Tigger17c	DNA	TcMar-Tigger	23	291	-897	3
chr6	163533659	163533660	chunk0174_326_1	92.0075	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr6	163533431	163533711	-7272268	-	MER119	DNA	hAT-Charlie	-204	379	93	3
chr6	163793171	163793172	chunk0174_335_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	163792989	163794438	-7011541	+	MER110-int	LTR	ERV1	218	1598	-3049	3
chr6	164204041	164204042	chunk0174_344_1	33.1793	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	164203581	164204169	-6601810	+	L1ME4c	LINE	L1	44	658	-266	3
chr6	164253624	164253625	chunk0174_347_1	6.84874	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	164253499	164253995	-6551984	+	LTR86A2	LTR	ERVL	6	508	0	3
chr6	164283287	164283288	chunk0174_348_1	40.1276	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	164282679	164283665	-6522314	+	L2a	LINE	L2	2012	3047	-372	3
chr6	164436513	164436514	chunk0174_356_1	6.48643	AR_DHT_Control	chr6	164436209	164436575	-6369404	-	L2c	LINE	L2	-93	3294	2923	3
chr6	164470630	164470631	chunk0174_357_1	29.75559	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	164470369	164470793	-6335186	-	MER57C2	LTR	ERV1	0	434	1	3
chr6	164497953	164497954	chunk0174_359_1	47.9215	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	164497757	164498408	-6307571	-	L1M5	LINE	L1	-1754	4392	3665	3
chr6	164647059	164647060	chunk0174_365_1	4.75321	AR_DHT_Control	chr6	164646893	164648420	-6157559	+	L1M2	LINE	L1	3177	4727	-2835	3
chr6	164740311	164740312	chunk0174_368_1	9.63462	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	164740272	164741119	-6064860	+	MLT1J1-int	LTR	ERVL-MaLR	447	1373	-14	3
chr6	164820157	164820158	chunk0174_370_1	92.4865	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	164818472	164822156	-5983823	+	L1MA2	LINE	L1	1321	5068	-2497	3
chr6	164881831	164881832	chunk0174_373_1	56.9325	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	164881796	164881981	-5923998	-	L1MDa	LINE	L1	-6427	206	23	3
chr6	164925801	164925802	chunk0174_376_1	7.26348	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	164925531	164926267	-5879712	+	(CA)n	Simple_repeat	Simple_repeat	1	748	0	3
chr6	164964713	164964714	chunk0174_378_1	12.2728	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	164964598	164964772	-5841207	+	MARNA	DNA	TcMar-Mariner	91	265	-321	3
chr6	165028573	165028574	chunk0174_383_1	27.3192	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	165028545	165028618	-5777361	-	MLT2D	LTR	ERVL	-35	525	447	3
chr6	165070064	165070065	chunk0174_384_1	9.40261	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165068515	165070971	-5735008	+	L1MC2	LINE	L1	3596	6098	-421	3
chr6	165081798	165081799	chunk0174_385_1	5.82105	AR_DHT_Control	chr6	165081569	165082086	-5723893	+	L1ME2	LINE	L1	5655	6211	-233	3
chr6	165249473	165249474	chunk0174_388_1	50.3338	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	165249228	165249712	-5556267	-	L1ME2	LINE	L1	-5019	1396	815	3
chr6	165359744	165359745	chunk0174_391_1	7.36432	AR_DHT_Control	chr6	165359736	165359922	-5446057	-	MER58C	DNA	hAT-Charlie	-22	193	2	3
chr6	165468564	165468565	chunk0174_396_1	162.3159	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165468385	165468578	-5337401	+	Tigger1	DNA	TcMar-Tigger	2225	2414	-4	3
chr6	165552430	165552431	chunk0174_400_1	197.1679	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165552273	165552819	-5253160	+	MER68	LTR	ERVL	1	563	0	3
chr6	165567165	165567166	chunk0174_403_1	11.4177	AR_DHT_Control	chr6	165566833	165567314	-5238665	+	L1ME3A	LINE	L1	5524	6027	-146	3
chr6	165634751	165634752	chunk0174_407_1	18.0848	AR_DHT_Control	chr6	165634482	165634800	-5171179	-	L4_A_Mam	LINE	RTE-X	-12	4978	4660	3
chr6	165647894	165647895	chunk0174_411_1	62.2196	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	165647843	165647901	-5158078	-	MIR	SINE	MIR	-38	224	167	3
chr6	165684060	165684061	chunk0174_415_1	7.53305	AR_DHT_Control	chr6	165683891	165684320	-5121659	+	L2a	LINE	L2	2960	3414	-12	3
chr6	165806100	165806101	chunk0174_417_1	14.23523	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165806081	165806223	-4999756	-	Tigger11a	DNA	TcMar-Tigger	-475	260	108	3
chr6	165919619	165919620	chunk0174_424_1	15.30733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165919481	165919713	-4886266	-	MER58C	DNA	hAT-Charlie	-2	213	4	3
chr6	165925504	165925505	chunk0174_425_1	7.03714	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	165924707	165926058	-4879921	+	L1MD2	LINE	L1	4931	6349	-10	3
chr6	166032911	166032912	chunk0174_429_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	166032432	166033556	-4772423	+	L1M4a2	LINE	L1	1	1117	-1539	3
chr6	166059827	166059828	chunk0174_432_1	26.05433	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	166059573	166061097	-4744882	-	L1P3	LINE	L1	-578	5590	4062	3
chr6	166061712	166061713	chunk0174_433_1	6.22495	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	166061097	166062623	-4743356	-	MSTD-int	LTR	ERVL-MaLR	-266	1469	1	3
chr6	166096805	166096806	chunk0174_439_1	9.70412	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	166094305	166096897	-4709082	-	L1PA13	LINE	L1	-518	5645	3117	3
chr6	166660561	166660562	chunk0175_312_1	80.7576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	166660454	166660651	-4145328	-	L2b	LINE	L2	-6	3420	3227	3
chr6	166836758	166836759	chunk0175_319_1	49.2049	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	166836600	166836770	-3969209	-	L1ME3	LINE	L1	-1449	2002	1881	3
chr6	166874447	166874448	chunk0175_320_1	6.39934	AR_DHT_Control	chr6	166874136	166874475	-3931504	-	L2a	LINE	L2	-76	3350	2966	3
chr6	166875341	166875342	chunk0175_321_1	45.424	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	166874949	166875526	-3930453	+	L1M5	LINE	L1	4460	5075	-1071	3
chr6	166992894	166992895	chunk0175_325_1	117.3014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	166992672	166992940	-3813039	-	LTR16C	LTR	ERVL	-214	275	1	3
chr6	167031257	167031258	chunk0175_328_1	85.96333	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	167031229	167031498	-3774481	+	L2c	LINE	L2	3000	3383	-4	3
chr6	167100955	167100956	chunk0175_329_1	5.86499	AR_DHT_Control	chr6	167100660	167101114	-3704865	-	LTR47A	LTR	ERVL	0	452	1	3
chr6	167238157	167238158	chunk0175_337_1	5.6425	AR_DHT_Control	chr6	167238061	167238615	-3567364	+	LTR1C3	LTR	ERV1	1	638	0	3
chr6	167449587	167449588	chunk0175_342_1	6.89429	AR_DHT_Control	chr6	167449371	167449770	-3356209	+	MER49	LTR	ERV1	1	398	-525	3
chr6	167491601	167491602	chunk0175_345_1	61.76532	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	167491539	167491622	-3314357	+	L2b	LINE	L2	3293	3416	-10	3
chr6	167590511	167590512	chunk0175_351_1	5.6425	AR_DHT_Control	chr6	167590205	167591393	-3214586	+	(CAC)n	Simple_repeat	Simple_repeat	1	1207	0	3
chr6	167651860	167651861	chunk0175_352_1	10.0817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	167651396	167652230	-3153749	+	(GT)n	Simple_repeat	Simple_repeat	1	872	0	3
chr6	167728643	167728644	chunk0175_354_1	21.5529	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	167728397	167729451	-3076528	+	L1MC2	LINE	L1	4781	5909	-435	3
chr6	167738104	167738105	chunk0175_356_1	14.1972	AR_DHT_Control	chr6	167738032	167738170	-3067809	+	L2b	LINE	L2	3231	3386	-1	3
chr6	167809216	167809217	chunk0175_360_1	17.93002	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	167809069	167811715	-2994264	+	L1ME3B	LINE	L1	3366	6143	-21	3
chr6	167840076	167840077	chunk0175_363_1	62.75266	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	167839937	167840219	-2965760	-	L2b	LINE	L2	-28	3347	3075	3
chr6	167881133	167881134	chunk0175_365_1	165.8843	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	167880762	167881186	-2924793	-	L1M5	LINE	L1	-1288	4858	4426	3
chr6	167883317	167883318	chunk0175_368_1	6.39136	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	167883237	167883323	-2922656	+	HAL1	LINE	L1	2281	2371	-136	3
chr6	167952684	167952685	chunk0175_372_1	12.0293	AR_DHT_Control	chr6	167952523	167952716	-2853263	-	MER58A	DNA	hAT-Charlie	-3	221	22	3
chr6	168139680	168139681	chunk0175_378_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	168139667	168139776	-2666203	+	L2a	LINE	L2	3267	3376	-50	3
chr6	168788767	168788768	chunk0175_412_1	18.94119	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	168787843	168788919	-2017060	-	HAL1	LINE	L1	-846	1661	602	3
chr6	168898693	168898694	chunk0175_420_1	24.62503	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	168898691	168899225	-1906754	-	L2b	LINE	L2	-253	3173	2657	3
chr6	168954121	168954122	chunk0175_426_1	64.5426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	168953321	168954340	-1851639	-	L1ME1	LINE	L1	-145	6034	5039	3
chr6	169038846	169038847	chunk0175_428_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	169037379	169039667	-1766312	+	L1PB4	LINE	L1	3852	6155	-1	3
chr6	169461730	169461731	chunk0175_429_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	169460914	169462167	-1343812	+	L1MB3	LINE	L1	2459	3750	-2626	3
chr6	169469784	169469785	chunk0175_430_1	31.44644	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr6	169469120	169470442	-1335537	-	MLT1B-int	LTR	ERVL-MaLR	-1	1370	1	3
chr6	169617865	169617866	chunk0175_434_1	9.21264	AR_DHT_Control	chr6	169617675	169618012	-1187967	-	LTR9	LTR	ERV1	-303	309	1	3
chr6	169944605	169944606	chunk0175_443_1	16.02583	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	169943331	169944756	-861223	+	L1ME1	LINE	L1	1	1535	-4973	3
chr6	170068676	170068677	chunk0175_446_1	5.89231	SRA057177_Lncap_AR_DHT_10nm_4hr	chr6	170068394	170068766	-737213	+	MLT1B	LTR	ERVL-MaLR	20	389	-1	3
chr6	170140521	170140522	chunk0175_449_1	32.7322	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr6	170140201	170141066	-664913	+	Tigger3b	DNA	TcMar-Tigger	1	894	-337	3
chr6	170276834	170276835	chunk0175_455_1	6.73207	AR_DHT_Control	chr6	170276711	170276883	-529096	-	Tigger19a	DNA	TcMar-Tigger	-35	288	127	3
chr7	82155	82156	chunk0175_2_1	7.69414	AR_DHT_Control	chr7	82047	82177	-159263796	+	(CACACC)n	Simple_repeat	Simple_repeat	1	132	0	3
chr7	122145	122146	chunk0175_4_1	48.8905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	122121	123030	-159222943	+	L1M5	LINE	L1	2780	3705	-2441	3
chr7	137591	137592	chunk0175_7_1	115.3887	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	137433	137836	-159208137	-	LTR56	LTR	ERV1	0	445	1	3
chr7	214634	214635	chunk0175_12_1	35.881	AR_DHT_Control	chr7	214580	214699	-159131274	+	MIR3	SINE	MIR	61	187	-21	3
chr7	618789	618790	chunk0175_22_1	25.07342	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	618629	618995	-158726978	-	L1M5	LINE	L1	-760	5434	5053	3
chr7	624981	624982	chunk0175_24_1	5.9729	AR_DHT_Control	chr7	624710	625724	-158720249	+	L1MC	LINE	L1	2481	3356	-2790	3
chr7	705607	705608	chunk0175_26_1	28.1801	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	705334	705745	-158640228	+	L1ME1	LINE	L1	5672	6090	-325	3
chr7	1070621	1070622	chunk0175_42_1	6.9031	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	1070467	1071030	-158274943	+	(CACACA)n	Simple_repeat	Simple_repeat	1	567	0	3
chr7	1097373	1097374	chunk0175_44_1	232.9825	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	1097189	1098106	-158247867	+	L1MC4	LINE	L1	6702	7777	-265	3
chr7	1176296	1176297	chunk0175_47_1	4.63316	AR_DHT_Control	chr7	1175827	1176361	-158169612	-	ERV3-16A3_I-int	LTR	ERVL	-2364	2632	2061	3
chr7	1653916	1653917	chunk0175_54_1	7.42373	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	1653761	1654145	-157691828	+	(CA)n	Simple_repeat	Simple_repeat	1	386	0	3
chr7	1659875	1659876	chunk0175_56_1	33.24543	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	1659706	1660144	-157685829	+	L1MB7	LINE	L1	5496	5941	-243	3
chr7	1773729	1773730	chunk0175_58_1	13.1909	AR_DHT_Control	chr7	1773092	1773796	-157572177	-	L1MA7	LINE	L1	-805	5486	4766	3
chr7	1790237	1790238	chunk0175_59_1	9.21264	AR_DHT_Control	chr7	1790136	1790338	-157555635	+	L1MEc	LINE	L1	3003	3193	-3126	3
chr7	1888209	1888210	chunk0175_61_1	5.08478	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	1887832	1888857	-157457116	+	(TGTG)n	Simple_repeat	Simple_repeat	3	1023	0	3
chr7	1927034	1927035	chunk0175_63_1	19.3204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	1925697	1927916	-157418057	+	L1MDa	LINE	L1	3303	5636	-905	3
chr7	2029456	2029457	chunk0175_66_1	12.6172	AR_DHT_Control	chr7	2029394	2029566	-157316407	+	L1ME3	LINE	L1	5984	6169	-4	3
chr7	2091891	2091892	chunk0175_68_1	13.6601	AR_DHT_Control	chr7	2091792	2092254	-157253719	-	L1MC3	LINE	L1	-1930	5855	5390	3
chr7	2173059	2173060	chunk0175_72_1	13.2531	AR_DHT_Control	chr7	2173036	2173807	-157172166	-	HAL1	LINE	L1	-14	2493	1665	3
chr7	2193489	2193490	chunk0175_73_1	54.22263	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	2193431	2193534	-157152439	+	L2b	LINE	L2	3261	3370	-5	3
chr7	2196543	2196544	chunk0175_75_1	38.18765	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	2196523	2196634	-157149339	+	L2b	LINE	L2	3259	3374	-1	3
chr7	2315903	2315904	chunk0175_79_1	5.40567	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	2314816	2316847	-157029126	+	(CACT)n	Simple_repeat	Simple_repeat	1	2135	0	3
chr7	2403028	2403029	chunk0175_82_1	6.04605	AR_DHT_Control	chr7	2402974	2403144	-156942829	-	MIRb	SINE	MIR	-14	254	83	3
chr7	2456967	2456968	chunk0175_86_1	57.9789	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	2456589	2457174	-156888799	-	L1M4a2	LINE	L1	-1224	1432	876	3
chr7	2805975	2805976	chunk0175_96_1	29.2016	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	2805876	2806163	-156539810	+	MER33	DNA	hAT-Charlie	25	324	0	3
chr7	2847316	2847317	chunk0175_101_1	8.09329	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	2847274	2847381	-156498592	+	AluJr	SINE	Alu	176	282	-30	3
chr7	2860755	2860756	chunk0175_104_1	326.0441	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	2860601	2860778	-156485195	-	MLT1I	LTR	ERVL-MaLR	-117	294	112	3
chr7	2982202	2982203	chunk0175_106_1	9.72299	AR_DHT_Control	chr7	2982045	2982236	-156363737	-	L1ME1	LINE	L1	-343	5836	5622	3
chr7	3028160	3028161	chunk0175_107_1	7.22694	AR_DHT_Control	chr7	3028005	3028175	-156317798	-	MIR	SINE	MIR	-36	232	37	3
chr7	3250850	3250851	chunk0175_113_1	9.25776	AR_DHT_Control	chr7	3250744	3251410	-156094563	+	Tigger1	DNA	TcMar-Tigger	227	880	-1538	3
chr7	3373703	3373704	chunk0175_128_1	6.63476	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	3373667	3374100	-155971873	+	L1ME4a	LINE	L1	4399	4894	-1506	3
chr7	3507145	3507146	chunk0175_138_1	9.01771	AR_DHT_Control	chr7	3507013	3507357	-155838616	-	L1MEf	LINE	L1	-5688	712	350	3
chr7	3520396	3520397	chunk0175_140_1	180.1072	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	3520367	3520486	-155825487	+	MamSINE1	SINE	tRNA-RTE	1	125	-165	3
chr7	3527542	3527543	chunk0175_142_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	3527175	3527575	-155818398	-	L2a	LINE	L2	-12	3414	2937	3
chr7	3545066	3545067	chunk0175_143_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	3544723	3545108	-155800865	-	MLT1I	LTR	ERVL-MaLR	-6	405	1	3
chr7	3667911	3667912	chunk0175_147_1	11.58733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	3667470	3668012	-155677961	-	L1ME1	LINE	L1	-40	6139	5585	3
chr7	3670959	3670960	chunk0175_148_1	5.9729	AR_DHT_Control	chr7	3670869	3671124	-155674849	+	L2b	LINE	L2	3104	3315	-60	3
chr7	3711367	3711368	chunk0175_152_1	56.9741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	3711309	3711835	-155634138	-	L2a	LINE	L2	-36	3390	2819	3
chr7	3871078	3871079	chunk0175_156_1	22.8391	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	3870941	3871446	-155474527	-	L1MCa	LINE	L1	-1534	5472	4968	3
chr7	4317562	4317563	chunk0175_163_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	4317121	4317832	-155028141	+	L1ME4a	LINE	L1	5405	6122	-2	3
chr7	4524817	4524818	chunk0175_164_1	17.32481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	4524541	4524841	-154821132	+	AluJo	SINE	Alu	1	297	-15	3
chr7	4744513	4744514	chunk0175_171_1	8.35541	AR_DHT_Control	chr7	4744256	4744606	-154601367	-	L1PA17	LINE	L1	-4	6162	5800	3
chr7	4888233	4888234	chunk0175_174_1	18.51776	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	4888194	4888362	-154457611	+	L2a	LINE	L2	3215	3426	0	3
chr7	5200471	5200472	chunk0175_177_1	169.3974	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	5200346	5200535	-154145438	-	L1MD1	LINE	L1	-16	6343	6088	3
chr7	5514295	5514296	chunk0175_192_1	15.0481	AR_DHT_Control	chr7	5513926	5514323	-153831650	+	L2a	LINE	L2	2921	3426	0	3
chr7	5586387	5586388	chunk0175_195_1	119.68299	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	5586114	5586409	-153759564	+	AluSz6	SINE	Alu	1	310	-2	3
chr7	5693185	5693186	chunk0175_198_1	12.3979	AR_DHT_Control	chr7	5693118	5693338	-153652635	+	MER58A	DNA	hAT-Charlie	4	224	0	3
chr7	6012599	6012600	chunk0175_205_1	5.33602	AR_DHT_Control	chr7	6012561	6012851	-153333122	-	AluSx1	SINE	Alu	-16	296	1	3
chr7	6021006	6021007	chunk0175_207_1	49.95268	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	6020439	6021197	-153324776	+	Tigger2	DNA	TcMar-Tigger	880	1713	-1005	3
chr7	6127024	6127025	chunk0175_216_1	7.19831	AR_DHT_Control	chr7	6126777	6127866	-153218107	-	L1MDa	LINE	L1	-611	6139	4932	3
chr7	6238579	6238580	chunk0175_221_1	74.103	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	6238575	6238874	-153107099	+	L1MC1	LINE	L1	6034	6332	-1	3
chr7	6264787	6264788	chunk0175_224_1	15.94794	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	6264745	6265183	-153080790	-	L2a	LINE	L2	-4	3422	2918	3
chr7	6470608	6470609	chunk0175_237_1	42.0923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	6470197	6470832	-152875141	+	MER6	DNA	TcMar-Tigger	32	651	-214	3
chr7	6479362	6479363	chunk0175_239_1	32.01679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	6479147	6479454	-152866519	-	AluJb	SINE	Alu	0	312	1	3
chr7	6482501	6482502	chunk0175_240_1	17.2756	AR_DHT_Control	chr7	6482493	6482588	-152863385	-	Tigger15a	DNA	TcMar-Tigger	-589	126	41	3
chr7	6562396	6562397	chunk0175_243_1	5.6425	AR_DHT_Control	chr7	6562165	6562530	-152783443	-	L1MC	LINE	L1	-2000	5785	5423	3
chr7	7023264	7023265	chunk0175_245_1	14.5159	AR_DHT_Control	chr7	7023162	7024453	-152321520	-	L1PA11	LINE	L1	0	6174	4868	3
chr7	7023937	7023938	chunk0175_246_1	36.4056	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	7023162	7024453	-152321520	-	L1PA11	LINE	L1	0	6174	4868	3
chr7	7120714	7120715	chunk0175_257_1	13.197	AR_DHT_Control	chr7	7120671	7120845	-152225128	+	MLT1M	LTR	ERVL-MaLR	115	286	-386	3
chr7	7562919	7562920	chunk0175_276_1	53.65852	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	7562913	7563035	-151782938	-	MamGypsy2-LTR	LTR	Gypsy	-9	174	45	3
chr7	7642360	7642361	chunk0175_283_1	7.09019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	7642143	7642445	-151703528	-	AluJo	SINE	Alu	-21	291	14	3
chr7	7687122	7687123	chunk0175_284_1	201.6104	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	7686766	7687143	-151658830	+	MLT1J	LTR	ERVL-MaLR	124	512	0	3
chr7	7781119	7781120	chunk0175_292_1	35.28329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	7780475	7781131	-151564842	-	L1ME3A	LINE	L1	-1	6172	5536	3
chr7	7914689	7914690	chunk0175_303_1	28.56098	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	7914679	7914740	-151431233	-	L2c	LINE	L2	-222	3153	3087	3
chr7	8035155	8035156	chunk0176_1_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	8034581	8035212	-151310761	+	L1PA17	LINE	L1	13	642	-6231	3
chr7	8090684	8090685	chunk0176_2_1	11.15045	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	8090664	8090851	-151255122	+	MER58A	DNA	hAT-Charlie	11	205	-19	3
chr7	8099027	8099028	chunk0176_4_1	20.9659	AR_DHT_Control	chr7	8096324	8102268	-151243705	+	L1PA7	LINE	L1	408	6464	-5	3
chr7	8191335	8191336	chunk0176_8_1	65.3053	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	8191294	8191672	-151154301	+	MER47A	DNA	TcMar-Tigger	1	366	0	3
chr7	8199939	8199940	chunk0176_9_1	8.82835	AR_DHT_Control	chr7	8199737	8200212	-151145761	+	L1MA2	LINE	L1	5827	6304	0	3
chr7	8240414	8240415	chunk0176_13_1	97.7213	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	8239428	8245573	-151100400	+	L1PA6	LINE	L1	178	6327	0	3
chr7	8278246	8278247	chunk0176_14_1	4.66817	AR_DHT_Control	chr7	8278151	8278248	-151067725	+	MER5A	DNA	hAT-Charlie	90	188	-1	3
chr7	8409033	8409034	chunk0176_22_1	10.2531	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	8408804	8409093	-150936880	-	Charlie23a	DNA	hAT-Charlie	-1	338	37	3
chr7	9322479	9322480	chunk0176_26_1	55.5517	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	9322343	9322729	-150023244	-	MER54A	LTR	ERVL	-19	882	501	3
chr7	9339297	9339298	chunk0176_30_1	17.61184	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	9339003	9340460	-150005513	-	L1ME2	LINE	L1	-7	6157	4617	3
chr7	9366626	9366627	chunk0176_32_1	17.72448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	9363732	9369452	-149976521	+	L1PA15	LINE	L1	280	6012	-834	3
chr7	9592245	9592246	chunk0176_35_1	28.26673	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	9591181	9593121	-149752852	+	L1PA15	LINE	L1	4750	6691	-1	3
chr7	9598752	9598753	chunk0176_36_1	106.18477	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	9598527	9599224	-149746749	+	L1MC4	LINE	L1	7359	8042	0	3
chr7	9889830	9889831	chunk0176_38_1	7.3092	AR_DHT_Control	chr7	9889169	9891511	-149454462	+	L1MA2	LINE	L1	12	2392	-5173	3
chr7	10045018	10045019	chunk0176_39_1	82.1225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	10044877	10046486	-149299487	-	L1MC3	LINE	L1	-2	7783	6162	3
chr7	10757208	10757209	chunk0176_43_1	12.2633	AR_DHT_Control	chr7	10757191	10757337	-148588636	-	UCON78	DNA	DNA	-93	350	204	3
chr7	10875333	10875334	chunk0176_46_1	31.2607	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	10874763	10875362	-148470611	-	MER90a	LTR	ERV1	0	614	1	3
chr7	11029735	11029736	chunk0176_49_1	53.5386	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	11029319	11029746	-148316227	+	Charlie1b	DNA	hAT-Charlie	45	500	-23	3
chr7	11131056	11131057	chunk0176_53_1	49.5293	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	11130513	11131895	-148214078	-	L1MC2	LINE	L1	-24	6320	4904	3
chr7	11193070	11193071	chunk0176_55_1	6.26854	AR_DHT_Control	chr7	11193018	11193694	-148152279	+	MER61-int	LTR	ERV1	1	700	-4517	3
chr7	11229647	11229648	chunk0176_65_1	26.42213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	11229280	11229702	-148116271	-	L1ME4a	LINE	L1	-67	6057	5644	3
chr7	11248436	11248437	chunk0176_68_1	5.18585	AR_DHT_Control	chr7	11248393	11248448	-148097525	+	(TG)n	Simple_repeat	Simple_repeat	1	55	0	3
chr7	11253027	11253028	chunk0176_70_1	28.46414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	11252764	11253207	-148092766	-	LTR40b	LTR	ERVL	0	462	3	3
chr7	11261529	11261530	chunk0176_73_1	79.0233	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	11261519	11261874	-148084099	+	LTR57	LTR	ERVL	1	397	-14	3
chr7	11295128	11295129	chunk0176_74_1	13.7525	AR_DHT_Control	chr7	11295073	11295402	-148050571	+	MLT1H2	LTR	ERVL-MaLR	211	546	-3	3
chr7	11391796	11391797	chunk0176_77_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	11389460	11392052	-147953921	-	L1PA7	LINE	L1	-3831	2630	8	3
chr7	11497829	11497830	chunk0176_83_1	14.97583	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	11497659	11499971	-147846002	+	L1PA12	LINE	L1	7	3632	-3909	3
chr7	11507019	11507020	chunk0176_86_1	43.51612	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	11506456	11507089	-147838884	+	L2a	LINE	L2	2746	3426	0	3
chr7	11557765	11557766	chunk0176_87_1	17.693	AR_DHT_Control	chr7	11554791	11558331	-147787642	-	L1MDa	LINE	L1	-2691	3846	17	3
chr7	11673803	11673804	chunk0176_101_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	11672980	11674969	-147671004	+	L1PA17	LINE	L1	1	2062	-4873	3
chr7	11781444	11781445	chunk0176_111_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	11781158	11781458	-147564515	+	AluJr	SINE	Alu	1	295	-17	3
chr7	11858840	11858841	chunk0176_112_1	7.14391	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	11858581	11859024	-147486949	-	L1ME3Cz	LINE	L1	-243	754	287	3
chr7	11946875	11946876	chunk0176_113_1	39.5183	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	11944036	11946971	-147399002	-	L1PA13	LINE	L1	-20	6763	3846	3
chr7	12001247	12001248	chunk0176_116_1	42.21003	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	12001060	12001494	-147344479	-	Charlie10	DNA	hAT-Charlie	0	2822	2359	3
chr7	12220867	12220868	chunk0176_123_1	77.8241	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	12220340	12220956	-147125017	+	L1MC5a	LINE	L1	3	629	-2148	3
chr7	12267775	12267776	chunk0176_126_1	29.9421	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	12267752	12267870	-147078103	+	MER113	DNA	hAT-Charlie	132	248	-273	3
chr7	12630753	12630754	chunk0176_131_1	9.19742	AR_DHT_Control	chr7	12630736	12630830	-146715143	-	MIRb	SINE	MIR	-145	123	33	3
chr7	12788327	12788328	chunk0176_141_1	59.3695	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	12787943	12788374	-146557599	+	Tigger3b	DNA	TcMar-Tigger	1	435	-796	3
chr7	12942756	12942757	chunk0176_147_1	22.2525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	12942534	12942769	-146403204	+	MIRc	SINE	MIR	7	256	-12	3
chr7	13098356	13098357	chunk0176_151_1	96.22623	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	13098346	13098512	-146247461	-	AluJr	SINE	Alu	-8	304	136	3
chr7	13421096	13421097	chunk0176_163_1	27.9147	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	13421057	13421138	-145924835	-	MLT1I	LTR	ERVL-MaLR	-257	154	72	3
chr7	13422386	13422387	chunk0176_164_1	5.96639	AR_DHT_Control	chr7	13421608	13426749	-145919224	+	L1M4	LINE	L1	639	5608	-1234	3
chr7	13432415	13432416	chunk0176_166_1	31.21571	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	13432395	13432518	-145913455	+	AmnSINE1	SINE	5S-Deu-L2	208	327	-248	3
chr7	13543650	13543651	chunk0176_168_1	8.62865	AR_DHT_Control	chr7	13543606	13544196	-145801777	+	L1ME3	LINE	L1	1838	2454	-3692	3
chr7	13875056	13875057	chunk0176_186_1	7.20445	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	13874874	13875185	-145470788	+	L3	LINE	CR1	1522	1822	-2277	3
chr7	14050985	14050986	chunk0176_195_1	35.7084	AR_DHT_Control	chr7	14050819	14051027	-145294946	+	L1PA11	LINE	L1	5949	6156	-18	3
chr7	14085669	14085670	chunk0176_196_1	51.5776	AR_DHT_Control	chr7	14084345	14086074	-145259899	-	L1MEg2	LINE	L1	-4921	2720	1153	3
chr7	14095359	14095360	chunk0176_198_1	28.19893	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	14095337	14095560	-145250413	+	L2	LINE	L2	2011	2235	-1184	3
chr7	14670701	14670702	chunk0176_201_1	9.63462	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	14670613	14670778	-144675195	-	L1MA9	LINE	L1	-73	6098	5930	3
chr7	14778201	14778202	chunk0176_215_1	58.7742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	14778161	14778313	-144567660	+	MIR3	SINE	MIR	16	203	-5	3
chr7	14887337	14887338	chunk0176_216_1	36.2956	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	14887119	14887625	-144458348	+	L2a	LINE	L2	1893	2452	-967	3
chr7	15011750	15011751	chunk0176_221_1	55.86292	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	15011404	15011860	-144334113	+	L2a	LINE	L2	2974	3426	0	3
chr7	15109286	15109287	chunk0176_222_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	15109139	15109615	-144236358	+	MLT2F	LTR	ERVL	17	502	-161	3
chr7	15278160	15278161	chunk0176_225_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	15277354	15278246	-144067727	-	L1PA5	LINE	L1	-5139	2475	1641	3
chr7	15643865	15643866	chunk0176_229_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	15641388	15644385	-143701588	-	L1PA17	LINE	L1	-3759	3156	224	3
chr7	15779779	15779780	chunk0176_232_1	10.9481	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	15779713	15779880	-143566093	-	L1MEg	LINE	L1	-3688	2458	2285	3
chr7	15873765	15873766	chunk0176_235_1	31.2441	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	15873237	15873842	-143472131	-	LTR37-int	LTR	ERV1	-1402	2658	2021	3
chr7	16210400	16210401	chunk0176_252_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	16210300	16210710	-143135263	+	MLT1F2	LTR	ERVL-MaLR	1	499	-61	3
chr7	16271597	16271598	chunk0176_253_1	84.1043	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	16271504	16271928	-143074045	+	L2c	LINE	L2	2956	3382	-5	3
chr7	16313943	16313944	chunk0176_260_1	30.32574	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	16311742	16314260	-143031713	-	L1MC1	LINE	L1	-1120	5201	2563	3
chr7	16317127	16317128	chunk0176_262_1	7.32066	AR_DHT_Control	chr7	16317116	16317350	-143028623	+	MIR	SINE	MIR	5	248	-14	3
chr7	16343123	16343124	chunk0176_263_1	7.17788	AR_DHT_Control	chr7	16343122	16344283	-143001690	+	L1M4	LINE	L1	9	1185	-6332	3
chr7	16402390	16402391	chunk0176_264_1	54.6142	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	16401989	16402532	-142943441	+	L1MEd	LINE	L1	226	782	-6304	3
chr7	16426104	16426105	chunk0176_267_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	16425733	16427122	-142918851	-	L1MC1	LINE	L1	-644	5689	4266	3
chr7	16439266	16439267	chunk0176_269_1	18.1849	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	16438987	16439282	-142906691	+	MamRTE1	LINE	RTE-BovB	3381	3698	-114	3
chr7	16494001	16494002	chunk0176_271_1	8.32058	AR_DHT_Control	chr7	16493861	16494009	-142851964	+	MER130	DNA	DNA	1085	1243	-351	3
chr7	16495391	16495392	chunk0176_272_1	4.57744	AR_DHT_Control	chr7	16495372	16495727	-142850246	-	LTR16E1	LTR	ERVL	-1	537	167	3
chr7	16642904	16642905	chunk0176_282_1	11.2731	AR_DHT_Control	chr7	16642709	16642962	-142703011	-	Charlie29a	DNA	hAT-Charlie	-127	592	339	3
chr7	16652342	16652343	chunk0176_284_1	39.7099	AR_DHT_Control	chr7	16652271	16652406	-142693567	+	Charlie15b	DNA	hAT-Charlie	109	255	-806	3
chr7	16726166	16726167	chunk0176_289_1	5.12066	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	16725907	16726607	-142619366	-	LTR106_Mam	LTR	LTR	-9	699	19	3
chr7	16814345	16814346	chunk0176_300_1	17.4893	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	16814295	16814424	-142531549	-	L1MEd	LINE	L1	-6126	960	829	3
chr7	16844477	16844478	chunk0176_305_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	16844247	16844490	-142501483	-	L2b	LINE	L2	-225	3150	2918	3
chr7	16905401	16905402	chunk0176_311_1	15.71901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	16904069	16905810	-142440163	-	L1MEc	LINE	L1	-4412	1988	94	3
chr7	17016659	17016660	chunk0176_317_1	51.6005	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	17016508	17016681	-142329292	-	MamRTE1	LINE	RTE-BovB	-22	3790	3573	3
chr7	17032411	17032412	chunk0176_319_1	49.22612	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	17032119	17032440	-142313533	+	MamRTE1	LINE	RTE-BovB	3321	3644	-168	3
chr7	17039677	17039678	chunk0176_321_1	4.4788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	17039576	17039964	-142306009	+	LTR16C	LTR	ERVL	87	487	-2	3
chr7	17389885	17389886	chunk0176_334_1	11.1716	AR_DHT_Control	chr7	17389760	17389978	-141955995	+	Charlie1	DNA	hAT-Charlie	9	226	-2555	3
chr7	17432962	17432963	chunk0176_336_1	17.21065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	17432835	17433142	-141912831	-	L1M6	LINE	L1	-4591	1905	1588	3
chr7	17759368	17759369	chunk0176_345_1	5.6425	AR_DHT_Control	chr7	17758663	17759628	-141586345	+	L1PB3	LINE	L1	4095	5034	-1112	3
chr7	17777428	17777429	chunk0176_347_1	6.98475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	17777334	17777955	-141568018	+	L1ME2	LINE	L1	1617	2339	-4061	3
chr7	17781881	17781882	chunk0176_348_1	11.7067	AR_DHT_Control	chr7	17780467	17781920	-141564053	+	L1ME2	LINE	L1	4351	5875	-477	3
chr7	17815436	17815437	chunk0176_349_1	5.1	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	17815302	17815597	-141530376	+	AluJr4	SINE	Alu	2	295	-17	3
chr7	17845005	17845006	chunk0176_352_1	107.5788	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	17841593	17845124	-141500849	+	L1M4c	LINE	L1	811	4407	-1975	3
chr7	18110113	18110114	chunk0176_357_1	34.5874	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	18110045	18110160	-141235813	+	MARNA	DNA	TcMar-Mariner	404	517	-69	3
chr7	18396219	18396220	chunk0176_366_1	33.92674	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	18396163	18396389	-140949584	-	L2a	LINE	L2	-1	3425	3186	3
chr7	18441089	18441090	chunk0176_370_1	71.6367	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	18440972	18441107	-140904866	+	MIR3	SINE	MIR	35	172	-96	3
chr7	18522950	18522951	chunk0176_372_1	17.07366	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	18522883	18522996	-140822977	-	L2c	LINE	L2	-5	3382	3258	3
chr7	18549413	18549414	chunk0176_376_1	83.9096	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	18549263	18549594	-140796379	+	L1MD2	LINE	L1	5610	5934	-425	3
chr7	18602821	18602822	chunk0176_380_1	10.186	AR_DHT_Control	chr7	18601017	18602889	-140743084	-	L1MC2	LINE	L1	-1532	4789	2888	3
chr7	18780817	18780818	chunk0176_387_1	19.70747	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	18780745	18780819	-140565154	-	L2b	LINE	L2	0	3375	3286	3
chr7	18821052	18821053	chunk0176_391_1	6.35715	AR_DHT_Control	chr7	18820899	18821302	-140524671	-	MLT1A1	LTR	ERVL-MaLR	0	408	1	3
chr7	18857365	18857366	chunk0176_395_1	123.36972	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	18857365	18857440	-140488533	+	Charlie9	DNA	hAT-Charlie	2681	2757	0	3
chr7	19321629	19321630	chunk0176_410_1	18.45904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	19321612	19321696	-140024277	-	L1PA12	LINE	L1	0	6168	6080	3
chr7	19363489	19363490	chunk0176_413_1	6.33125	AR_DHT_Control	chr7	19363455	19364112	-139981861	-	L1ME2	LINE	L1	0	6337	5680	3
chr7	19364276	19364277	chunk0176_414_1	20.4575	AR_DHT_Control	chr7	19364100	19364434	-139981539	-	L1ME2	LINE	L1	-4152	2263	1933	3
chr7	19438466	19438467	chunk0176_422_1	24.24439	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	19438421	19438631	-139907342	-	MER58A	DNA	hAT-Charlie	-7	217	6	3
chr7	19739954	19739955	chunk0176_429_1	7.36432	AR_DHT_Control	chr7	19739583	19740490	-139605483	+	L1ME4b	LINE	L1	1	891	-1	3
chr7	19970526	19970527	chunk0176_438_1	51.0112	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	19969793	19970685	-139375288	+	L2a	LINE	L2	2434	3426	0	3
chr7	19987183	19987184	chunk0176_439_1	128.69596	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	19986991	19988411	-139357562	-	L1MB1	LINE	L1	-1102	5038	3608	3
chr7	20025733	20025734	chunk0176_447_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20024767	20026502	-139319471	+	L1PA7	LINE	L1	4415	6151	-3	3
chr7	20077547	20077548	chunk0176_448_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20077413	20077729	-139268244	-	Tigger3a	DNA	TcMar-Tigger	-1	347	1	3
chr7	20304621	20304622	chunk0177_2_1	28.4665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20304478	20304986	-139040987	+	MER67A	LTR	ERV1	4	539	-4	3
chr7	20393295	20393296	chunk0177_11_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20393163	20393362	-138952611	-	Tigger15a	DNA	TcMar-Tigger	-347	368	148	3
chr7	20475275	20475276	chunk0177_12_1	52.8904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20475108	20475299	-138870674	-	Tigger15a	DNA	TcMar-Tigger	-361	354	148	3
chr7	20594082	20594083	chunk0177_22_1	315.96831	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;AR_DHT_Control	chr7	20593973	20594559	-138751414	+	MamGypsy2-I	LTR	Gypsy	1003	1604	-2562	3
chr7	20692595	20692596	chunk0177_29_1	30.7358	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20692069	20692835	-138653138	+	L1ME1	LINE	L1	1360	2132	-4283	3
chr7	20729422	20729423	chunk0177_31_1	6.13992	AR_DHT_Control	chr7	20729360	20729531	-138616442	+	MARNA	DNA	TcMar-Mariner	15	178	-408	3
chr7	20896307	20896308	chunk0177_37_1	25.41227	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	20896298	20896325	-138449648	+	(TG)n	Simple_repeat	Simple_repeat	1	27	0	3
chr7	21049430	21049431	chunk0177_54_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	21049402	21049668	-138296305	+	MIRb	SINE	MIR	5	268	0	3
chr7	21086919	21086920	chunk0177_56_1	21.66663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21086511	21087175	-138258798	-	MLT1H1-int	LTR	ERVL-MaLR	-773	716	3	3
chr7	21121949	21121950	chunk0177_59_1	15.23479	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	21121832	21121984	-138223989	-	MIRb	SINE	MIR	-11	257	77	3
chr7	21163527	21163528	chunk0177_61_1	42.7608	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21163496	21163654	-138182319	-	L1M5	LINE	L1	-633	5491	5314	3
chr7	21202399	21202400	chunk0177_63_1	5.00158	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	21202045	21202623	-138143350	-	MLT1E1A	LTR	ERVL-MaLR	-1	679	3	3
chr7	21367297	21367298	chunk0177_71_1	13.53199	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21367162	21367317	-137978656	-	MER58A	DNA	hAT-Charlie	-15	209	55	3
chr7	21374761	21374762	chunk0177_73_1	30.4305	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21374541	21375041	-137970932	-	L1ME4c	LINE	L1	-275	555	10	3
chr7	21579437	21579438	chunk0177_81_1	23.80095	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21579267	21579952	-137766021	-	L2b	LINE	L2	-2	3373	2631	3
chr7	21618001	21618002	chunk0177_82_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	21617952	21618082	-137727891	-	MER91A	DNA	hAT-Tip100	-38	158	2	3
chr7	21667979	21667980	chunk0177_86_1	33.559	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21667785	21668109	-137677864	+	L1M5	LINE	L1	3362	3694	-2452	3
chr7	21890086	21890087	chunk0177_94_1	46.8556	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	21890077	21890228	-137455745	-	MIRb	SINE	MIR	-46	222	65	3
chr7	22223557	22223558	chunk0177_115_1	38.19911	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	22222258	22223890	-137122083	-	L2a	LINE	L2	-94	3332	1410	3
chr7	22326441	22326442	chunk0177_117_1	79.48542	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	22326327	22326501	-137019472	+	MER58A	DNA	hAT-Charlie	20	221	-3	3
chr7	22359696	22359697	chunk0177_127_1	6.66161	AR_DHT_Control	chr7	22359608	22359808	-136986165	+	MER3	DNA	hAT-Charlie	1	209	0	3
chr7	22586839	22586840	chunk0177_134_1	6.05516	AR_DHT_Control	chr7	22586206	22586907	-136759066	+	MER21C	LTR	ERVL	189	929	-9	3
chr7	22673523	22673524	chunk0177_140_1	17.17352	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	22672464	22673733	-136672240	+	HAL1	LINE	L1	95	1278	-1229	3
chr7	22675604	22675605	chunk0177_141_1	8.36735	AR_DHT_Control	chr7	22675464	22675669	-136670304	-	MIR	SINE	MIR	-2	260	57	3
chr7	22921311	22921312	chunk0177_150_1	17.73594	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	22921159	22921595	-136424378	+	L1M4b	LINE	L1	2445	2874	-3993	3
chr7	23015282	23015283	chunk0177_156_1	33.8243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	23015110	23015452	-136330521	-	L2c	LINE	L2	-108	3279	2911	3
chr7	23100979	23100980	chunk0177_159_1	75.85303	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	23100677	23101096	-136244877	-	MER70A	LTR	ERVL	-27	445	4	3
chr7	23212006	23212007	chunk0177_164_1	59.2737	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	23211845	23212623	-136133350	+	LTR39	LTR	ERV1	1	782	-1	3
chr7	23338639	23338640	chunk0177_177_1	15.07009	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	23338631	23338740	-136007233	-	MER5B	DNA	hAT-Charlie	0	178	73	3
chr7	23369428	23369429	chunk0177_181_1	21.3447	AR_DHT_Control	chr7	23369098	23369568	-135976405	+	LTR45B	LTR	ERV1	12	783	0	3
chr7	23628802	23628803	chunk0177_188_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	23628197	23629135	-135716838	+	L1MDa	LINE	L1	51	1151	-5482	3
chr7	23742825	23742826	chunk0177_196_1	32.51954	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	23741677	23742837	-135603136	-	L1M2a1	LINE	L1	-5929	1187	1	3
chr7	23844996	23844997	chunk0177_201_1	35.96043	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	23844558	23847393	-135498580	+	L1PA6	LINE	L1	9	2841	-3305	3
chr7	23956911	23956912	chunk0177_204_1	12.414	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	23956552	23956966	-135389007	-	LTR107_Mam	LTR	LTR	-174	396	1	3
chr7	23981921	23981922	chunk0177_206_1	293.8446	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	23981793	23982132	-135363841	+	L1M6	LINE	L1	695	1065	-5431	3
chr7	24040237	24040238	chunk0177_207_1	93.44214	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24040155	24040511	-135305462	-	L2b	LINE	L2	0	3375	3004	3
chr7	24139965	24139966	chunk0177_216_1	7.73888	AR_DHT_Control	chr7	24139899	24140063	-135205910	-	LTR86A1	LTR	ERVL	-311	202	39	3
chr7	24167184	24167185	chunk0177_220_1	8.24431	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24167073	24167204	-135178769	+	L1M5	LINE	L1	2953	3085	-3061	3
chr7	24179682	24179683	chunk0177_221_1	9.34168	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24179562	24179928	-135166045	-	L1ME4c	LINE	L1	-400	430	57	3
chr7	24311457	24311458	chunk0177_225_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	24311426	24311570	-135034403	-	LTR33	LTR	ERVL	-96	419	275	3
chr7	24345508	24345509	chunk0177_226_1	4.19197	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24345424	24345830	-135000143	-	L1ME3C	LINE	L1	-2237	3909	3512	3
chr7	24383129	24383130	chunk0177_227_1	6.89429	AR_DHT_Control	chr7	24382799	24383314	-134962659	+	L1ME4b	LINE	L1	7	560	-332	3
chr7	24485870	24485871	chunk0177_229_1	8.18895	AR_DHT_Control	chr7	24485507	24485913	-134860060	+	HAL1	LINE	L1	2075	2481	-26	3
chr7	24542840	24542841	chunk0177_231_1	12.07859	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24542285	24543071	-134802902	-	L1MB8	LINE	L1	-984	5162	4378	3
chr7	24770052	24770053	chunk0177_239_1	6.0927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	24769909	24770626	-134575347	+	MER21C	LTR	ERVL	7	856	-82	3
chr7	24962653	24962654	chunk0177_244_1	11.5199	AR_DHT_Control	chr7	24962494	24962872	-134383101	+	MLT1K	LTR	ERVL-MaLR	156	595	0	3
chr7	25128230	25128231	chunk0177_251_1	6.41766	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	25126475	25129721	-134216252	-	L1M1	LINE	L1	-4205	3360	15	3
chr7	25144442	25144443	chunk0177_252_1	8.84892	AR_DHT_Control	chr7	25144145	25144768	-134201205	-	MER115	DNA	hAT-Tip100	0	693	1	3
chr7	25194422	25194423	chunk0177_253_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	25194033	25194454	-134151519	-	L2c	LINE	L2	-149	3238	2789	3
chr7	25249925	25249926	chunk0177_255_1	224.0607	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	25249898	25250128	-134095845	+	HERVL40-int	LTR	ERVL	924	1151	-4379	3
chr7	25294778	25294779	chunk0177_258_1	16.17728	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	25294747	25294970	-134051003	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr7	25356928	25356929	chunk0177_263_1	203.3219	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	25356380	25357771	-133988202	-	Charlie1a	DNA	hAT-Charlie	-5	1450	9	3
chr7	25360751	25360752	chunk0177_264_1	5.94995	AR_DHT_Control	chr7	25360598	25360814	-133985159	+	Tigger19a	DNA	TcMar-Tigger	110	320	-3	3
chr7	25711223	25711224	chunk0177_285_1	46.3252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	25711219	25711810	-133634163	-	L1MC	LINE	L1	-1908	4238	3655	3
chr7	25794695	25794696	chunk0177_293_1	33.51455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	25794479	25794839	-133551134	-	L1M5	LINE	L1	-1896	4250	3870	3
chr7	25902914	25902915	chunk0177_297_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	25902902	25903107	-133442866	+	MIRb	SINE	MIR	14	254	-14	3
chr7	25941201	25941202	chunk0177_299_1	128.9292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	25941180	25941365	-133404608	+	MIR	SINE	MIR	20	219	-11	3
chr7	25945439	25945440	chunk0177_302_1	10.8537	AR_DHT_Control	chr7	25945428	25945919	-133400054	+	L2c	LINE	L2	2660	3178	-209	3
chr7	25971796	25971797	chunk0177_304_1	35.8592	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	25970923	25972933	-133373040	+	HAL1	LINE	L1	11	1955	-552	3
chr7	26007100	26007101	chunk0177_307_1	6.04605	AR_DHT_Control	chr7	26007066	26007263	-133338710	+	LTR81C	LTR	Gypsy	878	1212	-138	3
chr7	26088247	26088248	chunk0177_313_1	83.6635	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	26088217	26088287	-133257686	+	L2a	LINE	L2	3362	3426	0	3
chr7	26113040	26113041	chunk0177_317_1	72.0186	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	26112953	26113225	-133232748	-	L1ME4b	LINE	L1	-151	741	449	3
chr7	26258877	26258878	chunk0177_321_1	30.4102	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	26258851	26259104	-133086869	-	MER4B-int	LTR	ERV1	-1727	5031	4698	3
chr7	26404700	26404701	chunk0177_331_1	11.8363	AR_DHT_Control	chr7	26404609	26404971	-132941002	-	L2b	LINE	L2	-20	3355	2959	3
chr7	26423047	26423048	chunk0177_335_1	7.58612	AR_DHT_Control	chr7	26422987	26423104	-132922869	-	MLT1H2	LTR	ERVL-MaLR	-303	186	70	3
chr7	26467253	26467254	chunk0177_337_1	7.67158	AR_DHT_Control	chr7	26467206	26467537	-132878436	-	L2a	LINE	L2	-1690	1729	1340	3
chr7	26507629	26507630	chunk0177_340_1	51.4653	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	26507550	26507836	-132838137	+	CR1-16_AMi	LINE	CR1	153	427	-424	3
chr7	26606503	26606504	chunk0177_351_1	9.63948	AR_DHT_Control	chr7	26605673	26606657	-132739316	+	L1MC2	LINE	L1	4712	5693	-651	3
chr7	26616487	26616488	chunk0177_352_1	9.66837	AR_DHT_Control	chr7	26616162	26616617	-132729356	-	MLT1J	LTR	ERVL-MaLR	-1	511	1	3
chr7	26629852	26629853	chunk0177_353_1	44.0044	AR_DHT_Control	chr7	26629699	26629935	-132716038	-	Plat_L3	LINE	CR1	-714	2872	2640	3
chr7	26716769	26716770	chunk0177_366_1	14.69116	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	26716553	26717040	-132628933	-	L1MEi	LINE	L1	-114	2098	1585	3
chr7	26752349	26752350	chunk0177_370_1	38.91071	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	26752067	26752727	-132593246	-	L4_A_Mam	LINE	RTE-X	-119	4871	4186	3
chr7	26895994	26895995	chunk0177_381_1	53.6665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	26895882	26896156	-132449817	+	L1ME4c	LINE	L1	522	802	-28	3
chr7	26925727	26925728	chunk0177_383_1	14.7397	AR_DHT_Control	chr7	26925540	26926294	-132419679	+	L1MB7	LINE	L1	5365	6113	-71	3
chr7	26994593	26994594	chunk0177_386_1	205.2329	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	26994022	26994683	-132351290	+	L2c	LINE	L2	2695	3371	-16	3
chr7	27029023	27029024	chunk0177_389_1	43.32766	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	27028856	27029108	-132316865	+	MIR	SINE	MIR	8	259	-3	3
chr7	27031749	27031750	chunk0177_391_1	10.6202	AR_DHT_Control	chr7	27031611	27031768	-132314205	+	MIR	SINE	MIR	86	259	-3	3
chr7	27439191	27439192	chunk0177_403_1	23.35069	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	27438621	27439272	-131906701	-	L4_B_Mam	LINE	RTE-X	0	4941	4278	3
chr7	27730295	27730296	chunk0177_418_1	24.0346	AR_DHT_Control	chr7	27730083	27730529	-131615444	-	MLT1C	LTR	ERVL-MaLR	0	467	6	3
chr7	27764333	27764334	chunk0177_421_1	4.83532	AR_DHT_Control	chr7	27763998	27765000	-131580973	-	L1MC4a	LINE	L1	-2	7880	6826	3
chr7	27916733	27916734	chunk0177_428_1	6.20283	AR_DHT_Control	chr7	27916333	27916955	-131429018	-	Tigger17a	DNA	TcMar-Tigger	-6	648	2	3
chr7	28062650	28062651	chunk0177_444_1	13.4006	AR_DHT_Control	chr7	28062151	28062870	-131283103	+	LTR41B	LTR	ERVL	1	757	-1	3
chr7	28104417	28104418	chunk0177_449_1	20.54404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	28103467	28104450	-131241523	+	L2a	LINE	L2	2391	3426	0	3
chr7	28116255	28116256	chunk0177_450_1	11.66293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	28115629	28116437	-131229536	-	L1ME4b	LINE	L1	-1	891	114	3
chr7	28195541	28195542	chunk0177_453_1	6.88185	AR_DHT_Control	chr7	28195354	28195594	-131150379	+	MIR	SINE	MIR	4	240	-22	3
chr7	28359496	28359497	chunk0177_454_1	11.643	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	28359407	28360629	-130985344	+	L1MA7	LINE	L1	4826	6056	-235	3
chr7	28469750	28469751	chunk0177_456_1	38.7258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	28469669	28469906	-130876067	-	MIR	SINE	MIR	0	262	24	3
chr7	28917015	28917016	chunk0178_1_1	5.6503	AR_DHT_Control	chr7	28916915	28917032	-130428941	+	L1ME3A	LINE	L1	2430	2545	-3855	3
chr7	29022411	29022412	chunk0178_6_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	29021367	29023176	-130322797	+	L1MA4	LINE	L1	3	1626	-5583	3
chr7	29066838	29066839	chunk0178_9_1	6.06371	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	29066793	29067663	-130278310	-	L2a	LINE	L2	-2102	1317	392	3
chr7	29147532	29147533	chunk0178_13_1	7.37742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	29147480	29147630	-130198343	+	MIR	SINE	MIR	83	262	0	3
chr7	29163975	29163976	chunk0178_14_1	7.36432	AR_DHT_Control	chr7	29163548	29164502	-130181471	-	L1ME1	LINE	L1	0	6352	5325	3
chr7	29349465	29349466	chunk0178_26_1	27.58261	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	29349297	29349492	-129996481	-	MIR	SINE	MIR	-49	213	14	3
chr7	29377816	29377817	chunk0178_28_1	158.0404	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	29377799	29378067	-129967906	-	Plat_L3	LINE	CR1	-1107	2479	2205	3
chr7	29456211	29456212	chunk0178_36_1	74.1983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	29456098	29456345	-129889628	+	L2c	LINE	L2	3081	3302	-85	3
chr7	29538713	29538714	chunk0178_40_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	29538168	29540969	-129805004	+	L1MA2	LINE	L1	16	2895	-4670	3
chr7	29965045	29965046	chunk0178_53_1	212.5942	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	29964952	29965177	-129380796	+	L1MC2	LINE	L1	6171	6344	0	3
chr7	30013060	30013061	chunk0178_54_1	61.6736	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	30012897	30013112	-129332861	+	MIRc	SINE	MIR	7	242	-26	3
chr7	30102372	30102373	chunk0178_58_1	189.0717	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	30101882	30102767	-129243206	+	L1MB4	LINE	L1	5093	5967	-213	3
chr7	30140589	30140590	chunk0178_60_1	119.5244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	30140566	30140675	-129205298	+	MIRb	SINE	MIR	109	220	-48	3
chr7	30253686	30253687	chunk0178_66_1	16.136	AR_DHT_Control	chr7	30253642	30253722	-129092251	+	L2b	LINE	L2	3301	3375	0	3
chr7	30255300	30255301	chunk0178_67_1	89.91822	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	30255201	30255441	-129090532	-	MIRb	SINE	MIR	-3	265	25	3
chr7	30319919	30319920	chunk0178_71_1	53.80665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	30319888	30320094	-129025879	-	HAL1b	LINE	L1	-551	1870	1673	3
chr7	30594972	30594973	chunk0178_95_1	8.24382	AR_DHT_Control	chr7	30594953	30594985	-128750988	+	(TGCTGC)n	Simple_repeat	Simple_repeat	1	34	0	3
chr7	30608730	30608731	chunk0178_96_1	13.8249	AR_DHT_Control	chr7	30608649	30608869	-128737104	-	MIRb	SINE	MIR	-3	265	36	3
chr7	30748318	30748319	chunk0178_100_1	10.698	AR_DHT_Control	chr7	30748275	30748632	-128597341	-	L1ME4a	LINE	L1	-211	5913	5564	3
chr7	30772354	30772355	chunk0178_103_1	13.4818	AR_DHT_Control	chr7	30772352	30772552	-128573421	+	MIRb	SINE	MIR	23	237	-31	3
chr7	30809199	30809200	chunk0178_106_1	8.27376	AR_DHT_Control	chr7	30807994	30809895	-128536078	+	Harlequin-int	LTR	ERV1	1	1914	-4982	3
chr7	30942075	30942076	chunk0178_111_1	14.90582	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	30941186	30945557	-128400416	-	L1MC4	LINE	L1	-808	7407	2844	3
chr7	31272157	31272158	chunk0178_119_1	22.33442	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	31271929	31272336	-128073637	+	L2a	LINE	L2	2980	3425	-1	3
chr7	31730645	31730646	chunk0178_125_1	17.8533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	31730623	31730731	-127615242	-	L2b	LINE	L2	-31	3344	3216	3
chr7	32513891	32513892	chunk0178_132_1	12.1937	AR_DHT_Control	chr7	32513607	32514433	-126831540	-	LTR5B	LTR	ERVK	0	1002	167	3
chr7	32552717	32552718	chunk0178_134_1	18.6876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	32552579	32552797	-126793176	-	AluJb	SINE	Alu	-49	263	70	3
chr7	32668720	32668721	chunk0178_135_1	13.8492	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	32667915	32668817	-126677156	+	HAL1	LINE	L1	918	1870	-637	3
chr7	32816619	32816620	chunk0178_136_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	32816489	32816775	-126529198	+	L3	LINE	CR1	3722	4061	-38	3
chr7	32851276	32851277	chunk0178_138_1	18.72556	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	32850947	32851441	-126494532	+	L1ME3D	LINE	L1	3200	3778	-2368	3
chr7	33052837	33052838	chunk0178_142_1	9.83323	AR_DHT_Control	chr7	33052761	33052941	-126293032	-	MER5A	DNA	hAT-Charlie	-1	188	1	3
chr7	33076014	33076015	chunk0178_144_1	10.20418	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	33074456	33076144	-126269829	-	ERV24B_Prim-int	LTR	ERV1	-4058	3555	1845	3
chr7	33108076	33108077	chunk0178_145_1	6.40219	AR_DHT_Control	chr7	33107771	33108161	-126237812	-	MER57B2	LTR	ERV1	-17	386	8	3
chr7	33255464	33255465	chunk0178_147_1	26.61655	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	33255459	33255537	-126090436	-	MIR	SINE	MIR	-36	172	92	3
chr7	33528022	33528023	chunk0178_155_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	33528000	33528086	-125817887	+	(ATATA)n	Simple_repeat	Simple_repeat	1	89	0	3
chr7	34121257	34121258	chunk0178_172_1	103.02	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	34121123	34121333	-125224640	+	L1ME3Cz	LINE	L1	773	989	-8	3
chr7	34130834	34130835	chunk0178_175_1	27.46236	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	34130552	34130861	-125215112	-	L2c	LINE	L2	-4	3371	3067	3
chr7	34148376	34148377	chunk0178_176_1	10.9345	AR_DHT_Control	chr7	34147966	34148555	-125197418	+	L2c	LINE	L2	2814	3387	0	3
chr7	34166082	34166083	chunk0178_178_1	7.91804	AR_DHT_Control	chr7	34165908	34166134	-125179839	+	MER58A	DNA	hAT-Charlie	2	224	0	3
chr7	34198567	34198568	chunk0178_179_1	295.2502	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	34198475	34198596	-125147377	-	MLT1H2	LTR	ERVL-MaLR	-328	221	62	3
chr7	34236151	34236152	chunk0178_182_1	356.8027	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr7	34236027	34236204	-125109769	-	MER5A	DNA	hAT-Charlie	0	189	3	3
chr7	34261495	34261496	chunk0178_186_1	10.1791	AR_DHT_Control	chr7	34261331	34262001	-125083972	-	LTR85c	LTR	Gypsy?	-4	819	160	3
chr7	34307223	34307224	chunk0178_188_1	8.35541	AR_DHT_Control	chr7	34307079	34307257	-125038716	-	MIR3	SINE	MIR	-11	197	18	3
chr7	34380327	34380328	chunk0178_194_1	14.81806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	34378128	34381561	-124964412	-	MER57A-int	LTR	ERV1	-242	5945	1662	3
chr7	34471492	34471493	chunk0178_196_1	8.52761	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	34469813	34472790	-124873183	-	L1MA4A	LINE	L1	-3957	3252	1	3
chr7	34472924	34472925	chunk0178_198_1	85.91376	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	34472798	34473210	-124872763	-	L1MC3	LINE	L1	-1956	5829	5429	3
chr7	34493911	34493912	chunk0178_199_1	12.3053	AR_DHT_Control	chr7	34493606	34494024	-124851949	+	L2b	LINE	L2	662	1089	-2330	3
chr7	34552788	34552789	chunk0178_201_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	34551970	34558677	-124787296	+	L1PREC2	LINE	L1	16	6778	-2	3
chr7	34600098	34600099	chunk0178_203_1	14.01858	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	34599545	34600123	-124745850	+	MER119	DNA	hAT-Charlie	1	583	0	3
chr7	34814667	34814668	chunk0178_207_1	9.21264	AR_DHT_Control	chr7	34813935	34820307	-124525666	+	L1PA6	LINE	L1	1	6331	-3	3
chr7	35442710	35442711	chunk0178_213_1	8.27376	AR_DHT_Control	chr7	35442575	35442775	-123903198	-	MLT1I	LTR	ERVL-MaLR	0	411	207	3
chr7	35571178	35571179	chunk0178_216_1	55.9258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	35570776	35571394	-123774579	+	Tigger17c	DNA	TcMar-Tigger	33	670	-518	3
chr7	35695036	35695037	chunk0178_228_1	13.13835	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	35695016	35695055	-123650918	+	G-rich	Low_complexity	Low_complexity	1	39	0	3
chr7	35772077	35772078	chunk0178_232_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	35771956	35772297	-123573676	-	MER113	DNA	hAT-Charlie	-141	380	6	3
chr7	35859464	35859465	chunk0178_234_1	6.48643	AR_DHT_Control	chr7	35858979	35861592	-123484381	-	L1M4	LINE	L1	-2975	3669	802	3
chr7	36053718	36053719	chunk0178_237_1	25.3475	AR_DHT_Control	chr7	36053573	36053848	-123292125	-	HAL1M8	LINE	L1	0	2991	2694	3
chr7	36164485	36164486	chunk0178_244_1	35.6859	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	36164079	36164521	-123181452	-	Tigger13a	DNA	TcMar-Tigger	-263	508	2	3
chr7	36266883	36266884	chunk0178_253_1	7.22247	AR_DHT_Control	chr7	36266554	36267077	-123078896	-	L1MB5	LINE	L1	-1	6173	5650	3
chr7	36295388	36295389	chunk0178_257_1	51.27	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	36295196	36295546	-123050427	+	L1MC3	LINE	L1	6801	7132	-653	3
chr7	36303466	36303467	chunk0178_261_1	31.19927	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	36303371	36303514	-123042459	+	MIRb	SINE	MIR	30	179	-89	3
chr7	36348462	36348463	chunk0178_262_1	4.83532	AR_DHT_Control	chr7	36348447	36348527	-122997446	-	MER102b	DNA	hAT-Charlie	-251	80	1	3
chr7	36664172	36664173	chunk0178_265_1	8.72899	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	36663872	36664691	-122681282	-	L1MCa	LINE	L1	-744	5674	4756	3
chr7	36957574	36957575	chunk0178_272_1	5.82105	AR_DHT_Control	chr7	36957315	36957710	-122388263	+	L2a	LINE	L2	578	1014	-2405	3
chr7	37186955	37186956	chunk0178_278_1	15.26569	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	37185700	37187479	-122158494	+	L1MB8	LINE	L1	4380	6176	-2	3
chr7	37254659	37254660	chunk0178_282_1	15.40406	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	37254398	37254772	-122091201	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	3
chr7	37527118	37527119	chunk0178_291_1	43.45861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	37527038	37527178	-121818795	+	MIRc	SINE	MIR	127	266	-2	3
chr7	37578541	37578542	chunk0178_296_1	55.4392	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	37578539	37578753	-121767220	+	MIRb	SINE	MIR	10	260	-8	3
chr7	37671656	37671657	chunk0178_298_1	141.439	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	37671647	37671746	-121674227	-	L2b	LINE	L2	-7	3368	3266	3
chr7	37714011	37714012	chunk0178_299_1	17.17107	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	37713789	37714020	-121631953	-	MIRb	SINE	MIR	-8	260	20	3
chr7	37873766	37873767	chunk0178_303_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	37873725	37873885	-121472088	-	MER97d	DNA	hAT-Tip100	-894	311	79	3
chr7	37927006	37927007	chunk0178_304_1	47.5827	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	37926877	37927431	-121418542	-	L1MC4	LINE	L1	-966	7076	6497	3
chr7	37987957	37987958	chunk0178_308_1	69.1042	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	37987940	37988617	-121357356	-	Tigger6b	DNA	TcMar-Tigger	0	1597	923	3
chr7	38051813	38051814	chunk0178_310_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	38050815	38052428	-121293545	-	L1MA4A	LINE	L1	-5487	2079	360	3
chr7	38104120	38104121	chunk0178_311_1	6.21736	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	38103621	38104283	-121241690	-	L1MEg	LINE	L1	-4383	1701	995	3
chr7	38105118	38105119	chunk0178_313_1	11.60405	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	38104956	38105143	-121240830	-	MER58A	DNA	hAT-Charlie	0	224	30	3
chr7	38241297	38241298	chunk0178_320_1	167.04907	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	38241200	38241433	-121104540	+	MIR	SINE	MIR	18	256	-6	3
chr7	38245594	38245595	chunk0178_323_1	69.50532	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	38245539	38245633	-121100340	+	L2a	LINE	L2	3326	3426	0	3
chr7	38261454	38261455	chunk0178_326_1	18.05698	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	38261273	38261497	-121084476	+	MIRb	SINE	MIR	19	268	0	3
chr7	38292625	38292626	chunk0178_332_1	3.9241	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	38292523	38292677	-121053296	-	MIR	SINE	MIR	-47	215	64	3
chr7	38306129	38306130	chunk0178_334_1	15.96448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	38306119	38306149	-121039824	+	(GGTGG)n	Simple_repeat	Simple_repeat	1	30	0	3
chr7	38448450	38448451	chunk0178_337_1	35.6134	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	38448338	38448700	-120897273	-	MER44A	DNA	TcMar-Tigger	-3	336	1	3
chr7	38704416	38704417	chunk0178_341_1	7.42871	AR_DHT_Control	chr7	38704328	38704550	-120641423	-	L2c	LINE	L2	-223	3164	2939	3
chr7	38749873	38749874	chunk0178_342_1	6.40219	AR_DHT_Control	chr7	38749851	38750166	-120595807	-	AluJr4	SINE	Alu	-1	311	1	3
chr7	38826337	38826338	chunk0178_352_1	29.2417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	38826215	38826508	-120519465	+	L1M6	LINE	L1	759	1073	-5423	3
chr7	38858695	38858696	chunk0178_356_1	18.0576	AR_DHT_Control	chr7	38858618	38859758	-120486215	+	Tigger3b	DNA	TcMar-Tigger	65	1230	-1	3
chr7	39017139	39017140	chunk0178_359_1	6.48643	AR_DHT_Control	chr7	39017078	39017203	-120328770	+	L2b	LINE	L2	3240	3373	-2	3
chr7	39073051	39073052	chunk0178_361_1	13.63213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	39073017	39073131	-120272842	+	L2a	LINE	L2	3277	3418	-8	3
chr7	39238885	39238886	chunk0178_362_1	3.59319	AR_DHT_Control	chr7	39238770	39239109	-120106864	+	L1ME3	LINE	L1	5727	6131	-31	3
chr7	39649434	39649435	chunk0178_365_1	6.09452	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	39649343	39649732	-119696241	+	MLT1A1	LTR	ERVL-MaLR	4	405	-3	3
chr7	39663409	39663410	chunk0178_367_1	71.26224	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	39663183	39664812	-119681161	+	Tigger2	DNA	TcMar-Tigger	279	1918	-800	3
chr7	40017510	40017511	chunk0178_374_1	9.68843	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	40017158	40017595	-119328378	-	L1ME3G	LINE	L1	-381	543	55	3
chr7	40229011	40229012	chunk0178_376_1	17.96245	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	40228207	40229237	-119116736	-	L1MC5	LINE	L1	-290	9014	7920	3
chr7	40239969	40239970	chunk0178_378_1	119.77869	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	40239926	40240087	-119105886	-	L2b	LINE	L2	-31	3395	3213	3
chr7	40273877	40273878	chunk0178_384_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	40273591	40274073	-119071900	-	LTR80A	LTR	ERVL	-12	571	71	3
chr7	40283041	40283042	chunk0178_386_1	52.5813	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	40282869	40283219	-119062754	+	L1MA7	LINE	L1	5003	5345	-946	3
chr7	40490207	40490208	chunk0178_392_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	40489709	40490698	-118855275	-	L1MA10	LINE	L1	-5361	2204	1216	3
chr7	40570371	40570372	chunk0178_393_1	19.14168	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	40570332	40570511	-118775462	-	L2c	LINE	L2	-265	3122	2937	3
chr7	40941632	40941633	chunk0178_403_1	79.7009	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	40941180	40943263	-118402710	-	L1PB3	LINE	L1	-3097	3818	1625	3
chr7	40947782	40947783	chunk0178_405_1	9.21264	AR_DHT_Control	chr7	40946521	40947903	-118398070	-	L1M4	LINE	L1	-5412	2105	708	3
chr7	41190130	41190131	chunk0178_432_1	49.85477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	41190089	41190735	-118155238	+	MER45B	DNA	hAT-Tip100	400	1040	0	3
chr7	42090289	42090290	chunk0178_459_1	52.7753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	42089854	42090458	-117255515	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	3
chr7	42207287	42207288	chunk0178_462_1	11.8271	AR_DHT_Control	chr7	42206820	42207289	-117138684	+	L1ME3A	LINE	L1	5281	5775	-387	3
chr7	42221491	42221492	chunk0178_463_1	6.89429	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	42221421	42221570	-117124403	+	(CACA)n	Simple_repeat	Simple_repeat	1	150	0	3
chr7	42288559	42288560	chunk0178_471_1	14.01108	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	42288447	42288582	-117057391	-	L2c	LINE	L2	-6	3381	3229	3
chr7	42320788	42320789	chunk0179_1_1	7.37742	AR_DHT_Control	chr7	42320734	42320940	-117025033	-	HAL1ME	LINE	L1	-799	1666	1439	3
chr7	42426255	42426256	chunk0179_8_1	13.838	AR_DHT_Control	chr7	42425344	42426501	-116919472	-	Tigger3b	DNA	TcMar-Tigger	-13	1218	25	3
chr7	42485373	42485374	chunk0179_13_1	11.757	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	42485208	42485521	-116860452	-	L1ME4a	LINE	L1	-199	5925	5599	3
chr7	42670055	42670056	chunk0179_20_1	98.9153	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	42669771	42670225	-116675748	+	L1ME3E	LINE	L1	3369	3845	-2301	3
chr7	42887919	42887920	chunk0179_25_1	63.4411	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	42887677	42887994	-116457979	+	MER54B	LTR	ERVL	1	404	-497	3
chr7	42944898	42944899	chunk0179_27_1	5.87933	AR_DHT_Control	chr7	42944769	42944911	-116401062	-	LTR23	LTR	ERV1	0	437	300	3
chr7	42948495	42948496	chunk0179_28_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	42947942	42948571	-116397402	+	LTR24C	LTR	ERV1	2	635	0	3
chr7	42994234	42994235	chunk0179_30_1	148.95966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	42994113	42994245	-116351728	-	L1M5	LINE	L1	-989	5157	5027	3
chr7	43107833	43107834	chunk0179_31_1	49.0139	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	43107501	43107863	-116238110	+	L2c	LINE	L2	2918	3273	-114	3
chr7	43148455	43148456	chunk0179_34_1	45.00385	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	43148439	43148628	-116197345	-	MIRb	SINE	MIR	-36	232	25	3
chr7	43204477	43204478	chunk0179_35_1	10.7301	AR_DHT_Control	chr7	43204470	43204570	-116141403	-	L2b	LINE	L2	0	3375	3253	3
chr7	43294391	43294392	chunk0179_41_1	20.5155	AR_DHT_Control	chr7	43294366	43294397	-116051576	+	GA-rich	Low_complexity	Low_complexity	1	32	0	3
chr7	43370143	43370144	chunk0179_44_1	42.5702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	43370035	43370885	-115975088	+	L1MC1	LINE	L1	5174	6039	-294	3
chr7	43454210	43454211	chunk0179_47_1	6.40219	AR_DHT_Control	chr7	43454165	43454263	-115891710	+	L2c	LINE	L2	3257	3399	-27	3
chr7	43547913	43547914	chunk0179_51_1	99.74292	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	43547561	43548414	-115797559	-	Tigger2	DNA	TcMar-Tigger	-1841	877	3	3
chr7	43571007	43571008	chunk0179_53_1	12.4926	AR_DHT_Control	chr7	43570900	43571061	-115774912	+	L1M6	LINE	L1	622	803	-5693	3
chr7	43629038	43629039	chunk0179_56_1	6.9447	AR_DHT_Control	chr7	43628723	43629559	-115716414	-	L1MDa	LINE	L1	-840	5697	4740	3
chr7	43702132	43702133	chunk0179_58_1	9.00866	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	43701107	43702591	-115643382	-	L1PA15	LINE	L1	-7	6778	5279	3
chr7	43896873	43896874	chunk0179_64_1	27.9551	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	43896848	43896918	-115449055	+	(ATTT)n	Simple_repeat	Simple_repeat	1	75	0	3
chr7	44195475	44195476	chunk0179_73_1	10.3174	AR_DHT_Control	chr7	44195389	44195503	-115150470	+	AluSz6	SINE	Alu	185	299	-13	3
chr7	44299032	44299033	chunk0179_77_1	12.5882	AR_DHT_Control	chr7	44298145	44299561	-115046412	+	L1MB4	LINE	L1	4928	6354	-1	3
chr7	44338617	44338618	chunk0179_79_1	92.9384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	44338568	44339486	-115006487	-	L1ME3A	LINE	L1	-12	7252	6363	3
chr7	44469017	44469018	chunk0179_84_1	7.99358	AR_DHT_Control	chr7	44469001	44469410	-114876563	+	LTR54	LTR	ERV1	21	510	0	3
chr7	44609725	44609726	chunk0179_90_1	125.55397	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	44609526	44609981	-114735992	-	L1MD1	LINE	L1	-426	6207	5756	3
chr7	44680958	44680959	chunk0179_97_1	135.8175	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	44680574	44681258	-114664715	+	L1MC4	LINE	L1	6626	7385	-657	3
chr7	45093377	45093378	chunk0179_112_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	45092115	45093498	-114252475	+	L1MB8	LINE	L1	154	1610	-5257	3
chr7	45366682	45366683	chunk0179_115_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	45366491	45366747	-113979226	+	(TGTGCA)n	Simple_repeat	Simple_repeat	1	270	0	3
chr7	45554535	45554536	chunk0179_118_1	30.0965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	45554344	45555883	-113790090	+	L1MA9	LINE	L1	4761	6311	-1	3
chr7	45735621	45735622	chunk0179_127_1	8.27376	AR_DHT_Control	chr7	45735250	45735960	-113610013	+	Tigger3b	DNA	TcMar-Tigger	487	1228	-3	3
chr7	45929637	45929638	chunk0179_134_1	7.19378	AR_DHT_Control	chr7	45929305	45932210	-113413763	-	L1ME1	LINE	L1	-100	6079	3162	3
chr7	45943444	45943445	chunk0179_136_1	8.03415	AR_DHT_Control	chr7	45942478	45944102	-113401871	-	L1MEg	LINE	L1	-2462	3684	2011	3
chr7	45959310	45959311	chunk0179_137_1	8.24382	AR_DHT_Control	chr7	45958777	45960388	-113385585	-	L1MEf	LINE	L1	-3847	3607	2061	3
chr7	46090860	46090861	chunk0179_140_1	36.5281	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46089828	46093037	-113252936	-	L1PA15	LINE	L1	0	6165	2963	3
chr7	46091867	46091868	chunk0179_141_1	6.06878	AR_DHT_Control	chr7	46089828	46093037	-113252936	-	L1PA15	LINE	L1	0	6165	2963	3
chr7	46150421	46150422	chunk0179_143_1	43.23638	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	46149293	46150601	-113195372	-	L1MC3	LINE	L1	-39	7746	6382	3
chr7	46163375	46163376	chunk0179_144_1	10.0617	AR_DHT_Control	chr7	46163294	46163476	-113182497	+	L2b	LINE	L2	3193	3374	-1	3
chr7	46255538	46255539	chunk0179_145_1	64.9604	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46254306	46256749	-113089224	+	L1MDa	LINE	L1	3330	5965	-668	3
chr7	46287713	46287714	chunk0179_151_1	15.25212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46287692	46287729	-113058244	-	L1MA4	LINE	L1	-381	5919	5883	3
chr7	46316024	46316025	chunk0179_152_1	43.01046	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46315981	46316065	-113029908	+	MER117	DNA	hAT-Charlie	51	142	-55	3
chr7	46332267	46332268	chunk0179_154_1	24.4543	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46331247	46332603	-113013370	-	L1PB	LINE	L1	-819	5327	3851	3
chr7	46341739	46341740	chunk0179_156_1	19.71668	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	46340145	46341859	-113004114	-	L1P2	LINE	L1	-3823	2323	605	3
chr7	46640425	46640426	chunk0179_165_1	7.02986	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	46640164	46640494	-112705479	-	LTR33	LTR	ERVL	-152	363	23	3
chr7	46986979	46986980	chunk0179_180_1	6.73207	AR_DHT_Control	chr7	46986873	46987431	-112358542	-	MLT1E1-int	LTR	ERVL-MaLR	-887	602	2	3
chr7	47219881	47219882	chunk0179_192_1	8.99599	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	47219859	47219932	-112126041	+	(AT)n	Simple_repeat	Simple_repeat	1	78	0	3
chr7	47226879	47226880	chunk0179_193_1	10.46797	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	47226814	47226980	-112118993	+	MIRb	SINE	MIR	12	188	-80	3
chr7	47371328	47371329	chunk0179_202_1	55.42579	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	47371261	47371498	-111974475	-	MIRb	SINE	MIR	-8	260	6	3
chr7	47598365	47598366	chunk0179_211_1	6.35432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	47597140	47600035	-111745938	+	HUERS-P2-int	LTR	ERV1	1	3086	-2	3
chr7	47769440	47769441	chunk0179_216_1	6.54035	AR_DHT_Control	chr7	47768910	47769653	-111576320	-	L1ME3Cz	LINE	L1	-1426	4720	3901	3
chr7	47775339	47775340	chunk0179_218_1	31.63527	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	47775169	47776369	-111569604	+	L1M5	LINE	L1	2505	3688	-2458	3
chr7	47806832	47806833	chunk0179_223_1	60.73623	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	47806695	47806979	-111538994	+	MER70B	LTR	ERVL	1	289	-289	3
chr7	47969824	47969825	chunk0179_232_1	4.74037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	47969678	47969948	-111376025	+	L1M8	LINE	L1	468	749	-1606	3
chr7	48120399	48120400	chunk0179_241_1	143.0451	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	48120104	48120568	-111225405	+	MER34B-int	LTR	ERV1	1581	2046	-3310	3
chr7	48173360	48173361	chunk0179_244_1	19.53841	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	48173196	48173422	-111172551	+	L2a	LINE	L2	3197	3425	-1	3
chr7	48345169	48345170	chunk0179_249_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	48345001	48346209	-110999764	+	Tigger3b	DNA	TcMar-Tigger	10	1231	0	3
chr7	48632113	48632114	chunk0179_254_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	48630152	48632193	-110713780	-	L1PA15	LINE	L1	-6	6159	4126	3
chr7	48798709	48798710	chunk0179_257_1	23.06203	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	48798079	48799458	-110546515	+	L1MB1	LINE	L1	2775	4250	-1893	3
chr7	49241332	49241333	chunk0179_265_1	6.35715	AR_DHT_Control	chr7	49241306	49241725	-110104248	-	MLT1I	LTR	ERVL-MaLR	-10	401	1	3
chr7	49251199	49251200	chunk0179_266_1	9.06816	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49250861	49251216	-110094757	-	L1MC4a	LINE	L1	-1218	6664	6288	3
chr7	49319987	49319988	chunk0179_269_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49319019	49320462	-110025511	+	L1MD2	LINE	L1	5214	6741	-9	3
chr7	49346439	49346440	chunk0179_271_1	18.42282	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49346257	49346529	-109999444	-	L2	LINE	L2	-605	2814	2534	3
chr7	49463211	49463212	chunk0179_276_1	77.65529	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	49462854	49463550	-109882423	+	L1M1	LINE	L1	1700	2415	-5150	3
chr7	49563675	49563676	chunk0179_280_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	49563264	49566170	-109779803	+	L1PA16	LINE	L1	1	2951	-3532	3
chr7	49564182	49564183	chunk0179_281_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	49563264	49566170	-109779803	+	L1PA16	LINE	L1	1	2951	-3532	3
chr7	49601876	49601877	chunk0179_283_1	17.66874	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49601320	49603864	-109742109	-	L1MC3	LINE	L1	-1625	6160	3475	3
chr7	49606959	49606960	chunk0179_284_1	41.9344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	49604230	49607931	-109738042	+	L1PB1	LINE	L1	292	4198	-2664	3
chr7	49639309	49639310	chunk0179_289_1	128.5972	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	49639166	49639697	-109706276	+	LTR80A	LTR	ERVL	8	569	-14	3
chr7	49696618	49696619	chunk0179_291_1	6.83133	AR_DHT_Control	chr7	49696599	49696633	-109649340	+	(TGCA)n	Simple_repeat	Simple_repeat	1	34	0	3
chr7	49754243	49754244	chunk0179_292_1	8.60486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	49754223	49754340	-109591633	-	MER53	DNA	hAT	0	193	86	3
chr7	49770550	49770551	chunk0179_293_1	44.317	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	49770521	49770669	-109575304	-	MIR3	SINE	MIR	-39	169	15	3
chr7	50055633	50055634	chunk0179_299_1	88.7691	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	50055462	50055702	-109290271	+	MIR	SINE	MIR	3	256	-6	3
chr7	50078696	50078697	chunk0179_302_1	17.37694	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50078556	50078993	-109266980	+	L1P4	LINE	L1	4989	5431	-724	3
chr7	50082783	50082784	chunk0179_303_1	69.413	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50082670	50082875	-109263098	-	L1M5	LINE	L1	-2098	4048	3842	3
chr7	50482342	50482343	chunk0179_310_1	31.1508	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50482189	50482619	-108863354	-	L1M5	LINE	L1	-710	5532	5265	3
chr7	50483173	50483174	chunk0179_312_1	76.7858	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50482653	50483620	-108862353	-	L1M5	LINE	L1	-1601	4545	3524	3
chr7	50487877	50487878	chunk0179_314_1	14.7755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50487464	50488995	-108856978	+	MER4B-int	LTR	ERV1	786	3663	-2935	3
chr7	50489758	50489759	chunk0179_315_1	5.31218	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50489407	50490112	-108855861	+	MER4B-int	LTR	ERV1	3942	4660	-1938	3
chr7	50585456	50585457	chunk0179_327_1	24.69257	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	50585430	50585692	-108760281	-	MamRep137	DNA	TcMar-Tigger	-122	388	116	3
chr7	50600763	50600764	chunk0179_328_1	8.00425	AR_DHT_Control	chr7	50600687	50600792	-108745181	+	L1M	LINE	L1	5310	5419	-2463	3
chr7	50601297	50601298	chunk0179_329_1	9.94664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50600834	50603061	-108742912	+	L1MC5a	LINE	L1	321	2764	-13	3
chr7	50719067	50719068	chunk0179_339_1	25.2169	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	50718985	50719263	-108626710	-	L2a	LINE	L2	-4	3422	3103	3
chr7	50739154	50739155	chunk0179_342_1	11.47198	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50738608	50739688	-108606285	-	Charlie9	DNA	hAT-Charlie	-1595	1162	7	3
chr7	50858346	50858347	chunk0179_352_1	102.035	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	50858279	50858449	-108487524	+	LTR33	LTR	ERVL	15	197	-318	3
chr7	50886267	50886268	chunk0179_354_1	308.1807	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	50885930	50886926	-108459047	+	L1MC4a	LINE	L1	6255	7159	-723	3
chr7	50912217	50912218	chunk0179_356_1	24.052	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50912031	50912892	-108433081	+	L1MC1	LINE	L1	5441	6333	0	3
chr7	50928557	50928558	chunk0179_358_1	34.3756	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	50928533	50928625	-108417348	+	MLT2D	LTR	ERVL	1	88	-326	3
chr7	50947125	50947126	chunk0179_359_1	6.71486	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	50946612	50947317	-108398656	+	L1M2a	LINE	L1	709	1350	-6216	3
chr7	50978819	50978820	chunk0179_360_1	22.7522	AR_DHT_Control	chr7	50978727	50978937	-108367036	+	MER58A	DNA	hAT-Charlie	4	219	-5	3
chr7	51075577	51075578	chunk0179_363_1	11.5954	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	51074777	51075650	-108270323	-	MER63C	DNA	hAT-Blackjack	0	930	25	3
chr7	51180795	51180796	chunk0179_371_1	48.311	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51179505	51181236	-108164737	+	LTR49-int	LTR	ERV1	4209	5991	-2129	3
chr7	51261432	51261433	chunk0179_377_1	18.02571	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51260917	51261465	-108084508	+	L2a	LINE	L2	2817	3426	0	3
chr7	51440722	51440723	chunk0179_394_1	7.41979	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51440099	51440901	-107905072	-	L1MB8	LINE	L1	-183	5995	5201	3
chr7	51543837	51543838	chunk0179_398_1	20.0108	AR_DHT_Control	chr7	51541914	51544356	-107801617	-	L1PB1	LINE	L1	-3543	3319	834	3
chr7	51557485	51557486	chunk0179_399_1	4.06817	AR_DHT_Control	chr7	51552137	51558291	-107787682	-	L1PA6	LINE	L1	0	6154	5	3
chr7	51579015	51579016	chunk0179_401_1	18.63789	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	51578832	51579337	-107766636	-	L1M4	LINE	L1	-2532	4112	3639	3
chr7	51622199	51622200	chunk0179_408_1	7.08133	AR_DHT_Control	chr7	51621681	51622215	-107723758	-	MER41C	LTR	ERV1	0	521	3	3
chr7	51634118	51634119	chunk0179_409_1	7.06178	AR_DHT_Control	chr7	51633806	51634355	-107711618	-	MER41D	LTR	ERV1	0	557	1	3
chr7	51690869	51690870	chunk0179_413_1	5.93784	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51690028	51691438	-107654535	-	L1PB4	LINE	L1	-10	6146	4746	3
chr7	51786502	51786503	chunk0179_418_1	23.28508	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	51786469	51786667	-107559306	-	L1ME5	LINE	L1	-273	5921	5728	3
chr7	51793097	51793098	chunk0179_419_1	31.3361	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	51792751	51793254	-107552719	+	L1MC2	LINE	L1	5479	5995	-524	3
chr7	51860661	51860662	chunk0179_423_1	15.25319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	51860479	51860746	-107485227	+	MIR	SINE	MIR	1	257	-5	3
chr7	51915961	51915962	chunk0179_425_1	58.57017	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	51915123	51916004	-107429969	+	L1PA16	LINE	L1	5278	6162	-4	3
chr7	51995967	51995968	chunk0179_428_1	25.82249	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	51993407	51996728	-107349245	-	L1PA16	LINE	L1	-3548	3367	8	3
chr7	52044047	52044048	chunk0179_431_1	5.6425	AR_DHT_Control	chr7	52043721	52044244	-107301729	+	L1ME3A	LINE	L1	4997	5596	-941	3
chr7	52184690	52184691	chunk0179_433_1	5.37222	AR_DHT_Control	chr7	52184583	52184774	-107161199	-	MER34B	LTR	ERV1	-381	184	1	3
chr7	52197451	52197452	chunk0179_435_1	131.9601	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	52197181	52199380	-107146593	-	L1MB3	LINE	L1	-1103	5037	2878	3
chr7	52442510	52442511	chunk0179_442_1	8.66151	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	52442448	52443218	-106902755	-	L1MC2	LINE	L1	-691	6071	5287	3
chr7	52637606	52637607	chunk0179_444_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	52637464	52637904	-106708069	+	L1MA9	LINE	L1	3624	4066	-2074	3
chr7	52656422	52656423	chunk0179_445_1	10.9285	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	52656075	52656653	-106689320	-	LTR80B	LTR	ERVL	0	584	1	3
chr7	52725649	52725650	chunk0179_448_1	14.64496	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	52725623	52725856	-106620117	-	MIR	SINE	MIR	-6	256	5	3
chr7	52769704	52769705	chunk0179_451_1	18.49825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	52769653	52770230	-106575743	+	L1ME1	LINE	L1	5584	6168	-11	3
chr7	52816764	52816765	chunk0179_459_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	52815911	52817047	-106528926	+	L1MA9	LINE	L1	1532	2436	-5050	3
chr7	52863809	52863810	chunk0179_460_1	10.1791	AR_DHT_Control	chr7	52863724	52864462	-106481511	+	L1MB4	LINE	L1	199	1089	-5518	3
chr7	53230888	53230889	chunk0180_14_1	7.3092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	53230718	53231551	-106114422	-	L1MC5	LINE	L1	-12	9292	8435	3
chr7	53307016	53307017	chunk0180_15_1	4.56189	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	53306866	53307396	-106038577	-	MLT1H	LTR	ERVL-MaLR	-17	532	12	3
chr7	53439966	53439967	chunk0180_17_1	20.4543	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	53437951	53443526	-105902447	-	L1MC3	LINE	L1	-80	7705	2142	3
chr7	53644523	53644524	chunk0180_20_1	39.70899	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	53644465	53644853	-105701120	-	L1MC3	LINE	L1	-1257	6528	6112	3
chr7	53645786	53645787	chunk0180_21_1	5.69226	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	53645190	53646987	-105698986	-	L1MC3	LINE	L1	-1868	5917	4178	3
chr7	53796899	53796900	chunk0180_24_1	12.0377	AR_DHT_Control	chr7	53796671	53797060	-105548913	-	LTR47A	LTR	ERVL	0	452	1	3
chr7	53811752	53811753	chunk0180_27_1	9.21264	AR_DHT_Control	chr7	53811596	53812122	-105533851	-	MLT2B3	LTR	ERVL	-5	549	1	3
chr7	53854069	53854070	chunk0180_28_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	53853824	53854423	-105491550	-	MER73	LTR	ERVL	-17	627	9	3
chr7	54349307	54349308	chunk0180_38_1	106.5441	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	54349285	54349500	-104996473	+	L3b	LINE	CR1	4613	4837	-395	3
chr7	54485195	54485196	chunk0180_41_1	46.18011	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	54485127	54485256	-104860717	+	L2c	LINE	L2	3256	3374	-13	3
chr7	54658884	54658885	chunk0180_46_1	80.61213	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	54658559	54658910	-104687063	-	LTR40a	LTR	ERVL	-132	387	36	3
chr7	54713530	54713531	chunk0180_51_1	75.1682	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	54713324	54713692	-104632281	-	LTR53-int	LTR	ERVL	-2424	3261	2681	3
chr7	54824417	54824418	chunk0180_62_1	45.85329	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	54824264	54824919	-104521054	-	L1ME2	LINE	L1	-258	5906	5209	3
chr7	54877909	54877910	chunk0180_67_1	80.53237	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	54877513	54878772	-104467201	-	L1M4b	LINE	L1	-5544	1323	11	3
chr7	54917676	54917677	chunk0180_69_1	60.3665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	54917610	54917735	-104428238	+	L1MCa	LINE	L1	407	532	-5976	3
chr7	54988019	54988020	chunk0180_76_1	26.5528	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	54987912	54988085	-104357888	-	L2c	LINE	L2	-66	3321	3125	3
chr7	54996165	54996166	chunk0180_80_1	13.04909	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	54996005	54996961	-104349012	+	L2	LINE	L2	1936	2937	-482	3
chr7	54997391	54997392	chunk0180_82_1	6.86162	AR_DHT_Control	chr7	54997295	54997601	-104348372	-	MER58B	DNA	hAT-Charlie	0	341	17	3
chr7	55045741	55045742	chunk0180_88_1	6.66404	AR_DHT_Control	chr7	55045579	55045766	-104300207	+	MIRb	SINE	MIR	71	268	0	3
chr7	55082020	55082021	chunk0180_94_1	59.18595	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	55081862	55082086	-104263887	-	MER112	DNA	hAT-Charlie	0	261	8	3
chr7	55261342	55261343	chunk0180_101_1	5.3309	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	55260815	55262323	-104083650	+	L1M3e	LINE	L1	466	2690	-4806	3
chr7	55266117	55266118	chunk0180_102_1	26.6789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	55265629	55266195	-104079778	+	L1M3e	LINE	L1	6214	6776	-783	3
chr7	55336587	55336588	chunk0180_106_1	7.74912	AR_DHT_Control	chr7	55336467	55336773	-104009200	+	MER67C	LTR	ERV1	89	425	-286	3
chr7	55365964	55365965	chunk0180_110_1	16.3755	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	55365946	55365982	-103979991	+	(CGG)n	Simple_repeat	Simple_repeat	1	37	0	3
chr7	55438975	55438976	chunk0180_118_1	7.83042	AR_DHT_Control	chr7	55438664	55439855	-103906118	-	L2a	LINE	L2	-510	2909	1388	3
chr7	55464310	55464311	chunk0180_119_1	6.28117	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	55462917	55465186	-103880787	-	L1MA4A	LINE	L1	-4894	2315	1	3
chr7	55569668	55569669	chunk0180_122_1	7.87427	AR_DHT_Control	chr7	55569484	55569691	-103776282	+	MIR	SINE	MIR	3	252	-10	3
chr7	55598174	55598175	chunk0180_123_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	55596808	55598547	-103747426	+	L1PA16	LINE	L1	64	1943	-4746	3
chr7	55668780	55668781	chunk0180_126_1	7.36432	AR_DHT_Control	chr7	55667663	55669150	-103676823	+	L1MA5	LINE	L1	4746	6278	-22	3
chr7	55970828	55970829	chunk0180_129_1	7.09019	AR_DHT_Control	chr7	55970689	55971039	-103374934	+	L2c	LINE	L2	2962	3353	-34	3
chr7	56503723	56503724	chunk0180_142_1	23.7844	AR_DHT_Control	chr7	56503590	56503958	-102842015	+	L1MB3	LINE	L1	5823	6183	0	3
chr7	56620720	56620721	chunk0180_143_1	5.0408	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	56620419	56620848	-102725125	+	MER61B	LTR	ERV1	1	427	0	3
chr7	57343063	57343064	chunk0180_145_1	9.45481	AR_DHT_Control	chr7	57342627	57343424	-102002549	+	L2a	LINE	L2	2575	3361	-65	3
chr7	58434580	58434581	chunk0180_148_1	11.1716	AR_DHT_Control	chr7	58356144	58500000	-100845973	+	ALR/Alpha	Satellite	centr	1	144345	0	3
chr7	64454016	64454017	chunk0180_151_1	7.86105	AR_DHT_Control	chr7	64453346	64454230	-94891743	-	L1MA6	LINE	L1	-2	7717	6842	3
chr7	64480582	64480583	chunk0180_152_1	17.6003	AR_DHT_Control	chr7	64480395	64481688	-94864285	-	PRIMA4-int	LTR	ERV1	-4233	4037	2640	3
chr7	64533938	64533939	chunk0180_156_1	15.08382	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	64532333	64535133	-94810840	+	L1PB1	LINE	L1	3940	6833	-34	3
chr7	64626782	64626783	chunk0180_158_1	19.3	AR_DHT_Control	chr7	64626253	64627107	-94718866	-	BSR/Beta	Satellite	Satellite	-10	869	1	3
chr7	64908399	64908400	chunk0180_160_1	36.2155	AR_DHT_Control	chr7	64908240	64908457	-94437516	-	L1PA11	LINE	L1	0	6174	5948	3
chr7	64997683	64997684	chunk0180_163_1	22.544	AR_DHT_Control	chr7	64990915	64999343	-94346630	-	HERV3-int	LTR	ERV1	0	8426	2	3
chr7	65049097	65049098	chunk0180_164_1	22.0454	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	65048953	65049215	-94296758	+	Charlie15b	DNA	hAT-Charlie	645	933	-128	3
chr7	65213517	65213518	chunk0180_167_1	18.7412	AR_DHT_Control	chr7	65213403	65213525	-94132448	-	L2c	LINE	L2	-37	3350	3201	3
chr7	65284581	65284582	chunk0180_168_1	49.0541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	65284353	65284696	-94061277	+	L1PA11	LINE	L1	5035	5397	-777	3
chr7	65308435	65308436	chunk0180_170_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	65306353	65311227	-94034746	+	PABL_B-int	LTR	ERV1	2205	7122	0	3
chr7	65384896	65384897	chunk0180_172_1	14.9085	AR_DHT_Control	chr7	65384798	65384903	-93961070	+	MIRb	SINE	MIR	155	252	-16	3
chr7	65430002	65430003	chunk0180_174_1	12.89264	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	65429952	65430146	-93915827	+	(GTGACAC)n	Simple_repeat	Simple_repeat	1	213	0	3
chr7	65489596	65489597	chunk0180_176_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	65488937	65489682	-93856291	+	(ATTCC)n	Simple_repeat	Simple_repeat	1	754	0	3
chr7	65719315	65719316	chunk0180_178_1	19.8997	AR_DHT_Control	chr7	65719293	65719415	-93626558	-	L2c	LINE	L2	-37	3350	3201	3
chr7	65882647	65882648	chunk0180_180_1	48.8303	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	65882626	65882729	-93463244	+	Charlie15b	DNA	hAT-Charlie	283	389	-672	3
chr7	65928841	65928842	chunk0180_183_1	8.27376	AR_DHT_Control	chr7	65928391	65929126	-93416847	-	L1ME1	LINE	L1	-157	6022	4852	3
chr7	65947089	65947090	chunk0180_184_1	18.7412	AR_DHT_Control	chr7	65946853	65947165	-93398808	+	AluJb	SINE	Alu	1	312	0	3
chr7	66119699	66119700	chunk0180_189_1	11.4571	AR_DHT_Control	chr7	66118884	66119721	-93226252	+	MER21A	LTR	ERVL	70	913	-18	3
chr7	66159739	66159740	chunk0180_193_1	65.1616	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	66159455	66159779	-93186194	+	L1MB4	LINE	L1	1258	1580	-5027	3
chr7	66168207	66168208	chunk0180_195_1	27.66169	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	66168003	66168547	-93177426	-	L1MB4	LINE	L1	-352	5828	5315	3
chr7	66304053	66304054	chunk0180_200_1	9.68843	AR_DHT_Control	chr7	66304012	66304134	-93041839	-	MLT2E	LTR	ERVL	0	628	510	3
chr7	66443141	66443142	chunk0180_207_1	18.59116	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	66442906	66443791	-92902182	+	L1MEc	LINE	L1	1987	2861	-3458	3
chr7	66716700	66716701	chunk0180_212_1	13.9359	AR_DHT_Control	chr7	66716625	66716761	-92629212	-	L1MD2	LINE	L1	-3990	2635	2501	3
chr7	66781776	66781777	chunk0180_213_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	66781619	66782065	-92563908	-	L1MEc	LINE	L1	-5915	485	39	3
chr7	66921001	66921002	chunk0180_215_1	17.82525	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	66920825	66921080	-92424893	+	(CA)n	Simple_repeat	Simple_repeat	1	262	0	3
chr7	67067569	67067570	chunk0180_218_1	24.5315	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	67067522	67067602	-92278371	-	L1M4	LINE	L1	-475	6305	6222	3
chr7	67198744	67198745	chunk0180_227_1	20.2953	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	67198598	67198763	-92147210	-	MER58C	DNA	hAT-Charlie	-36	179	2	3
chr7	67381096	67381097	chunk0180_230_1	5.32898	AR_DHT_Control	chr7	67380310	67381149	-91964824	+	(GTGT)n	Simple_repeat	Simple_repeat	1	847	0	3
chr7	67381096	67381097	chunk0180_230_1	5.32898	AR_DHT_Control	chr7	67381080	67381191	-91964782	+	(TG)n	Simple_repeat	Simple_repeat	1	115	0	3
chr7	67438431	67438432	chunk0180_233_1	29.5848	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	67438416	67438461	-91907512	+	(TGTT)n	Simple_repeat	Simple_repeat	1	48	0	3
chr7	67692543	67692544	chunk0180_241_1	16.6117	AR_DHT_Control	chr7	67692299	67692562	-91653411	-	L1MEd	LINE	L1	-6771	315	57	3
chr7	67694039	67694040	chunk0180_243_1	19.78964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	67694001	67694158	-91651815	+	(CT)n	Simple_repeat	Simple_repeat	1	160	0	3
chr7	68731235	68731236	chunk0180_247_1	20.47324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	68731148	68731261	-90614712	+	L2b	LINE	L2	3261	3373	-2	3
chr7	69398856	69398857	chunk0180_256_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	69398848	69399191	-89946782	+	MSTD	LTR	ERVL-MaLR	3	396	0	3
chr7	69617001	69617002	chunk0180_264_1	27.3033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	69616908	69617117	-89728856	-	L2a	LINE	L2	0	3426	3209	3
chr7	69647941	69647942	chunk0180_266_1	15.44407	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	69647683	69648122	-89697851	-	MLT1C	LTR	ERVL-MaLR	0	467	1	3
chr7	69654539	69654540	chunk0180_270_1	15.00434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	69654403	69654658	-89691315	-	MIR	SINE	MIR	0	262	13	3
chr7	70037014	70037015	chunk0180_287_1	6.98475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	70037012	70037519	-89308454	+	L1MA9	LINE	L1	5770	6274	-38	3
chr7	70059679	70059680	chunk0180_288_1	9.63462	AR_DHT_Control	chr7	70059566	70059683	-89286290	-	L2c	LINE	L2	-223	3164	3045	3
chr7	70150465	70150466	chunk0180_292_1	71.7677	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	70149337	70150550	-89195423	-	MER92-int	LTR	ERV1	-3616	1602	329	3
chr7	70307917	70307918	chunk0180_299_1	27.33514	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	70307741	70308028	-89037945	-	L4_C_Mam	LINE	RTE-X	-900	4238	3884	3
chr7	71251966	71251967	chunk0180_315_1	30.5324	AR_DHT_Control	chr7	71251703	71251975	-88093998	-	Charlie7	DNA	hAT-Charlie	-2011	601	309	3
chr7	71770655	71770656	chunk0180_317_1	8.27376	AR_DHT_Control	chr7	71770546	71770683	-87575290	+	L2c	LINE	L2	2607	2744	-675	3
chr7	72613229	72613230	chunk0180_325_1	64.791	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	72613200	72613366	-86732607	+	MER58C	DNA	hAT-Charlie	2	179	-36	3
chr7	72632841	72632842	chunk0180_326_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	72632709	72632930	-86713043	-	MIR	SINE	MIR	-12	250	43	3
chr7	72636495	72636496	chunk0180_327_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	72636026	72636894	-86709079	-	L1ME3B	LINE	L1	-1572	4574	3648	3
chr7	72671060	72671061	chunk0180_329_1	37.1014	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	72671000	72671134	-86674839	-	L2a	LINE	L2	0	3426	3272	3
chr7	72732101	72732102	chunk0180_330_1	8.27376	AR_DHT_Control	chr7	72731968	72733159	-86612814	+	L1M2	LINE	L1	3741	4986	-2576	3
chr7	72744255	72744256	chunk0180_331_1	18.39273	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	72744119	72744276	-86601697	+	L1M4	LINE	L1	2633	2784	-4920	3
chr7	72753926	72753927	chunk0180_333_1	8.10772	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	72753778	72754007	-86591966	+	Tigger1	DNA	TcMar-Tigger	2209	2418	0	3
chr7	73509656	73509657	chunk0180_343_1	6.44773	AR_DHT_Control	chr7	73509465	73509718	-85836255	+	AluJo	SINE	Alu	29	295	-17	3
chr7	73612972	73612973	chunk0180_350_1	119.5885	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	73612837	73613014	-85732959	-	L2c	LINE	L2	-28	3359	3173	3
chr7	73665327	73665328	chunk0180_352_1	16.06005	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	73665264	73665404	-85680569	+	AluSz	SINE	Alu	130	290	-22	3
chr7	73750068	73750069	chunk0180_357_1	273.5163	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	73749695	73750685	-85595288	-	LTR5B	LTR	ERVK	-6	996	1	3
chr7	73801932	73801933	chunk0180_360_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	73801180	73802181	-85543792	+	MER34B-int	LTR	ERV1	1236	2231	-3125	3
chr7	73955103	73955104	chunk0180_365_1	31.1353	AR_DHT_Control	chr7	73955000	73955216	-85390757	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr7	73959517	73959518	chunk0180_367_1	55.0326	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	73959497	73959662	-85386311	-	L1MEf	LINE	L1	-2650	3669	3477	3
chr7	74015719	74015720	chunk0180_369_1	31.8363	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	74015624	74015726	-85330247	+	L2b	LINE	L2	3274	3375	0	3
chr7	74381766	74381767	chunk0180_381_1	24.7911	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	74381567	74381845	-84964128	-	L1ME4b	LINE	L1	-111	781	460	3
chr7	74470679	74470680	chunk0180_384_1	10.3593	AR_DHT_Control	chr7	74470478	74470810	-84875163	+	L1MB7	LINE	L1	5579	5930	-243	3
chr7	74496196	74496197	chunk0180_386_1	13.68102	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	74496054	74496681	-84849292	+	(TGTA)n	Simple_repeat	Simple_repeat	1	630	0	3
chr7	74635720	74635721	chunk0180_390_1	32.1202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	74635604	74635735	-84710238	+	L1ME1	LINE	L1	6053	6179	0	3
chr7	75605208	75605209	chunk0180_399_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	75605146	75605217	-83740756	-	MIR3	SINE	MIR	-84	124	51	3
chr7	75653049	75653050	chunk0180_402_1	31.4713	AR_DHT_Control	chr7	75652977	75653098	-83692875	+	MLT2B4	LTR	ERVL	1	113	-284	3
chr7	75732804	75732805	chunk0180_404_1	38.5079	AR_DHT_Control	chr7	75732764	75732900	-83613073	-	MER5A1	DNA	hAT-Charlie	0	166	16	3
chr7	75910889	75910890	chunk0180_407_1	10.1061	AR_DHT_Control	chr7	75910643	75910987	-83434986	-	L1ME4b	LINE	L1	0	892	587	3
chr7	75950699	75950700	chunk0180_411_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	75950686	75950723	-83395250	+	A-rich	Low_complexity	Low_complexity	1	38	0	3
chr7	76121719	76121720	chunk0180_422_1	16.27964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	76121497	76122390	-83223583	+	L1MEc	LINE	L1	1980	2861	-3458	3
chr7	76129165	76129166	chunk0180_423_1	12.1095	AR_DHT_Control	chr7	76129054	76129270	-83216703	-	L2c	LINE	L2	-61	3326	3101	3
chr7	76249571	76249572	chunk0180_425_1	264.4709	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	76249471	76249617	-83096356	+	L3	LINE	CR1	3835	3980	-119	3
chr7	76568935	76568936	chunk0180_436_1	12.1886	AR_DHT_Control	chr7	76568793	76569118	-82776855	-	L4_A_Mam	LINE	RTE-X	-89	4901	4542	3
chr7	76586714	76586715	chunk0180_438_1	14.2911	AR_DHT_Control	chr7	76586634	76586965	-82759008	+	MER57E1	LTR	ERV1	3	372	0	3
chr7	77453765	77453766	chunk0180_449_1	10.6691	AR_DHT_Control	chr7	77453675	77453779	-81892194	-	L2a	LINE	L2	-1	3425	3292	3
chr7	77459529	77459530	chunk0180_450_1	55.6106	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	77459511	77459720	-81886253	-	MIRc	SINE	MIR	-20	248	22	3
chr7	77498976	77498977	chunk0180_456_1	6.6833	AR_DHT_Control	chr7	77498930	77499348	-81846625	+	L4_A_Mam	LINE	RTE-X	4426	4868	-122	3
chr7	77499235	77499236	chunk0180_457_1	5.59693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	77498930	77499348	-81846625	+	L4_A_Mam	LINE	RTE-X	4426	4868	-122	3
chr7	77667950	77667951	chunk0181_7_1	224.0248	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	77667551	77668011	-81677962	-	LTR40b	LTR	ERVL	0	462	7	3
chr7	77727736	77727737	chunk0181_13_1	42.74175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	77727572	77727765	-81618208	-	AluJr	SINE	Alu	-138	174	1	3
chr7	77751685	77751686	chunk0181_16_1	28.95804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	77751637	77751739	-81594234	-	MIRb	SINE	MIR	0	268	170	3
chr7	77753473	77753474	chunk0181_18_1	41.7357	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	77752641	77754011	-81591962	-	L1ME3A	LINE	L1	-7	6166	4788	3
chr7	77834462	77834463	chunk0181_24_1	25.4674	AR_DHT_Control	chr7	77834335	77834608	-81511365	-	LTR23	LTR	ERV1	-141	296	1	3
chr7	77969355	77969356	chunk0181_27_1	62.5486	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	77969069	77969363	-81376610	+	Charlie1a	DNA	hAT-Charlie	839	1155	-300	3
chr7	79236619	79236620	chunk0181_43_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	79236502	79236681	-80109292	+	MIR3	SINE	MIR	16	198	-10	3
chr7	79903653	79903654	chunk0181_45_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	79902886	79903982	-79441991	+	Tigger1	DNA	TcMar-Tigger	1300	2418	0	3
chr7	79913328	79913329	chunk0181_46_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	79912841	79913708	-79432265	+	L1MC4	LINE	L1	969	1809	-614	3
chr7	79915865	79915866	chunk0181_47_1	6.88185	AR_DHT_Control	chr7	79915077	79919714	-79426259	+	L1P2	LINE	L1	5	4670	-1476	3
chr7	79929193	79929194	chunk0181_48_1	15.4837	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	79928467	79933889	-79412084	-	L1PA11	LINE	L1	-7	7602	2049	3
chr7	80078315	80078316	chunk0181_50_1	7.77075	AR_DHT_Control	chr7	80077941	80078462	-79267511	-	L2c	LINE	L2	-254	3133	2333	3
chr7	80157464	80157465	chunk0181_55_1	5.08049	AR_DHT_Control	chr7	80156784	80157702	-79188271	-	L1MC1	LINE	L1	0	6333	5399	3
chr7	80208877	80208878	chunk0181_60_1	45.15116	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	80208679	80209228	-79136745	-	MLT1-int	LTR	ERVL-MaLR	-812	559	2	3
chr7	80319539	80319540	chunk0181_81_1	37.3657	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	80318547	80320511	-79025462	+	MER31-int	LTR	ERV1	331	2472	-2464	3
chr7	80386336	80386337	chunk0181_92_1	6.76351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	80386240	80386376	-78959597	+	MIRb	SINE	MIR	81	224	-44	3
chr7	80463191	80463192	chunk0181_95_1	21.31164	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	80463045	80463300	-78882673	-	L2c	LINE	L2	-3	3384	3116	3
chr7	80611987	80611988	chunk0181_106_1	116.523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	80611515	80612107	-78733866	-	MER90a	LTR	ERV1	0	614	5	3
chr7	80705372	80705373	chunk0181_116_1	6.3126	AR_DHT_Control	chr7	80705317	80705403	-78640570	+	GA-rich	Low_complexity	Low_complexity	1	86	0	3
chr7	81092745	81092746	chunk0181_133_1	7.36432	AR_DHT_Control	chr7	81092635	81092882	-78253091	-	MLT1B	LTR	ERVL-MaLR	-139	251	1	3
chr7	81453961	81453962	chunk0181_142_1	17.0249	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	81449458	81454916	-77891057	+	L1PB1	LINE	L1	1183	6859	-8	3
chr7	81615830	81615831	chunk0181_145_1	5.6425	AR_DHT_Control	chr7	81615588	81615983	-77729990	+	L2c	LINE	L2	2943	3375	0	3
chr7	81908294	81908295	chunk0181_151_1	7.62093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	81908222	81908588	-77437385	+	L1PA14	LINE	L1	1895	2272	-4510	3
chr7	81909164	81909165	chunk0181_152_1	9.63462	AR_DHT_Control	chr7	81908630	81909229	-77436744	+	L1PA14	LINE	L1	2273	2880	-3902	3
chr7	82049731	82049732	chunk0181_154_1	62.9206	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	82049612	82049763	-77296210	-	MER5A1	DNA	hAT-Charlie	-22	144	2	3
chr7	82068051	82068052	chunk0181_157_1	51.99517	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	82067900	82068655	-77277318	+	LTR41	LTR	ERVL	15	768	0	3
chr7	82511772	82511773	chunk0181_162_1	42.18963	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	82511302	82511933	-76834040	-	L1MEg	LINE	L1	-3803	2516	1832	3
chr7	82945269	82945270	chunk0181_173_1	24.79329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	82945105	82945274	-76400699	+	L3	LINE	CR1	804	971	-3128	3
chr7	82985217	82985218	chunk0181_176_1	4.26204	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	82985139	82985554	-76360419	-	L4_A_Mam	LINE	RTE-X	-441	4549	4142	3
chr7	83051331	83051332	chunk0181_178_1	4.96282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	83050927	83052174	-76293799	+	L1MC	LINE	L1	3848	5131	-1015	3
chr7	83828715	83828716	chunk0181_200_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	83828696	83829093	-75516880	+	MSTA	LTR	ERVL-MaLR	1	426	-2	3
chr7	84450952	84450953	chunk0181_203_1	6.40219	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	84450704	84451246	-74894727	-	L1M3	LINE	L1	-846	5466	4906	3
chr7	84536297	84536298	chunk0181_208_1	5.37069	AR_DHT_Control	chr7	84536220	84536415	-74809558	+	Charlie17a	DNA	hAT-Charlie	12	217	0	3
chr7	84615511	84615512	chunk0181_214_1	116.12033	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	84615464	84615536	-74730437	-	MLT1L	LTR	ERVL-MaLR	-538	72	1	3
chr7	84654565	84654566	chunk0181_216_1	56.12	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	84654271	84654671	-74691302	+	MLT1J1	LTR	ERVL-MaLR	3	444	0	3
chr7	85238202	85238203	chunk0181_232_1	40.6769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	85237126	85238985	-74106988	-	L1MC1	LINE	L1	-6	6502	4533	3
chr7	85242601	85242602	chunk0181_233_1	7.78524	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	85242549	85242845	-74103128	-	L1MC1	LINE	L1	-3514	2807	2513	3
chr7	85243219	85243220	chunk0181_235_1	15.5051	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	85242865	85243667	-74102306	-	L1MC1	LINE	L1	-5682	826	1	3
chr7	85259241	85259242	chunk0181_236_1	109.08257	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	85258888	85260409	-74085564	-	L2a	LINE	L2	-892	2527	920	3
chr7	85341405	85341406	chunk0181_244_1	7.30624	AR_DHT_Control	chr7	85341363	85341521	-74004452	+	Tigger14a	DNA	TcMar-Tigger	125	291	-33	3
chr7	85343087	85343088	chunk0181_245_1	121.0675	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	85343053	85343089	-74002884	+	(CATTAG)n	Simple_repeat	Simple_repeat	1	37	0	3
chr7	85426593	85426594	chunk0181_248_1	6.48643	AR_DHT_Control	chr7	85426303	85429218	-73916755	+	L1MA2	LINE	L1	20	3137	-4428	3
chr7	85502300	85502301	chunk0181_249_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	85501432	85505035	-73840938	+	L1MA2	LINE	L1	19	4142	-3423	3
chr7	85752225	85752226	chunk0181_251_1	42.0857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	85750666	85753063	-73592910	+	L1PA13	LINE	L1	1227	3650	-3116	3
chr7	85765876	85765877	chunk0181_255_1	22.8968	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	85765635	85766213	-73579760	+	LTR22B2	LTR	ERVK	1	600	0	3
chr7	85792410	85792411	chunk0181_257_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	85791895	85793902	-73552071	+	L1MA3	LINE	L1	87	2431	-5134	3
chr7	85866966	85866967	chunk0181_261_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	85866269	85872603	-73473370	+	L1PA10	LINE	L1	6	6350	-3	3
chr7	85927373	85927374	chunk0181_262_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	85927038	85927580	-73418393	-	MER68	LTR	ERVL	-4	559	1	3
chr7	86162653	86162654	chunk0181_268_1	45.2535	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	86160690	86163477	-73182496	+	L1PA8A	LINE	L1	3614	6419	-27	3
chr7	86200016	86200017	chunk0181_270_1	79.5527	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	86199888	86200112	-73145861	-	MER58A	DNA	hAT-Charlie	-3	221	1	3
chr7	86201845	86201846	chunk0181_271_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	86201748	86203100	-73142873	-	MER52A	LTR	ERV1	0	2123	836	3
chr7	86241063	86241064	chunk0181_273_1	13.2796	AR_DHT_Control	chr7	86241063	86241188	-73104785	+	HAL1	LINE	L1	765	896	-1611	3
chr7	86472737	86472738	chunk0181_276_1	6.98682	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	86472643	86472843	-72873130	-	MIRc	SINE	MIR	-39	229	4	3
chr7	86600819	86600820	chunk0181_277_1	8.24382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	86599523	86602949	-72743024	+	L1PA13	LINE	L1	860	4523	-3618	3
chr7	86867360	86867361	chunk0181_284_1	51.52292	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	86867152	86870037	-72475936	+	L1MA7	LINE	L1	1	2137	-4516	3
chr7	86916431	86916432	chunk0181_288_1	48.5953	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	86916144	86916520	-72429453	-	L2c	LINE	L2	-55	3332	2920	3
chr7	86982475	86982476	chunk0181_295_1	21.733	AR_DHT_Control	chr7	86981685	86985673	-72360300	+	L1PA6	LINE	L1	174	4137	-2182	3
chr7	86984453	86984454	chunk0181_296_1	68.6751	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	86981685	86985673	-72360300	+	L1PA6	LINE	L1	174	4137	-2182	3
chr7	87029135	87029136	chunk0181_302_1	27.4194	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	87028536	87029268	-72316705	+	L2a	LINE	L2	2626	3426	0	3
chr7	87151224	87151225	chunk0181_304_1	40.1011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	87151102	87151303	-72194670	-	MIRb	SINE	MIR	-8	260	5	3
chr7	87159807	87159808	chunk0181_305_1	105.7568	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	87159696	87159951	-72186022	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr7	87344586	87344587	chunk0181_311_1	145.1791	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	87344415	87344643	-72001330	-	MER46C	DNA	TcMar-Tigger	0	338	80	3
chr7	87424167	87424168	chunk0181_314_1	53.82685	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	87424097	87424180	-71921793	-	L2c	LINE	L2	-40	3347	3259	3
chr7	87491984	87491985	chunk0181_318_1	147.1054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	87491458	87492318	-71853655	-	L1MDa	LINE	L1	-5630	1003	26	3
chr7	87675056	87675057	chunk0181_319_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	87673005	87675288	-71670685	-	L1PA13	LINE	L1	-4304	2481	59	3
chr7	87677427	87677428	chunk0181_320_1	7.29092	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	87677314	87677666	-71668307	+	L1MA9	LINE	L1	6432	6807	-147	3
chr7	87785525	87785526	chunk0181_323_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	87784066	87786170	-71559803	-	L1PA16	LINE	L1	-4848	2083	1	3
chr7	87910371	87910372	chunk0181_326_1	19.75517	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	87910290	87910449	-71435524	+	MER91A	DNA	hAT-Tip100	3	173	-23	3
chr7	88045572	88045573	chunk0181_333_1	8.76676	AR_DHT_Control	chr7	88045432	88045888	-71300085	-	L1MA8	LINE	L1	-21	6270	5794	3
chr7	88146740	88146741	chunk0181_337_1	25.21315	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	88146640	88146838	-71199135	-	MIRb	SINE	MIR	-78	190	1	3
chr7	88274902	88274903	chunk0181_344_1	12.8531	AR_DHT_Control	chr7	88274516	88275088	-71070885	-	MER41B	LTR	ERV1	0	634	59	3
chr7	88662233	88662234	chunk0181_362_1	79.7033	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	88661666	88662602	-70683371	-	L1MC3	LINE	L1	-1630	6573	5606	3
chr7	88673735	88673736	chunk0181_365_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	88673723	88673922	-70672051	+	L1PB1	LINE	L1	2	200	-6663	3
chr7	88695896	88695897	chunk0181_366_1	8.31466	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	88695816	88696275	-70649698	+	LTR68	LTR	ERV1	255	740	0	3
chr7	89124096	89124097	chunk0181_377_1	21.42272	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	89123836	89124330	-70221643	-	LTR108a_Mam	LTR	ERVL	-14	497	1	3
chr7	89376324	89376325	chunk0181_382_1	33.05	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	89375817	89376927	-69969046	-	L1PB2	LINE	L1	-370	5781	4668	3
chr7	89435303	89435304	chunk0181_385_1	14.0461	AR_DHT_Control	chr7	89433992	89436896	-69909077	+	LTR46-int	LTR	ERV1	3124	6032	-953	3
chr7	89694878	89694879	chunk0181_394_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89694097	89695849	-69650124	+	L1MA1	LINE	L1	22	1758	-5807	3
chr7	89733283	89733284	chunk0181_395_1	4.22747	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89733209	89733582	-69612391	-	ERVL-B4-int	LTR	ERVL	-805	4909	4535	3
chr7	89739885	89739886	chunk0181_396_1	28.8173	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	89739862	89739903	-69606070	+	(TATT)n	Simple_repeat	Simple_repeat	1	41	0	3
chr7	89760653	89760654	chunk0181_397_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89760221	89761995	-69583978	+	L1MB7	LINE	L1	1	1932	-5277	3
chr7	89798377	89798378	chunk0181_398_1	6.93299	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89793924	89799175	-69546798	-	L1PA13	LINE	L1	-1298	5468	286	3
chr7	89960335	89960336	chunk0181_400_1	127.5436	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	89960214	89960496	-69385477	+	Tigger3a	DNA	TcMar-Tigger	60	348	0	3
chr7	90029917	90029918	chunk0181_403_1	4.34317	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90028886	90030049	-69315924	+	L1MC5	LINE	L1	7705	8876	-428	3
chr7	90157629	90157630	chunk0181_410_1	16.77135	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90157121	90157674	-69188299	-	MLT1K	LTR	ERVL-MaLR	-4	591	8	3
chr7	90213765	90213766	chunk0181_412_1	22.73251	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90213638	90213785	-69132188	-	L2a	LINE	L2	-47	3379	3248	3
chr7	90231479	90231480	chunk0181_418_1	295.5629	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	90231413	90231717	-69114256	-	Tigger3a	DNA	TcMar-Tigger	0	348	2	3
chr7	90272418	90272419	chunk0181_420_1	57.3434	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	90272331	90272524	-69073449	-	L2b	LINE	L2	-1	3386	3200	3
chr7	90489148	90489149	chunk0181_434_1	14.77273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90489053	90489342	-68856631	-	HAL1ME	LINE	L1	0	2465	2187	3
chr7	90540639	90540640	chunk0181_436_1	7.14391	AR_DHT_Control	chr7	90540295	90540872	-68805101	+	MLT1F2	LTR	ERVL-MaLR	1	560	0	3
chr7	90603591	90603592	chunk0181_438_1	29.8197	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90603315	90603610	-68742363	+	Tigger3a	DNA	TcMar-Tigger	42	348	0	3
chr7	90682833	90682834	chunk0181_442_1	18.292	AR_DHT_Control	chr7	90682310	90683518	-68662455	-	L1MC4	LINE	L1	0	8042	6774	3
chr7	90706479	90706480	chunk0181_446_1	460.8048	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	90706430	90706782	-68639191	-	L2b	LINE	L2	-19	3356	2969	3
chr7	90742498	90742499	chunk0181_451_1	9.19742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90742282	90742796	-68603177	-	L1M5	LINE	L1	-2694	3452	2881	3
chr7	90749649	90749650	chunk0181_452_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	90749166	90750153	-68595820	+	L1PA16	LINE	L1	714	1647	-5206	3
chr7	90754649	90754650	chunk0181_454_1	23.18644	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	90750898	90755624	-68590349	+	L1PA16	LINE	L1	2037	6860	-9	3
chr7	90763245	90763246	chunk0181_455_1	23.5026	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90762984	90763298	-68582675	+	L1MCa	LINE	L1	2504	2802	-3519	3
chr7	90767283	90767284	chunk0181_458_1	14.23235	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90766679	90767308	-68578665	-	LTR18B	LTR	ERVL	0	614	1	3
chr7	90902839	90902840	chunk0182_4_1	6.73207	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	90901740	90903853	-68442120	+	L1MA4A	LINE	L1	4114	6297	-6	3
chr7	90932769	90932770	chunk0182_5_1	7.58612	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	90932621	90932893	-68413080	-	MLT1F2	LTR	ERVL-MaLR	0	560	281	3
chr7	90945639	90945640	chunk0182_6_1	7.97539	AR_DHT_Control	chr7	90945338	90945796	-68400177	-	LTR33	LTR	ERVL	-8	507	3	3
chr7	90976601	90976602	chunk0182_7_1	5.73469	AR_DHT_Control	chr7	90976357	90976663	-68369310	-	AluJr	SINE	Alu	-17	295	1	3
chr7	91038228	91038229	chunk0182_9_1	13.63366	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	91038222	91038261	-68307712	-	L3	LINE	CR1	-1210	2889	2852	3
chr7	91093984	91093985	chunk0182_12_1	8.08101	AR_DHT_Control	chr7	91093632	91094193	-68251780	+	L1PA16	LINE	L1	5602	6166	0	3
chr7	91314658	91314659	chunk0182_21_1	10.0392	AR_DHT_Control	chr7	91314499	91315177	-68030796	-	L1ME4b	LINE	L1	-196	696	10	3
chr7	91504344	91504345	chunk0182_27_1	60.7085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	91504292	91504483	-67841490	+	UCON17	Unknown	Unknown	13	202	-236	3
chr7	91549361	91549362	chunk0182_29_1	64.1171	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	91549335	91549663	-67796310	-	L2a	LINE	L2	-3	3423	3042	3
chr7	91829406	91829407	chunk0182_47_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	91829371	91829462	-67516511	+	L2c	LINE	L2	3269	3357	-30	3
chr7	91850733	91850734	chunk0182_48_1	26.6841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	91850401	91850906	-67495067	+	L1MEg	LINE	L1	184	724	-5360	3
chr7	91911117	91911118	chunk0182_51_1	123.36497	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	91910716	91911834	-67434139	-	L2a	LINE	L2	0	3426	2182	3
chr7	92135724	92135725	chunk0182_67_1	14.9059	AR_DHT_Control	chr7	92135482	92135990	-67209983	+	HERV1_LTRb	LTR	ERV1	1	511	0	3
chr7	92252770	92252771	chunk0182_69_1	161.2916	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92252587	92253268	-67092705	-	L1MC4	LINE	L1	-942	7100	6461	3
chr7	92267549	92267550	chunk0182_71_1	12.5159	AR_DHT_Control	chr7	92267544	92267763	-67078210	-	L1ME3A	LINE	L1	-1031	5115	4890	3
chr7	92279888	92279889	chunk0182_72_1	32.7319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92279284	92280933	-67065040	-	MER68-int	LTR	ERVL	-1322	1668	3	3
chr7	92297098	92297099	chunk0182_75_1	15.28725	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92297046	92297266	-67048707	-	MIR	SINE	MIR	0	262	8	3
chr7	92422121	92422122	chunk0182_78_1	9.56062	AR_DHT_Control	chr7	92421699	92422175	-66923798	-	LTR33	LTR	ERVL	0	515	1	3
chr7	92636070	92636071	chunk0182_82_1	7.91804	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	92636068	92636358	-66709615	-	AluJo	SINE	Alu	-24	288	1	3
chr7	92791778	92791779	chunk0182_87_1	51.4851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	92791701	92792171	-66553802	-	L2c	LINE	L2	-245	3142	2669	3
chr7	93265460	93265461	chunk0182_104_1	11.872	AR_DHT_Control	chr7	93265263	93265462	-66080511	-	MER58A	DNA	hAT-Charlie	-2	222	21	3
chr7	93307171	93307172	chunk0182_108_1	21.3216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	93307071	93307227	-66038746	-	Tigger17a	DNA	TcMar-Tigger	0	654	498	3
chr7	93592612	93592613	chunk0182_112_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	93592558	93592777	-65753196	-	MIRb	SINE	MIR	-15	253	2	3
chr7	93653390	93653391	chunk0182_113_1	11.9934	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	93653283	93653495	-65692478	+	MIR	SINE	MIR	6	262	0	3
chr7	93810738	93810739	chunk0182_114_1	37.5212	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	93810598	93810805	-65535168	-	MER58A	DNA	hAT-Charlie	0	224	2	3
chr7	93862853	93862854	chunk0182_116_1	54.46206	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	93862398	93862926	-65483047	-	MLT1F	LTR	ERVL-MaLR	0	548	1	3
chr7	94452479	94452480	chunk0182_125_1	19.36912	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	94452464	94452517	-64893456	-	UCON81	DNA	hAT-Charlie	0	84	31	3
chr7	94507771	94507772	chunk0182_131_1	38.1959	AR_DHT_Control	chr7	94507546	94507967	-64838006	-	L2	LINE	L2	-1317	2102	1638	3
chr7	94561411	94561412	chunk0182_134_1	24.1336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	94561305	94562255	-64783718	+	L4_A_Mam	LINE	RTE-X	3772	4856	-134	3
chr7	94573709	94573710	chunk0182_136_1	17.94175	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	94572463	94574689	-64771284	-	L1PREC2	LINE	L1	-739	5421	3205	3
chr7	94932869	94932870	chunk0182_144_1	34.2576	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	94932708	94932910	-64413063	-	MamSINE1	SINE	tRNA-RTE	0	290	87	3
chr7	95385771	95385772	chunk0182_156_1	61.6496	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	95385377	95389098	-63956875	+	L1PA6	LINE	L1	2447	6150	-4	3
chr7	95432314	95432315	chunk0182_157_1	9.63948	AR_DHT_Control	chr7	95432127	95432436	-63913537	+	AluJr	SINE	Alu	1	310	-2	3
chr7	95548133	95548134	chunk0182_164_1	25.77939	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	95548016	95548400	-63797573	-	L1ME2	LINE	L1	-447	5717	5317	3
chr7	95631219	95631220	chunk0182_184_1	55.8164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	95631209	95631415	-63714558	-	MIR	SINE	MIR	-1	261	43	3
chr7	95855465	95855466	chunk0182_192_1	40.7947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	95855064	95855513	-63490460	-	L1MA8	LINE	L1	-4539	3026	2580	3
chr7	95975426	95975427	chunk0182_199_1	55.17572	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	95975232	95975677	-63370296	-	MLT1C	LTR	ERVL-MaLR	-2	465	4	3
chr7	96042677	96042678	chunk0182_203_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	96041207	96042879	-63303094	+	L1MC5	LINE	L1	6728	8501	-803	3
chr7	96308890	96308891	chunk0182_210_1	10.4518	AR_DHT_Control	chr7	96308504	96308914	-63037059	+	L1M5	LINE	L1	4944	5353	-793	3
chr7	96349758	96349759	chunk0182_216_1	122.5845	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	96349583	96349995	-62995978	+	MER70B	LTR	ERVL	4	437	-141	3
chr7	96370199	96370200	chunk0182_219_1	23.63262	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	96369474	96370662	-62975311	-	L1MC1	LINE	L1	-4785	1723	490	3
chr7	96395080	96395081	chunk0182_222_1	8.72899	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	96394305	96396094	-62949879	-	L1MA3	LINE	L1	-3412	4153	2355	3
chr7	96440011	96440012	chunk0182_224_1	21.1879	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	96440006	96440129	-62905844	+	L2c	LINE	L2	3273	3383	-4	3
chr7	97042429	97042430	chunk0182_244_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	97041926	97042461	-62303512	-	MLT1E2	LTR	ERVL-MaLR	-24	603	1	3
chr7	97144275	97144276	chunk0182_248_1	26.28545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	97143700	97145203	-62200770	-	L1PB1	LINE	L1	-366	5785	4258	3
chr7	97153535	97153536	chunk0182_250_1	19.24119	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	97153230	97153712	-62192261	-	L1MC1	LINE	L1	-359	5974	5490	3
chr7	97178435	97178436	chunk0182_252_1	56.1143	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	97178007	97179288	-62166685	-	L1MB4	LINE	L1	-118	6062	4699	3
chr7	97201495	97201496	chunk0182_254_1	9.87004	AR_DHT_Control	chr7	97201492	97201602	-62144371	+	L2a	LINE	L2	3305	3421	-5	3
chr7	97215727	97215728	chunk0182_255_1	8.15319	AR_DHT_Control	chr7	97210061	97216165	-62129808	-	L1PA6	LINE	L1	-4	6150	5	3
chr7	97253779	97253780	chunk0182_256_1	14.53944	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	97253114	97255105	-62090868	+	L1MA8	LINE	L1	4225	6270	-21	3
chr7	97360322	97360323	chunk0182_259_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	97360310	97360468	-61985505	-	L1MEd	LINE	L1	-5039	2047	1905	3
chr7	97752396	97752397	chunk0182_264_1	102.2185	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	97752110	97752478	-61593495	-	L2c	LINE	L2	-59	3328	2928	3
chr7	97897099	97897100	chunk0182_268_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	97896742	97897218	-61448755	+	L1M2	LINE	L1	6163	6624	-941	3
chr7	98112523	98112524	chunk0182_272_1	21.1421	AR_DHT_Control	chr7	98112419	98112616	-61233357	-	MER3	DNA	hAT-Charlie	0	209	1	3
chr7	98123182	98123183	chunk0182_273_1	4.40478	AR_DHT_Control	chr7	98123002	98123382	-61222591	-	HAL1	LINE	L1	-2	2505	2078	3
chr7	98136111	98136112	chunk0182_274_1	14.79142	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	98135993	98137152	-61208821	+	L1MD3	LINE	L1	6778	7975	-20	3
chr7	98137560	98137561	chunk0182_276_1	13.9199	AR_DHT_Control	chr7	98137528	98137750	-61208223	-	MER58A	DNA	hAT-Charlie	-3	221	1	3
chr7	98143759	98143760	chunk0182_278_1	16.48209	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	98143252	98144008	-61201965	+	L1ME4a	LINE	L1	5055	5886	-238	3
chr7	98218498	98218499	chunk0182_283_1	23.72891	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	98218355	98219619	-61126354	+	L1PB	LINE	L1	4125	5363	-783	3
chr7	98258727	98258728	chunk0182_289_1	20.2804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	98258697	98258898	-61087075	+	L1ME3B	LINE	L1	5790	5997	-245	3
chr7	98326887	98326888	chunk0182_294_1	26.1581	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	98326499	98327053	-61018920	+	L1MC4	LINE	L1	6942	7501	-541	3
chr7	98400548	98400549	chunk0182_298_1	7.47392	AR_DHT_Control	chr7	98400243	98400714	-60945259	+	G-rich	Low_complexity	Low_complexity	1	481	0	3
chr7	98486914	98486915	chunk0182_306_1	7.60463	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	98486680	98487154	-60858819	+	(GTGT)n	Simple_repeat	Simple_repeat	1	474	0	3
chr7	98986341	98986342	chunk0182_319_1	202.1407	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	98985814	98987002	-60358971	-	L1MB7	LINE	L1	-50	6134	4848	3
chr7	99002428	99002429	chunk0182_321_1	4.29711	AR_DHT_Control	chr7	99001781	99002479	-60343494	+	L1MD2	LINE	L1	5622	6342	-17	3
chr7	99024223	99024224	chunk0182_323_1	113.7917	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	99024063	99025245	-60320728	+	L1M4c	LINE	L1	3150	4371	-2376	3
chr7	99083187	99083188	chunk0182_329_1	25.89544	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	99083019	99083239	-60262734	+	L1MB7	LINE	L1	5963	6175	-9	3
chr7	99134283	99134284	chunk0182_333_1	25.29665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	99134255	99134294	-60211679	+	L1MD2	LINE	L1	6207	6245	-114	3
chr7	99260621	99260622	chunk0182_338_1	4.93365	AR_DHT_Control	chr7	99260510	99260716	-60085257	-	MIR	SINE	MIR	-42	220	43	3
chr7	99268016	99268017	chunk0182_339_1	12.4335	AR_DHT_Control	chr7	99268009	99268126	-60077847	-	L2a	LINE	L2	-6	3420	3302	3
chr7	99460595	99460596	chunk0182_345_1	31.30488	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	99460504	99460698	-59885275	-	MIR	SINE	MIR	-41	227	19	3
chr7	99481287	99481288	chunk0182_349_1	70.86	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	99481023	99481460	-59864513	-	L1ME4a	LINE	L1	-117	6007	5522	3
chr7	99827442	99827443	chunk0182_356_1	364.2291	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr7	99827335	99827491	-59518482	-	MER101B	LTR	ERV1	-395	175	1	3
chr7	99839867	99839868	chunk0182_361_1	38.05488	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	99839563	99840241	-59505732	-	LTR9A1	LTR	ERV1	-4	724	1	3
chr7	99883348	99883349	chunk0182_362_1	21.0751	AR_DHT_Control	chr7	99883225	99883357	-59462616	-	L1M3	LINE	L1	-1242	4898	4771	3
chr7	99925978	99925979	chunk0182_364_1	48.89704	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	99925308	99926051	-59419922	+	L1MB7	LINE	L1	4906	5685	-499	3
chr7	99949941	99949942	chunk0182_367_1	221.6277	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	99949894	99950355	-59395618	+	L1PA14	LINE	L1	5225	5687	-474	3
chr7	99971357	99971358	chunk0182_369_1	10.8743	AR_DHT_Control	chr7	99971260	99971396	-59374577	-	MIRb	SINE	MIR	-99	169	19	3
chr7	99983792	99983793	chunk0182_370_1	8.8907	AR_DHT_Control	chr7	99983739	99983825	-59362148	+	MIRb	SINE	MIR	1	96	-172	3
chr7	100022812	100022813	chunk0182_374_1	4.2558	AR_DHT_Control	chr7	100022698	100022830	-59323143	+	MIRb	SINE	MIR	120	247	-21	3
chr7	100088755	100088756	chunk0182_377_1	10.30222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	100088686	100088829	-59257144	-	MIRb	SINE	MIR	-87	181	26	3
chr7	100391791	100391792	chunk0182_389_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	100391704	100391959	-58954014	-	L2b	LINE	L2	-804	2615	2343	3
chr7	100983694	100983695	chunk0182_413_1	5.6425	AR_DHT_Control	chr7	100983575	100983698	-58362275	-	L2b	LINE	L2	-70	3317	3211	3
chr7	101143990	101143991	chunk0182_419_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101143790	101144087	-58201886	+	AluJb	SINE	Alu	9	301	-11	3
chr7	101144465	101144466	chunk0182_420_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101144420	101144724	-58201249	+	AluJb	SINE	Alu	1	312	0	3
chr7	101335762	101335763	chunk0182_426_1	11.872	AR_DHT_Control	chr7	101335513	101335785	-58010188	-	L1MC5a	LINE	L1	-154	2623	2345	3
chr7	101352481	101352482	chunk0182_427_1	80.00338	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	101352425	101352559	-57993414	-	MER134	DNA?	DNA?	-378	135	1	3
chr7	101383153	101383154	chunk0182_428_1	229.424	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101383064	101383157	-57962816	-	L1M5	LINE	L1	-1589	4557	4455	3
chr7	101441209	101441210	chunk0182_432_1	56.1254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	101441132	101441240	-57904733	+	MIR	SINE	MIR	28	150	-112	3
chr7	101488836	101488837	chunk0182_435_1	15.44723	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101488825	101489205	-57856768	+	LTR37A	LTR	ERV1	39	426	0	3
chr7	101645166	101645167	chunk0182_439_1	23.0627	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	101645141	101645201	-57700772	+	MER121	DNA	hAT?	242	303	-98	3
chr7	101779307	101779308	chunk0182_443_1	21.10034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	101779168	101779331	-57566642	+	AluJr	SINE	Alu	137	299	-13	3
chr7	101975794	101975795	chunk0182_452_1	9.31879	AR_DHT_Control	chr7	101975572	101975816	-57370157	-	L1ME3G	LINE	L1	-616	308	44	3
chr7	102082859	102082860	chunk0182_453_1	19.99676	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	102082653	102083316	-57262657	-	L1ME2	LINE	L1	-181	6156	5493	3
chr7	102086432	102086433	chunk0182_455_1	8.13752	AR_DHT_Control	chr7	102086360	102086568	-57259405	-	L1M5	LINE	L1	-3335	2811	2591	3
chr7	102121738	102121739	chunk0182_456_1	12.1147	AR_DHT_Control	chr7	102121693	102121829	-57224144	-	MIRc	SINE	MIR	-62	206	22	3
chr7	102416325	102416326	chunk0183_4_1	86.3605	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	102416206	102416664	-56929309	-	L1MC3	LINE	L1	0	7785	7279	3
chr7	102812241	102812242	chunk0183_6_1	17.40195	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	102812225	102812255	-56533718	+	U6	snRNA	snRNA	1	30	-77	3
chr7	102879186	102879187	chunk0183_10_1	8.03415	AR_DHT_Control	chr7	102878782	102879433	-56466540	+	L1M6	LINE	L1	84	790	-5706	3
chr7	102906461	102906462	chunk0183_11_1	5.6425	AR_DHT_Control	chr7	102906240	102906926	-56439047	-	L1MA1	LINE	L1	-4298	3267	2570	3
chr7	102989356	102989357	chunk0183_12_1	148.3804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	102989065	102989395	-56356578	+	L3	LINE	CR1	3648	4001	-98	3
chr7	103009725	103009726	chunk0183_15_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	103009209	103011352	-56334621	+	L1PA15	LINE	L1	3	1817	-4872	3
chr7	103130533	103130534	chunk0183_16_1	31.89531	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103130416	103130535	-56215438	+	MIRb	SINE	MIR	95	221	-47	3
chr7	103373246	103373247	chunk0183_20_1	5.9729	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103372760	103373690	-55972283	+	L1MC5a	LINE	L1	1590	2468	-309	3
chr7	103407132	103407133	chunk0183_24_1	86.2516	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103406974	103407463	-55938510	+	MER119	DNA	hAT-Charlie	3	524	-59	3
chr7	103673237	103673238	chunk0183_33_1	17.74309	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103673051	103673888	-55672085	-	L1MEh	LINE	L1	-48	2187	1411	3
chr7	103929947	103929948	chunk0183_44_1	54.37984	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103929420	103929992	-55415981	-	Tigger17a	DNA	TcMar-Tigger	-37	617	6	3
chr7	103971680	103971681	chunk0183_50_1	13.1127	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	103971376	103971726	-55374247	+	L1M5	LINE	L1	5276	5648	-476	3
chr7	104028157	104028158	chunk0183_52_1	8.08101	AR_DHT_Control	chr7	104027080	104028338	-55317635	-	Charlie1a	DNA	hAT-Charlie	-146	1309	7	3
chr7	104029951	104029952	chunk0183_53_1	8.18895	AR_DHT_Control	chr7	104029747	104030029	-55315944	-	MER57B2	LTR	ERV1	-114	289	8	3
chr7	104115293	104115294	chunk0183_56_1	38.1075	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	104113980	104115315	-55230658	-	L1MB7	LINE	L1	-2556	3590	2201	3
chr7	104142347	104142348	chunk0183_61_1	38.8667	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	104141596	104142474	-55203499	+	L1M1	LINE	L1	4251	5224	-922	3
chr7	104146318	104146319	chunk0183_62_1	14.5581	AR_DHT_Control	chr7	104146261	104147004	-55198969	+	L1MD2	LINE	L1	5590	6357	-2	3
chr7	104176921	104176922	chunk0183_65_1	6.44773	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	104176747	104177558	-55168415	+	LOR1-int	LTR	ERV1	1015	2368	-3819	3
chr7	104191932	104191933	chunk0183_69_1	6.13992	AR_DHT_Control	chr7	104191877	104193153	-55152820	+	L1MEc	LINE	L1	34	1398	-5002	3
chr7	104203250	104203251	chunk0183_70_1	8.91027	AR_DHT_Control	chr7	104203234	104203440	-55142533	+	MER58A	DNA	hAT-Charlie	3	224	0	3
chr7	104595465	104595466	chunk0183_76_1	53.6651	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	104592980	104596190	-54749783	-	L1P2	LINE	L1	-2939	3207	9	3
chr7	104898538	104898539	chunk0183_85_1	9.21264	AR_DHT_Control	chr7	104898306	104898672	-54447301	-	MER67C	LTR	ERV1	-159	552	178	3
chr7	105056015	105056016	chunk0183_93_1	22.03804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	105056008	105056098	-54289875	+	L2c	LINE	L2	3285	3379	-8	3
chr7	105083250	105083251	chunk0183_95_1	8.27376	AR_DHT_Control	chr7	105082287	105084344	-54261629	-	Tigger2	DNA	TcMar-Tigger	0	2718	588	3
chr7	105202839	105202840	chunk0183_100_1	6.9031	AR_DHT_Control	chr7	105202621	105202913	-54143060	+	L4_C_Mam	LINE	RTE-X	4662	4946	-192	3
chr7	105261972	105261973	chunk0183_105_1	11.2788	AR_DHT_Control	chr7	105261885	105262156	-54083817	-	L2	LINE	L2	-380	3039	2741	3
chr7	105317087	105317088	chunk0183_109_1	15.75434	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	105317074	105317583	-54028390	+	Charlie1a	DNA	hAT-Charlie	1	448	-1007	3
chr7	105345943	105345944	chunk0183_114_1	44.6256	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	105345771	105345965	-54000008	-	MER3	DNA	hAT-Charlie	0	209	5	3
chr7	105364901	105364902	chunk0183_116_1	23.50904	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	105364701	105365175	-53980798	-	Tigger2	DNA	TcMar-Tigger	-1059	1659	1184	3
chr7	105366940	105366941	chunk0183_117_1	21.4132	AR_DHT_Control	chr7	105366668	105367261	-53978712	-	Tigger2	DNA	TcMar-Tigger	-1795	923	392	3
chr7	105367652	105367653	chunk0183_119_1	189.5103	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	105367562	105367930	-53978043	-	Tigger2	DNA	TcMar-Tigger	-2327	391	55	3
chr7	105461725	105461726	chunk0183_121_1	90.01313	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	105461649	105461896	-53884077	-	Tigger3c	DNA	TcMar-Tigger	0	602	342	3
chr7	105677417	105677418	chunk0183_131_1	225.1059	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	105677386	105677581	-53668392	+	L2b	LINE	L2	3167	3372	-3	3
chr7	105777376	105777377	chunk0183_139_1	5.87242	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	105777365	105777541	-53568432	+	L2a	LINE	L2	1986	2184	-1235	3
chr7	105826347	105826348	chunk0183_144_1	22.804	AR_DHT_Control	chr7	105826241	105826409	-53519564	+	MIR3	SINE	MIR	16	208	0	3
chr7	105832291	105832292	chunk0183_149_1	23.1168	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	105832291	105832570	-53513403	+	MER46C	DNA	TcMar-Tigger	16	321	-17	3
chr7	105840019	105840020	chunk0183_150_1	7.60463	AR_DHT_Control	chr7	105839747	105840026	-53505947	-	L2c	LINE	L2	-17	3370	3087	3
chr7	105896667	105896668	chunk0183_152_1	12.73576	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	105896657	105896728	-53449245	+	MIRb	SINE	MIR	195	265	-3	3
chr7	105899407	105899408	chunk0183_154_1	8.36735	AR_DHT_Control	chr7	105898693	105899656	-53446317	-	L1MC1	LINE	L1	-5	6328	5358	3
chr7	106118005	106118006	chunk0183_170_1	78.5812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	106116509	106118752	-53227221	-	MER83A-int	LTR	ERV1	-16	4269	1987	3
chr7	106175633	106175634	chunk0183_175_1	28.1511	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106175329	106176011	-53169962	-	L1ME3G	LINE	L1	-203	721	1	3
chr7	106183237	106183238	chunk0183_177_1	46.1286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106182753	106183357	-53162616	-	L1ME1	LINE	L1	-1	6178	5575	3
chr7	106206033	106206034	chunk0183_182_1	34.4559	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106206033	106206094	-53139879	-	ORSL-2b	DNA	hAT-Tip100	-69	439	370	3
chr7	106207109	106207110	chunk0183_184_1	77.6015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	106206744	106207127	-53138846	-	LTR16A	LTR	ERVL	0	451	1	3
chr7	106309656	106309657	chunk0183_193_1	48.0327	AR_DHT_Control	chr7	106309643	106309774	-53036199	+	MamRep137	DNA	TcMar-Tigger	205	342	-168	3
chr7	106328667	106328668	chunk0183_196_1	32.6494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106328378	106328682	-53017291	+	MamGypLTR1c	LTR	Gypsy	501	800	-3	3
chr7	106346571	106346572	chunk0183_199_1	15.9423	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106346362	106347493	-52998480	+	Charlie6	DNA	hAT-Charlie	871	2005	-1495	3
chr7	106376260	106376261	chunk0183_200_1	115.2106	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	106376105	106376296	-52969677	+	MER90	LTR	ERV1	1	188	-387	3
chr7	106401733	106401734	chunk0183_203_1	27.2305	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106401655	106401916	-52944057	+	L1ME3G	LINE	L1	629	908	-16	3
chr7	106413607	106413608	chunk0183_205_1	22.34684	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	106413525	106413789	-52932184	+	MLT1J1	LTR	ERVL-MaLR	13	294	-150	3
chr7	106418299	106418300	chunk0183_208_1	52.0282	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106418282	106418456	-52927517	-	L2a	LINE	L2	-3	3423	3202	3
chr7	106433345	106433346	chunk0183_210_1	103.4258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106432820	106434160	-52911813	+	L1MC4a	LINE	L1	5272	6638	-1244	3
chr7	106467218	106467219	chunk0183_213_1	22.36294	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106466986	106467408	-52878565	+	LTR56	LTR	ERV1	1	441	-4	3
chr7	106611997	106611998	chunk0183_216_1	8.84892	AR_DHT_Control	chr7	106611880	106612065	-52733908	-	L2a	LINE	L2	-2	3424	3183	3
chr7	106672525	106672526	chunk0183_220_1	68.71847	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	106671761	106675311	-52670662	+	L1PA6	LINE	L1	4	3567	-2579	3
chr7	106705341	106705342	chunk0183_221_1	8.58897	AR_DHT_Control	chr7	106705202	106705835	-52640138	-	HAL1	LINE	L1	-326	2181	1535	3
chr7	106869865	106869866	chunk0183_226_1	5.69781	AR_DHT_Control	chr7	106869845	106870075	-52475898	-	MIR	SINE	MIR	-12	250	20	3
chr7	106892839	106892840	chunk0183_230_1	9.97983	AR_DHT_Control	chr7	106892720	106893012	-52452961	-	L2c	LINE	L2	-196	3191	2915	3
chr7	106912537	106912538	chunk0183_231_1	38.77631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	106912481	106912649	-52433324	+	MIRb	SINE	MIR	106	268	0	3
chr7	106950674	106950675	chunk0183_233_1	11.0326	AR_DHT_Control	chr7	106950642	106950785	-52395188	+	L2a	LINE	L2	3273	3425	-1	3
chr7	107018041	107018042	chunk0183_236_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	107017906	107018312	-52327661	-	MLT1K	LTR	ERVL-MaLR	-96	499	75	3
chr7	107041213	107041214	chunk0183_239_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	107041124	107041276	-52304697	-	MLT1G3	LTR	ERVL-MaLR	-407	172	1	3
chr7	107136891	107136892	chunk0183_245_1	4.63256	AR_DHT_Control	chr7	107135341	107137105	-52208868	+	L1MC1	LINE	L1	4091	5951	-382	3
chr7	107145213	107145214	chunk0183_247_1	26.8553	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	107145147	107145340	-52200633	-	MER58A	DNA	hAT-Charlie	-22	202	1	3
chr7	107150391	107150392	chunk0183_249_1	36.7769	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	107150369	107150500	-52195473	-	L1MA3	LINE	L1	-7	6298	6168	3
chr7	107305068	107305069	chunk0183_261_1	128.601	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	107304851	107305198	-52040775	-	L2a	LINE	L2	0	3426	3029	3
chr7	107494689	107494690	chunk0183_269_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	107494360	107494707	-51851266	+	Tigger3c	DNA	TcMar-Tigger	2	602	0	3
chr7	107527513	107527514	chunk0183_271_1	79.6254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	107527435	107527526	-51818447	+	L1PA10	LINE	L1	6064	6165	-3	3
chr7	107545888	107545889	chunk0183_272_1	70.9011	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	107545815	107546426	-51799547	+	L1M3e	LINE	L1	3545	4168	-2935	3
chr7	107560537	107560538	chunk0183_273_1	16.66952	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	107560523	107560598	-51785375	-	L2c	LINE	L2	-42	3345	3266	3
chr7	107643094	107643095	chunk0183_288_1	9.63462	AR_DHT_Control	chr7	107643092	107643538	-51702435	+	LTR24B	LTR	ERV1	96	569	-7	3
chr7	107812222	107812223	chunk0183_299_1	362.6742	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	107812004	107812601	-51533372	-	L1ME2	LINE	L1	-87	6077	5452	3
chr7	107851226	107851227	chunk0183_302_1	145.6554	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	107851160	107851287	-51494686	-	L2a	LINE	L2	-3	3423	3269	3
chr7	108028274	108028275	chunk0183_318_1	37.059	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	108028271	108028433	-51317540	-	MER20	DNA	hAT-Charlie	0	219	50	3
chr7	108050143	108050144	chunk0183_320_1	23.6354	AR_DHT_Control	chr7	108049987	108050209	-51295764	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr7	108108197	108108198	chunk0183_325_1	9.87004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	108107930	108108228	-51237745	-	AluJb	SINE	Alu	-2	310	1	3
chr7	108286974	108286975	chunk0183_333_1	21.79896	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	108286966	108288398	-51057575	+	L1PB4	LINE	L1	4853	6154	-2	3
chr7	108386917	108386918	chunk0183_340_1	20.23369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	108386897	108387259	-50958714	-	Plat_L3	LINE	CR1	-92	3494	3107	3
chr7	108517442	108517443	chunk0183_344_1	25.23785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	108516926	108517691	-50828282	+	L1MC1	LINE	L1	5168	5909	-424	3
chr7	108611334	108611335	chunk0183_350_1	114.6958	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	108611242	108611370	-50734603	-	MamTip2	DNA	hAT-Tip100	-157	148	17	3
chr7	108650940	108650941	chunk0183_357_1	58.1271	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	108650603	108651130	-50694843	+	L1ME4a	LINE	L1	5523	6083	-41	3
chr7	108740574	108740575	chunk0183_361_1	29.0402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	108739627	108743057	-50602916	-	L1PREC2	LINE	L1	-1	8154	4663	3
chr7	108999169	108999170	chunk0183_364_1	6.10159	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	108999030	108999343	-50346630	+	MER67C	LTR	ERV1	387	711	0	3
chr7	109082625	109082626	chunk0183_365_1	12.6399	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	109082325	109083207	-50262766	-	L1PA7	LINE	L1	-2466	3680	2803	3
chr7	109309953	109309954	chunk0183_369_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	109309291	109310042	-50035931	+	L1PA15	LINE	L1	496	1295	-5491	3
chr7	109496595	109496596	chunk0183_372_1	40.4499	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	109495486	109496873	-49849100	-	L1ME2	LINE	L1	-798	5760	4258	3
chr7	109501619	109501620	chunk0183_374_1	47.0149	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	109500851	109501987	-49843986	-	L1PA13	LINE	L1	-1	6162	5003	3
chr7	109584782	109584783	chunk0183_379_1	7.36432	AR_DHT_Control	chr7	109584381	109587543	-49758430	+	L1PA16	LINE	L1	2419	5635	-848	3
chr7	109708820	109708821	chunk0183_381_1	10.1791	AR_DHT_Control	chr7	109708539	109708826	-49637147	+	AluY	SINE	Alu	22	311	0	3
chr7	109812708	109812709	chunk0183_382_1	10.1791	AR_DHT_Control	chr7	109812672	109812836	-49533137	-	L1MD2	LINE	L1	-510	5849	5694	3
chr7	109892192	109892193	chunk0183_383_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	109891886	109892472	-49453501	-	Tigger3	DNA	TcMar-Tigger	-52	2977	2382	3
chr7	109964553	109964554	chunk0183_384_1	44.4878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	109963704	109964623	-49381350	-	Tigger3b	DNA	TcMar-Tigger	-103	1128	193	3
chr7	109987452	109987453	chunk0183_385_1	10.4755	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	109986990	109988340	-49357633	+	L1MC3	LINE	L1	5318	6725	-37	3
chr7	110202054	110202055	chunk0183_393_1	4.55696	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	110200074	110205103	-49140870	-	L1MA2	LINE	L1	-2382	5183	13	3
chr7	110209889	110209890	chunk0183_394_1	18.04157	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	110209733	110209899	-49136074	+	MLT1I	LTR	ERVL-MaLR	70	238	-173	3
chr7	110346334	110346335	chunk0183_402_1	9.30518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	110346246	110346415	-48999558	+	MER103C	DNA	hAT-Charlie	127	297	0	3
chr7	110394664	110394665	chunk0183_405_1	33.3948	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	110394068	110395134	-48950839	+	L1MA10	LINE	L1	4988	6334	0	3
chr7	110507731	110507732	chunk0183_408_1	19.09805	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	110507730	110507802	-48838171	-	MIRb	SINE	MIR	-28	240	167	3
chr7	110754810	110754811	chunk0183_413_1	137.6154	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	110754715	110754856	-48591117	-	Eulor2C	DNA?	DNA?	-25	144	4	3
chr7	110759300	110759301	chunk0183_415_1	286.2086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	110759139	110759394	-48586579	+	L2c	LINE	L2	3107	3387	0	3
chr7	110768777	110768778	chunk0183_418_1	4.12604	AR_DHT_Control	chr7	110768495	110768910	-48577063	+	L2c	LINE	L2	2936	3386	-1	3
chr7	110843935	110843936	chunk0183_419_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	110843514	110844091	-48501882	-	L2a	LINE	L2	-2	3424	2785	3
chr7	111019099	111019100	chunk0183_427_1	14.90342	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	111019075	111019155	-48326818	+	L2c	LINE	L2	3292	3381	-6	3
chr7	111187743	111187744	chunk0183_440_1	117.99541	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	111187659	111187885	-48158088	-	MIR	SINE	MIR	-1	261	14	3
chr7	111260215	111260216	chunk0183_446_1	61.63309	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	111259642	111260404	-48085569	-	Tigger3b	DNA	TcMar-Tigger	-469	762	1	3
chr7	111262711	111262712	chunk0183_447_1	127.1084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	111262497	111262976	-48082997	+	LTR80A	LTR	ERVL	78	583	0	3
chr7	111476223	111476224	chunk0183_454_1	13.04649	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	111476082	111476245	-47869728	-	MIR3	SINE	MIR	-28	180	23	3
chr7	111614156	111614157	chunk0184_4_1	93.5908	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	111613904	111614493	-47731480	-	MER34C_	LTR	ERV1	-2	583	1	3
chr7	111620769	111620770	chunk0184_6_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	111620271	111620903	-47725070	-	L1MB8	LINE	L1	-57	6121	5494	3
chr7	111750322	111750323	chunk0184_11_1	91.72092	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	111750188	111750738	-47595235	+	LTR80A	LTR	ERVL	3	583	0	3
chr7	111894631	111894632	chunk0184_22_1	8.2993	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	111894320	111894759	-47451214	-	L2c	LINE	L2	-2	3385	2931	3
chr7	112045487	112045488	chunk0184_29_1	20.92105	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112044497	112045537	-47300436	+	L2a	LINE	L2	2341	3425	-1	3
chr7	112060943	112060944	chunk0184_30_1	5.90945	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112060204	112060993	-47284980	+	L1MB3	LINE	L1	5381	6181	-2	3
chr7	112079851	112079852	chunk0184_33_1	8.01864	AR_DHT_Control	chr7	112079851	112079928	-47266045	+	L3	LINE	CR1	3815	3890	-209	3
chr7	112116997	112116998	chunk0184_36_1	84.7091	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	112116895	112117358	-47228615	+	Tigger9b	DNA	TcMar-Tigger	1	476	-148	3
chr7	112211740	112211741	chunk0184_41_1	9.56062	AR_DHT_Control	chr7	112211724	112211921	-47134052	+	L2c	LINE	L2	3170	3366	-21	3
chr7	112239912	112239913	chunk0184_42_1	5.10868	AR_DHT_Control	chr7	112239612	112240241	-47105732	+	L1MA3	LINE	L1	2930	3537	-4028	3
chr7	112282861	112282862	chunk0184_52_1	10.90837	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112282767	112283008	-47062965	+	MIR	SINE	MIR	12	258	-4	3
chr7	112321998	112321999	chunk0184_53_1	5.56779	AR_DHT_Control	chr7	112321219	112323793	-47022180	-	L1M4	LINE	L1	-3892	2975	379	3
chr7	112381945	112381946	chunk0184_56_1	22.82085	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112381176	112382664	-46963309	-	L1PA16	LINE	L1	0	6166	4650	3
chr7	112420457	112420458	chunk0184_58_1	62.5712	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112420380	112420530	-46925443	+	L2a	LINE	L2	3272	3425	-1	3
chr7	112553251	112553252	chunk0184_69_1	17.4005	AR_DHT_Control	chr7	112553236	112553276	-46792697	+	(ACAGTTTT)n	Simple_repeat	Simple_repeat	1	42	0	3
chr7	112651616	112651617	chunk0184_74_1	9.85287	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112650362	112654347	-46691626	+	L1MA9	LINE	L1	1817	6026	-522	3
chr7	112692279	112692280	chunk0184_75_1	4.83532	AR_DHT_Control	chr7	112691915	112692349	-46653624	-	L1MC5	LINE	L1	-11	9293	8816	3
chr7	112848544	112848545	chunk0184_79_1	8.27376	AR_DHT_Control	chr7	112848352	112848545	-46497428	-	L2c	LINE	L2	-8	3379	3182	3
chr7	112881275	112881276	chunk0184_80_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	112880837	112882391	-46463582	+	MER52A	LTR	ERV1	1	1755	0	3
chr7	112958159	112958160	chunk0184_82_1	144.2313	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	112957249	112958630	-46387343	+	L2a	LINE	L2	1716	3426	0	3
chr7	113034659	113034660	chunk0184_83_1	23.43667	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	113034615	113034814	-46311159	-	L2c	LINE	L2	-12	3375	3178	3
chr7	113264957	113264958	chunk0184_89_1	27.26413	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	113264920	113265703	-46080270	+	L1M1	LINE	L1	4099	4897	-1249	3
chr7	113268792	113268793	chunk0184_90_1	6.54035	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	113268035	113269654	-46076319	+	L1PA17	LINE	L1	506	1888	-5327	3
chr7	113331385	113331386	chunk0184_91_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	113331173	113332301	-46013672	+	L1PA8A	LINE	L1	6	1131	-4744	3
chr7	113333517	113333518	chunk0184_93_1	22.80689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	113332296	113334886	-46011087	+	L1PA8A	LINE	L1	1936	4563	-1898	3
chr7	113491461	113491462	chunk0184_109_1	13.85204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	113491435	113491466	-45854507	+	A-rich	Low_complexity	Low_complexity	1	31	0	3
chr7	113714513	113714514	chunk0184_113_1	116.85267	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	113714285	113714684	-45631289	-	Tigger3b	DNA	TcMar-Tigger	-801	430	2	3
chr7	114372713	114372714	chunk0184_122_1	88.6641	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	114372710	114372748	-44973225	+	(GTTTT)n	Simple_repeat	Simple_repeat	1	39	0	3
chr7	114394524	114394525	chunk0184_124_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	114394455	114395129	-44950844	+	L1MC4	LINE	L1	7240	8029	-13	3
chr7	114848321	114848322	chunk0184_127_1	7.36432	AR_DHT_Control	chr7	114848285	114848495	-44497478	+	MLT1I	LTR	ERVL-MaLR	63	273	-138	3
chr7	115271488	115271489	chunk0184_131_1	112.6936	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	115271171	115271515	-44074458	-	MLT1J1	LTR	ERVL-MaLR	-27	417	42	3
chr7	115447833	115447834	chunk0184_133_1	5.28878	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	115447711	115448063	-43897910	-	L1ME3G	LINE	L1	-602	322	63	3
chr7	115649545	115649546	chunk0184_137_1	60.9683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	115649397	115649805	-43696168	+	LTR40a	LTR	ERVL	3	415	-104	3
chr7	115724579	115724580	chunk0184_142_1	13.2288	AR_DHT_Control	chr7	115724284	115725031	-43620942	+	L1ME3A	LINE	L1	5361	6171	-2	3
chr7	115776194	115776195	chunk0184_144_1	77.2837	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	115776051	115776531	-43569442	-	MLT1F2	LTR	ERVL-MaLR	-2	678	1	3
chr7	115987758	115987759	chunk0184_146_1	10.4087	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	115987756	115987811	-43358162	+	(AT)n	Simple_repeat	Simple_repeat	1	57	0	3
chr7	116096739	116096740	chunk0184_148_1	29.2263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	116096688	116096809	-43249164	+	L1MDa	LINE	L1	2113	2225	-4408	3
chr7	116170387	116170388	chunk0184_150_1	7.92341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	116170280	116170455	-43175518	+	LTR81AB	LTR	Gypsy	76	244	-34	3
chr7	116220615	116220616	chunk0184_155_1	63.5825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	116220414	116220624	-43125349	+	MIR	SINE	MIR	23	252	-10	3
chr7	116239497	116239498	chunk0184_160_1	6.18774	AR_DHT_Control	chr7	116239455	116239562	-43106411	-	MIR	SINE	MIR	-124	138	22	3
chr7	116454089	116454090	chunk0184_173_1	17.5488	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	116454089	116454188	-42891785	-	MIRc	SINE	MIR	-92	176	75	3
chr7	116730801	116730802	chunk0184_184_1	6.29634	AR_DHT_Control	chr7	116729869	116730879	-42615094	-	L2c	LINE	L2	-1	3386	2378	3
chr7	116781203	116781204	chunk0184_186_1	11.68564	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	116780883	116781411	-42564562	+	MER74A	LTR	ERVL	19	558	0	3
chr7	116923487	116923488	chunk0184_193_1	8.27376	AR_DHT_Control	chr7	116923457	116923499	-42422474	-	Charlie17a	DNA	hAT-Charlie	-149	68	27	3
chr7	116942991	116942992	chunk0184_195_1	15.67898	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	116942866	116943113	-42402860	+	Charlie7a	DNA	hAT-Charlie	1	271	-1	3
chr7	116953188	116953189	chunk0184_196_1	5.50096	AR_DHT_Control	chr7	116952980	116953196	-42392777	+	MIR	SINE	MIR	8	258	-4	3
chr7	117269295	117269296	chunk0184_211_1	48.7718	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	117269282	117269351	-42076622	+	MIRc	SINE	MIR	11	80	-188	3
chr7	117280393	117280394	chunk0184_212_1	28.55731	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117280346	117280501	-42065472	-	L2b	LINE	L2	-5	3370	3226	3
chr7	117332382	117332383	chunk0184_213_1	6.48643	AR_DHT_Control	chr7	117332183	117332761	-42013212	+	L1MEf	LINE	L1	2538	3345	-3199	3
chr7	117442905	117442906	chunk0184_219_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117442891	117443041	-41902932	-	MIRb	SINE	MIR	-57	211	40	3
chr7	117473174	117473175	chunk0184_226_1	42.9173	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117473172	117473364	-41872609	+	MIR	SINE	MIR	10	182	-80	3
chr7	117490219	117490220	chunk0184_228_1	7.11634	AR_DHT_Control	chr7	117490062	117490243	-41855730	+	MIRb	SINE	MIR	7	184	-84	3
chr7	117496279	117496280	chunk0184_229_1	5.20246	AR_DHT_Control	chr7	117496203	117496502	-41849471	-	AluJr	SINE	Alu	-12	300	2	3
chr7	117573051	117573052	chunk0184_233_1	21.57061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	117573036	117573073	-41772900	+	(TC)n	Simple_repeat	Simple_repeat	1	38	0	3
chr7	117588712	117588713	chunk0184_236_1	91.7651	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117588625	117588843	-41757130	-	MIRb	SINE	MIR	-8	260	42	3
chr7	117705789	117705790	chunk0184_242_1	26.36205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117705497	117705921	-41640052	-	L1MA8	LINE	L1	-249	6042	5608	3
chr7	117907645	117907646	chunk0184_248_1	211.049	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	117906736	117907804	-41438169	+	L2c	LINE	L2	2253	3387	0	3
chr7	117950774	117950775	chunk0184_251_1	7.87682	AR_DHT_Control	chr7	117950637	117950804	-41395169	-	L2c	LINE	L2	-267	3120	2935	3
chr7	118010089	118010090	chunk0184_256_1	13.66938	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	118009990	118010135	-41335838	+	L2a	LINE	L2	3263	3416	-10	3
chr7	118053538	118053539	chunk0184_257_1	67.9122	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118053493	118053569	-41292404	-	L2b	LINE	L2	-11	3364	3289	3
chr7	118148697	118148698	chunk0184_259_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	118148444	118148937	-41197036	-	LTR16E1	LTR	ERVL	0	538	7	3
chr7	118280591	118280592	chunk0184_266_1	19.26025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118280344	118280953	-41065020	-	L1MEb	LINE	L1	-5383	687	27	3
chr7	118575531	118575532	chunk0184_271_1	68.95797	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118575483	118575707	-40770266	-	L2a	LINE	L2	-1	3425	3193	3
chr7	118576611	118576612	chunk0184_272_1	11.1858	AR_DHT_Control	chr7	118575691	118576919	-40769054	-	L2a	LINE	L2	-443	2976	1653	3
chr7	118631821	118631822	chunk0184_279_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118631821	118631952	-40714021	-	L2	LINE	L2	-925	2494	2352	3
chr7	118645860	118645861	chunk0184_280_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118645262	118646014	-40699959	+	L1MB5	LINE	L1	5270	6089	-85	3
chr7	118660897	118660898	chunk0184_281_1	34.5853	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118660684	118661287	-40684686	+	HERV16-int	LTR	ERVL	1338	1930	-3066	3
chr7	118710122	118710123	chunk0184_284_1	22.0688	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	118709857	118710196	-40635777	+	L1ME3A	LINE	L1	5649	6023	-1214	3
chr7	118712023	118712024	chunk0184_286_1	30.7237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118711717	118712037	-40633936	+	L1ME3A	LINE	L1	6903	7217	-47	3
chr7	118830609	118830610	chunk0184_288_1	15.54355	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	118830376	118830989	-40514984	+	L1MB7	LINE	L1	584	1186	-6331	3
chr7	118845233	118845234	chunk0184_289_1	8.57499	AR_DHT_Control	chr7	118842051	118845316	-40500657	-	L1MA8	LINE	L1	-1730	4586	81	3
chr7	119100958	119100959	chunk0184_293_1	5.6425	AR_DHT_Control	chr7	119100246	119101210	-40244763	-	LTR5_Hs	LTR	ERVK	0	968	1	3
chr7	119893951	119893952	chunk0184_299_1	28.981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	119891145	119893983	-39451990	+	L1MEc	LINE	L1	1639	4521	-1798	3
chr7	119965474	119965475	chunk0184_301_1	93.2482	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	119965362	119965737	-39380236	+	MLT2B4	LTR	ERVL	1	437	-119	3
chr7	120069522	120069523	chunk0184_305_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120069204	120074689	-39271284	+	L1MA5	LINE	L1	714	6407	-1158	3
chr7	120079931	120079932	chunk0184_306_1	56.2418	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120079727	120079956	-39266017	-	LTR53	LTR	ERVL	0	519	270	3
chr7	120148524	120148525	chunk0184_309_1	39.1983	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	120148313	120149460	-39196513	-	L1MD2	LINE	L1	-455	5904	4823	3
chr7	120244005	120244006	chunk0184_317_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	120243901	120244047	-39101926	+	MIR3	SINE	MIR	30	183	-25	3
chr7	120326785	120326786	chunk0184_319_1	19.90595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	120326701	120326871	-39019102	+	L2a	LINE	L2	3252	3426	0	3
chr7	120414892	120414893	chunk0184_322_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120414790	120415306	-38930667	+	L2b	LINE	L2	1022	1539	-1880	3
chr7	120453225	120453226	chunk0184_328_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120452370	120453271	-38892702	+	L1PA13	LINE	L1	13	877	-5908	3
chr7	120503086	120503087	chunk0184_329_1	7.3267	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	120502644	120503103	-38842870	-	LTR78	LTR	ERV1	-820	484	3	3
chr7	120708883	120708884	chunk0184_338_1	64.7891	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	120708663	120708907	-38637066	+	L2a	LINE	L2	3072	3351	-75	3
chr7	120743383	120743384	chunk0184_347_1	14.60244	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120743369	120743904	-38602069	-	L2b	LINE	L2	-6	3369	2803	3
chr7	120763423	120763424	chunk0184_349_1	4.70357	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	120762894	120764181	-38581792	-	L1M1	LINE	L1	-6262	1303	8	3
chr7	120842318	120842319	chunk0184_353_1	19.0662	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	120842290	120842489	-38503484	-	L2a	LINE	L2	-2	3424	3182	3
chr7	120854905	120854906	chunk0184_357_1	6.9063	AR_DHT_Control	chr7	120854905	120854937	-38491036	+	(AC)n	Simple_repeat	Simple_repeat	1	33	0	3
chr7	121049021	121049022	chunk0184_365_1	7.33982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	121048838	121049085	-38296888	+	L2c	LINE	L2	2648	2878	-541	3
chr7	121102668	121102669	chunk0184_367_1	7.69414	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	121102085	121102933	-38243040	-	L1MEh	LINE	L1	-1243	992	85	3
chr7	121327225	121327226	chunk0184_373_1	16.78215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	121327206	121327270	-38018703	+	L2c	LINE	L2	3328	3387	0	3
chr7	121435133	121435134	chunk0184_379_1	47.2011	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	121435121	121435172	-37910801	+	(GT)n	Simple_repeat	Simple_repeat	1	51	0	3
chr7	121454871	121454872	chunk0184_382_1	10.3813	AR_DHT_Control	chr7	121454068	121457731	-37888242	-	L1MA3	LINE	L1	-3624	3941	16	3
chr7	121545064	121545065	chunk0184_386_1	10.9477	AR_DHT_Control	chr7	121544847	121545170	-37800803	+	MER92C	LTR	ERV1	1	301	-289	3
chr7	121610453	121610454	chunk0184_389_1	88.525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	121610373	121610770	-37735203	+	LTR16C	LTR	ERVL	1	439	-50	3
chr7	121623939	121623940	chunk0184_393_1	112.3798	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	121623661	121624189	-37721784	-	MamRep605	LTR?	LTR?	-52	797	258	3
chr7	121676614	121676615	chunk0184_396_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	121676329	121676764	-37669209	-	LTR16B1	LTR	ERVL	0	480	8	3
chr7	121761803	121761804	chunk0184_397_1	10.1791	AR_DHT_Control	chr7	121760867	121762351	-37583622	+	L1MB5	LINE	L1	4692	6167	-7	3
chr7	122128285	122128286	chunk0184_400_1	10.8017	AR_DHT_Control	chr7	122127768	122128322	-37217651	+	L2a	LINE	L2	2246	2813	-606	3
chr7	122577656	122577657	chunk0184_412_1	65.13912	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	122577268	122577874	-36768099	-	L1MD3	LINE	L1	-1713	6072	5431	3
chr7	122630531	122630532	chunk0184_415_1	11.6187	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	122630467	122630697	-36715276	-	L2	LINE	L2	-437	2982	2757	3
chr7	123012100	123012101	chunk0184_432_1	17.47392	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	123012049	123012177	-36333796	-	MIR	SINE	MIR	-20	242	113	3
chr7	123020164	123020165	chunk0184_434_1	12.2633	AR_DHT_Control	chr7	123018776	123022643	-36323330	-	L1MB3	LINE	L1	-2139	4237	310	3
chr7	123063025	123063026	chunk0184_437_1	5.50529	AR_DHT_Control	chr7	123062968	123063405	-36282568	-	L1PA15	LINE	L1	-3	6162	5744	3
chr7	123116866	123116867	chunk0184_439_1	80.1455	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	123116684	123116884	-36229089	+	MamRep1879	DNA	hAT-Tip100?	2	203	-13	3
chr7	123129325	123129326	chunk0184_441_1	16.1732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	123129324	123129373	-36216600	+	(TG)n	Simple_repeat	Simple_repeat	1	49	0	3
chr7	123320202	123320203	chunk0184_447_1	7.58612	AR_DHT_Control	chr7	123319906	123320637	-36025336	-	MER54B	LTR	ERVL	0	793	73	3
chr7	123408112	123408113	chunk0184_454_1	369.7738	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	123407705	123408155	-35937818	-	LTR33A	LTR	ERVL	-2	518	72	3
chr7	123425465	123425466	chunk0184_456_1	65.20743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	123424799	123425506	-35920467	+	Tigger3	DNA	TcMar-Tigger	2255	2978	-51	3
chr7	123528970	123528971	chunk0184_459_1	58.6098	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	123528936	123528992	-35816981	+	A-rich	Low_complexity	Low_complexity	1	58	0	3
chr7	123637480	123637481	chunk0184_462_1	8.52761	AR_DHT_Control	chr7	123637193	123638346	-35707627	+	L2b	LINE	L2	1718	2970	-449	3
chr7	123648234	123648235	chunk0184_463_1	17.83587	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	123647989	123648284	-35697689	+	Arthur1C	DNA	hAT-Tip100	59	363	0	3
chr7	123735006	123735007	chunk0185_2_1	6.88185	AR_DHT_Control	chr7	123734992	123735349	-35610624	+	HAL1ME	LINE	L1	835	1193	-1272	3
chr7	123757699	123757700	chunk0185_4_1	10.3842	AR_DHT_Control	chr7	123757377	123757849	-35588124	-	ERVL-E-int	LTR	ERVL	-2231	2995	2514	3
chr7	123767457	123767458	chunk0185_5_1	15.68651	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	123767349	123767871	-35578102	-	MLT1K	LTR	ERVL-MaLR	-69	526	1	3
chr7	123824843	123824844	chunk0185_11_1	16.56538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	123824827	123824910	-35521063	+	L2a	LINE	L2	3348	3426	0	3
chr7	123844376	123844377	chunk0185_12_1	41.31	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	123838984	123845154	-35500819	-	L1PA6	LINE	L1	0	6154	9	3
chr7	123901100	123901101	chunk0185_13_1	7.83221	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	123900649	123901692	-35444281	+	LTR49-int	LTR	ERV1	4533	5592	-739	3
chr7	123957110	123957111	chunk0185_15_1	138.25417	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	123957102	123957474	-35388499	-	L2b	LINE	L2	-62	3313	2912	3
chr7	124331018	124331019	chunk0185_34_1	25.8414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	124331011	124331744	-35014229	+	L1MC4	LINE	L1	7082	7896	-146	3
chr7	124488543	124488544	chunk0185_40_1	13.06941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	124488196	124489044	-34856929	+	L1MC4a	LINE	L1	6986	7882	0	3
chr7	124502509	124502510	chunk0185_42_1	4.96282	AR_DHT_Control	chr7	124502490	124502703	-34843270	-	MIR	SINE	MIR	-30	232	14	3
chr7	124543013	124543014	chunk0185_45_1	5.77762	AR_DHT_Control	chr7	124542860	124543675	-34802298	-	L1MA10	LINE	L1	-5	6329	5524	3
chr7	124606494	124606495	chunk0185_46_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	124606400	124606952	-34739021	-	L1M6	LINE	L1	-4862	1634	1080	3
chr7	124737960	124737961	chunk0185_52_1	24.62215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	124737931	124739071	-34606902	-	L1MCa	LINE	L1	-5341	1167	25	3
chr7	124747576	124747577	chunk0185_54_1	6.83265	AR_DHT_Control	chr7	124747568	124747647	-34598326	-	MIR3	SINE	MIR	-3	205	127	3
chr7	124828993	124828994	chunk0185_61_1	32.74584	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	124828896	124829000	-34516973	+	CR1-L3A_Croc	LINE	CR1	3704	3807	-481	3
chr7	124919962	124919963	chunk0185_65_1	128.1084	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	124919814	124920093	-34425880	+	LTR75B	LTR	ERVL	186	605	-3	3
chr7	125203453	125203454	chunk0185_74_1	16.17907	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	125202880	125203742	-34142231	-	L1ME1	LINE	L1	-23	6156	5273	3
chr7	125238497	125238498	chunk0185_75_1	9.21264	AR_DHT_Control	chr7	125237820	125238647	-34107326	-	L1MEf	LINE	L1	-2921	3225	2346	3
chr7	125485023	125485024	chunk0185_90_1	263.5906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr7	125484858	125485660	-33860313	+	L1MC2	LINE	L1	5559	6334	-10	3
chr7	125486876	125486877	chunk0185_93_1	11.1835	AR_DHT_Control	chr7	125486598	125487109	-33858864	+	L1MC3	LINE	L1	6870	7385	-400	3
chr7	125563325	125563326	chunk0185_98_1	38.3554	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	125562754	125563548	-33782425	+	L1M7	LINE	L1	965	1765	-4453	3
chr7	125579020	125579021	chunk0185_101_1	4.83532	AR_DHT_Control	chr7	125578910	125579958	-33766015	+	MER4B-int	LTR	ERV1	3399	4472	-2286	3
chr7	125640918	125640919	chunk0185_104_1	17.99742	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	125640897	125641017	-33704956	-	L2c	LINE	L2	-1	3386	3273	3
chr7	125648760	125648761	chunk0185_105_1	10.3925	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	125648500	125649633	-33696340	-	L1MCb	LINE	L1	-5486	1265	19	3
chr7	125651519	125651520	chunk0185_107_1	36.8874	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	125649609	125651745	-33694228	+	L1MB3	LINE	L1	3961	6182	-1	3
chr7	125660259	125660260	chunk0185_108_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	125659854	125660482	-33685491	+	LTR9	LTR	ERV1	1	601	-11	3
chr7	125758626	125758627	chunk0185_112_1	6.18774	AR_DHT_Control	chr7	125758495	125759074	-33586899	+	L1M2	LINE	L1	2123	2665	-4184	3
chr7	125834425	125834426	chunk0185_113_1	26.9712	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	125834272	125834802	-33511171	-	MER76	LTR	ERVL	-74	617	1	3
chr7	125906497	125906498	chunk0185_115_1	4.06817	AR_DHT_Control	chr7	125906389	125906764	-33439209	+	MER77	LTR	ERVL	165	595	-9	3
chr7	126016224	126016225	chunk0185_119_1	49.33043	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	126015744	126016353	-33329620	-	L1MC1	LINE	L1	-5517	991	369	3
chr7	126440704	126440705	chunk0185_125_1	72.3715	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	126440434	126440834	-32905139	+	Tigger3b	DNA	TcMar-Tigger	825	1229	-2	3
chr7	126450834	126450835	chunk0185_127_1	9.56998	AR_DHT_Control	chr7	126450831	126450935	-32895038	+	L2a	LINE	L2	2207	2309	-1110	3
chr7	126739926	126739927	chunk0185_128_1	6.98475	AR_DHT_Control	chr7	126739733	126740060	-32605913	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	3
chr7	127018603	127018604	chunk0185_136_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	127018509	127019019	-32326954	+	MLT1J	LTR	ERVL-MaLR	4	512	0	3
chr7	127674230	127674231	chunk0185_150_1	41.00138	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	127674199	127674473	-31671500	-	L1MC4	LINE	L1	-1243	6799	6459	3
chr7	127699273	127699274	chunk0185_153_1	15.5424	AR_DHT_Control	chr7	127699257	127699394	-31646579	-	L2a	LINE	L2	-14	3412	3204	3
chr7	127741460	127741461	chunk0185_159_1	16.90684	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	127741417	127741545	-31604428	+	MER5B	DNA	hAT-Charlie	24	153	-25	3
chr7	127759227	127759228	chunk0185_162_1	18.25564	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	127759202	127759297	-31586676	-	L1MC4	LINE	L1	-681	7361	7263	3
chr7	127884297	127884298	chunk0185_167_1	30.34514	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	127884037	127884335	-31461638	-	L1MC4	LINE	L1	-959	7083	6608	3
chr7	128138475	128138476	chunk0185_182_1	21.72174	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	128137801	128139362	-31206611	+	L1ME3Cz	LINE	L1	578	2354	-3792	3
chr7	128200269	128200270	chunk0185_184_1	17.1403	AR_DHT_Control	chr7	128200213	128200560	-31145413	-	L2c	LINE	L2	-1	3386	3025	3
chr7	128259853	128259854	chunk0185_188_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	128259619	128260078	-31085895	-	LTR8	LTR	ERV1	0	691	249	3
chr7	128342197	128342198	chunk0185_191_1	24.74216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	128342184	128342245	-31003728	-	MER112	DNA	hAT-Charlie	-191	70	2	3
chr7	128386495	128386496	chunk0185_193_1	29.4655	AR_DHT_Control	chr7	128386406	128386928	-30959045	+	MLT2B4	LTR	ERVL	1	560	0	3
chr7	128427479	128427480	chunk0185_197_1	13.5467	AR_DHT_Control	chr7	128427428	128427786	-30918187	+	MER119	DNA	hAT-Charlie	93	510	-73	3
chr7	128435442	128435443	chunk0185_198_1	56.1665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	128435324	128436192	-30909781	+	L1MEd	LINE	L1	386	1246	-5840	3
chr7	128448901	128448902	chunk0185_199_1	36.20335	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	128448835	128449202	-30896771	-	L2a	LINE	L2	0	3426	3041	3
chr7	128450151	128450152	chunk0185_200_1	18.26761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	128450093	128450448	-30895525	-	L1MEd	LINE	L1	-5198	1888	1527	3
chr7	128565619	128565620	chunk0185_206_1	56.3086	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	128565578	128566116	-30779857	-	L1MD2	LINE	L1	-462	5897	5366	3
chr7	128727277	128727278	chunk0185_208_1	6.13982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	128727177	128727511	-30618462	-	L2c	LINE	L2	0	3387	3039	3
chr7	128745895	128745896	chunk0185_209_1	35.2502	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	128745843	128746151	-30599822	-	L1ME3G	LINE	L1	-57	867	568	3
chr7	128786019	128786020	chunk0185_214_1	160.0343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	128785931	128786529	-30559444	+	L1MEd	LINE	L1	724	1488	-977	3
chr7	129074157	129074158	chunk0185_221_1	7.82111	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	129073961	129074474	-30271499	-	LTR105_Mam	LTR	ERVL	-43	557	1	3
chr7	129348249	129348250	chunk0185_231_1	15.17672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	129348129	129348552	-29997421	+	L1ME4b	LINE	L1	432	859	-33	3
chr7	129361066	129361067	chunk0185_232_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	129360980	129361142	-29984831	+	MER5A1	DNA	hAT-Charlie	3	166	0	3
chr7	129861373	129861374	chunk0185_241_1	14.58144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	129861306	129861380	-29484593	+	L1ME4a	LINE	L1	5954	6031	-93	3
chr7	129998694	129998695	chunk0185_243_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	129998559	129998904	-29347069	-	L2c	LINE	L2	-553	2866	2497	3
chr7	130095964	130095965	chunk0185_247_1	9.21264	AR_DHT_Control	chr7	130095909	130096098	-29249875	+	L2b	LINE	L2	3198	3383	-4	3
chr7	130109448	130109449	chunk0185_248_1	28.9116	AR_DHT_Control	chr7	130109434	130109635	-29236338	-	L1MC4	LINE	L1	-180	7862	7707	3
chr7	130368948	130368949	chunk0185_258_1	234.05312	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr7	130368938	130369029	-28976944	-	MamTip2	DNA	hAT-Tip100	-98	207	107	3
chr7	130423791	130423792	chunk0185_263_1	39.96464	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	130423247	130423946	-28922027	+	L1MB7	LINE	L1	5275	5979	-205	3
chr7	130659527	130659528	chunk0185_268_1	76.2519	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	130659384	130659631	-28686342	+	L1ME3C	LINE	L1	5618	5875	-248	3
chr7	130786285	130786286	chunk0185_270_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	130785909	130786604	-28559369	-	L1ME2	LINE	L1	-4935	2233	1534	3
chr7	131050732	131050733	chunk0185_289_1	69.1504	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	131050470	131050900	-28295073	+	L2a	LINE	L2	2960	3425	-1	3
chr7	131062024	131062025	chunk0185_291_1	10.1791	AR_DHT_Control	chr7	131061808	131062161	-28283812	+	LTR87	LTR	ERVL?	267	614	-10	3
chr7	131145238	131145239	chunk0185_297_1	6.0927	AR_DHT_Control	chr7	131145086	131145523	-28200450	+	CR1-3_Croc	LINE	CR1	2156	2604	-1001	3
chr7	131186950	131186951	chunk0185_300_1	7.87682	AR_DHT_Control	chr7	131186848	131187063	-28158910	-	L2c	LINE	L2	-226	3200	2976	3
chr7	131325166	131325167	chunk0185_308_1	21.11767	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	131325098	131325408	-28020565	-	L2a	LINE	L2	0	3426	3128	3
chr7	131357518	131357519	chunk0185_309_1	87.5974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	131357353	131357912	-27988061	-	L1MC3	LINE	L1	-523	7262	6664	3
chr7	131363852	131363853	chunk0185_312_1	105.2714	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	131363610	131363990	-27981983	+	L2a	LINE	L2	3021	3424	-2	3
chr7	131401058	131401059	chunk0185_315_1	129.45991	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr7	131400909	131401145	-27944828	+	UCON4	Unknown	Unknown	3	227	-76	3
chr7	131453271	131453272	chunk0185_318_1	33.6895	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	131453203	131453421	-27892552	+	L1M5	LINE	L1	4643	4898	-1248	3
chr7	131672271	131672272	chunk0185_328_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	131672155	131672432	-27673541	+	MLT1I	LTR	ERVL-MaLR	64	366	-45	3
chr7	131927954	131927955	chunk0185_330_1	5.37069	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	131927925	131927958	-27418015	+	(AC)n	Simple_repeat	Simple_repeat	1	32	0	3
chr7	131934648	131934649	chunk0185_331_1	27.74802	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	131934567	131934813	-27411160	-	L2b	LINE	L2	0	3375	3121	3
chr7	132007615	132007616	chunk0185_336_1	22.63309	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	132006232	132007696	-27338277	-	L1ME2	LINE	L1	-10	7085	5563	3
chr7	132158526	132158527	chunk0185_344_1	15.1238	AR_DHT_Control	chr7	132158518	132158720	-27187253	-	MIR	SINE	MIR	-1	261	48	3
chr7	132627439	132627440	chunk0185_361_1	10.3593	AR_DHT_Control	chr7	132627196	132627512	-26718461	-	HAL1	LINE	L1	-148	2359	2005	3
chr7	132874130	132874131	chunk0185_366_1	6.62784	AR_DHT_Control	chr7	132874078	132874188	-26471785	-	L2a	LINE	L2	-2	3424	3309	3
chr7	132894661	132894662	chunk0185_369_1	9.21264	AR_DHT_Control	chr7	132894498	132894702	-26451271	+	L2b	LINE	L2	3213	3425	-1	3
chr7	132944950	132944951	chunk0185_373_1	83.7074	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	132944946	132945178	-26400795	-	L1M5	LINE	L1	-1834	4312	4054	3
chr7	133029532	133029533	chunk0185_375_1	10.2513	AR_DHT_Control	chr7	133029150	133029533	-26316440	-	L1MA7	LINE	L1	-10	6324	5863	3
chr7	133059959	133059960	chunk0185_376_1	25.60524	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	133059859	133060011	-26285962	-	L2b	LINE	L2	-2	3373	3215	3
chr7	133179075	133179076	chunk0185_379_1	10.4206	AR_DHT_Control	chr7	133178395	133179374	-26166599	+	HAL1	LINE	L1	1480	2501	-6	3
chr7	133240046	133240047	chunk0185_381_1	12.1906	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	133239990	133240426	-26105547	+	Helitron1Na_Mam	RC	Helitron	28	475	-587	3
chr7	133383358	133383359	chunk0185_386_1	193.7378	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	133383348	133383476	-25962497	+	MIR3	SINE	MIR	12	149	-59	3
chr7	133405963	133405964	chunk0185_389_1	10.90027	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	133405922	133406003	-25939970	-	L2a	LINE	L2	-6	3420	3280	3
chr7	133430611	133430612	chunk0185_391_1	17.00258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	133430474	133430727	-25915246	-	L1MB7	LINE	L1	-379	5805	5539	3
chr7	133724811	133724812	chunk0185_396_1	20.0646	AR_DHT_Control	chr7	133724468	133725039	-25620934	-	L2a	LINE	L2	-9	3417	2798	3
chr7	133978005	133978006	chunk0185_404_1	87.4605	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	133977910	133978324	-25367649	+	MER57B2	LTR	ERV1	3	510	0	3
chr7	134002882	134002883	chunk0185_405_1	13.3321	AR_DHT_Control	chr7	134002301	134003467	-25342506	+	L1ME1	LINE	L1	4968	6169	-10	3
chr7	134079163	134079164	chunk0185_409_1	20.61599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	134079012	134079588	-25266385	-	LTR82B	LTR	ERVL	-6	824	180	3
chr7	134261062	134261063	chunk0185_410_1	11.5664	AR_DHT_Control	chr7	134260344	134261174	-25084799	-	L1MB4	LINE	L1	-5491	1258	11	3
chr7	134261811	134261812	chunk0185_411_1	65.48987	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	134261711	134261948	-25084025	-	MER58A	DNA	hAT-Charlie	-4	220	1	3
chr7	134297635	134297636	chunk0185_415_1	25.92399	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	134297220	134297729	-25048244	+	L1ME4c	LINE	L1	225	769	-61	3
chr7	134300192	134300193	chunk0185_416_1	7.23138	AR_DHT_Control	chr7	134300125	134300253	-25045720	+	OldhAT1	DNA	hAT-Ac	1931	2061	-787	3
chr7	134554083	134554084	chunk0185_423_1	29.3085	AR_DHT_Control	chr7	134551541	134557372	-24788601	+	HERVS71-int	LTR	ERV1	3073	8909	-69	3
chr7	134708923	134708924	chunk0185_427_1	25.96951	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	134708835	134709010	-24636963	+	MIRc	SINE	MIR	2	205	-63	3
chr7	134759480	134759481	chunk0185_429_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	134759198	134759603	-24586370	-	L2c	LINE	L2	-3	3384	2941	3
chr7	135009135	135009136	chunk0185_447_1	14.1597	AR_DHT_Control	chr7	135006915	135009441	-24336532	+	L1MB7	LINE	L1	3374	5962	-222	3
chr7	135010837	135010838	chunk0185_448_1	17.17371	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	135010723	135012506	-24333467	+	L1ME3B	LINE	L1	4380	6210	-32	3
chr7	135012420	135012421	chunk0185_449_1	8.9624	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135010723	135012506	-24333467	+	L1ME3B	LINE	L1	4380	6210	-32	3
chr7	135074374	135074375	chunk0185_451_1	8.27376	AR_DHT_Control	chr7	135074234	135074470	-24271503	-	MLT1K	LTR	ERVL-MaLR	-326	269	11	3
chr7	135095425	135095426	chunk0185_452_1	10.0893	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135095089	135095601	-24250372	+	L1MCb	LINE	L1	462	978	-5067	3
chr7	135157878	135157879	chunk0185_454_1	4.9245	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	135157123	135159289	-24186684	-	L1M2a1	LINE	L1	-5150	1966	1	3
chr7	135376359	135376360	chunk0185_457_1	5.52722	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135376279	135376381	-23969592	-	MamRTE1	LINE	RTE-BovB	-653	3159	3048	3
chr7	135458003	135458004	chunk0185_461_1	93.7817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	135457962	135458101	-23887872	-	L1M5	LINE	L1	-319	5805	5659	3
chr7	135463860	135463861	chunk0185_462_1	5.55081	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135463561	135464666	-23881307	+	L1PA14	LINE	L1	5044	6144	-17	3
chr7	135477548	135477549	chunk0186_1_1	8.27376	AR_DHT_Control	chr7	135477450	135477693	-23868280	-	L1ME4b	LINE	L1	-127	765	519	3
chr7	135493543	135493544	chunk0186_2_1	22.8396	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135493406	135493783	-23852190	-	L2	LINE	L2	-2897	522	107	3
chr7	135502017	135502018	chunk0186_6_1	5.54895	AR_DHT_Control	chr7	135501844	135502216	-23843757	+	MSTD	LTR	ERVL-MaLR	1	396	0	3
chr7	135675326	135675327	chunk0186_11_1	72.8634	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	135675185	135675605	-23670368	-	L1ME4b	LINE	L1	-49	843	375	3
chr7	135678483	135678484	chunk0186_13_1	16.51919	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135678266	135678552	-23667421	+	MamRep137	DNA	TcMar-Tigger	75	390	-120	3
chr7	135930714	135930715	chunk0186_25_1	26.30048	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	135930662	135930774	-23415199	+	L2a	LINE	L2	3247	3395	-31	3
chr7	135931258	135931259	chunk0186_26_1	11.82056	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	135931143	135931451	-23414522	-	L2c	LINE	L2	-3	3384	3060	3
chr7	136027431	136027432	chunk0186_33_1	7.30819	AR_DHT_Control	chr7	136027259	136028904	-23317069	+	L2c	LINE	L2	1586	3349	-38	3
chr7	136036457	136036458	chunk0186_38_1	36.7054	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	136036386	136036645	-23309328	+	Tigger19b	DNA	TcMar-Tigger	50	314	-236	3
chr7	136195355	136195356	chunk0186_47_1	8.13469	AR_DHT_Control	chr7	136194313	136197213	-23148760	-	L1MA4A	LINE	L1	-11	6994	4031	3
chr7	136202571	136202572	chunk0186_48_1	14.77659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	136201948	136202649	-23143324	-	L1M5	LINE	L1	-2180	3966	3227	3
chr7	136376515	136376516	chunk0186_54_1	40.7042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	136376469	136376566	-22969407	-	MIR3	SINE	MIR	-15	193	94	3
chr7	136402736	136402737	chunk0186_56_1	75.2278	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	136402681	136403878	-22942095	+	Tigger3b	DNA	TcMar-Tigger	3	1231	0	3
chr7	136682279	136682280	chunk0186_60_1	7.09019	AR_DHT_Control	chr7	136682006	136682742	-22663231	+	L1MC1	LINE	L1	5469	6198	-135	3
chr7	137055192	137055193	chunk0186_66_1	6.05102	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	137055133	137055441	-22290532	+	L1M5	LINE	L1	3725	4038	-2108	3
chr7	137084164	137084165	chunk0186_67_1	6.48643	AR_DHT_Control	chr7	137083963	137084212	-22261761	-	MIR	SINE	MIR	0	262	5	3
chr7	137162609	137162610	chunk0186_68_1	4.5547	AR_DHT_Control	chr7	137162411	137162796	-22183177	+	L1M6	LINE	L1	1049	1445	-5051	3
chr7	137196249	137196250	chunk0186_72_1	31.235	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	137196231	137196262	-22149711	+	(TGTA)n	Simple_repeat	Simple_repeat	1	32	0	3
chr7	137197567	137197568	chunk0186_74_1	26.44234	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	137197356	137198758	-22147215	-	L1MD1	LINE	L1	-4694	1548	48	3
chr7	137209684	137209685	chunk0186_76_1	23.347	AR_DHT_Control	chr7	137209653	137209703	-22136270	-	LTR16B	LTR	ERVL	-413	50	1	3
chr7	137266961	137266962	chunk0186_80_1	35.31494	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	137266875	137267961	-22078012	-	Harlequin-int	LTR	ERV1	-5552	1344	263	3
chr7	137581723	137581724	chunk0186_98_1	260.84011	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	137581573	137581786	-21764187	+	MIRc	SINE	MIR	47	256	-12	3
chr7	137622681	137622682	chunk0186_101_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	137622471	137622724	-21723249	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr7	138038929	138038930	chunk0186_113_1	12.1886	AR_DHT_Control	chr7	138038618	138042216	-21303757	+	L1PA6	LINE	L1	2552	6149	-5	3
chr7	138049890	138049891	chunk0186_115_1	23.32385	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	138049880	138050005	-21295968	+	AluJr	SINE	Alu	158	282	-30	3
chr7	138074252	138074253	chunk0186_116_1	8.15319	AR_DHT_Control	chr7	138074141	138074555	-21271418	-	LOR1b	LTR	ERV1	0	461	1	3
chr7	138089741	138089742	chunk0186_118_1	21.88918	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	138089680	138089753	-21256220	+	Penelope1_Vert	LINE	Penelope	653	726	-361	3
chr7	138092537	138092538	chunk0186_120_1	7.72951	AR_DHT_Control	chr7	138092424	138093071	-21252902	-	Tigger3b	DNA	TcMar-Tigger	0	1231	664	3
chr7	138096623	138096624	chunk0186_123_1	227.9898	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	138096592	138097258	-21248715	+	L2	LINE	L2	1981	2730	-689	3
chr7	138238065	138238066	chunk0186_127_1	14.4295	AR_DHT_Control	chr7	138238050	138238517	-21107456	+	Tigger17a	DNA	TcMar-Tigger	1	462	-192	3
chr7	138247461	138247462	chunk0186_130_1	48.0431	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	138247204	138247622	-21098351	+	LTR23	LTR	ERV1	1	432	-5	3
chr7	138460458	138460459	chunk0186_132_1	4.15945	AR_DHT_Control	chr7	138460458	138460486	-20885487	+	GA-rich	Low_complexity	Low_complexity	1	28	0	3
chr7	138477445	138477446	chunk0186_134_1	49.2927	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	138477348	138477768	-20868205	+	L1MC5a	LINE	L1	758	1216	-1561	3
chr7	138499473	138499474	chunk0186_136_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	138499310	138499766	-20846207	-	MER70B	LTR	ERVL	-102	476	1	3
chr7	138514848	138514849	chunk0186_137_1	5.73469	AR_DHT_Control	chr7	138514750	138514871	-20831102	-	MIRb	SINE	MIR	-74	194	58	3
chr7	138569859	138569860	chunk0186_138_1	87.1105	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	138569836	138569946	-20776027	-	L1ME2z	LINE	L1	-21	6423	6275	3
chr7	139117866	139117867	chunk0186_154_1	22.02093	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	139117323	139117916	-20228057	-	ERV3-16A3_I-int	LTR	ERVL	-3691	1535	913	3
chr7	139251269	139251270	chunk0186_160_1	86.1099	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	139251206	139251885	-20094088	-	L1MC3	LINE	L1	-28	7757	7073	3
chr7	139270585	139270586	chunk0186_162_1	21.46505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	139270568	139270675	-20075298	-	L1ME3D	LINE	L1	-418	5824	5729	3
chr7	139318158	139318159	chunk0186_168_1	89.3756	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	139317962	139318282	-20027691	-	L1MEh	LINE	L1	-1215	1020	659	3
chr7	139431162	139431163	chunk0186_176_1	7.83042	AR_DHT_Control	chr7	139431030	139431406	-19914567	+	L1ME1	LINE	L1	5774	6171	-8	3
chr7	139447265	139447266	chunk0186_179_1	12.1886	AR_DHT_Control	chr7	139447196	139447370	-19898603	-	Tigger3c	DNA	TcMar-Tigger	-1	601	426	3
chr7	139609912	139609913	chunk0186_181_1	8.46955	AR_DHT_Control	chr7	139609818	139610053	-19735920	-	L1ME4b	LINE	L1	-261	631	423	3
chr7	139725195	139725196	chunk0186_192_1	192.8778	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	139725097	139725325	-19620648	-	L2c	LINE	L2	-51	3336	3106	3
chr7	139738422	139738423	chunk0186_196_1	21.1028	AR_DHT_Control	chr7	139738327	139738514	-19607459	+	MER3	DNA	hAT-Charlie	5	207	-2	3
chr7	139827467	139827468	chunk0186_204_1	41.4201	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	139827270	139828379	-19517594	-	L1PBa	LINE	L1	-3810	3052	1881	3
chr7	139902396	139902397	chunk0186_210_1	18.24821	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	139901933	139902967	-19443006	-	L1MD2	LINE	L1	-12	6347	5282	3
chr7	140144278	140144279	chunk0186_222_1	169.6996	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	140144085	140144507	-19201466	+	L1M4	LINE	L1	4710	5150	-996	3
chr7	140485138	140485139	chunk0186_228_1	13.2699	AR_DHT_Control	chr7	140484989	140485414	-18860559	+	LTR29	LTR	ERV1	133	587	-35	3
chr7	140604851	140604852	chunk0186_230_1	7.57442	AR_DHT_Control	chr7	140604777	140604881	-18741092	+	L2c	LINE	L2	3274	3387	0	3
chr7	140638935	140638936	chunk0186_231_1	6.13992	AR_DHT_Control	chr7	140638603	140639030	-18706943	+	L2b	LINE	L2	2918	3373	-2	3
chr7	140656815	140656816	chunk0186_233_1	5.30168	AR_DHT_Control	chr7	140655608	140657702	-18688271	+	HERV3-int	LTR	ERV1	1	2050	-6376	3
chr7	140811409	140811410	chunk0186_237_1	6.48643	AR_DHT_Control	chr7	140811375	140811805	-18534168	-	LTR55	LTR	ERVL?	-135	413	1	3
chr7	140858973	140858974	chunk0186_239_1	13.6783	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	140858842	140859151	-18486822	+	L1ME3Cz	LINE	L1	4162	4470	-1676	3
chr7	140910015	140910016	chunk0186_240_1	86.7273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	140909858	140910088	-18435885	-	MER20B	DNA	hAT-Charlie	-507	276	56	3
chr7	140913265	140913266	chunk0186_242_1	6.29759	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	140912930	140913387	-18432586	+	L2a	LINE	L2	2949	3426	0	3
chr7	140932005	140932006	chunk0186_246_1	98.4032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	140931987	140932078	-18413895	-	L2a	LINE	L2	-2	3424	3339	3
chr7	140983236	140983237	chunk0186_248_1	64.006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	140983170	140983521	-18362452	+	Tigger3a	DNA	TcMar-Tigger	6	348	0	3
chr7	141057343	141057344	chunk0186_252_1	69.35042	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	141057286	141057640	-18288333	+	LTR33A_	LTR	ERVL	1	364	-167	3
chr7	141080906	141080907	chunk0186_255_1	27.1823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	141080755	141081355	-18264618	+	Tigger3b	DNA	TcMar-Tigger	1	626	-605	3
chr7	141276726	141276727	chunk0186_256_1	6.54253	AR_DHT_Control	chr7	141276709	141277615	-18068358	-	Tigger3b	DNA	TcMar-Tigger	-42	1189	274	3
chr7	141279471	141279472	chunk0186_257_1	24.24239	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	141279152	141279472	-18066501	+	Charlie18a	DNA	hAT-Charlie	2	342	0	3
chr7	141386537	141386538	chunk0186_259_1	52.2686	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	141386495	141386622	-17959351	-	L1MA6	LINE	L1	-23	6277	6149	3
chr7	141492212	141492213	chunk0186_262_1	6.10159	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	141491864	141492540	-17853433	+	L2a	LINE	L2	2694	3426	0	3
chr7	141541645	141541646	chunk0186_263_1	5.89231	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	141541511	141542013	-17803960	+	LTR16E2	LTR	ERVL	37	568	0	3
chr7	141681796	141681797	chunk0186_270_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	141680969	141682319	-17663654	+	MLT1J-int	LTR	ERVL-MaLR	2	1387	0	3
chr7	141689698	141689699	chunk0186_271_1	11.967	AR_DHT_Control	chr7	141689618	141690001	-17655972	-	L1ME3A	LINE	L1	-52	6121	5669	3
chr7	141956246	141956247	chunk0186_277_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	141955717	141956468	-17389505	+	Charlie8	DNA	hAT-Charlie	508	1386	-1042	3
chr7	142166615	142166616	chunk0186_280_1	123.27067	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	142166569	142166727	-17179246	-	MIR3	SINE	MIR	-63	167	9	3
chr7	142234759	142234760	chunk0186_283_1	4.66817	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	142234574	142236128	-17109845	+	L1PA13	LINE	L1	1077	2665	-4120	3
chr7	142586633	142586634	chunk0186_287_1	50.8956	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142586566	142587400	-16758573	-	L2a	LINE	L2	-44	3382	2522	3
chr7	142596357	142596358	chunk0186_290_1	18.64566	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142596289	142596405	-16749568	-	L2a	LINE	L2	-3	3423	3309	3
chr7	142612672	142612673	chunk0186_294_1	29.07894	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142612298	142612852	-16733121	-	MER70B	LTR	ERVL	0	578	1	3
chr7	142895412	142895413	chunk0186_301_1	166.87	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr7	142895288	142895528	-16450445	+	MIRc	SINE	MIR	2	254	-14	3
chr7	142902047	142902048	chunk0186_306_1	4.33434	AR_DHT_Control	chr7	142901836	142902324	-16443649	-	L2	LINE	L2	-1236	2183	1632	3
chr7	142927395	142927396	chunk0186_308_1	31.2053	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142927086	142927405	-16418568	+	L2c	LINE	L2	3046	3371	-16	3
chr7	142949643	142949644	chunk0186_309_1	18.91025	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	142949394	142949663	-16396310	+	L2a	LINE	L2	3149	3426	0	3
chr7	143003112	143003113	chunk0186_313_1	176.6529	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	143002898	143003326	-16342647	+	LTR16B2	LTR	ERVL	1	462	0	3
chr7	143080093	143080094	chunk0186_322_1	24.4291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143077192	143080467	-16265506	+	L1PB1	LINE	L1	258	3595	-3267	3
chr7	143121218	143121219	chunk0186_325_1	16.53172	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143120808	143121405	-16224568	-	MER4A1_	LTR	ERV1	0	600	1	3
chr7	143141525	143141526	chunk0186_327_1	35.8067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143141413	143141556	-16204417	-	L2a	LINE	L2	0	3426	3280	3
chr7	143155403	143155404	chunk0186_329_1	79.3324	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143155380	143155511	-16190462	-	ERVL-E-int	LTR	ERVL	-1361	3865	3731	3
chr7	143172560	143172561	chunk0186_331_1	22.65536	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143172435	143173191	-16172782	+	BLACKJACK	DNA	hAT-Blackjack	320	1099	-1870	3
chr7	143231086	143231087	chunk0186_333_1	9.56998	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	143230509	143231378	-16114595	+	(CA)n	Simple_repeat	Simple_repeat	1	896	0	3
chr7	143244480	143244481	chunk0186_335_1	145.4243	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143244472	143244580	-16101393	-	UCON99	DNA	DNA	-63	308	202	3
chr7	143370435	143370436	chunk0186_343_1	13.02724	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143370360	143370905	-15975068	+	MER41A	LTR	ERV1	1	554	0	3
chr7	143395696	143395697	chunk0186_344_1	36.1377	AR_DHT_Control	chr7	143395678	143395774	-15950199	+	L2b	LINE	L2	3289	3382	-5	3
chr7	143408764	143408765	chunk0186_345_1	4.83664	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143408761	143408804	-15937169	+	(AGCACC)n	Simple_repeat	Simple_repeat	1	44	0	3
chr7	143474193	143474194	chunk0186_351_1	4.51651	AR_DHT_Control	chr7	143472744	143474778	-15871195	+	L1MA9	LINE	L1	1918	4110	-3051	3
chr7	143487664	143487665	chunk0186_353_1	8.36569	AR_DHT_Control	chr7	143487451	143487672	-15858301	+	L4_B_Mam	LINE	RTE-X	3918	4147	-794	3
chr7	143849988	143849989	chunk0186_357_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143846343	143850749	-15495224	+	L1MA6	LINE	L1	3168	7719	0	3
chr7	143887825	143887826	chunk0186_359_1	34.3494	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143887527	143888067	-15457906	+	L1ME3A	LINE	L1	5616	6187	-55	3
chr7	143896436	143896437	chunk0186_361_1	6.75904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	143895853	143897131	-15448842	+	L1ME3D	LINE	L1	1955	3372	-2774	3
chr7	143967562	143967563	chunk0186_369_1	19.9017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	143967460	143967849	-15378124	-	Tigger3a	DNA	TcMar-Tigger	0	348	6	3
chr7	144097475	144097476	chunk0186_373_1	11.1716	AR_DHT_Control	chr7	144097076	144098061	-15247912	+	L1M5	LINE	L1	4176	5214	-932	3
chr7	144415095	144415096	chunk0186_385_1	10.1791	AR_DHT_Control	chr7	144413306	144415119	-14930854	-	L1MEc	LINE	L1	-4380	2035	37	3
chr7	144448890	144448891	chunk0186_386_1	8.16452	AR_DHT_Control	chr7	144448889	144448994	-14896979	-	L2a	LINE	L2	-13	3413	3296	3
chr7	144499918	144499919	chunk0186_387_1	9.01771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	144499756	144499998	-14845975	-	L1M5	LINE	L1	-3584	2562	2304	3
chr7	144513176	144513177	chunk0186_391_1	5.2782	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	144513013	144513182	-14832791	-	L2a	LINE	L2	0	3426	3266	3
chr7	144607643	144607644	chunk0186_392_1	42.976	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	144607559	144607838	-14738135	-	L2a	LINE	L2	-4	3422	3146	3
chr7	144796959	144796960	chunk0186_406_1	5.66005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	144796336	144797987	-14547986	+	L1PA10	LINE	L1	1	1683	-4670	3
chr7	145566569	145566570	chunk0186_409_1	53.5599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	145566562	145566785	-13779188	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr7	145810821	145810822	chunk0186_410_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	145810100	145811381	-13534592	+	L1M1	LINE	L1	12	1372	-6193	3
chr7	146128485	146128486	chunk0186_411_1	9.99437	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	146128357	146128518	-13217455	-	L3	LINE	CR1	-166	3933	3764	3
chr7	146492232	146492233	chunk0186_418_1	9.62915	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	146492207	146492275	-12853698	+	GA-rich	Low_complexity	Low_complexity	1	71	0	3
chr7	146557833	146557834	chunk0186_419_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	146557778	146558188	-12787785	-	LTR82B	LTR	ERVL	-1	829	405	3
chr7	146682245	146682246	chunk0186_429_1	46.1996	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	146682212	146682250	-12663723	+	(AT)n	Simple_repeat	Simple_repeat	1	38	0	3
chr7	146715340	146715341	chunk0186_433_1	8.91509	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	146715048	146715352	-12630621	+	AluSq2	SINE	Alu	1	303	-10	3
chr7	146992537	146992538	chunk0186_435_1	181.34133	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	146992349	146992678	-12353295	-	MER61A	LTR	ERV1	0	341	1	3
chr7	147034002	147034003	chunk0186_437_1	5.0921	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	147033827	147034304	-12311669	-	MER66D	LTR	ERV1	-36	598	77	3
chr7	147040051	147040052	chunk0186_438_1	4.32388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	147039824	147040233	-12305740	+	L1PA14	LINE	L1	5010	5401	-745	3
chr7	147579323	147579324	chunk0186_441_1	25.36622	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	147579318	147579416	-11766557	-	L2a	LINE	L2	0	3426	3309	3
chr7	147677415	147677416	chunk0186_442_1	58.6574	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	147676378	147677983	-11667990	-	L1MA8	LINE	L1	0	6291	4684	3
chr7	148191436	148191437	chunk0186_450_1	13.2275	AR_DHT_Control	chr7	148191060	148191484	-11154489	+	MSTD	LTR	ERVL-MaLR	1	396	0	3
chr7	148204869	148204870	chunk0186_451_1	6.04605	AR_DHT_Control	chr7	148204788	148205008	-11140965	+	MIRb	SINE	MIR	19	247	-21	3
chr7	148276616	148276617	chunk0186_452_1	5.6425	AR_DHT_Control	chr7	148276194	148276635	-11069338	-	LTR16C	LTR	ERVL	0	489	1	3
chr7	148428658	148428659	chunk0187_111_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	148428585	148429455	-10916518	+	L1PA7	LINE	L1	2531	3397	-3064	3
chr7	148437376	148437377	chunk0187_112_1	7.64898	AR_DHT_Control	chr7	148436928	148437780	-10908193	-	LTR1A2	LTR	ERV1	0	837	1	3
chr7	148447941	148447942	chunk0187_113_1	30.87626	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	148447808	148447943	-10898030	-	MIRc	SINE	MIR	-19	249	85	3
chr7	148579210	148579211	chunk0187_115_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	148578995	148579309	-10766664	-	HERVL-int	LTR	ERVL	-1997	3657	3326	3
chr7	148875380	148875381	chunk0187_117_1	9.34963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	148875346	148875866	-10470107	+	L1M4	LINE	L1	5221	5812	-1973	3
chr7	149081661	149081662	chunk0187_122_1	13.53803	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	149081501	149081730	-10264243	-	L1ME4b	LINE	L1	-488	404	165	3
chr7	149130618	149130619	chunk0187_124_1	5.86499	AR_DHT_Control	chr7	149130395	149130681	-10215292	-	L1ME1	LINE	L1	-455	5724	5454	3
chr7	149206213	149206214	chunk0187_130_1	28.95622	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	149206151	149206254	-10139719	-	L2a	LINE	L2	-14	3412	3304	3
chr7	149271850	149271851	chunk0187_134_1	6.48643	AR_DHT_Control	chr7	149271237	149272008	-10073965	-	L1MC5	LINE	L1	-1426	7878	7024	3
chr7	149490312	149490313	chunk0187_137_1	4.15945	AR_DHT_Control	chr7	149490290	149491214	-9854759	-	L2a	LINE	L2	-2028	1391	178	3
chr7	149547411	149547412	chunk0187_139_1	11.1005	AR_DHT_Control	chr7	149547103	149547540	-9798433	-	MER70B	LTR	ERVL	-126	452	2	3
chr7	149586853	149586854	chunk0187_140_1	19.13525	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	149586719	149586958	-9759015	-	ERVL-E-int	LTR	ERVL	-4574	1093	858	3
chr7	149626269	149626270	chunk0187_143_1	11.63566	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	149626235	149626382	-9719591	-	Arthur1A	DNA	hAT-Tip100	-1	176	12	3
chr7	149659726	149659727	chunk0187_145_1	15.44238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	149659599	149661325	-9684648	-	L1PBa	LINE	L1	-2952	3910	2106	3
chr7	150003487	150003488	chunk0187_151_1	19.53232	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	150003182	150004275	-9341698	+	(GT)n	Simple_repeat	Simple_repeat	1	1178	0	3
chr7	150190122	150190123	chunk0187_155_1	19.8997	AR_DHT_Control	chr7	150188822	150190710	-9155263	-	L1MC4	LINE	L1	-1260	7577	5581	3
chr7	150651570	150651571	chunk0187_162_1	28.14136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	150650491	150652193	-8693780	-	L1PB1	LINE	L1	-8	6609	4867	3
chr7	150726121	150726122	chunk0187_167_1	29.6508	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	150725913	150726184	-8619789	+	L1MEd	LINE	L1	499	789	-5436	3
chr7	150736173	150736174	chunk0187_169_1	195.201	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	150735947	150736651	-8609322	+	MER67C	LTR	ERV1	1	706	-5	3
chr7	150765761	150765762	chunk0187_170_1	40.2533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	150765692	150765977	-8579996	-	MER31-int	LTR	ERV1	-4	5352	5055	3
chr7	150903841	150903842	chunk0187_173_1	19.33279	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	150903711	150903884	-8442089	-	L3b	LINE	CR1	-492	4740	4565	3
chr7	150911903	150911904	chunk0187_176_1	88.87934	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	150911735	150912454	-8433519	+	LTR83	LTR	ERVL	8	749	-31	3
chr7	150919071	150919072	chunk0187_177_1	9.1484	AR_DHT_Control	chr7	150918938	150919816	-8426157	-	L1MC3	LINE	L1	0	7785	6845	3
chr7	150929155	150929156	chunk0187_178_1	53.9789	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	150927933	150929968	-8416005	+	L1MC5	LINE	L1	6771	8713	-591	3
chr7	150967463	150967464	chunk0187_180_1	9.35087	AR_DHT_Control	chr7	150967284	150968696	-8377277	+	L1ME5	LINE	L1	4660	6094	-100	3
chr7	151299801	151299802	chunk0187_184_1	10.4381	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	151299421	151299825	-8046148	+	(TGTGTG)n	Simple_repeat	Simple_repeat	1	402	0	3
chr7	151304919	151304920	chunk0187_185_1	54.6291	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	151304883	151305648	-8040325	-	HAL1	LINE	L1	-27	2480	1566	3
chr7	151313111	151313112	chunk0187_187_1	7.17788	AR_DHT_Control	chr7	151312637	151313973	-8032000	+	(GT)n	Simple_repeat	Simple_repeat	1	1358	0	3
chr7	151721877	151721878	chunk0187_193_1	17.46061	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	151721863	151721971	-7624002	+	L2c	LINE	L2	3043	3160	-227	3
chr7	151797854	151797855	chunk0187_203_1	6.77976	AR_DHT_Control	chr7	151797840	151797932	-7548041	+	MER112	DNA	hAT-Charlie	5	99	-162	3
chr7	151806456	151806457	chunk0187_205_1	7.03383	AR_DHT_Control	chr7	151806381	151806547	-7539426	+	Charlie19a	DNA	hAT-Charlie	43	218	-168	3
chr7	151819391	151819392	chunk0187_206_1	22.27336	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	151819043	151819523	-7526450	+	LTR82B	LTR	ERVL	284	826	-4	3
chr7	151831268	151831269	chunk0187_209_1	21.19718	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	151830935	151831478	-7514495	+	L1MB8	LINE	L1	5345	5900	-278	3
chr7	151923741	151923742	chunk0187_213_1	207.6782	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	151923602	151923773	-7422200	-	L2c	LINE	L2	-9	3378	3201	3
chr7	152012130	152012131	chunk0187_216_1	4.96282	AR_DHT_Control	chr7	152012128	152012213	-7333760	-	MLT1H	LTR	ERVL-MaLR	-340	149	62	3
chr7	152144104	152144105	chunk0187_218_1	25.70363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	152144078	152144256	-7201717	-	L2	LINE	L2	-927	2492	2318	3
chr7	152255585	152255586	chunk0187_223_1	30.9085	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	152255463	152255887	-7090086	+	L1MC4a	LINE	L1	4567	5033	-1113	3
chr7	152361863	152361864	chunk0187_228_1	55.4682	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	152361795	152361900	-6984073	+	L1MEd	LINE	L1	2462	2574	-3572	3
chr7	152403900	152403901	chunk0187_229_1	8.18946	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	152403759	152404078	-6941895	+	L1PA16	LINE	L1	5797	6154	-12	3
chr7	153032786	153032787	chunk0187_246_1	137.2783	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	153031967	153033010	-6312963	+	L1MEd	LINE	L1	509	1607	-5479	3
chr7	153843161	153843162	chunk0187_252_1	12.62075	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr7	153842994	153843299	-5502674	+	(CACA)n	Simple_repeat	Simple_repeat	1	305	0	3
chr7	153939351	153939352	chunk0187_253_1	21.70172	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	153939341	153939471	-5406502	-	L2c	LINE	L2	-6	3381	3249	3
chr7	154575011	154575012	chunk0187_255_1	5.82105	AR_DHT_Control	chr7	154574180	154575831	-4770142	+	(TG)n	Simple_repeat	Simple_repeat	1	1750	0	3
chr7	154603949	154603950	chunk0187_256_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	154603743	154604043	-4741930	+	L1ME3A	LINE	L1	5856	6166	-7	3
chr7	154837340	154837341	chunk0187_257_1	6.24192	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	154837093	154837457	-4508516	+	(CACA)n	Simple_repeat	Simple_repeat	1	367	0	3
chr7	154848156	154848157	chunk0187_258_1	63.6486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	154847527	154850043	-4495930	-	L1MA7	LINE	L1	0	6291	3782	3
chr7	155200047	155200048	chunk0187_268_1	23.3072	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	155199982	155200098	-4145875	-	MER134	DNA?	DNA?	-390	123	9	3
chr7	155670553	155670554	chunk0187_285_1	18.15901	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	155670523	155670709	-3675264	+	MIR	SINE	MIR	34	230	-32	3
chr7	155756504	155756505	chunk0187_290_1	31.4715	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	155756396	155757040	-3588933	-	Merlin1_HS	DNA	Merlin	-14	1161	482	3
chr7	155799311	155799312	chunk0187_292_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	155799158	155799480	-3546493	-	MER58B	DNA	hAT-Charlie	-3	338	1	3
chr7	156237777	156237778	chunk0187_302_1	7.74912	AR_DHT_Control	chr7	156237371	156238187	-3107786	+	(TG)n	Simple_repeat	Simple_repeat	1	872	0	3
chr7	156258307	156258308	chunk0187_303_1	4.63316	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	156257973	156258383	-3087590	+	MLT1J	LTR	ERVL-MaLR	43	441	-71	3
chr7	156299868	156299869	chunk0187_304_1	12.6499	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	156299478	156300056	-3045917	+	L1ME1	LINE	L1	2553	3132	-3187	3
chr7	156310346	156310347	chunk0187_306_1	13.35211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	156309853	156312909	-3033064	-	L1MA9	LINE	L1	0	7014	3914	3
chr7	156451753	156451754	chunk0187_310_1	10.1809	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	156451081	156452080	-2893893	-	L1M5	LINE	L1	-1433	4713	3680	3
chr7	156480995	156480996	chunk0187_314_1	14.0944	AR_DHT_Control	chr7	156480940	156481150	-2864823	-	LTR78	LTR	ERV1	-15	1289	1071	3
chr7	156596735	156596736	chunk0187_317_1	16.3135	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	156596719	156596912	-2749061	+	L1MD3	LINE	L1	7790	7995	0	3
chr7	156693849	156693850	chunk0187_328_1	11.85749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	156693241	156694165	-2651808	+	L1M3	LINE	L1	3068	3993	-2147	3
chr7	156695250	156695251	chunk0187_329_1	8.7059	AR_DHT_Control	chr7	156695030	156695321	-2650652	+	AluJr4	SINE	Alu	4	295	-17	3
chr7	156738496	156738497	chunk0187_333_1	9.70003	AR_DHT_Control	chr7	156737906	156743076	-2602897	+	L1M1	LINE	L1	14	5389	-2176	3
chr7	156753722	156753723	chunk0187_336_1	6.22495	AR_DHT_Control	chr7	156751122	156753884	-2592089	-	L2a	LINE	L2	-82	3344	23	3
chr7	156820785	156820786	chunk0187_338_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	156819635	156821920	-2524053	+	ERVL-B4-int	LTR	ERVL	1894	4224	-1490	3
chr7	156852798	156852799	chunk0187_339_1	10.5201	AR_DHT_Control	chr7	156852640	156852852	-2493121	+	MER20	DNA	hAT-Charlie	4	219	0	3
chr7	157482232	157482233	chunk0187_369_1	7.64898	AR_DHT_Control	chr7	157481306	157482858	-1863115	+	(GGTGTGT)n	Simple_repeat	Simple_repeat	1	1618	0	3
chr7	158021163	158021164	chunk0187_407_1	7.7606	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	158021038	158021198	-1324775	-	Plat_L3	LINE	CR1	-313	3273	3111	3
chr7	158377914	158377915	chunk0187_418_1	7.17788	AR_DHT_Control	chr7	158377860	158377922	-968051	+	(CACAG)n	Simple_repeat	Simple_repeat	1	65	0	3
chr7	158595249	158595250	chunk0187_422_1	112.6888	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	158595097	158595342	-750631	+	(GGTGGT)n	Simple_repeat	Simple_repeat	4	246	0	3
chr7	158601841	158601842	chunk0187_424_1	12.2363	AR_DHT_Control	chr7	158601770	158601953	-744020	-	MIR	SINE	MIR	-29	233	21	3
chr7	158658694	158658695	chunk0187_427_1	5.50529	SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	158658634	158658731	-687242	-	L2a	LINE	L2	-14	3412	3316	3
chr7	158895109	158895110	chunk0187_437_1	23.7241	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr7	158894427	158896458	-449515	-	L1MC1	LINE	L1	-410	6098	3960	3
chr7	158988235	158988236	chunk0187_442_1	5.9328	SRA057177_Lncap_AR_DHT_10nm_4hr	chr7	158986823	158988947	-357026	+	(TCCA)n	Simple_repeat	Simple_repeat	1	2143	0	3
chr7	159133825	159133826	chunk0187_448_1	20.76197	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr7	159133402	159133865	-212108	+	MER34B-int	LTR	ERV1	1184	1672	-3684	3
chr7	159189889	159189890	chunk0187_452_1	6.49378	AR_DHT_Control	chr7	159189862	159190181	-155792	+	L1ME3	LINE	L1	5509	5737	-1828	3
chr7	159219011	159219012	chunk0187_454_1	18.8686	AR_DHT_Control	chr7	159218402	159219360	-126613	+	L1M4	LINE	L1	364	1375	-6142	3
chr7	159305015	159305016	chunk0187_456_1	10.1791	AR_DHT_Control	chr7	159304802	159305368	-40605	+	L1ME3E	LINE	L1	5522	6097	-145	3
chr8	555798	555799	chunk0187_10_1	22.965	AR_DHT_Control	chr8	555341	555821	-144582815	-	MER31A	LTR	ERV1	-1	484	9	3
chr8	599872	599873	chunk0187_16_1	20.26565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	599771	599882	-144538754	+	L2c	LINE	L2	3270	3386	-1	3
chr8	624394	624395	chunk0187_18_1	6.33484	AR_DHT_Control	chr8	623657	624480	-144514156	+	L1MB7	LINE	L1	5763	6566	-478	3
chr8	815297	815298	chunk0187_30_1	17.4573	AR_DHT_Control	chr8	815097	815388	-144323248	-	MLT1A1	LTR	ERVL-MaLR	0	408	98	3
chr8	1368302	1368303	chunk0187_41_1	4.96282	AR_DHT_Control	chr8	1368107	1368434	-143770202	+	(TGTA)n	Simple_repeat	Simple_repeat	1	337	0	3
chr8	1662892	1662893	chunk0187_47_1	8.3168	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	1662775	1663240	-143475396	+	(GT)n	Simple_repeat	Simple_repeat	1	474	0	3
chr8	1773065	1773066	chunk0187_52_1	9.68961	AR_DHT_Control	chr8	1773042	1773115	-143365521	-	L2b	LINE	L2	-1	3374	3295	3
chr8	1920825	1920826	chunk0187_57_1	6.79799	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	1920776	1921085	-143217551	-	AluSp	SINE	Alu	-3	310	1	3
chr8	2007563	2007564	chunk0187_65_1	59.1901	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	2007231	2007592	-143131044	-	MER74B	LTR	ERVL	-173	449	58	3
chr8	2029480	2029481	chunk0187_67_1	4.93365	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	2029256	2029885	-143108751	+	(TGTA)n	Simple_repeat	Simple_repeat	1	640	0	3
chr8	2148697	2148698	chunk0187_72_1	54.27627	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	2148552	2148903	-142989733	-	L1MC4	LINE	L1	-144	7898	7539	3
chr8	2738715	2738716	chunk0187_75_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	2736597	2738886	-142399750	+	L1M4	LINE	L1	197	2673	-3971	3
chr8	3073261	3073262	chunk0187_82_1	31.7136	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	3072986	3073343	-142065293	+	L1M2	LINE	L1	4532	4899	-1247	3
chr8	3523754	3523755	chunk0187_87_1	16.66666	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	3523736	3523780	-141614856	+	(ACACATGCAC)n	Simple_repeat	Simple_repeat	1	44	0	3
chr8	4317188	4317189	chunk0187_95_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	4317140	4317238	-140821398	-	MIRc	SINE	MIR	-3	265	163	3
chr8	5346817	5346818	chunk0187_106_1	77.8042	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	5346804	5346824	-139791812	+	A-rich	Low_complexity	Low_complexity	1	19	0	3
chr8	5991211	5991212	chunk0187_110_1	21.0778	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	5990821	5991919	-139146717	+	L1ME2	LINE	L1	1736	2875	-3271	3
chr8	6335031	6335032	chunk0188_10_1	35.3892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	6334991	6335395	-138803241	+	L1M7	LINE	L1	1539	1967	-4251	3
chr8	6339101	6339102	chunk0188_12_1	67.34273	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	6339058	6339503	-138799133	+	MER61C	LTR	ERV1	1	427	-1	3
chr8	6460056	6460057	chunk0188_17_1	8.22827	AR_DHT_Control	chr8	6460005	6460384	-138678252	-	L1MEg	LINE	L1	-4877	1207	781	3
chr8	6519285	6519286	chunk0188_20_1	5.52722	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	6519182	6519486	-138619150	+	Charlie1a	DNA	hAT-Charlie	1	319	-1136	3
chr8	6526617	6526618	chunk0188_21_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	6526458	6526967	-138611669	+	Charlie9	DNA	hAT-Charlie	2024	2600	-157	3
chr8	6583298	6583299	chunk0188_33_1	89.0694	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	6583246	6583306	-138555330	-	L1PA8A	LINE	L1	-3	6128	6070	3
chr8	6633351	6633352	chunk0188_39_1	51.8855	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	6632984	6633412	-138505224	+	L1M5	LINE	L1	3914	4377	-1769	3
chr8	6642759	6642760	chunk0188_41_1	19.5528	AR_DHT_Control	chr8	6642748	6642838	-138495798	+	Charlie5	DNA	hAT-Charlie	31	123	-2501	3
chr8	6651520	6651521	chunk0188_42_1	29.4682	AR_DHT_Control	chr8	6651329	6651614	-138487022	+	MER41C	LTR	ERV1	1	266	-255	3
chr8	6735739	6735740	chunk0188_47_1	34.9289	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	6735377	6735746	-138402890	-	L1MCa	LINE	L1	-6008	415	24	3
chr8	6817617	6817618	chunk0188_49_1	49.17097	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	6817464	6818164	-138320472	+	MER67B	LTR	ERV1	2	660	-1	3
chr8	6850921	6850922	chunk0188_51_1	5.30168	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	6850729	6851820	-138286816	+	(CACACA)n	Simple_repeat	Simple_repeat	1	1102	0	3
chr8	6852431	6852432	chunk0188_53_1	28.9086	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	6852052	6852598	-138286038	+	MER115	DNA	hAT-Tip100	116	693	0	3
chr8	7027459	7027460	chunk0188_58_1	155.2029	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	7027440	7027537	-138111099	-	MER51E	LTR	ERV1	-385	97	1	3
chr8	7032594	7032595	chunk0188_59_1	10.7282	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	7032585	7032905	-138105731	+	L1MB8	LINE	L1	6719	7038	0	3
chr8	8362262	8362263	chunk0188_69_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	8359470	8362615	-136776021	-	HERVI-int	LTR	ERV1	-4692	3093	1	3
chr8	8408406	8408407	chunk0188_79_1	28.13289	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	8408350	8408434	-136730202	+	MIR	SINE	MIR	175	261	-1	3
chr8	8800433	8800434	chunk0188_94_1	29.77432	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	8800413	8800545	-136338091	-	MIR3	SINE	MIR	-13	195	50	3
chr8	9023623	9023624	chunk0188_109_1	36.472	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	9023413	9023793	-136114843	-	Charlie6	DNA	hAT-Charlie	-30	3470	3049	3
chr8	9057652	9057653	chunk0188_113_1	54.27784	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	9057546	9058294	-136080342	-	L2a	LINE	L2	0	3426	2567	3
chr8	9059715	9059716	chunk0188_114_1	12.7755	AR_DHT_Control	chr8	9059688	9059904	-136078732	-	HERVH-int	LTR	ERV1	-1894	5819	5600	3
chr8	9128974	9128975	chunk0188_123_1	51.599	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	9128793	9129571	-136009065	+	L1MD1	LINE	L1	4697	5491	-868	3
chr8	9188269	9188270	chunk0188_127_1	13.5394	AR_DHT_Control	chr8	9188163	9188460	-135950176	-	L2b	LINE	L2	0	3375	3069	3
chr8	9208319	9208320	chunk0188_130_1	43.29303	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	9208242	9208581	-135930055	+	MamRTE1	LINE	RTE-BovB	3083	3431	-381	3
chr8	9354401	9354402	chunk0188_132_1	32.0406	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	9354203	9354406	-135784230	-	MER58A	DNA	hAT-Charlie	0	224	12	3
chr8	10030928	10030929	chunk0188_148_1	24.9429	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	10030625	10030968	-135107668	-	L1ME1	LINE	L1	-117	6062	5695	3
chr8	10351855	10351856	chunk0188_150_1	15.29178	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	10351746	10351868	-134786768	-	MER5A1	DNA	hAT-Charlie	0	166	41	3
chr8	10466455	10466456	chunk0188_153_1	56.21432	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	10466346	10466789	-134671847	-	L1ME3B	LINE	L1	-597	5645	5192	3
chr8	10789378	10789379	chunk0188_169_1	4.15945	AR_DHT_Control	chr8	10789276	10789538	-134349098	-	L1MA9	LINE	L1	0	6312	6044	3
chr8	11134329	11134330	chunk0188_172_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	11133845	11134342	-134004294	+	L2c	LINE	L2	2817	3329	-58	3
chr8	11148771	11148772	chunk0188_173_1	9.07871	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11148537	11149058	-133989578	+	L1ME1	LINE	L1	5507	6040	-139	3
chr8	11469046	11469047	chunk0188_183_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11469009	11469324	-133669312	+	L1ME4a	LINE	L1	5763	6118	-6	3
chr8	11489821	11489822	chunk0188_185_1	75.3266	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11488705	11490454	-133648182	-	L1M4a1	LINE	L1	-209	2370	607	3
chr8	11573775	11573776	chunk0188_187_1	192.715	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	11573642	11574304	-133564332	+	L1ME3G	LINE	L1	47	561	-363	3
chr8	11738571	11738572	chunk0188_190_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11738209	11738798	-133399838	-	L1ME4b	LINE	L1	-15	877	245	3
chr8	11748375	11748376	chunk0188_191_1	15.09677	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	11748245	11748409	-133390227	+	FRAM	SINE	Alu	1	166	-10	3
chr8	11751058	11751059	chunk0188_193_1	8.52761	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11750985	11751228	-133387408	+	L1M5	LINE	L1	5018	5285	-861	3
chr8	11800664	11800665	chunk0188_195_1	7.64898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11800290	11800839	-133337797	-	LTR10C	LTR	ERV1	-49	542	1	3
chr8	11864071	11864072	chunk0188_201_1	19.67086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	11863716	11864150	-133274486	+	L1ME3Cz	LINE	L1	166	684	-313	3
chr8	12126605	12126606	chunk0188_203_1	274.8176	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	12125835	12127166	-133011470	-	L1PA10	LINE	L1	-1111	5035	3693	3
chr8	12705061	12705062	chunk0188_207_1	7.36432	AR_DHT_Control	chr8	12704891	12708036	-132430600	+	SATR2	Satellite	Satellite	1	2071	0	3
chr8	12721163	12721164	chunk0188_208_1	6.5005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	12719886	12721430	-132417206	+	MER52A	LTR	ERV1	217	1747	-8	3
chr8	12735669	12735670	chunk0188_209_1	10.1061	AR_DHT_Control	chr8	12735631	12735785	-132402851	+	MER33	DNA	hAT-Charlie	1	155	-169	3
chr8	12778379	12778380	chunk0188_217_1	16.83173	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	12778306	12778529	-132360107	+	L1ME4a	LINE	L1	5670	5913	-211	3
chr8	12780912	12780913	chunk0188_219_1	14.5778	AR_DHT_Control	chr8	12780664	12782641	-132355995	-	L1MA5	LINE	L1	-805	6757	4781	3
chr8	12865931	12865932	chunk0188_228_1	20.57706	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	12865847	12865991	-132272645	+	L1MEd	LINE	L1	281	430	-6673	3
chr8	12901858	12901859	chunk0188_230_1	12.0277	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	12901532	12901895	-132236741	-	MER65B	LTR	ERV1	-15	516	185	3
chr8	13061480	13061481	chunk0188_231_1	12.9759	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	13061464	13062094	-132076542	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	3
chr8	13187081	13187082	chunk0188_232_1	18.21884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	13185606	13187083	-131951553	-	L1PA6	LINE	L1	-3978	2206	731	3
chr8	13637527	13637528	chunk0188_242_1	80.1723	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	13637175	13637599	-131501037	-	MLT2B1	LTR	ERVL	-3	517	4	3
chr8	13784744	13784745	chunk0188_243_1	7.36432	AR_DHT_Control	chr8	13784167	13784987	-131353649	-	L1PA17	LINE	L1	-24	6142	5285	3
chr8	13913441	13913442	chunk0188_245_1	60.625	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	13913346	13913721	-131224915	+	L1MC1	LINE	L1	5586	5932	-401	3
chr8	14394953	14394954	chunk0188_249_1	7.53305	AR_DHT_Control	chr8	14394880	14395133	-130743503	+	MIR	SINE	MIR	6	268	0	3
chr8	14400000	14400001	chunk0188_250_1	8.95381	AR_DHT_Control	chr8	14399821	14400372	-130738264	-	L1MB8	LINE	L1	-1	6177	5643	3
chr8	14478231	14478232	chunk0188_254_1	17.50479	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	14478039	14478610	-130660026	+	L1MC1	LINE	L1	5485	6071	-262	3
chr8	14521542	14521543	chunk0188_255_1	6.48643	AR_DHT_Control	chr8	14521479	14521786	-130616850	-	L1MD1	LINE	L1	-411	6222	5911	3
chr8	14762847	14762848	chunk0188_259_1	22.04691	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	14762847	14763011	-130375625	+	MIRb	SINE	MIR	3	173	-95	3
chr8	14770742	14770743	chunk0188_261_1	9.90105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	14770652	14770991	-130367645	-	L2c	LINE	L2	0	3387	3036	3
chr8	14817331	14817332	chunk0188_266_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	14817212	14817635	-130321001	+	L1MA6	LINE	L1	955	1412	-6154	3
chr8	15276405	15276406	chunk0188_273_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15273908	15277589	-129861047	+	L1MC1	LINE	L1	2854	6492	-16	3
chr8	15422367	15422368	chunk0188_274_1	10.6593	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15422272	15422409	-129716227	-	L1M5	LINE	L1	-1308	4838	4698	3
chr8	15493952	15493953	chunk0188_276_1	101.2684	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	15493905	15494161	-129644475	-	MamRTE1	LINE	RTE-BovB	-73	3739	3482	3
chr8	15494790	15494791	chunk0188_277_1	15.69461	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15494616	15494935	-129643701	-	ERV3-16A3_I-int	LTR	ERVL	-2183	2813	2331	3
chr8	15518050	15518051	chunk0188_279_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15517851	15518177	-129620459	-	L1MB7	LINE	L1	-24	6160	5850	3
chr8	15567516	15567517	chunk0188_284_1	6.40219	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15567495	15567827	-129570809	-	Tigger18a	DNA	TcMar-Tigger	-464	388	1	3
chr8	15598807	15598808	chunk0188_286_1	33.5956	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	15598301	15599921	-129538715	-	L1MC1	LINE	L1	-11	6322	4644	3
chr8	15618576	15618577	chunk0188_287_1	10.45837	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	15617876	15618969	-129519667	-	Tigger3b	DNA	TcMar-Tigger	-79	1152	1	3
chr8	15656990	15656991	chunk0188_290_1	6.26854	AR_DHT_Control	chr8	15656150	15657785	-129480851	-	MLT1A1-int	LTR	ERVL-MaLR	0	1735	2	3
chr8	15684277	15684278	chunk0188_293_1	33.41802	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	15678657	15685481	-129453155	-	L1PA17	LINE	L1	-20	6915	3	3
chr8	15702575	15702576	chunk0188_295_1	85.94914	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	15702199	15702756	-129435880	-	L3	LINE	CR1	-7	4092	3517	3
chr8	15842343	15842344	chunk0188_298_1	20.7578	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	15842209	15842425	-129296211	+	MIRb	SINE	MIR	26	240	-28	3
chr8	16162923	16162924	chunk0188_301_1	14.8157	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	16162894	16163279	-128975357	+	L1MEd	LINE	L1	1740	2109	-4994	3
chr8	16490080	16490081	chunk0188_305_1	18.65607	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	16489951	16490623	-128648013	+	L2a	LINE	L2	2423	3115	-311	3
chr8	17064718	17064719	chunk0188_309_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	17064693	17064916	-128073720	-	Charlie1a	DNA	hAT-Charlie	-264	1191	962	3
chr8	17255795	17255796	chunk0188_315_1	5.18121	AR_DHT_Control	chr8	17255631	17256290	-127882346	-	L1MA4	LINE	L1	-218	7501	6864	3
chr8	17256606	17256607	chunk0188_316_1	4.81216	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	17256430	17256630	-127882006	-	L1MA4	LINE	L1	-780	6782	6581	3
chr8	17515965	17515966	chunk0188_324_1	45.448	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	17515760	17516087	-127622549	-	L3	LINE	CR1	-5	4094	3733	3
chr8	17528053	17528054	chunk0188_325_1	6.3126	AR_DHT_Control	chr8	17527888	17528222	-127610414	-	L2c	LINE	L2	-110	3277	2875	3
chr8	17801528	17801529	chunk0188_344_1	6.33125	AR_DHT_Control	chr8	17801485	17801543	-127337093	+	(CGCTCC)n	Simple_repeat	Simple_repeat	1	59	0	3
chr8	17904405	17904406	chunk0188_351_1	39.57229	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	17904329	17904562	-127234074	-	MIR	SINE	MIR	-9	253	6	3
chr8	17977704	17977705	chunk0188_356_1	6.6351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	17977664	17978746	-127159890	+	L1MEj	LINE	L1	284	1454	-706	3
chr8	18073683	18073684	chunk0188_360_1	98.8674	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	18073585	18073806	-127064830	+	7SK	RNA	RNA	7	251	-80	3
chr8	18209389	18209390	chunk0188_371_1	116.639	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	18209329	18209476	-126929160	+	L1MA6	LINE	L1	6149	6300	0	3
chr8	18260843	18260844	chunk0188_377_1	6.0927	AR_DHT_Control	chr8	18260757	18261327	-126877309	+	LTR48B	LTR	ERV1	1	644	0	3
chr8	18314659	18314660	chunk0188_378_1	8.71584	AR_DHT_Control	chr8	18314633	18314690	-126823946	+	(AC)n	Simple_repeat	Simple_repeat	1	58	0	3
chr8	18317308	18317309	chunk0188_379_1	7.70585	AR_DHT_Control	chr8	18317239	18317602	-126821034	+	L2a	LINE	L2	3035	3416	-10	3
chr8	18399146	18399147	chunk0188_381_1	12.811	AR_DHT_Control	chr8	18398911	18399437	-126739199	+	L2a	LINE	L2	2769	3329	-97	3
chr8	18409377	18409378	chunk0188_382_1	6.68224	AR_DHT_Control	chr8	18409262	18409815	-126728821	-	LTR19B	LTR	ERV1	0	580	1	3
chr8	18412179	18412180	chunk0188_384_1	20.82165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	18409815	18412854	-126725782	+	L1PA17	LINE	L1	3272	6152	-717	3
chr8	18445329	18445330	chunk0188_385_1	10.2986	AR_DHT_Control	chr8	18444851	18445983	-126692653	+	L1MC1	LINE	L1	5187	6306	-27	3
chr8	18563281	18563282	chunk0188_390_1	20.27124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	18563225	18563344	-126575292	+	L2b	LINE	L2	3261	3375	0	3
chr8	18637126	18637127	chunk0188_393_1	19.89763	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	18636906	18637707	-126500929	-	L1MC4a	LINE	L1	-1204	6678	5726	3
chr8	18666468	18666469	chunk0188_398_1	159.179	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	18666349	18666472	-126472164	+	Tigger1	DNA	TcMar-Tigger	2308	2418	0	3
chr8	18738324	18738325	chunk0188_402_1	6.89429	AR_DHT_Control	chr8	18738268	18738414	-126400222	+	MIR3	SINE	MIR	58	198	-10	3
chr8	18753777	18753778	chunk0188_404_1	54.6572	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	18753656	18753884	-126384752	-	Tigger15a	DNA	TcMar-Tigger	-26	689	438	3
chr8	18774513	18774514	chunk0188_406_1	120.1894	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	18774244	18774521	-126364115	-	L1MA4	LINE	L1	-13	6287	6005	3
chr8	18852607	18852608	chunk0188_408_1	5.09613	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	18852560	18852661	-126285975	-	MamSINE1	SINE	tRNA-RTE	-63	227	126	3
chr8	18899782	18899783	chunk0188_414_1	106.20618	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	18898483	18900642	-126237994	-	Tigger2	DNA	TcMar-Tigger	0	2718	533	3
chr8	18922791	18922792	chunk0188_416_1	88.2138	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	18922459	18923094	-126215542	-	MER21B	LTR	ERVL	-18	850	179	3
chr8	19027937	19027938	chunk0188_428_1	88.41787	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	19027425	19028265	-126110371	-	L1ME1	LINE	L1	-3	6176	5325	3
chr8	19122313	19122314	chunk0188_433_1	161.3685	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	19122297	19122970	-126015666	-	L1MC2	LINE	L1	-11	6333	5689	3
chr8	19179973	19179974	chunk0188_437_1	45.6156	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	19179327	19181074	-125957562	-	Arthur1	DNA	hAT-Tip100	-1276	2671	822	3
chr8	19306934	19306935	chunk0188_443_1	3.75317	AR_DHT_Control	chr8	19306759	19307017	-125831619	+	MIRc	SINE	MIR	2	268	0	3
chr8	19323944	19323945	chunk0188_447_1	7.68272	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	19323765	19323987	-125814649	-	MIRb	SINE	MIR	-8	260	29	3
chr8	19438713	19438714	chunk0189_5_1	36.1368	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	19438567	19438791	-125699845	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr8	19457011	19457012	chunk0189_7_1	9.55513	AR_DHT_Control	chr8	19456810	19457182	-125681454	+	L3	LINE	CR1	3688	4097	-2	3
chr8	19482225	19482226	chunk0189_9_1	7.03714	AR_DHT_Control	chr8	19482162	19482347	-125656289	+	MER3	DNA	hAT-Charlie	1	207	-2	3
chr8	19495290	19495291	chunk0189_12_1	4.01478	AR_DHT_Control	chr8	19495285	19495448	-125643188	-	Tigger16b	DNA	TcMar-Tigger	-1	335	153	3
chr8	19627937	19627938	chunk0189_22_1	52.7236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	19627840	19628040	-125510596	+	L1MD2	LINE	L1	6165	6340	-19	3
chr8	19678575	19678576	chunk0189_24_1	17.9812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	19678447	19678659	-125459977	+	L3	LINE	CR1	153	368	-3731	3
chr8	19682256	19682257	chunk0189_25_1	7.23138	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	19682024	19682271	-125456365	+	MER115	DNA	hAT-Tip100	446	693	0	3
chr8	19802331	19802332	chunk0189_39_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	19801893	19802772	-125335864	+	LTR28B	LTR	ERV1	1	974	0	3
chr8	19887987	19887988	chunk0189_40_1	64.8208	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	19887965	19888093	-125250543	-	L2c	LINE	L2	-4	3383	3256	3
chr8	19987384	19987385	chunk0189_47_1	9.22937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	19987068	19987621	-125151015	+	MER63C	DNA	hAT-Blackjack	83	675	-255	3
chr8	20004981	20004982	chunk0189_48_1	16.6117	AR_DHT_Control	chr8	20003991	20005004	-125133632	-	MER52A	LTR	ERV1	-585	1538	1	3
chr8	20010736	20010737	chunk0189_49_1	15.79199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	20010673	20010913	-125127723	+	L1PREC2	LINE	L1	5081	5303	-843	3
chr8	20045097	20045098	chunk0189_54_1	7.42871	AR_DHT_Control	chr8	20045001	20045513	-125093123	+	L1ME1	LINE	L1	4730	5287	-859	3
chr8	20104473	20104474	chunk0189_59_1	19.67284	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	20104358	20104991	-125033645	+	LTR41	LTR	ERVL	1	768	0	3
chr8	20219482	20219483	chunk0189_63_1	5.99997	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	20219479	20219592	-124919044	+	L1ME3A	LINE	L1	6034	6148	-25	3
chr8	20418571	20418572	chunk0189_65_1	22.251	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	20418560	20418612	-124720024	+	L2a	LINE	L2	3332	3422	-4	3
chr8	20630468	20630469	chunk0189_67_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	20630413	20630556	-124508080	-	MER112	DNA	hAT-Charlie	-99	162	6	3
chr8	20789289	20789290	chunk0189_68_1	8.46929	AR_DHT_Control	chr8	20789018	20789499	-124349137	-	MLT1H	LTR	ERVL-MaLR	0	549	7	3
chr8	20802460	20802461	chunk0189_70_1	15.97186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	20802453	20802626	-124336010	+	MER124	DNA?	DNA?	145	344	-53	3
chr8	20939155	20939156	chunk0189_74_1	16.25382	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	20939068	20939169	-124199467	+	L2a	LINE	L2	3312	3421	-5	3
chr8	20948484	20948485	chunk0189_76_1	32.10016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	20948186	20948570	-124190066	+	L1PA10	LINE	L1	5777	6156	-12	3
chr8	20968368	20968369	chunk0189_77_1	15.49237	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	20968357	20968416	-124170220	-	L2b	LINE	L2	-9	3366	3308	3
chr8	21123419	21123420	chunk0189_80_1	7.27655	AR_DHT_Control	chr8	21123087	21124185	-124014451	-	L1ME1	LINE	L1	-150	6029	4956	3
chr8	21249739	21249740	chunk0189_82_1	4.85178	AR_DHT_Control	chr8	21249633	21249813	-123888823	+	MIRc	SINE	MIR	60	254	-14	3
chr8	21291390	21291391	chunk0189_88_1	7.19831	AR_DHT_Control	chr8	21291272	21291828	-123846808	+	Tigger3b	DNA	TcMar-Tigger	1	568	-663	3
chr8	21359272	21359273	chunk0189_89_1	20.3624	AR_DHT_Control	chr8	21359121	21359330	-123779306	-	MLT2B4	LTR	ERVL	-344	212	1	3
chr8	21458283	21458284	chunk0189_92_1	11.708	AR_DHT_Control	chr8	21458235	21458510	-123680126	-	Tigger3a	DNA	TcMar-Tigger	0	348	29	3
chr8	21713111	21713112	chunk0189_94_1	13.9612	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	21713104	21713177	-123425459	-	MER53	DNA	hAT	-117	76	3	3
chr8	21953587	21953588	chunk0189_103_1	36.4708	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	21952925	21953966	-123184670	-	L1MC2	LINE	L1	-11	6333	5186	3
chr8	22442925	22442926	chunk0189_130_1	20.85735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	22442740	22442936	-122695700	-	Tigger15a	DNA	TcMar-Tigger	-161	554	348	3
chr8	22523527	22523528	chunk0189_136_1	20.40685	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	22523464	22523915	-122614721	-	MARNA	DNA	TcMar-Mariner	-7	579	126	3
chr8	22840790	22840791	chunk0189_140_1	204.6988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	22840743	22840877	-122297759	+	L2b	LINE	L2	3238	3374	-1	3
chr8	22915535	22915536	chunk0189_144_1	54.39499	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	22915407	22915615	-122223021	+	L2b	LINE	L2	3144	3371	-4	3
chr8	23033893	23033894	chunk0189_154_1	3.9646	AR_DHT_Control	chr8	23033671	23034009	-122104627	-	MLT1A	LTR	ERVL-MaLR	-9	365	1	3
chr8	23070680	23070681	chunk0189_156_1	7.91029	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	23069936	23071352	-122067284	-	LTR12C	LTR	ERV1	0	1579	3	3
chr8	23218833	23218834	chunk0189_161_1	14.2024	AR_DHT_Control	chr8	23218802	23218930	-121919706	+	MIR	SINE	MIR	112	241	-21	3
chr8	23392405	23392406	chunk0189_166_1	8.27376	AR_DHT_Control	chr8	23392325	23392558	-121746078	+	MamGypsy2-I	LTR	Gypsy	2383	2620	-1546	3
chr8	23410285	23410286	chunk0189_167_1	5.08049	AR_DHT_Control	chr8	23410022	23410293	-121728343	+	Tigger3b	DNA	TcMar-Tigger	943	1220	-11	3
chr8	23421602	23421603	chunk0189_169_1	77.0912	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	23421139	23422116	-121716520	+	HERVK3-int	LTR	ERVK	6223	7202	0	3
chr8	23525868	23525869	chunk0189_174_1	6.00025	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	23525764	23526229	-121612407	-	LTR67B	LTR	ERVL	-148	472	1	3
chr8	23530178	23530179	chunk0189_175_1	23.96093	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	23530145	23530250	-121608386	-	MIRb	SINE	MIR	-58	210	89	3
chr8	23552342	23552343	chunk0189_177_1	5.48709	AR_DHT_Control	chr8	23552251	23552415	-121586221	-	MIRb	SINE	MIR	-14	254	58	3
chr8	23591295	23591296	chunk0189_183_1	11.1109	AR_DHT_Control	chr8	23591237	23591408	-121547228	-	MIRc	SINE	MIR	-2	266	90	3
chr8	23626403	23626404	chunk0189_190_1	38.06504	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	23626220	23626435	-121512201	+	L1ME4b	LINE	L1	483	671	-221	3
chr8	23645061	23645062	chunk0189_195_1	14.8664	AR_DHT_Control	chr8	23644891	23645063	-121493573	+	MIRb	SINE	MIR	106	262	0	3
chr8	23809189	23809190	chunk0189_202_1	39.2369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	23808229	23809425	-121329211	-	L1MC3	LINE	L1	-1061	6724	5526	3
chr8	24101526	24101527	chunk0189_204_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	24101307	24101543	-121037093	+	MIR	SINE	MIR	13	261	-1	3
chr8	24157574	24157575	chunk0189_206_1	8.68049	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	24157504	24158012	-120980624	+	L4_A_Mam	LINE	RTE-X	2567	3093	-1897	3
chr8	24244351	24244352	chunk0189_210_1	8.84892	AR_DHT_Control	chr8	24244239	24244470	-120894166	+	MIRb	SINE	MIR	22	260	-8	3
chr8	24303004	24303005	chunk0189_211_1	137.5697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	24302989	24303869	-120834767	-	L1PA10	LINE	L1	-825	5321	4426	3
chr8	24337497	24337498	chunk0189_214_1	130.0403	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	24337430	24337578	-120801058	+	L2b	LINE	L2	3225	3370	-5	3
chr8	24355082	24355083	chunk0189_219_1	67.7931	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	24355049	24355280	-120783356	+	Charlie8	DNA	hAT-Charlie	4	199	-2229	3
chr8	24386468	24386469	chunk0189_222_1	11.4186	AR_DHT_Control	chr8	24386375	24386477	-120752159	+	L5	LINE	RTE-X	1810	1912	-353	3
chr8	24436756	24436757	chunk0189_226_1	64.82625	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	24436746	24438273	-120700363	-	L2a	LINE	L2	-35	3391	1766	3
chr8	24443277	24443278	chunk0189_229_1	16.2143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	24443211	24443364	-120695272	-	LTR78	LTR	ERV1	-783	521	361	3
chr8	24458097	24458098	chunk0189_231_1	120.1376	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	24457891	24459446	-120679190	-	L1ME2z	LINE	L1	-1173	4973	3200	3
chr8	24473218	24473219	chunk0189_233_1	29.4198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	24472037	24473248	-120665388	+	L1MEd	LINE	L1	2406	3656	-2490	3
chr8	24547108	24547109	chunk0189_236_1	8.58634	AR_DHT_Control	chr8	24546900	24547141	-120591495	-	L2c	LINE	L2	-942	2477	2227	3
chr8	24568067	24568068	chunk0189_237_1	8.2993	AR_DHT_Control	chr8	24567695	24568080	-120570556	-	L1MEg	LINE	L1	-5646	589	198	3
chr8	24928809	24928810	chunk0189_245_1	21.74287	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	24928783	24929140	-120209496	+	MER41D	LTR	ERV1	194	557	0	3
chr8	25074522	25074523	chunk0189_250_1	5.25527	AR_DHT_Control	chr8	25074512	25074601	-120064035	+	MIRb	SINE	MIR	98	200	-68	3
chr8	25174671	25174672	chunk0189_254_1	13.8795	AR_DHT_Control	chr8	25174561	25174802	-119963834	-	L1MC	LINE	L1	-2527	3619	3371	3
chr8	25220639	25220640	chunk0189_257_1	9.21264	AR_DHT_Control	chr8	25220608	25220903	-119917733	-	AluSx1	SINE	Alu	-9	303	1	3
chr8	25250723	25250724	chunk0189_261_1	15.34697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	25250567	25250782	-119887854	-	L2a	LINE	L2	0	3426	3225	3
chr8	25253953	25253954	chunk0189_264_1	27.56593	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	25253734	25254497	-119884139	+	L1MC1	LINE	L1	4472	5239	-907	3
chr8	25320045	25320046	chunk0189_269_1	30.3937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	25320039	25320250	-119818386	-	MIRc	SINE	MIR	-33	235	21	3
chr8	25370493	25370494	chunk0189_277_1	16.42773	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	25370483	25370498	-119768138	+	(TTA)n	Simple_repeat	Simple_repeat	1	15	0	3
chr8	25478711	25478712	chunk0189_287_1	167.17228	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	25478225	25478869	-119659767	+	L2a	LINE	L2	2577	3245	-181	3
chr8	26000776	26000777	chunk0189_301_1	132.752	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	26000591	26000792	-119137844	+	MER124	DNA?	DNA?	174	379	-18	3
chr8	26038821	26038822	chunk0189_306_1	7.84013	AR_DHT_Control	chr8	26038756	26038826	-119099810	-	L3b	LINE	CR1	-858	4374	4299	3
chr8	26096406	26096407	chunk0189_309_1	49.8909	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	26096110	26096562	-119042074	+	MLT1G3	LTR	ERVL-MaLR	134	595	0	3
chr8	26337741	26337742	chunk0189_325_1	18.09257	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	26337679	26337823	-118800813	+	Charlie4z	DNA	hAT-Charlie	1	158	-9	3
chr8	26391847	26391848	chunk0189_332_1	7.8637	AR_DHT_Control	chr8	26391777	26391912	-118746724	+	L2c	LINE	L2	3241	3373	-14	3
chr8	26460452	26460453	chunk0189_338_1	182.37512	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	26460180	26460613	-118678023	+	L1ME1	LINE	L1	5334	5748	-431	3
chr8	26606984	26606985	chunk0189_340_1	11.3499	AR_DHT_Control	chr8	26606873	26607204	-118531432	+	L1ME4a	LINE	L1	5476	5826	-298	3
chr8	26811847	26811848	chunk0189_351_1	134.3415	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	26811695	26812042	-118326594	-	L1ME3	LINE	L1	-108	6054	5669	3
chr8	26852205	26852206	chunk0189_352_1	9.17597	AR_DHT_Control	chr8	26851967	26853105	-118285531	+	L1M6	LINE	L1	2973	4198	-2202	3
chr8	26944589	26944590	chunk0189_353_1	32.1628	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	26943639	26946181	-118192455	-	L1PB1	LINE	L1	0	6867	4303	3
chr8	26985238	26985239	chunk0189_359_1	36.85752	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	26985173	26985575	-118153061	+	HAL1b	LINE	L1	1297	1723	-698	3
chr8	26999753	26999754	chunk0189_360_1	23.1748	AR_DHT_Control	chr8	26999735	26999994	-118138642	-	L1ME1	LINE	L1	-3404	2742	2427	3
chr8	27001073	27001074	chunk0189_361_1	7.22247	AR_DHT_Control	chr8	27000000	27001144	-118137492	-	L1MEf	LINE	L1	-3727	2419	1202	3
chr8	27083488	27083489	chunk0189_363_1	14.78831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	27083400	27083792	-118054844	-	L2a	LINE	L2	-7	3419	3002	3
chr8	27282671	27282672	chunk0189_368_1	390.81098	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27282533	27282705	-117855931	+	L1ME4b	LINE	L1	702	886	-6	3
chr8	27316499	27316500	chunk0189_374_1	20.6847	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	27316331	27316547	-117822089	+	L1M5	LINE	L1	2166	2390	-3756	3
chr8	27385016	27385017	chunk0189_380_1	7.26348	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	27385001	27385227	-117753409	+	MIR	SINE	MIR	9	242	-20	3
chr8	27400151	27400152	chunk0189_383_1	28.4287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27400151	27400370	-117738266	+	MER103C	DNA	hAT-Charlie	35	245	-52	3
chr8	27414061	27414062	chunk0189_386_1	103.534	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27412999	27414247	-117724389	-	L1MC4	LINE	L1	0	8042	6749	3
chr8	27596100	27596101	chunk0189_404_1	224.6309	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	27596021	27596151	-117542485	+	MER91B	DNA	hAT-Tip100	1	140	-50	3
chr8	27617083	27617084	chunk0189_408_1	20.43741	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	27616721	27617316	-117521320	-	L3b	LINE	CR1	-74	4025	3529	3
chr8	27685942	27685943	chunk0189_410_1	9.19742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27685663	27686159	-117452477	+	L1MC5a	LINE	L1	2060	2496	-281	3
chr8	27740599	27740600	chunk0189_412_1	43.3411	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	27740558	27740706	-117397930	-	L2a	LINE	L2	-4	3422	3279	3
chr8	27885463	27885464	chunk0189_421_1	8.46929	AR_DHT_Control	chr8	27885302	27885478	-117253158	+	L2b	LINE	L2	3089	3287	-88	3
chr8	27969663	27969664	chunk0189_428_1	10.4948	AR_DHT_Control	chr8	27969323	27969844	-117168792	+	L1MC1	LINE	L1	5818	6332	-1	3
chr8	28029024	28029025	chunk0189_430_1	15.3857	AR_DHT_Control	chr8	28028876	28029057	-117109579	+	MIR	SINE	MIR	33	227	-35	3
chr8	28140789	28140790	chunk0189_434_1	7.97093	AR_DHT_Control	chr8	28140453	28141028	-116997608	+	Tigger17a	DNA	TcMar-Tigger	1	589	-65	3
chr8	28148255	28148256	chunk0189_437_1	133.384	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	28147423	28148516	-116990120	+	L1MC4	LINE	L1	6460	7518	-524	3
chr8	28176218	28176219	chunk0189_439_1	4.9245	AR_DHT_Control	chr8	28176116	28176694	-116961942	-	L1MB4	LINE	L1	-6552	965	291	3
chr8	28245316	28245317	chunk0189_443_1	24.8599	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	28245216	28245630	-116893006	+	MER51E	LTR	ERV1	1	482	0	3
chr8	28277887	28277888	chunk0189_445_1	8.82835	AR_DHT_Control	chr8	28277758	28278255	-116860381	+	L1MB3	LINE	L1	5684	6181	-2	3
chr8	28290338	28290339	chunk0189_447_1	76.5226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	28290315	28290634	-116848002	+	L1MD3	LINE	L1	7676	7995	0	3
chr8	28297193	28297194	chunk0189_448_1	12.4453	AR_DHT_Control	chr8	28297157	28297281	-116841355	-	MIR3	SINE	MIR	-50	158	36	3
chr8	28322877	28322878	chunk0189_449_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	28322771	28322960	-116815676	+	MIRb	SINE	MIR	24	237	-31	3
chr8	28473140	28473141	chunk0189_454_1	7.14391	AR_DHT_Control	chr8	28472760	28473248	-116665388	+	LTR50	LTR	ERVL	82	794	-1	3
chr8	28499430	28499431	chunk0189_455_1	9.28589	AR_DHT_Control	chr8	28499222	28499843	-116638793	-	L1ME4a	LINE	L1	-172	5952	5305	3
chr8	28506339	28506340	chunk0189_456_1	7.14391	AR_DHT_Control	chr8	28506261	28506468	-116632168	+	MIRc	SINE	MIR	17	265	-3	3
chr8	28515645	28515646	chunk0189_457_1	5.52722	AR_DHT_Control	chr8	28515220	28515825	-116622811	-	MER50	LTR	ERV1	-12	722	101	3
chr8	28556782	28556783	chunk0190_1_1	6.35715	AR_DHT_Control	chr8	28556584	28556797	-116581839	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr8	28652285	28652286	chunk0190_3_1	9.70003	AR_DHT_Control	chr8	28652060	28652375	-116486261	-	L1MB4	LINE	L1	-388	5792	5485	3
chr8	28800189	28800190	chunk0190_8_1	12.89803	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	28799978	28800213	-116338423	+	L2b	LINE	L2	3140	3387	0	3
chr8	28845021	28845022	chunk0190_14_1	35.5503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	28844825	28845054	-116293582	-	Tigger2	DNA	TcMar-Tigger	-2464	254	1	3
chr8	29097543	29097544	chunk0190_22_1	12.93187	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	29096583	29097572	-116041064	+	L1MEf	LINE	L1	1741	2734	-3412	3
chr8	29185403	29185404	chunk0190_25_1	32.01536	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	29185105	29185480	-115953156	+	L2c	LINE	L2	2960	3382	-5	3
chr8	29314567	29314568	chunk0190_36_1	14.7449	AR_DHT_Control	chr8	29313474	29314673	-115823963	+	SATR2	Satellite	Satellite	1	1139	-61	3
chr8	29376007	29376008	chunk0190_43_1	11.8541	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	29375768	29376182	-115762454	-	L1ME2	LINE	L1	-3	6161	5728	3
chr8	29401684	29401685	chunk0190_49_1	108.5782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	29401674	29401752	-115736884	-	L1ME4b	LINE	L1	-108	784	706	3
chr8	29680150	29680151	chunk0190_54_1	8.55856	AR_DHT_Control	chr8	29679779	29680307	-115458329	+	L1MC4	LINE	L1	6461	7082	-960	3
chr8	29705917	29705918	chunk0190_57_1	9.22937	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	29705882	29706102	-115432534	-	L1PB2	LINE	L1	-711	5440	5222	3
chr8	29715473	29715474	chunk0190_59_1	21.04174	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	29715039	29715827	-115422809	-	L1ME1	LINE	L1	0	6179	5381	3
chr8	29724494	29724495	chunk0190_60_1	6.60988	AR_DHT_Control	chr8	29724271	29724532	-115414104	+	MER113A	DNA	hAT-Charlie	47	313	-1	3
chr8	29770425	29770426	chunk0190_67_1	69.5787	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	29770197	29770431	-115368205	+	MIRb	SINE	MIR	30	268	0	3
chr8	29910448	29910449	chunk0190_74_1	7.22694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	29909444	29912127	-115226509	+	L1M2	LINE	L1	3	2728	-4121	3
chr8	29923769	29923770	chunk0190_75_1	261.5927	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	29923577	29924507	-115214129	-	L1ME4b	LINE	L1	-239	653	24	3
chr8	30005886	30005887	chunk0190_80_1	16.7683	AR_DHT_Control	chr8	30005502	30006054	-115132582	+	LTR101_Mam	LTR	ERVL	21	627	-202	3
chr8	30091902	30091903	chunk0190_86_1	14.85196	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	30091567	30092018	-115046618	+	(CACA)n	Simple_repeat	Simple_repeat	1	457	0	3
chr8	30369953	30369954	chunk0190_105_1	85.0549	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	30369565	30370071	-114768565	+	L1ME3G	LINE	L1	5301	5770	-354	3
chr8	30383836	30383837	chunk0190_107_1	15.1886	AR_DHT_Control	chr8	30383711	30383864	-114754772	-	L2c	LINE	L2	0	3387	3258	3
chr8	30427402	30427403	chunk0190_111_1	61.60149	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	30427369	30427731	-114710905	+	L2c	LINE	L2	2952	3373	-14	3
chr8	30476310	30476311	chunk0190_113_1	4.84918	AR_DHT_Control	chr8	30476122	30476319	-114662317	-	MIR	SINE	MIR	-50	212	2	3
chr8	30603707	30603708	chunk0190_125_1	49.7121	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	30603348	30603751	-114534885	+	L1M5	LINE	L1	2190	2610	-3536	3
chr8	30615839	30615840	chunk0190_128_1	14.0915	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	30615664	30616159	-114522477	+	L1MC1	LINE	L1	5489	5978	-355	3
chr8	30657019	30657020	chunk0190_131_1	11.4842	AR_DHT_Control	chr8	30656840	30657035	-114481601	-	MIRc	SINE	MIR	-34	234	12	3
chr8	30675888	30675889	chunk0190_132_1	283.6934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	30675798	30675921	-114462715	+	MER94	DNA	hAT-Blackjack	2	133	-1	3
chr8	30981215	30981216	chunk0190_148_1	34.95624	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	30979975	30981628	-114157008	+	L1ME1	LINE	L1	4299	6016	-163	3
chr8	31165719	31165720	chunk0190_152_1	19.94026	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	31165389	31165747	-113972889	-	Charlie5	DNA	hAT-Charlie	0	2624	2257	3
chr8	31260280	31260281	chunk0190_157_1	12.168	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	31259702	31260691	-113877945	-	L1ME3A	LINE	L1	-3087	3232	2222	3
chr8	31299305	31299306	chunk0190_158_1	6.80366	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	31299278	31299455	-113839181	+	MER20	DNA	hAT-Charlie	36	219	0	3
chr8	31352031	31352032	chunk0190_159_1	8.67138	AR_DHT_Control	chr8	31351441	31352200	-113786436	-	LTR39	LTR	ERV1	-9	774	3	3
chr8	32353825	32353826	chunk0190_172_1	15.28385	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	32353495	32354086	-112784550	+	L1ME1	LINE	L1	5318	5908	-271	3
chr8	32449992	32449993	chunk0190_173_1	10.1791	AR_DHT_Control	chr8	32449559	32450016	-112688620	-	L2c	LINE	L2	0	3387	2918	3
chr8	32958458	32958459	chunk0190_177_1	24.966	AR_DHT_Control	chr8	32958206	32959007	-112179629	-	L1PA16	LINE	L1	-9	6157	5361	3
chr8	33377295	33377296	chunk0190_181_1	23.16533	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	33377253	33377399	-111761237	+	L3	LINE	CR1	3864	3997	-102	3
chr8	33485978	33485979	chunk0190_190_1	7.92341	AR_DHT_Control	chr8	33485729	33486041	-111652595	-	L2a	LINE	L2	-28	3398	3041	3
chr8	33513503	33513504	chunk0190_191_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	33513473	33513581	-111625055	+	U13	snRNA	snRNA	1	108	0	3
chr8	33560383	33560384	chunk0190_193_1	76.36866	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	33560372	33560538	-111578098	-	AluJo	SINE	Alu	-12	300	137	3
chr8	34697011	34697012	chunk0190_203_1	46.8895	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	34696675	34697314	-110441322	-	L1MD	LINE	L1	-1687	4459	3791	3
chr8	35178407	35178408	chunk0190_204_1	15.54852	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	35178020	35178843	-109959793	+	L1PB3	LINE	L1	2661	3588	-3274	3
chr8	35818922	35818923	chunk0190_227_1	93.2647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	35817860	35822171	-109316465	+	L1PA8	LINE	L1	3293	7607	0	3
chr8	35826386	35826387	chunk0190_229_1	8.21385	AR_DHT_Control	chr8	35826249	35826448	-109312188	+	HAL1	LINE	L1	17	226	-2281	3
chr8	35872627	35872628	chunk0190_233_1	31.1886	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	35872517	35872749	-109265887	+	MIRb	SINE	MIR	20	227	-41	3
chr8	36574008	36574009	chunk0190_236_1	7.20445	AR_DHT_Control	chr8	36573736	36574124	-108564512	-	LTR18A	LTR	ERVL	0	357	1	3
chr8	36783328	36783329	chunk0190_238_1	13.40891	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	36783323	36783695	-108354941	-	L1MA4	LINE	L1	-3	6297	5913	3
chr8	36978483	36978484	chunk0190_252_1	15.3451	AR_DHT_Control	chr8	36978288	36978618	-108160018	+	MER58B	DNA	hAT-Charlie	1	338	-3	3
chr8	37003947	37003948	chunk0190_255_1	66.99428	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	37003784	37004145	-108134491	-	L2a	LINE	L2	-54	3372	2986	3
chr8	37110840	37110841	chunk0190_259_1	29.4434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	37109553	37111053	-108027583	+	L1PREC2	LINE	L1	3740	5331	-815	3
chr8	37351229	37351230	chunk0190_268_1	21.64954	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	37350630	37351354	-107787282	-	L1ME3F	LINE	L1	-253	5990	5218	3
chr8	37758060	37758061	chunk0190_282_1	23.53583	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	37757983	37758172	-107380464	-	MER53	DNA	hAT	0	193	1	3
chr8	38016296	38016297	chunk0190_294_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	38015995	38016357	-107122279	+	MER4-int	LTR	ERV1	1922	2258	-3328	3
chr8	38016296	38016297	chunk0190_294_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	38016114	38016519	-107122117	+	MER4B-int	LTR	ERV1	1418	1803	-4955	3
chr8	38090058	38090059	chunk0190_300_1	9.50609	AR_DHT_Control	chr8	38087764	38090706	-107047930	-	HERV1_I-int	LTR	ERV1	-5205	3596	667	3
chr8	38546451	38546452	chunk0190_315_1	21.4973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	38546388	38546526	-106592110	-	HAL1	LINE	L1	-1	2506	2369	3
chr8	38793319	38793320	chunk0190_321_1	13.53941	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	38793313	38793459	-106345177	+	MER58B	DNA	hAT-Charlie	4	173	-168	3
chr8	38890192	38890193	chunk0190_326_1	20.39804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	38890151	38890551	-106248085	-	L1MD1	LINE	L1	-246	5996	5595	3
chr8	39001420	39001421	chunk0190_331_1	223.6284	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39001369	39001480	-106137156	-	L2c	LINE	L2	-2	3385	3274	3
chr8	39032019	39032020	chunk0190_334_1	9.44294	AR_DHT_Control	chr8	39031444	39032803	-106105833	-	L1P2	LINE	L1	-4816	1368	5	3
chr8	39089839	39089840	chunk0190_335_1	158.78372	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39089268	39089961	-106048675	+	L1ME4b	LINE	L1	142	864	-28	3
chr8	39095665	39095666	chunk0190_338_1	7.47918	AR_DHT_Control	chr8	39095358	39095969	-106042667	-	L1MEd	LINE	L1	-3217	3162	2530	3
chr8	39099744	39099745	chunk0190_339_1	5.60881	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39099675	39099806	-106038830	-	L1MA7	LINE	L1	0	6291	6157	3
chr8	39194505	39194506	chunk0190_340_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39191942	39195268	-105943368	-	L1PA13	LINE	L1	-3733	3033	1	3
chr8	39218443	39218444	chunk0190_341_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39215476	39219689	-105918947	-	L1MA3	LINE	L1	-3103	4462	160	3
chr8	39237471	39237472	chunk0190_344_1	9.23066	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	39236836	39240503	-105898133	+	L1PB1	LINE	L1	1	3782	-3080	3
chr8	39240152	39240153	chunk0190_345_1	38.563	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	39236836	39240503	-105898133	+	L1PB1	LINE	L1	1	3782	-3080	3
chr8	39255881	39255882	chunk0190_347_1	19.03355	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	39254716	39256134	-105882502	-	L1PB1	LINE	L1	0	6151	4745	3
chr8	39365422	39365423	chunk0190_349_1	6.48643	AR_DHT_Control	chr8	39364986	39365987	-105772649	+	L1MB7	LINE	L1	4941	5985	-1580	3
chr8	39673031	39673032	chunk0190_354_1	5.77762	AR_DHT_Control	chr8	39671745	39673033	-105465603	+	ERV3-16A3_I-int	LTR	ERVL	730	2173	-2823	3
chr8	39676073	39676074	chunk0190_355_1	5.24411	AR_DHT_Control	chr8	39673612	39676777	-105461859	-	L1P2	LINE	L1	-2985	3334	180	3
chr8	39695105	39695106	chunk0190_356_1	36.2912	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39694593	39695568	-105443068	-	L1MC2	LINE	L1	-1	6343	5319	3
chr8	39750023	39750024	chunk0190_359_1	18.62065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39749895	39750055	-105388581	-	L2a	LINE	L2	-19	3407	3224	3
chr8	39763733	39763734	chunk0190_361_1	64.6101	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	39763248	39763805	-105374831	+	LTR43B	LTR	ERV1	1	572	0	3
chr8	39852910	39852911	chunk0190_365_1	15.4733	AR_DHT_Control	chr8	39852577	39853109	-105285527	-	LTR10G	LTR	ERV1	-10	513	1	3
chr8	39854332	39854333	chunk0190_366_1	5.03748	AR_DHT_Control	chr8	39853111	39854758	-105283878	-	L1M4	LINE	L1	-501	5679	4070	3
chr8	39856686	39856687	chunk0190_367_1	5.48709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39856030	39857818	-105280818	+	L1M4	LINE	L1	1924	3788	-2856	3
chr8	39947530	39947531	chunk0190_373_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	39947230	39947783	-105190853	+	LTR10C	LTR	ERV1	1	555	-36	3
chr8	40024164	40024165	chunk0190_379_1	12.1886	AR_DHT_Control	chr8	40023984	40024168	-105114468	+	MIRb	SINE	MIR	21	207	-61	3
chr8	40104559	40104560	chunk0190_386_1	157.4547	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	40104458	40105671	-105032965	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	3
chr8	40147364	40147365	chunk0190_390_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	40146981	40147486	-104991150	+	L2c	LINE	L2	2830	3383	-4	3
chr8	40180205	40180206	chunk0190_395_1	15.3832	AR_DHT_Control	chr8	40179618	40180401	-104958235	-	LTR78	LTR	ERV1	-475	829	1	3
chr8	40187021	40187022	chunk0190_397_1	8.95279	AR_DHT_Control	chr8	40186917	40187058	-104951578	-	L2a	LINE	L2	-4	3422	3272	3
chr8	40243532	40243533	chunk0190_400_1	80.9992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	40242459	40244067	-104894569	+	L1PB1	LINE	L1	4178	5779	-372	3
chr8	40371256	40371257	chunk0190_404_1	63.98842	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	40371216	40371324	-104767312	+	LTR82A	LTR	ERVL	11	123	-749	3
chr8	40378564	40378565	chunk0190_406_1	20.9692	AR_DHT_Control	chr8	40378402	40378659	-104759977	-	Tigger3c	DNA	TcMar-Tigger	-1	601	352	3
chr8	41055761	41055762	chunk0190_415_1	25.71633	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	41055665	41055891	-104082745	-	hAT-N1_Mam	DNA	hAT-Tip100?	0	340	103	3
chr8	41175824	41175825	chunk0190_417_1	18.8646	AR_DHT_Control	chr8	41175722	41175899	-103962737	+	LTR88b	LTR	Gypsy?	258	445	-392	3
chr8	41225349	41225350	chunk0190_418_1	7.36432	AR_DHT_Control	chr8	41225008	41231111	-103907525	+	L1PA6	LINE	L1	5	6149	-5	3
chr8	41225808	41225809	chunk0190_419_1	7.36432	AR_DHT_Control	chr8	41225008	41231111	-103907525	+	L1PA6	LINE	L1	5	6149	-5	3
chr8	41442765	41442766	chunk0190_426_1	50.6982	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	41442728	41442871	-103695765	-	MLT1J	LTR	ERVL-MaLR	-2	510	367	3
chr8	41816039	41816040	chunk0190_446_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	41814376	41816390	-103322246	-	MER34B-int	LTR	ERV1	-1615	3741	1683	3
chr8	42023376	42023377	chunk0190_449_1	6.44773	AR_DHT_Control	chr8	42022898	42023495	-103115141	-	Tigger3b	DNA	TcMar-Tigger	0	1231	625	3
chr8	42104801	42104802	chunk0190_454_1	13.97361	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	42104012	42104988	-103033648	+	L1MEc	LINE	L1	5	1005	-5395	3
chr8	42151906	42151907	chunk0190_457_1	5.16739	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	42151843	42152040	-102986596	-	MIR	SINE	MIR	-60	202	2	3
chr8	42245683	42245684	chunk0190_458_1	5.95444	AR_DHT_Control	chr8	42245521	42245710	-102892926	+	LTR84b	LTR	ERVL	541	753	-8	3
chr8	42338729	42338730	chunk0191_2_1	27.75476	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	42338711	42338751	-102799885	+	(CTTC)n	Simple_repeat	Simple_repeat	1	44	0	3
chr8	42351466	42351467	chunk0191_3_1	7.36432	AR_DHT_Control	chr8	42351327	42351498	-102787138	-	Tigger15a	DNA	TcMar-Tigger	-227	488	320	3
chr8	42895479	42895480	chunk0191_22_1	7.91724	AR_DHT_Control	chr8	42895459	42896005	-102242631	+	L1ME3A	LINE	L1	5564	6219	-23	3
chr8	42909800	42909801	chunk0191_23_1	8.30315	AR_DHT_Control	chr8	42909760	42910205	-102228431	+	L1MA7	LINE	L1	5816	6284	-7	3
chr8	42910560	42910561	chunk0191_25_1	160.2561	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	42910412	42910667	-102227969	-	L1ME3	LINE	L1	-60	6102	5823	3
chr8	42916611	42916612	chunk0191_26_1	19.93775	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	42916484	42916925	-102221711	+	LTR56	LTR	ERV1	6	445	0	3
chr8	43050830	43050831	chunk0191_32_1	20.96362	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	43050721	43050984	-102087652	-	L1ME3B	LINE	L1	-86	6156	5860	3
chr8	43056222	43056223	chunk0191_33_1	6.38514	AR_DHT_Control	chr8	43056171	43056229	-102082407	+	(CGCAGCC)n	Simple_repeat	Simple_repeat	1	61	0	3
chr8	43065764	43065765	chunk0191_34_1	8.62581	AR_DHT_Control	chr8	43065730	43066262	-102072374	-	HAL1	LINE	L1	-715	1792	1047	3
chr8	43067413	43067414	chunk0191_36_1	24.7295	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	43067315	43067502	-102071134	-	HAL1	LINE	L1	-2319	188	1	3
chr8	43099911	43099912	chunk0191_38_1	15.2389	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	43099716	43099932	-102038704	-	L2b	LINE	L2	-1767	1652	1424	3
chr8	43139848	43139849	chunk0191_40_1	5.14476	AR_DHT_Control	chr8	43139805	43139931	-101998705	-	L1M5	LINE	L1	-480	5762	5631	3
chr8	43211983	43211984	chunk0191_43_1	12.7163	AR_DHT_Control	chr8	43211827	43212036	-101926600	-	MIRb	SINE	MIR	-12	256	45	3
chr8	43240864	43240865	chunk0191_45_1	15.3274	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	43237602	43242377	-101896259	+	SAR	Satellite	Satellite	1	4758	0	3
chr8	43305570	43305571	chunk0191_47_1	13.2288	AR_DHT_Control	chr8	43305555	43305683	-101832953	-	Zaphod2	DNA	hAT-Tip100	-3316	208	81	3
chr8	43365878	43365879	chunk0191_48_1	7.63982	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	43363497	43366364	-101772272	+	L1PA12	LINE	L1	520	3268	-4887	3
chr8	43411014	43411015	chunk0191_51_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	43410402	43411125	-101727511	-	L1P4d	LINE	L1	-5823	1112	397	3
chr8	46491187	46491188	chunk0191_52_1	116.6218	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	46490923	46491378	-98647258	-	LTR3A	LTR	ERVK	-29	455	1	3
chr8	46583976	46583977	chunk0191_57_1	34.1171	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	46583436	46585580	-98553056	+	HERVK11-int	LTR	ERVK	1399	3589	-4364	3
chr8	46671567	46671568	chunk0191_58_1	31.6756	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	46671553	46671803	-98466833	+	MIRb	SINE	MIR	9	268	0	3
chr8	46902902	46902903	chunk0191_60_1	9.79111	AR_DHT_Control	chr8	46902869	46902978	-98235658	+	L2a	LINE	L2	3311	3426	0	3
chr8	46962419	46962420	chunk0191_63_1	9.93187	AR_DHT_Control	chr8	46962228	46962628	-98176008	-	LTR57	LTR	ERVL	0	411	1	3
chr8	47101344	47101345	chunk0191_64_1	19.32934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	47101274	47101368	-98037268	-	L2c	LINE	L2	0	3375	3276	3
chr8	47129647	47129648	chunk0191_65_1	122.7308	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	47129539	47129684	-98008952	+	Zaphod2	DNA	hAT-Tip100	155	306	-3218	3
chr8	47147901	47147902	chunk0191_68_1	42.53825	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	47147205	47148658	-97989978	+	L1PA16	LINE	L1	4631	6152	-14	3
chr8	47460200	47460201	chunk0191_77_1	15.3744	AR_DHT_Control	chr8	47458392	47460379	-97678257	-	L1PB1	LINE	L1	-1748	5114	3050	3
chr8	47604894	47604895	chunk0191_82_1	5.81334	AR_DHT_Control	chr8	47604481	47604915	-97533721	-	L2c	LINE	L2	-655	2764	2317	3
chr8	47638088	47638089	chunk0191_88_1	28.7	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	47637583	47638276	-97500360	-	L1MC3	LINE	L1	-378	7407	6721	3
chr8	47764121	47764122	chunk0191_96_1	7.17788	AR_DHT_Control	chr8	47763672	47764235	-97374401	+	(GT)n	Simple_repeat	Simple_repeat	1	602	0	3
chr8	48008444	48008445	chunk0191_101_1	8.27376	AR_DHT_Control	chr8	48008410	48008446	-97130190	+	(GTGC)n	Simple_repeat	Simple_repeat	1	40	0	3
chr8	48140949	48140950	chunk0191_107_1	32.41809	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	48140203	48141045	-96997591	+	L1ME3G	LINE	L1	12	868	-56	3
chr8	48254268	48254269	chunk0191_112_1	8.55856	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	48251665	48254527	-96884109	-	L1PBa	LINE	L1	-3542	3320	327	3
chr8	48269930	48269931	chunk0191_115_1	90.88748	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	48269879	48270160	-96868476	+	Arthur1C	DNA	hAT-Tip100	1	296	-67	3
chr8	48292721	48292722	chunk0191_118_1	62.8353	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	48290732	48293765	-96844871	-	L1MD1	LINE	L1	0	6633	3722	3
chr8	48558006	48558007	chunk0191_125_1	6.17841	AR_DHT_Control	chr8	48557966	48558302	-96580334	-	L1MD2	LINE	L1	-132	6618	6278	3
chr8	48946033	48946034	chunk0191_152_1	46.4015	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	48945093	48946796	-96191840	-	L1P2	LINE	L1	-4496	1688	1	3
chr8	49078781	49078782	chunk0191_157_1	112.9575	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	49077915	49078832	-96059804	+	L2c	LINE	L2	2437	3373	-14	3
chr8	49156425	49156426	chunk0191_160_1	15.01953	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	49156288	49156586	-95982050	+	L2a	LINE	L2	3051	3418	-8	3
chr8	49713110	49713111	chunk0191_163_1	10.651	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	49712777	49713396	-95425240	-	L1MDb	LINE	L1	-5617	923	181	3
chr8	50617085	50617086	chunk0191_169_1	7.69414	AR_DHT_Control	chr8	50616812	50617318	-94521318	+	L2a	LINE	L2	2904	3426	0	3
chr8	50630718	50630719	chunk0191_170_1	10.802	AR_DHT_Control	chr8	50630678	50631295	-94507341	+	LTR68	LTR	ERV1	139	740	0	3
chr8	51226404	51226405	chunk0191_180_1	35.8961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	51225840	51227172	-93911464	+	L1M4b	LINE	L1	4329	5727	-1279	3
chr8	51630485	51630486	chunk0191_188_1	19.43811	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	51629845	51631449	-93507187	+	L1PA15	LINE	L1	4548	6157	-8	3
chr8	51722273	51722274	chunk0191_191_1	7.47392	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	51722201	51722967	-93415669	-	LTR1F1	LTR	ERV1	0	729	1	3
chr8	51841879	51841880	chunk0191_195_1	44.8887	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	51841841	51842054	-93296582	+	MER58A	DNA	hAT-Charlie	16	218	-6	3
chr8	51859772	51859773	chunk0191_198_1	6.3126	AR_DHT_Control	chr8	51859770	51859823	-93278813	+	L2a	LINE	L2	2824	2878	-541	3
chr8	51884797	51884798	chunk0191_199_1	10.6691	AR_DHT_Control	chr8	51884585	51885073	-93253563	+	LTR41	LTR	ERVL	124	768	0	3
chr8	51973774	51973775	chunk0191_201_1	8.46955	AR_DHT_Control	chr8	51973413	51973909	-93164727	-	L1M4	LINE	L1	-6466	1051	525	3
chr8	52013308	52013309	chunk0191_203_1	34.67345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	52013018	52013450	-93125186	+	Charlie7	DNA	hAT-Charlie	54	507	-2105	3
chr8	52276341	52276342	chunk0191_211_1	6.48643	AR_DHT_Control	chr8	52276307	52276442	-92862194	+	(AC)n	Simple_repeat	Simple_repeat	1	142	0	3
chr8	52321156	52321157	chunk0191_214_1	5.6503	AR_DHT_Control	chr8	52320482	52321399	-92817237	+	L1ME3Cz	LINE	L1	7	983	-14	3
chr8	52588236	52588237	chunk0191_220_1	4.30231	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	52588053	52589528	-92549108	-	L1MEf	LINE	L1	-4232	2408	941	3
chr8	52695716	52695717	chunk0191_221_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	52695356	52696025	-92442611	+	MER77	LTR	ERVL	49	774	-164	3
chr8	52707063	52707064	chunk0191_222_1	5.73469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	52706983	52707215	-92431421	+	MIRc	SINE	MIR	2	268	0	3
chr8	52743586	52743587	chunk0191_225_1	15.4338	AR_DHT_Control	chr8	52743250	52743814	-92394822	+	L1ME1	LINE	L1	5538	6114	-238	3
chr8	52754144	52754145	chunk0191_227_1	132.5317	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	52753855	52754799	-92383837	-	MER65-int	LTR	ERV1	-3848	1023	71	3
chr8	52832251	52832252	chunk0191_233_1	14.6997	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	52831078	52832708	-92305928	-	L1ME3B	LINE	L1	-211	6031	4186	3
chr8	53008924	53008925	chunk0191_241_1	7.92366	AR_DHT_Control	chr8	53008488	53010119	-92128517	-	L1MB8	LINE	L1	-54	6124	4494	3
chr8	53039289	53039290	chunk0191_242_1	39.1697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	53039254	53039340	-92099296	-	L1MC3	LINE	L1	-504	7281	7192	3
chr8	53051930	53051931	chunk0191_243_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	53051828	53052307	-92086329	-	L1PA15	LINE	L1	-6295	490	1	3
chr8	53176862	53176863	chunk0191_246_1	5.36932	AR_DHT_Control	chr8	53176751	53177213	-91961423	-	LTR55	LTR	ERVL?	-16	532	29	3
chr8	53214470	53214471	chunk0191_249_1	5.40567	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	53212063	53215611	-91923025	-	L1PREC2	LINE	L1	-3237	3529	13	3
chr8	53354216	53354217	chunk0191_256_1	58.43765	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	53354171	53354516	-91784120	-	MLT1D	LTR	ERVL-MaLR	-131	374	1	3
chr8	53383742	53383743	chunk0191_258_1	10.186	AR_DHT_Control	chr8	53383593	53384277	-91754359	+	L1MA7	LINE	L1	5611	6291	0	3
chr8	53386945	53386946	chunk0191_259_1	6.04605	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	53386940	53386971	-91751665	+	(A)n	Simple_repeat	Simple_repeat	1	31	0	3
chr8	53564573	53564574	chunk0191_266_1	12.18481	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	53564468	53564678	-91573958	+	MSTA	LTR	ERVL-MaLR	171	428	0	3
chr8	53692982	53692983	chunk0191_273_1	12.93231	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	53692933	53692988	-91445648	-	L2a	LINE	L2	-13	3413	3356	3
chr8	53910595	53910596	chunk0191_284_1	25.05931	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	53910270	53910884	-91227752	+	L1ME1	LINE	L1	5322	5951	-228	3
chr8	53920482	53920483	chunk0191_287_1	20.10239	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	53920172	53920764	-91217872	-	L1MB7	LINE	L1	-1662	5344	4785	3
chr8	54065081	54065082	chunk0191_288_1	19.68186	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	54065007	54065082	-91073554	-	MIRb	SINE	MIR	-192	76	5	3
chr8	54087955	54087956	chunk0191_289_1	6.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	54087753	54088344	-91050292	-	LTR10C	LTR	ERV1	0	591	1	3
chr8	54109329	54109330	chunk0191_290_1	40.5296	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	54108359	54110165	-91028471	-	L1MA10	LINE	L1	-158	6176	4359	3
chr8	54212117	54212118	chunk0191_293_1	20.79703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	54211911	54212122	-90926514	+	MIRb	SINE	MIR	24	226	-42	3
chr8	54635984	54635985	chunk0191_300_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	54635964	54636452	-90502184	+	MER54A	LTR	ERVL	400	894	-7	3
chr8	54789737	54789738	chunk0191_302_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	54788770	54789785	-90348851	+	L1M3b	LINE	L1	1219	2248	-5248	3
chr8	55458517	55458518	chunk0191_311_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	55458217	55459002	-89679634	-	LTR1E	LTR	ERV1	0	804	1	3
chr8	55569027	55569028	chunk0191_314_1	6.40219	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	55568904	55569095	-89569541	-	MER45B	DNA	hAT-Tip100	-3	1037	757	3
chr8	55681548	55681549	chunk0191_315_1	61.16502	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	55681450	55681550	-89457086	+	AluJr	SINE	Alu	1	100	-212	3
chr8	55685668	55685669	chunk0191_317_1	62.6281	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	55685611	55685752	-89452884	+	MIRb	SINE	MIR	102	265	-3	3
chr8	55774601	55774602	chunk0191_320_1	69.1955	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	55774588	55774971	-89363665	-	L2c	LINE	L2	0	3387	2974	3
chr8	55872769	55872770	chunk0191_322_1	57.82101	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	55872707	55872795	-89265841	-	MIRb	SINE	MIR	-80	188	91	3
chr8	56005317	56005318	chunk0191_335_1	11.0326	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	56005086	56005332	-89133304	-	L1MB3	LINE	L1	-241	5942	5832	3
chr8	56028088	56028089	chunk0191_339_1	15.2971	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	56027904	56028658	-89109978	+	L1MC3	LINE	L1	6837	7623	-162	3
chr8	56387814	56387815	chunk0191_346_1	331.7139	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	56387764	56387874	-88750762	-	L2b	LINE	L2	-255	3120	3011	3
chr8	56400288	56400289	chunk0191_350_1	4.933	AR_DHT_Control	chr8	56399616	56400481	-88738155	-	L1MC1	LINE	L1	-2	6331	5446	3
chr8	56435815	56435816	chunk0191_351_1	23.44973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	56435680	56436456	-88702180	+	L1ME3A	LINE	L1	5699	6161	-12	3
chr8	56453827	56453828	chunk0191_355_1	32.8128	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	56452941	56454699	-88683937	+	L1MCa	LINE	L1	1515	3321	-3000	3
chr8	56656877	56656878	chunk0191_358_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	56656789	56656945	-88481691	+	L2b	LINE	L2	3205	3362	-13	3
chr8	56741150	56741151	chunk0191_360_1	6.58746	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	56741135	56741241	-88397395	-	MIRb	SINE	MIR	-16	252	127	3
chr8	56999311	56999312	chunk0191_377_1	5.6425	AR_DHT_Control	chr8	56999269	56999753	-88138883	+	LTR40a	LTR	ERVL	1	519	0	3
chr8	57023692	57023693	chunk0191_378_1	27.762	AR_DHT_Control	chr8	57023205	57023748	-88114888	+	L1ME2	LINE	L1	5657	6219	-118	3
chr8	57029657	57029658	chunk0191_383_1	105.5937	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	57029226	57029799	-88108837	-	L2a	LINE	L2	-942	2477	1798	3
chr8	57084723	57084724	chunk0191_384_1	9.68843	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57084028	57085249	-88053387	+	L1PB1	LINE	L1	5055	6258	-359	3
chr8	57205927	57205928	chunk0191_387_1	60.6572	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	57205914	57206586	-87932050	-	MER50	LTR	ERV1	-29	705	28	3
chr8	57210169	57210170	chunk0191_390_1	48.7292	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr8	57210108	57210427	-87928209	-	MER50	LTR	ERV1	-134	600	286	3
chr8	57503359	57503360	chunk0191_397_1	14.52487	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	57502897	57504284	-87634352	-	L1MDa	LINE	L1	-4648	1985	518	3
chr8	57544562	57544563	chunk0191_401_1	60.91302	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	57544366	57544616	-87594020	+	MIR	SINE	MIR	10	260	-2	3
chr8	57545203	57545204	chunk0191_402_1	8.90584	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57545014	57545239	-87593397	-	L2	LINE	L2	-527	2892	2629	3
chr8	57571600	57571601	chunk0191_404_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	57571084	57571692	-87566944	+	L2c	LINE	L2	2650	3293	-94	3
chr8	57721257	57721258	chunk0191_414_1	31.69768	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	57721104	57721274	-87417362	-	L2b	LINE	L2	0	3375	3193	3
chr8	57732477	57732478	chunk0191_415_1	24.54226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57731667	57732844	-87405792	-	Tigger3b	DNA	TcMar-Tigger	-11	1220	1	3
chr8	57753504	57753505	chunk0191_420_1	7.09248	AR_DHT_Control	chr8	57753233	57753728	-87384908	+	L1MEh	LINE	L1	684	1184	-1051	3
chr8	57804629	57804630	chunk0191_424_1	53.1242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57804616	57804633	-87334003	+	(AG)n	Simple_repeat	Simple_repeat	1	17	0	3
chr8	57833075	57833076	chunk0191_428_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57832941	57834506	-87304130	-	L1M4a2	LINE	L1	-2457	3689	1887	3
chr8	57888427	57888428	chunk0191_436_1	33.33832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	57888226	57888798	-87249838	+	L1ME3D	LINE	L1	5424	6036	-206	3
chr8	57902829	57902830	chunk0191_438_1	32.9498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	57902665	57903051	-87235585	+	L1M7	LINE	L1	1573	1962	-4256	3
chr8	57940499	57940500	chunk0191_440_1	8.03415	AR_DHT_Control	chr8	57940440	57940660	-87197976	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr8	57988602	57988603	chunk0191_444_1	9.13189	AR_DHT_Control	chr8	57988443	57988689	-87149947	+	LTR33A	LTR	ERVL	217	470	-50	3
chr8	58067668	58067669	chunk0191_454_1	41.0261	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58067465	58067791	-87070845	+	L2a	LINE	L2	3071	3426	0	3
chr8	58191786	58191787	chunk0192_5_1	63.15714	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	58191703	58191911	-86946725	-	MER58A	DNA	hAT-Charlie	-10	214	5	3
chr8	58236965	58236966	chunk0192_6_1	6.48643	AR_DHT_Control	chr8	58236760	58236991	-86901645	+	MIRb	SINE	MIR	20	268	0	3
chr8	58245949	58245950	chunk0192_7_1	10.186	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58245496	58248321	-86890315	+	L1MEb	LINE	L1	151	2855	-3291	3
chr8	58385846	58385847	chunk0192_13_1	15.57437	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58385012	58386024	-86752612	-	L1MC2	LINE	L1	-222	6122	5110	3
chr8	58404142	58404143	chunk0192_15_1	4.33257	AR_DHT_Control	chr8	58403738	58404375	-86734261	+	Tigger17a	DNA	TcMar-Tigger	1	654	0	3
chr8	58455723	58455724	chunk0192_19_1	19.94314	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	58455666	58455928	-86682708	+	L2a	LINE	L2	3111	3426	0	3
chr8	58489240	58489241	chunk0192_26_1	45.52801	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58489122	58489460	-86649176	-	MER58B	DNA	hAT-Charlie	-1	340	1	3
chr8	58506122	58506123	chunk0192_27_1	11.757	AR_DHT_Control	chr8	58506036	58506245	-86632391	+	MIRb	SINE	MIR	46	263	-5	3
chr8	58549922	58549923	chunk0192_28_1	15.8634	AR_DHT_Control	chr8	58549723	58550314	-86588322	-	L1MC3	LINE	L1	-1935	5850	5255	3
chr8	58560336	58560337	chunk0192_29_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	58559675	58560549	-86578087	+	L1MB7	LINE	L1	677	1341	-5224	3
chr8	58613449	58613450	chunk0192_30_1	13.197	AR_DHT_Control	chr8	58612856	58613593	-86525043	+	L1MEf	LINE	L1	1535	2277	-4138	3
chr8	58636689	58636690	chunk0192_32_1	147.933	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58636573	58636788	-86501848	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr8	58648847	58648848	chunk0192_34_1	6.25666	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	58647862	58649499	-86489137	+	MSTB-int	LTR	ERVL-MaLR	2	1651	0	3
chr8	58889361	58889362	chunk0192_49_1	11.1388	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	58888907	58889412	-86249224	+	L1ME4b	LINE	L1	195	652	-240	3
chr8	59394954	59394955	chunk0192_52_1	12.3053	AR_DHT_Control	chr8	59394764	59395294	-85743342	-	Tigger3c	DNA	TcMar-Tigger	0	602	1	3
chr8	59566211	59566212	chunk0192_53_1	12.8376	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	59565729	59566834	-85571802	+	L1PB1	LINE	L1	4673	5791	-360	3
chr8	59718470	59718471	chunk0192_56_1	7.3092	AR_DHT_Control	chr8	59718470	59718835	-85419801	-	Tigger2	DNA	TcMar-Tigger	-2	2716	2334	3
chr8	59741586	59741587	chunk0192_57_1	4.83532	AR_DHT_Control	chr8	59741574	59741750	-85396886	-	Charlie29a	DNA	hAT-Charlie	-66	653	450	3
chr8	60343660	60343661	chunk0192_63_1	10.8679	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	60342485	60344582	-84794054	+	L1PA14	LINE	L1	6078	8153	-3	3
chr8	60505141	60505142	chunk0192_68_1	9.77797	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	60504983	60505232	-84633404	-	Arthur1	DNA	hAT-Tip100	-858	3089	2794	3
chr8	60593437	60593438	chunk0192_70_1	15.41963	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	60593295	60593543	-84545093	+	L1MD1	LINE	L1	159	415	-6218	3
chr8	60698015	60698016	chunk0192_73_1	19.4718	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	60697912	60698109	-84440527	+	MamRTE1	LINE	RTE-BovB	1447	1645	-2167	3
chr8	60719018	60719019	chunk0192_75_1	11.2868	AR_DHT_Control	chr8	60718494	60719128	-84419508	+	Tigger3b	DNA	TcMar-Tigger	562	1230	-1	3
chr8	60763339	60763340	chunk0192_78_1	16.746	AR_DHT_Control	chr8	60763099	60763403	-84375233	-	MER33	DNA	hAT-Charlie	-29	295	5	3
chr8	60812857	60812858	chunk0192_79_1	51.8144	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	60812679	60813803	-84324833	-	L1MC4a	LINE	L1	-1256	4890	3742	3
chr8	61331294	61331295	chunk0192_92_1	23.00735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	61331123	61331804	-83806832	-	HAL1	LINE	L1	-908	1599	926	3
chr8	61418997	61418998	chunk0192_95_1	32.87915	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	61418951	61419012	-83719624	+	L2a	LINE	L2	3344	3409	-17	3
chr8	61442351	61442352	chunk0192_97_1	32.0209	AR_DHT_Control	chr8	61442011	61442610	-83696026	-	L1MD1	LINE	L1	-163	6470	5880	3
chr8	61657452	61657453	chunk0192_103_1	86.31917	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	61657267	61657619	-83481017	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	3
chr8	61725228	61725229	chunk0192_114_1	11.5331	AR_DHT_Control	chr8	61725176	61725302	-83413334	-	L2c	LINE	L2	-9	3378	3243	3
chr8	61738355	61738356	chunk0192_118_1	25.75236	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	61738327	61738614	-83400022	-	LTR107_Mam	LTR	LTR	-181	389	102	3
chr8	61740421	61740422	chunk0192_119_1	8.98795	AR_DHT_Control	chr8	61740339	61740667	-83397969	+	L1MEd	LINE	L1	2041	2444	-3702	3
chr8	61750406	61750407	chunk0192_120_1	15.3744	AR_DHT_Control	chr8	61750038	61750735	-83387901	+	MER21C	LTR	ERVL	131	815	-123	3
chr8	61805655	61805656	chunk0192_128_1	24.2161	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	61805157	61806341	-83332295	-	ERVL-E-int	LTR	ERVL	-879	4788	3561	3
chr8	61836173	61836174	chunk0192_131_1	7.45557	AR_DHT_Control	chr8	61835758	61836993	-83301643	-	L1M2	LINE	L1	-4868	1981	690	3
chr8	61844388	61844389	chunk0192_132_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	61844231	61844961	-83293675	+	LTR49-int	LTR	ERV1	4413	5840	-918	3
chr8	61988991	61988992	chunk0192_141_1	86.6847	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	61988766	61989142	-83149494	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	3
chr8	62044092	62044093	chunk0192_149_1	32.32343	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	62043143	62044357	-83094279	-	L1MC4a	LINE	L1	-26	7856	6674	3
chr8	62046877	62046878	chunk0192_151_1	52.8093	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	62046129	62046946	-83091690	-	L1MC4a	LINE	L1	-1305	4841	4031	3
chr8	62102481	62102482	chunk0192_153_1	47.9568	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	62101004	62102544	-83036092	-	HUERS-P3-int	LTR	ERV1	-474	8445	6895	3
chr8	62172577	62172578	chunk0192_155_1	58.96319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	62171714	62175237	-82963399	-	L1PA17	LINE	L1	-3	6163	2600	3
chr8	62222841	62222842	chunk0192_156_1	15.8928	AR_DHT_Control	chr8	62220820	62222945	-82915691	+	L1MA9	LINE	L1	4050	6164	-148	3
chr8	62529695	62529696	chunk0192_168_1	81.8008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	62529408	62529757	-82608879	+	MLT1A0	LTR	ERVL-MaLR	30	365	0	3
chr8	62729189	62729190	chunk0192_173_1	39.0255	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	62729018	62729586	-82409050	+	L1MC	LINE	L1	5167	5721	-612	3
chr8	62770826	62770827	chunk0192_174_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	62770672	62771145	-82367491	+	L1M4a1	LINE	L1	687	1141	-1438	3
chr8	62774739	62774740	chunk0192_175_1	10.2385	AR_DHT_Control	chr8	62773872	62779565	-82359071	-	L1MA3	LINE	L1	-1463	6102	254	3
chr8	62861062	62861063	chunk0192_177_1	16.83226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	62860992	62861159	-82277477	+	MER117	DNA	hAT-Charlie	8	180	-17	3
chr8	63244551	63244552	chunk0192_188_1	4.71246	AR_DHT_Control	chr8	63243499	63244869	-81893767	+	L2a	LINE	L2	1862	3423	-3	3
chr8	63329462	63329463	chunk0192_190_1	8.24382	AR_DHT_Control	chr8	63329420	63329681	-81808955	+	MER124	DNA?	DNA?	73	349	-48	3
chr8	63593849	63593850	chunk0192_191_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	63591351	63594473	-81544163	-	L1M3c	LINE	L1	-3169	4390	1461	3
chr8	63858801	63858802	chunk0192_194_1	20.4916	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	63858172	63859423	-81279213	-	L1MD1	LINE	L1	0	6633	5387	3
chr8	64311037	64311038	chunk0192_198_1	12.8792	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	64310213	64311416	-80827220	+	L1PB4	LINE	L1	4872	6155	-1	3
chr8	64327680	64327681	chunk0192_201_1	37.39002	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	64326380	64328109	-80810527	-	L2a	LINE	L2	0	3426	185	3
chr8	64413918	64413919	chunk0192_203_1	17.80444	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	64413801	64414188	-80724448	+	L2c	LINE	L2	3024	3385	-2	3
chr8	64506090	64506091	chunk0192_204_1	9.01771	AR_DHT_Control	chr8	64506041	64506354	-80632282	+	L1ME2	LINE	L1	1099	1434	-4966	3
chr8	65246606	65246607	chunk0192_219_1	9.56998	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	65246396	65247110	-79891526	-	HAL1b	LINE	L1	-1687	734	15	3
chr8	65305399	65305400	chunk0192_221_1	132.0625	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	65305360	65305474	-79833162	-	L2a	LINE	L2	0	3426	3304	3
chr8	65335033	65335034	chunk0192_225_1	5.30168	AR_DHT_Control	chr8	65334968	65335146	-79803490	-	L2c	LINE	L2	-5	3382	3188	3
chr8	65395629	65395630	chunk0192_227_1	106.8649	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	65395603	65396580	-79742056	-	L2a	LINE	L2	-56	3370	2282	3
chr8	65419681	65419682	chunk0192_230_1	35.83121	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	65419651	65419937	-79718699	-	L2c	LINE	L2	-52	3335	3075	3
chr8	65552664	65552665	chunk0192_238_1	15.127	AR_DHT_Control	chr8	65551771	65552897	-79585739	-	L1MC1	LINE	L1	-1	6332	5166	3
chr8	65556695	65556696	chunk0192_239_1	8.2993	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	65556665	65556794	-79581842	+	L2c	LINE	L2	3196	3329	-58	3
chr8	65586363	65586364	chunk0192_242_1	7.51711	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	65586233	65586471	-79552165	+	LTR40a	LTR	ERVL	265	518	-1	3
chr8	65653091	65653092	chunk0192_244_1	34.55455	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	65653023	65653229	-79485407	+	MER113A	DNA	hAT-Charlie	44	221	-93	3
chr8	65758836	65758837	chunk0192_250_1	18.36285	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	65757916	65759109	-79379527	-	MER21-int	LTR	ERVL	-249	3942	2719	3
chr8	65808070	65808071	chunk0192_253_1	46.8419	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	65807994	65808119	-79330517	+	MER63A	DNA	hAT-Blackjack	2	127	-83	3
chr8	65928628	65928629	chunk0192_260_1	14.0461	AR_DHT_Control	chr8	65927675	65928880	-79209756	-	Tigger3b	DNA	TcMar-Tigger	-18	1213	39	3
chr8	66091182	66091183	chunk0192_272_1	43.52957	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	66091099	66091448	-79047188	-	L2b	LINE	L2	-6	3369	3050	3
chr8	66171037	66171038	chunk0192_277_1	32.86124	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	66171021	66171082	-78967554	+	Tigger3d	DNA	TcMar-Tigger	222	280	-41	3
chr8	66317290	66317291	chunk0192_281_1	11.1716	AR_DHT_Control	chr8	66317061	66317483	-78821153	+	L1MD1	LINE	L1	5596	6036	-206	3
chr8	66546505	66546506	chunk0192_293_1	53.8148	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	66546494	66546592	-78592044	+	MER94	DNA	hAT-Blackjack	38	134	0	3
chr8	66689932	66689933	chunk0192_298_1	8.27376	AR_DHT_Control	chr8	66689862	66689946	-78448690	+	LTR40c	LTR	ERVL	1	85	-380	3
chr8	66763081	66763082	chunk0192_302_1	20.4438	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	66762539	66763884	-78374752	-	L1MC5	LINE	L1	-254	9050	7753	3
chr8	66818301	66818302	chunk0192_306_1	37.4645	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	66818270	66818303	-78320333	+	(ACAAA)n	Simple_repeat	Simple_repeat	1	33	0	3
chr8	66820601	66820602	chunk0192_310_1	85.6582	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	66820115	66820671	-78317965	-	L1MB7	LINE	L1	-71	6113	5538	3
chr8	67047807	67047808	chunk0192_316_1	27.0169	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	67047789	67047862	-78090774	-	Tigger15a	DNA	TcMar-Tigger	-344	371	286	3
chr8	67068751	67068752	chunk0192_319_1	11.3974	AR_DHT_Control	chr8	67068663	67069215	-78069421	+	MER90a	LTR	ERV1	1	610	-4	3
chr8	67101234	67101235	chunk0192_324_1	77.27859	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	67100883	67101439	-78037197	-	MER68	LTR	ERVL	0	563	3	3
chr8	67110268	67110269	chunk0192_325_1	5.99997	AR_DHT_Control	chr8	67109647	67110282	-78028354	-	MER61F	LTR	ERV1	0	676	1	3
chr8	67452830	67452831	chunk0192_336_1	5.44741	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	67452541	67453683	-77684953	-	L2a	LINE	L2	-1	3425	2180	3
chr8	67542338	67542339	chunk0192_337_1	29.5645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	67542323	67542526	-77596110	+	Tigger19b	DNA	TcMar-Tigger	135	366	-184	3
chr8	67621001	67621002	chunk0192_339_1	11.2868	AR_DHT_Control	chr8	67620810	67621361	-77517275	+	MER68	LTR	ERVL	1	560	-3	3
chr8	67641188	67641189	chunk0192_340_1	24.5815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	67641155	67641246	-77497390	-	MER58B	DNA	hAT-Charlie	-74	267	174	3
chr8	67729593	67729594	chunk0192_344_1	54.5753	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	67729501	67729631	-77409005	-	L2c	LINE	L2	-92	3334	3221	3
chr8	67737643	67737644	chunk0192_347_1	20.75892	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	67737465	67737718	-77400918	+	L2c	LINE	L2	3133	3386	-1	3
chr8	68189143	68189144	chunk0192_363_1	32.23491	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68189035	68189160	-76949476	+	L1ME3Cz	LINE	L1	805	940	-57	3
chr8	68221621	68221622	chunk0192_365_1	5.14476	AR_DHT_Control	chr8	68221546	68221641	-76916995	-	L2c	LINE	L2	-249	3138	3042	3
chr8	68245966	68245967	chunk0192_366_1	24.841	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68245927	68246224	-76892412	+	MER74A	LTR	ERVL	1	310	-248	3
chr8	68254626	68254627	chunk0192_367_1	60.815	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68254614	68254861	-76883775	-	L2b	LINE	L2	-1	3374	3090	3
chr8	68312092	68312093	chunk0192_369_1	6.48643	AR_DHT_Control	chr8	68311994	68312110	-76826526	-	MER58A	DNA	hAT-Charlie	-49	175	64	3
chr8	68429504	68429505	chunk0192_373_1	6.49378	AR_DHT_Control	chr8	68428647	68429864	-76708772	+	L1ME3B	LINE	L1	4692	5965	-277	3
chr8	68444160	68444161	chunk0192_374_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68443995	68444612	-76694024	-	L1M6	LINE	L1	-5121	1375	758	3
chr8	68466752	68466753	chunk0192_375_1	9.63948	AR_DHT_Control	chr8	68466738	68466765	-76671871	+	(AT)n	Simple_repeat	Simple_repeat	1	27	0	3
chr8	68468246	68468247	chunk0192_376_1	5.8664	AR_DHT_Control	chr8	68468061	68468308	-76670328	-	HAL1	LINE	L1	-2260	247	16	3
chr8	68502827	68502828	chunk0192_378_1	13.81513	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	68502267	68503530	-76635106	+	L1MC5	LINE	L1	8040	9299	-5	3
chr8	68586346	68586347	chunk0192_379_1	7.22694	AR_DHT_Control	chr8	68586315	68586750	-76551886	-	Charlie7	DNA	hAT-Charlie	-2079	533	66	3
chr8	68596810	68596811	chunk0192_380_1	16.4123	AR_DHT_Control	chr8	68596421	68596903	-76541733	-	LTR40a	LTR	ERVL	0	519	6	3
chr8	68712655	68712656	chunk0192_387_1	33.3568	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	68710298	68716318	-76422318	+	L1PB1	LINE	L1	634	6863	-4	3
chr8	68731993	68731994	chunk0192_388_1	241.5539	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68731965	68732059	-76406577	+	Charlie17a	DNA	hAT-Charlie	120	217	0	3
chr8	68887103	68887104	chunk0192_400_1	44.327	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68886265	68887265	-76251371	+	L1ME1	LINE	L1	5130	6164	-15	3
chr8	68903718	68903719	chunk0192_401_1	37.9355	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	68903680	68903890	-76234746	-	MER58A	DNA	hAT-Charlie	0	224	11	3
chr8	69009663	69009664	chunk0192_404_1	25.19978	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	69009530	69009817	-76128819	-	L1M5	LINE	L1	-422	5702	5415	3
chr8	69151158	69151159	chunk0192_412_1	10.3593	AR_DHT_Control	chr8	69150994	69151474	-75987162	-	Tigger10	DNA	TcMar-Tigger	-213	1631	1132	3
chr8	69374723	69374724	chunk0192_414_1	16.11212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	69374187	69374844	-75763792	+	L1M4	LINE	L1	4674	5340	-806	3
chr8	69619784	69619785	chunk0192_427_1	5.20051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	69619682	69620459	-75518177	-	LTR1B	LTR	ERV1	0	824	1	3
chr8	69684912	69684913	chunk0192_434_1	75.9556	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	69684844	69684932	-75453704	+	MER20	DNA	hAT-Charlie	140	219	0	3
chr8	69719943	69719944	chunk0192_437_1	29.86333	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	69719455	69719984	-75418652	+	HERV1_LTRd	LTR	ERV1	1	535	0	3
chr8	69766231	69766232	chunk0192_440_1	7.73888	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	69766041	69766869	-75371767	+	L2a	LINE	L2	2579	3369	-57	3
chr8	69791948	69791949	chunk0192_442_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	69791912	69791956	-75346680	+	(AGTCAA)n	Simple_repeat	Simple_repeat	1	46	0	3
chr8	69951428	69951429	chunk0192_445_1	12.6608	AR_DHT_Control	chr8	69951328	69951715	-75186921	+	MER57B1	LTR	ERV1	1	393	-8	3
chr8	70123160	70123161	chunk0192_447_1	6.58498	AR_DHT_Control	chr8	70123065	70123248	-75015388	+	Tigger19a	DNA	TcMar-Tigger	42	261	-62	3
chr8	70128180	70128181	chunk0192_448_1	14.66298	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	70127645	70128241	-75010395	+	Tigger17a	DNA	TcMar-Tigger	3	654	0	3
chr8	70411372	70411373	chunk0193_2_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	70411092	70411485	-74727151	+	L1ME3A	LINE	L1	3957	4366	-1780	3
chr8	70469379	70469380	chunk0193_4_1	11.2788	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	70469378	70469533	-74669103	-	MIRb	SINE	MIR	-78	190	40	3
chr8	70478669	70478670	chunk0193_6_1	58.13667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	70478633	70478839	-74659797	+	MER58A	DNA	hAT-Charlie	1	213	-11	3
chr8	70492284	70492285	chunk0193_10_1	5.69781	AR_DHT_Control	chr8	70492167	70492486	-74646150	-	L1M5	LINE	L1	-1054	5092	4764	3
chr8	70493408	70493409	chunk0193_11_1	17.3852	AR_DHT_Control	chr8	70493333	70493568	-74645068	+	ERVL-int	LTR	ERVL	1692	1923	-3834	3
chr8	70571495	70571496	chunk0193_13_1	36.9332	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	70571429	70571524	-74567112	+	AluJr	SINE	Alu	17	111	-201	3
chr8	70631300	70631301	chunk0193_19_1	9.21264	AR_DHT_Control	chr8	70630409	70632028	-74506608	-	L1PA6	LINE	L1	-4559	1625	1	3
chr8	70803964	70803965	chunk0193_23_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	70802235	70804333	-74334303	-	L1PA15	LINE	L1	-3758	2915	769	3
chr8	70844606	70844607	chunk0193_24_1	8.7059	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	70843444	70848619	-74290017	+	L1M2	LINE	L1	720	5737	-1825	3
chr8	71054053	71054054	chunk0193_28_1	5.59693	AR_DHT_Control	chr8	71053708	71054212	-74084424	+	MLT1H1	LTR	ERVL-MaLR	12	555	0	3
chr8	71341655	71341656	chunk0193_36_1	96.808	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	71341332	71341670	-73796966	+	Kanga2_a	DNA	TcMar-Tc2	464	861	-27	3
chr8	71370406	71370407	chunk0193_38_1	5.48709	AR_DHT_Control	chr8	71370345	71370452	-73768184	-	L2a	LINE	L2	-2	3424	3311	3
chr8	71658775	71658776	chunk0193_44_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	71658728	71659127	-73479509	-	MLT1K	LTR	ERVL-MaLR	-172	423	1	3
chr8	71987160	71987161	chunk0193_46_1	7.48058	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	71987140	71987405	-73151231	+	L1ME3G	LINE	L1	95	356	-568	3
chr8	72476073	72476074	chunk0193_57_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	72475971	72476264	-72662372	+	L1PA17	LINE	L1	854	1138	-6011	3
chr8	73148129	73148130	chunk0193_72_1	24.98468	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	73148026	73148554	-71990082	-	L2c	LINE	L2	0	3387	2751	3
chr8	73165022	73165023	chunk0193_74_1	45.2688	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	73164699	73165123	-71973513	+	MER113	DNA	hAT-Charlie	113	520	-1	3
chr8	73360285	73360286	chunk0193_81_1	14.50364	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	73360128	73360679	-71777957	-	L1MC5a	LINE	L1	-17	2760	2167	3
chr8	73575361	73575362	chunk0193_85_1	20.2804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	73575146	73575628	-71563008	+	L1ME4b	LINE	L1	41	540	-352	3
chr8	73606348	73606349	chunk0193_87_1	5.44741	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	73605918	73607164	-71531472	+	L1ME1	LINE	L1	4845	6161	-3	3
chr8	73607201	73607202	chunk0193_89_1	24.97384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	73607176	73607428	-71531208	+	L1ME3E	LINE	L1	5945	6215	-27	3
chr8	73614687	73614688	chunk0193_92_1	27.55309	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	73614614	73615131	-71523505	-	Tigger15a	DNA	TcMar-Tigger	-174	541	4	3
chr8	73635133	73635134	chunk0193_97_1	16.8555	AR_DHT_Control	chr8	73635041	73635184	-71503452	+	L1ME4b	LINE	L1	428	569	-428	3
chr8	73668680	73668681	chunk0193_99_1	7.48244	AR_DHT_Control	chr8	73668394	73669075	-71469561	+	LTR83	LTR	ERVL	9	761	-19	3
chr8	73736417	73736418	chunk0193_102_1	12.46432	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	73736301	73736520	-71402116	-	L2c	LINE	L2	0	3387	3181	3
chr8	73965600	73965601	chunk0193_108_1	7.21036	AR_DHT_Control	chr8	73965382	73965621	-71173015	+	L1ME2z	LINE	L1	5744	6006	-156	3
chr8	74230865	74230866	chunk0193_118_1	56.088	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	74230791	74230929	-70907707	-	MIRb	SINE	MIR	-2	266	118	3
chr8	74250856	74250857	chunk0193_123_1	50.77201	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	74250747	74251473	-70887163	-	MamRep605	LTR?	LTR?	-137	712	3	3
chr8	74280970	74280971	chunk0193_125_1	40.5453	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	74280820	74281061	-70857575	-	MIRb	SINE	MIR	-14	254	3	3
chr8	74416377	74416378	chunk0193_134_1	7.40938	AR_DHT_Control	chr8	74415344	74416902	-70721734	+	L1ME1	LINE	L1	2	1643	-5220	3
chr8	74418619	74418620	chunk0193_135_1	50.0184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	74417790	74419492	-70719144	+	L1ME1	LINE	L1	4949	6693	-202	3
chr8	74497779	74497780	chunk0193_140_1	21.7689	AR_DHT_Control	chr8	74497358	74497826	-70640810	-	L1MA8	LINE	L1	-18	6273	5776	3
chr8	74512427	74512428	chunk0193_141_1	12.0293	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	74512372	74512493	-70626143	+	Tigger19a	DNA	TcMar-Tigger	111	246	-77	3
chr8	74536805	74536806	chunk0193_143_1	12.5821	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	74536104	74537445	-70601191	-	L1PA11	LINE	L1	-17	6342	4992	3
chr8	74569839	74569840	chunk0193_148_1	40.2486	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	74569712	74570006	-70568630	+	LTR24C	LTR	ERV1	292	635	0	3
chr8	74687502	74687503	chunk0193_154_1	13.13743	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	74687034	74688009	-70450627	+	L1MA10	LINE	L1	5329	6331	-3	3
chr8	74721281	74721282	chunk0193_159_1	33.51696	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	74721224	74721317	-70417319	-	MLT1J	LTR	ERVL-MaLR	-313	199	94	3
chr8	74735220	74735221	chunk0193_161_1	8.32058	AR_DHT_Control	chr8	74735023	74735230	-70403406	+	MIR	SINE	MIR	53	252	-10	3
chr8	74740935	74740936	chunk0193_163_1	55.0209	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	74740932	74742094	-70396542	-	Tigger17c	DNA	TcMar-Tigger	-7	1181	1	3
chr8	74741792	74741793	chunk0193_164_1	18.4715	AR_DHT_Control	chr8	74740932	74742094	-70396542	-	Tigger17c	DNA	TcMar-Tigger	-7	1181	1	3
chr8	74785717	74785718	chunk0193_171_1	55.6661	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	74785592	74785772	-70352864	-	MIRb	SINE	MIR	-20	248	61	3
chr8	74938378	74938379	chunk0193_178_1	9.87004	AR_DHT_Control	chr8	74936501	74938716	-70199920	-	L1MA2	LINE	L1	-1554	5044	2849	3
chr8	75179049	75179050	chunk0193_184_1	6.83133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	75178955	75180274	-69958362	+	L1PA16	LINE	L1	736	2044	-4809	3
chr8	75557603	75557604	chunk0193_191_1	5.64811	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	75557337	75557641	-69580995	+	AluSx1	SINE	Alu	1	307	-5	3
chr8	75594856	75594857	chunk0193_192_1	9.21264	AR_DHT_Control	chr8	75594781	75594864	-69543772	-	L1M3de	LINE	L1	-6291	362	278	3
chr8	75785246	75785247	chunk0193_196_1	6.01382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	75783597	75785319	-69353317	-	MER52A	LTR	ERV1	0	1755	1	3
chr8	75833920	75833921	chunk0193_198_1	13.6122	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	75833878	75834995	-69303641	+	L1MC5	LINE	L1	7352	8509	-795	3
chr8	75924009	75924010	chunk0193_201_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	75923709	75927379	-69211257	+	L1PA10	LINE	L1	185	3820	-2641	3
chr8	76083450	76083451	chunk0193_206_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	76082490	76084024	-69054612	-	MLT1A1-int	LTR	ERVL-MaLR	-5	1646	195	3
chr8	76116839	76116840	chunk0193_207_1	12.2728	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	76116773	76117956	-69020680	-	Tigger3b	DNA	TcMar-Tigger	-3	1228	2	3
chr8	76255195	76255196	chunk0193_209_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	76254406	76258433	-68880203	+	L1MA4A	LINE	L1	718	4754	-2808	3
chr8	76266610	76266611	chunk0193_210_1	8.59495	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	76266454	76266614	-68872022	+	MIRb	SINE	MIR	22	189	-79	3
chr8	76314873	76314874	chunk0193_212_1	57.3497	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	76314862	76314896	-68823740	+	(GT)n	Simple_repeat	Simple_repeat	1	34	0	3
chr8	76373199	76373200	chunk0193_215_1	67.5391	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	76373137	76373280	-68765356	+	L1M5	LINE	L1	5672	5820	-304	3
chr8	76513493	76513494	chunk0193_222_1	16.77332	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	76513433	76513843	-68624793	-	L2a	LINE	L2	-5	3421	2988	3
chr8	76605474	76605475	chunk0193_225_1	17.72039	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	76605407	76606616	-68532020	-	L2a	LINE	L2	-1	3425	2136	3
chr8	76650121	76650122	chunk0193_233_1	31.27208	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	76650060	76650399	-68488237	-	Tigger3a	DNA	TcMar-Tigger	-3	345	1	3
chr8	76878940	76878941	chunk0193_244_1	13.91664	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	76878755	76879087	-68259549	-	MLT2C1	LTR	ERVL	-59	338	1	3
chr8	76901342	76901343	chunk0193_248_1	8.58634	AR_DHT_Control	chr8	76896098	76902231	-68236405	-	L1PA6	LINE	L1	0	6327	176	3
chr8	76972151	76972152	chunk0193_259_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	76971417	76973148	-68165488	+	L1PA15-16	LINE	L1	9	1652	-5201	3
chr8	76986740	76986741	chunk0193_262_1	96.4734	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	76986641	76986965	-68151671	+	L2c	LINE	L2	3051	3387	0	3
chr8	77094667	77094668	chunk0193_267_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77094436	77094884	-68043752	-	L1ME4a	LINE	L1	-57	6067	5613	3
chr8	77156627	77156628	chunk0193_268_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77156598	77156782	-67981854	-	L1MEd	LINE	L1	-5484	1619	1382	3
chr8	77282618	77282619	chunk0193_274_1	6.48643	AR_DHT_Control	chr8	77282507	77282824	-67855812	+	MLT2B4	LTR	ERVL	5	287	-269	3
chr8	77550528	77550529	chunk0193_288_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	77544975	77551749	-67586887	-	L1PA16	LINE	L1	-5	6864	4	3
chr8	77663747	77663748	chunk0193_294_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77662913	77664589	-67474047	+	L1MCb	LINE	L1	85	1994	-4837	3
chr8	77814974	77814975	chunk0193_297_1	8.27403	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77814193	77815847	-67322789	+	L1PB4	LINE	L1	4478	6155	-1	3
chr8	77839050	77839051	chunk0193_298_1	6.6833	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77838241	77839530	-67299106	-	L1ME2z	LINE	L1	-3	6441	5022	3
chr8	77998555	77998556	chunk0193_302_1	15.44024	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	77996384	77998779	-67139857	+	L1MC1	LINE	L1	3550	5971	-362	3
chr8	78289100	78289101	chunk0193_312_1	10.2986	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	78289065	78289180	-66849456	+	(TA)n	Simple_repeat	Simple_repeat	1	125	0	3
chr8	78544667	78544668	chunk0193_316_1	24.2892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	78544656	78544707	-66593929	-	MER102c	DNA	hAT-Charlie	0	331	281	3
chr8	78705406	78705407	chunk0193_322_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	78704409	78706703	-66431933	-	L1PA13	LINE	L1	-4331	3832	65	3
chr8	78876673	78876674	chunk0193_325_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	78874061	78877135	-66261501	-	L1PA8A	LINE	L1	-2467	5098	450	3
chr8	78918119	78918120	chunk0193_326_1	29.49473	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	78917990	78919096	-66219540	-	L1MA2	LINE	L1	-523	5782	4668	3
chr8	78990077	78990078	chunk0193_329_1	16.51226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	78989966	78990194	-66148442	+	L2c	LINE	L2	3042	3282	-105	3
chr8	79096672	79096673	chunk0193_330_1	105.15883	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	79096631	79096720	-66041916	+	LFSINE_Vert	SINE	tRNA	362	446	-13	3
chr8	79204850	79204851	chunk0193_331_1	18.2612	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	79204630	79204949	-65933687	+	HAL1M8	LINE	L1	514	805	-2186	3
chr8	79311048	79311049	chunk0193_334_1	14.63333	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	79310903	79311215	-65827421	-	L2c	LINE	L2	-2	3424	3053	3
chr8	79356370	79356371	chunk0193_336_1	155.2887	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	79356320	79356726	-65781910	+	L1ME3A	LINE	L1	5707	6160	-13	3
chr8	79443476	79443477	chunk0193_342_1	147.80948	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	79443171	79443780	-65694856	-	L1M4	LINE	L1	-386	5793	5132	3
chr8	79454755	79454756	chunk0193_345_1	42.969	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	79454601	79454942	-65683694	+	Tigger3c	DNA	TcMar-Tigger	232	589	-13	3
chr8	79793806	79793807	chunk0193_348_1	9.21264	AR_DHT_Control	chr8	79793613	79793843	-65344793	+	Tigger7	DNA	TcMar-Tigger	4	241	-2250	3
chr8	79900810	79900811	chunk0193_354_1	40.6532	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	79900804	79901117	-65237519	-	MER65B	LTR	ERV1	-7	524	227	3
chr8	79913015	79913016	chunk0193_357_1	64.6565	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	79913006	79913452	-65225184	+	L1MB4	LINE	L1	5687	6155	-25	3
chr8	79914520	79914521	chunk0193_359_1	12.0825	AR_DHT_Control	chr8	79914191	79914598	-65224038	+	LTR16B1	LTR	ERVL	41	480	0	3
chr8	79951280	79951281	chunk0193_363_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	79951280	79951529	-65187107	+	MER45C	DNA	hAT-Tip100	368	633	-320	3
chr8	80122795	80122796	chunk0193_377_1	172.4896	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	80122228	80122808	-65015828	+	MER51D	LTR	ERV1	1	657	0	3
chr8	80146806	80146807	chunk0193_379_1	6.8196	AR_DHT_Control	chr8	80146587	80146830	-64991806	+	L1ME3G	LINE	L1	367	626	-298	3
chr8	80436089	80436090	chunk0193_393_1	11.8978	AR_DHT_Control	chr8	80435943	80436252	-64702384	+	L2c	LINE	L2	2840	3168	-219	3
chr8	80487418	80487419	chunk0193_395_1	7.91873	AR_DHT_Control	chr8	80487370	80487475	-64651161	+	(GGC)n	Simple_repeat	Simple_repeat	1	100	0	3
chr8	80502859	80502860	chunk0193_396_1	17.3029	AR_DHT_Control	chr8	80502698	80502865	-64635771	-	MER58B	DNA	hAT-Charlie	0	341	179	3
chr8	80581786	80581787	chunk0193_406_1	60.8924	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	80581507	80582022	-64556614	-	MLT1H	LTR	ERVL-MaLR	0	549	1	3
chr8	80900448	80900449	chunk0193_427_1	5.28628	AR_DHT_Control	chr8	80899609	80900806	-64237830	+	L1MB5	LINE	L1	1	1307	-6210	3
chr8	80908699	80908700	chunk0193_428_1	28.02899	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	80908545	80909441	-64229195	-	L2c	LINE	L2	-51	3336	2337	3
chr8	80941249	80941250	chunk0193_431_1	57.3202	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	80941147	80941603	-64197033	-	L2a	LINE	L2	0	3426	2946	3
chr8	81010793	81010794	chunk0193_436_1	9.56998	AR_DHT_Control	chr8	81010778	81011204	-64127432	+	L2a	LINE	L2	2920	3377	-49	3
chr8	81099737	81099738	chunk0193_441_1	6.33125	AR_DHT_Control	chr8	81099691	81099898	-64038738	+	L1MB8	LINE	L1	5966	6178	0	3
chr8	81104493	81104494	chunk0193_442_1	31.90595	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81104371	81104710	-64033926	+	L2b	LINE	L2	2246	2588	-831	3
chr8	81123503	81123504	chunk0193_448_1	196.5961	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	81123493	81123639	-64014997	-	L2b	LINE	L2	-8	3367	3230	3
chr8	81161314	81161315	chunk0193_450_1	5.81334	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	81160843	81161446	-63977190	-	L2a	LINE	L2	-56	3370	2729	3
chr8	81322530	81322531	chunk0193_458_1	279.6401	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	81322296	81322930	-63815706	-	MER67C	LTR	ERV1	0	711	52	3
chr8	81368278	81368279	chunk0194_5_1	108.46067	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	81368112	81368416	-63770220	-	AluJb	SINE	Alu	-12	300	1	3
chr8	81400070	81400071	chunk0194_7_1	9.82028	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81399927	81400077	-63738559	+	MIR3	SINE	MIR	8	160	-48	3
chr8	81508663	81508664	chunk0194_11_1	7.43227	AR_DHT_Control	chr8	81507966	81510106	-63628530	+	L1MC1	LINE	L1	4135	6333	0	3
chr8	81552323	81552324	chunk0194_16_1	6.80366	AR_DHT_Control	chr8	81551901	81552643	-63585993	-	L2b	LINE	L2	0	3375	2622	3
chr8	81573925	81573926	chunk0194_17_1	34.1222	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81571957	81575773	-63562863	-	L1PB1	LINE	L1	0	6151	2330	3
chr8	81591407	81591408	chunk0194_18_1	67.65104	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	81591365	81591542	-63547094	-	MIRb	SINE	MIR	0	268	41	3
chr8	81622607	81622608	chunk0194_23_1	8.02791	AR_DHT_Control	chr8	81622585	81622865	-63515771	+	L1ME4b	LINE	L1	634	888	-4	3
chr8	81654124	81654125	chunk0194_26_1	9.68843	AR_DHT_Control	chr8	81653357	81654833	-63483803	-	L1M5	LINE	L1	-395	5767	4188	3
chr8	81775526	81775527	chunk0194_31_1	109.6486	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81775348	81776407	-63362229	-	L1PA14	LINE	L1	-8	6153	5098	3
chr8	81776332	81776333	chunk0194_33_1	7.33732	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81775348	81776407	-63362229	-	L1PA14	LINE	L1	-8	6153	5098	3
chr8	81813291	81813292	chunk0194_35_1	68.8345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	81813223	81814677	-63323959	+	L1MB7	LINE	L1	5243	6682	0	3
chr8	81838155	81838156	chunk0194_38_1	25.91204	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	81838033	81839208	-63299428	+	L1ME3A	LINE	L1	4267	5606	-567	3
chr8	81940048	81940049	chunk0194_43_1	17.09173	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	81939905	81940205	-63198431	+	Charlie9	DNA	hAT-Charlie	2251	2570	-187	3
chr8	81990868	81990869	chunk0194_45_1	10.5893	AR_DHT_Control	chr8	81985084	81991244	-63147392	-	L1PA6	LINE	L1	0	6327	174	3
chr8	81991073	81991074	chunk0194_46_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	81985084	81991244	-63147392	-	L1PA6	LINE	L1	0	6327	174	3
chr8	82031959	82031960	chunk0194_47_1	36.9606	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	82031474	82032240	-63106396	-	L1MA9	LINE	L1	-715	5597	4834	3
chr8	82130754	82130755	chunk0194_53_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	82129420	82132379	-63006257	+	L1PB1	LINE	L1	1	3096	-3771	3
chr8	82148138	82148139	chunk0194_54_1	8.53045	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	82148099	82148143	-62990493	+	A-rich	Low_complexity	Low_complexity	1	44	0	3
chr8	82273316	82273317	chunk0194_58_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	82272961	82274495	-62864141	+	L1MA1	LINE	L1	10	1763	-5802	3
chr8	82397111	82397112	chunk0194_62_1	76.3981	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	82396959	82397382	-62741254	-	L1MEd	LINE	L1	-3299	2847	2427	3
chr8	82619427	82619428	chunk0194_72_1	9.56998	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	82619350	82619867	-62518769	+	L2a	LINE	L2	2729	3316	-110	3
chr8	82649862	82649863	chunk0194_74_1	8.27376	AR_DHT_Control	chr8	82646583	82650486	-62488150	+	L1MA3	LINE	L1	2415	6303	-2	3
chr8	82662983	82662984	chunk0194_75_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	82661112	82663873	-62474763	-	L1PA16	LINE	L1	-3902	2951	2	3
chr8	82756012	82756013	chunk0194_79_1	13.0632	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	82755997	82756031	-62382605	+	(CT)n	Simple_repeat	Simple_repeat	1	34	0	3
chr8	82882391	82882392	chunk0194_82_1	10.3174	AR_DHT_Control	chr8	82882342	82883358	-62255278	+	L1MB4	LINE	L1	837	1878	-5639	3
chr8	82954011	82954012	chunk0194_86_1	22.01831	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	82953684	82954032	-62184604	-	ERVL-B4-int	LTR	ERVL	-3532	2182	1822	3
chr8	82976761	82976762	chunk0194_89_1	78.6414	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	82976457	82977247	-62161389	-	L1MC2	LINE	L1	-327	6017	5186	3
chr8	82982421	82982422	chunk0194_90_1	94.0911	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	82981580	82983154	-62155482	+	L1MC4a	LINE	L1	6201	7876	-6	3
chr8	83314349	83314350	chunk0194_98_1	11.9435	AR_DHT_Control	chr8	83314000	83314447	-61824189	-	MER83	LTR	ERV1	0	448	1	3
chr8	83526444	83526445	chunk0194_103_1	119.5286	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	83526434	83526602	-61612034	+	MLT1J	LTR	ERVL-MaLR	68	234	-278	3
chr8	83563449	83563450	chunk0194_105_1	63.0057	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	83563401	83563753	-61574883	-	L1MD2	LINE	L1	-3578	2959	2595	3
chr8	83570369	83570370	chunk0194_107_1	9.44294	AR_DHT_Control	chr8	83569904	83570967	-61567669	+	L2a	LINE	L2	2225	3426	0	3
chr8	83595207	83595208	chunk0194_108_1	8.27376	AR_DHT_Control	chr8	83595155	83595246	-61543390	+	MIRc	SINE	MIR	19	110	-158	3
chr8	83602354	83602355	chunk0194_109_1	15.5336	AR_DHT_Control	chr8	83601728	83607573	-61531063	+	L1PA6	LINE	L1	182	6327	0	3
chr8	83698350	83698351	chunk0194_110_1	34.0655	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	83697587	83698408	-61440228	+	L1ME3A	LINE	L1	5335	6166	-7	3
chr8	83842841	83842842	chunk0194_113_1	16.27225	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	83842557	83842867	-61295769	+	AluJb	SINE	Alu	1	301	-11	3
chr8	83885171	83885172	chunk0194_115_1	34.8862	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	83884815	83885758	-61252878	-	L1M5	LINE	L1	-1810	4336	3354	3
chr8	83957091	83957092	chunk0194_118_1	40.89835	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	83957063	83957185	-61181451	-	MER94	DNA	hAT-Blackjack	0	134	8	3
chr8	83958726	83958727	chunk0194_119_1	23.85741	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	83958273	83959172	-61179464	+	L1M1	LINE	L1	3775	4706	-1440	3
chr8	83998934	83998935	chunk0194_123_1	9.5124	AR_DHT_Control	chr8	83998438	83999973	-61138663	-	L1PA15-16	LINE	L1	-3924	2939	1466	3
chr8	84062662	84062663	chunk0194_124_1	7.80475	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	84060760	84063093	-61075543	-	L1MA2	LINE	L1	-4212	3353	969	3
chr8	84099235	84099236	chunk0194_125_1	8.60744	AR_DHT_Control	chr8	84098419	84099770	-61038866	-	L1PA10	LINE	L1	-770	5376	4020	3
chr8	84103927	84103928	chunk0194_126_1	20.29024	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	84103906	84104524	-61034112	-	L2a	LINE	L2	-74	3352	2634	3
chr8	84108982	84108983	chunk0194_128_1	51.0672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84108912	84109163	-61029473	+	Tigger12	DNA	TcMar-Tigger	2159	2418	-57	3
chr8	84205778	84205779	chunk0194_129_1	7.53305	AR_DHT_Control	chr8	84205776	84206179	-60932457	-	MLT1B	LTR	ERVL-MaLR	0	390	1	3
chr8	84289199	84289200	chunk0194_130_1	62.5611	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84288881	84289436	-60849200	-	MER67C	LTR	ERV1	0	514	1	3
chr8	84315428	84315429	chunk0194_132_1	4.88212	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84315238	84315574	-60823062	+	L1ME4b	LINE	L1	509	859	-33	3
chr8	84387044	84387045	chunk0194_139_1	5.88709	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84387039	84387168	-60751468	+	MIRb	SINE	MIR	103	240	-28	3
chr8	84471765	84471766	chunk0194_140_1	120.9114	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	84471707	84471895	-60666741	+	MIR	SINE	MIR	71	258	-4	3
chr8	84634030	84634031	chunk0194_151_1	11.757	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84633795	84634041	-60504595	+	MIR	SINE	MIR	2	251	-11	3
chr8	84654711	84654712	chunk0194_152_1	18.98659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	84654336	84655316	-60483320	-	L1MA3	LINE	L1	-45	6260	5296	3
chr8	84830583	84830584	chunk0194_161_1	339.00547	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84830528	84830673	-60307963	+	HAL1	LINE	L1	2025	2171	-336	3
chr8	84846761	84846762	chunk0194_164_1	54.6068	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	84846486	84847070	-60291566	-	L1P4d	LINE	L1	-2469	4446	3797	3
chr8	84848707	84848708	chunk0194_165_1	18.2681	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	84848450	84848824	-60289812	+	L1MB2	LINE	L1	5776	6171	0	3
chr8	84863523	84863524	chunk0194_168_1	44.7254	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	84863486	84863559	-60275077	-	MIRc	SINE	MIR	-69	199	127	3
chr8	84989286	84989287	chunk0194_175_1	13.0632	AR_DHT_Control	chr8	84988598	84989514	-60149122	-	Tigger17c	DNA	TcMar-Tigger	-242	946	1	3
chr8	85079060	85079061	chunk0194_177_1	10.3263	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	85079028	85079624	-60059012	-	L1MD	LINE	L1	-2497	3649	3130	3
chr8	85127918	85127919	chunk0194_179_1	7.86105	AR_DHT_Control	chr8	85127462	85128297	-60010339	-	L1M6	LINE	L1	-5611	885	3	3
chr8	85146693	85146694	chunk0194_180_1	158.7957	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	85146659	85147334	-59991302	+	L1M4a1	LINE	L1	1231	2042	-537	3
chr8	85233429	85233430	chunk0194_189_1	52.4713	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	85233427	85233851	-59904785	-	LTR41B	LTR	ERVL	-1	757	335	3
chr8	85468901	85468902	chunk0194_195_1	8.53045	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	85468851	85468996	-59669640	-	MIR3	SINE	MIR	-1	207	57	3
chr8	85565022	85565023	chunk0194_201_1	5.69226	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	85564865	85565026	-59573610	+	MIR1_Amn	SINE	MIR	25	171	-59	3
chr8	85660220	85660221	chunk0194_202_1	14.6381	Merged_Lncap_AR_Veh	chr8	85660140	85660227	-59478409	-	MLT1F1	LTR	ERVL-MaLR	-482	87	1	3
chr8	85855478	85855479	chunk0194_204_1	14.30162	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	85855065	85855913	-59282723	+	MER6	DNA	TcMar-Tigger	1	862	-3	3
chr8	85876400	85876401	chunk0194_209_1	12.7425	AR_DHT_Control	chr8	85876318	85876479	-59262157	+	L2b	LINE	L2	2977	3158	-217	3
chr8	86165370	86165371	chunk0194_219_1	35.8949	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	86165296	86165501	-58973135	+	L2a	LINE	L2	3213	3426	0	3
chr8	86244139	86244140	chunk0194_225_1	55.7293	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86243953	86244515	-58894121	+	L1MC2	LINE	L1	5972	6521	-321	3
chr8	86263398	86263399	chunk0194_229_1	17.9962	AR_DHT_Control	chr8	86262829	86263770	-58874866	+	MER21C	LTR	ERVL	5	923	-15	3
chr8	86290183	86290184	chunk0194_231_1	154.5815	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86290090	86290252	-58848384	+	L2c	LINE	L2	2972	3154	-233	3
chr8	86308633	86308634	chunk0194_234_1	4.67225	AR_DHT_Control	chr8	86308432	86308929	-58829707	+	LTR40a	LTR	ERVL	5	519	0	3
chr8	86395224	86395225	chunk0194_244_1	24.20629	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86395223	86395401	-58743235	-	MER58A	DNA	hAT-Charlie	-9	215	31	3
chr8	86649697	86649698	chunk0194_255_1	7.15014	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86648788	86650049	-58488587	+	L1PB	LINE	L1	4125	5396	-750	3
chr8	86652958	86652959	chunk0194_257_1	102.5944	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	86651875	86653148	-58485488	-	Tigger3b	DNA	TcMar-Tigger	0	1231	6	3
chr8	86865666	86865667	chunk0194_262_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	86865079	86865794	-58272842	-	LTR1B0	LTR	ERV1	0	742	1	3
chr8	86919405	86919406	chunk0194_263_1	41.3558	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86919254	86919694	-58218942	-	MER57D	LTR	ERV1	0	411	1	3
chr8	86940954	86940955	chunk0194_264_1	11.022	AR_DHT_Control	chr8	86940844	86941072	-58197564	+	Tigger3c	DNA	TcMar-Tigger	366	601	-1	3
chr8	86982237	86982238	chunk0194_265_1	8.24382	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	86981451	86982946	-58155690	-	L1ME1	LINE	L1	-16	6163	4481	3
chr8	86994706	86994707	chunk0194_266_1	7.53305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	86991396	86994843	-58143793	-	L1PA16	LINE	L1	-2878	3605	29	3
chr8	87014363	87014364	chunk0194_267_1	36.4093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	87013649	87015196	-58123440	+	MER4B-int	LTR	ERV1	982	2485	-4113	3
chr8	87017694	87017695	chunk0194_269_1	22.26329	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	87017623	87017961	-58120675	+	MER4B-int	LTR	ERV1	5116	5498	-1260	3
chr8	87154419	87154420	chunk0194_271_1	10.6691	AR_DHT_Control	chr8	87154114	87154475	-57984161	-	L2c	LINE	L2	-19	3368	2993	3
chr8	87166483	87166484	chunk0194_273_1	41.655	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	87166129	87166717	-57971919	+	L2	LINE	L2	2475	3080	-339	3
chr8	87204533	87204534	chunk0194_275_1	17.48432	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	87203585	87204854	-57933782	-	MLT1J1-int	LTR	ERVL-MaLR	0	1387	3	3
chr8	87305788	87305789	chunk0194_279_1	17.67717	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	87304634	87306917	-57831719	+	L1PB1	LINE	L1	3865	6148	-3	3
chr8	87440775	87440776	chunk0194_285_1	6.48643	AR_DHT_Control	chr8	87440184	87443030	-57695606	-	L1MA4	LINE	L1	-2	6298	3415	3
chr8	87494927	87494928	chunk0194_288_1	20.72033	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	87494305	87495814	-57642822	-	L1MC1	LINE	L1	0	6333	4797	3
chr8	87572947	87572948	chunk0194_289_1	14.5898	AR_DHT_Control	chr8	87572794	87573170	-57565466	+	L3	LINE	CR1	3562	3972	-127	3
chr8	87585237	87585238	chunk0194_290_1	76.0199	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	87585124	87585271	-57553365	+	MIR	SINE	MIR	70	212	-50	3
chr8	87664091	87664092	chunk0194_293_1	14.2738	AR_DHT_Control	chr8	87663689	87665372	-57473264	-	HERVL40-int	LTR	ERVL	-861	4669	2998	3
chr8	87877412	87877413	chunk0194_295_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	87877160	87877716	-57260920	+	L1MC1	LINE	L1	5416	5992	-341	3
chr8	87886874	87886875	chunk0194_296_1	5.6425	AR_DHT_Control	chr8	87886592	87887095	-57251541	+	LTR40a	LTR	ERVL	5	519	0	3
chr8	88111005	88111006	chunk0194_308_1	63.0419	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	88110969	88111056	-57027580	-	L2a	LINE	L2	-8	3418	3309	3
chr8	88207465	88207466	chunk0194_310_1	7.08133	AR_DHT_Control	chr8	88206927	88209591	-56929045	+	Tigger2	DNA	TcMar-Tigger	1	2715	-3	3
chr8	88474784	88474785	chunk0194_322_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	88473833	88474948	-56663688	+	L1PA11	LINE	L1	4	1240	-5545	3
chr8	88681226	88681227	chunk0194_325_1	9.38051	AR_DHT_Control	chr8	88681216	88681266	-56457370	+	MIR	SINE	MIR	96	142	-120	3
chr8	88713471	88713472	chunk0194_326_1	37.58064	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	88711591	88714301	-56424335	+	MER34-int	LTR	ERV1	5505	8207	0	3
chr8	88871649	88871650	chunk0194_328_1	50.5032	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	88871516	88872512	-56266124	-	L1MD2	LINE	L1	-5509	1131	27	3
chr8	88897089	88897090	chunk0194_329_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	88895762	88898257	-56240379	+	L1MA1	LINE	L1	58	2330	-4459	3
chr8	88985818	88985819	chunk0194_334_1	8.20681	AR_DHT_Control	chr8	88985589	88986416	-56152220	-	L1PA13	LINE	L1	-5	6158	5300	3
chr8	88986679	88986680	chunk0194_336_1	32.3715	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	88986580	88986702	-56151934	+	MER103C	DNA	hAT-Charlie	120	241	-56	3
chr8	89201416	89201417	chunk0194_347_1	27.1531	AR_DHT_Control	chr8	89201206	89202117	-55936519	+	L2	LINE	L2	1476	2452	-967	3
chr8	89253866	89253867	chunk0194_348_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	89248892	89254569	-55884067	-	L1PA16	LINE	L1	-9	6494	10	3
chr8	89476843	89476844	chunk0194_354_1	68.1055	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	89476726	89477713	-55660923	-	L2a	LINE	L2	0	3426	2393	3
chr8	89666859	89666860	chunk0194_359_1	4.81216	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	89666835	89666977	-55471659	+	MIR3	SINE	MIR	49	202	-6	3
chr8	89892511	89892512	chunk0194_366_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	89892183	89898369	-55240267	+	L1MA3	LINE	L1	8	6230	-1335	3
chr8	90347127	90347128	chunk0194_378_1	7.36432	AR_DHT_Control	chr8	90346920	90348120	-54790516	-	L1MC3	LINE	L1	-1964	5994	4744	3
chr8	90620156	90620157	chunk0194_379_1	5.95444	AR_DHT_Control	chr8	90620041	90620176	-54518460	-	L1M5	LINE	L1	-350	5829	5695	3
chr8	90701381	90701382	chunk0194_383_1	27.54244	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	90701334	90701483	-54437153	-	MER58B	DNA	hAT-Charlie	-18	323	174	3
chr8	90987446	90987447	chunk0194_392_1	8.09329	AR_DHT_Control	chr8	90987378	90987525	-54151111	-	L2b	LINE	L2	-84	3291	3126	3
chr8	91028339	91028340	chunk0194_397_1	17.14071	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	91028323	91028799	-54109837	+	ERVL-E-int	LTR	ERVL	1778	2414	-3343	3
chr8	91060251	91060252	chunk0194_400_1	8.09329	AR_DHT_Control	chr8	91059877	91060332	-54078304	-	MER4C	LTR	ERV1	-1	464	4	3
chr8	91308793	91308794	chunk0194_410_1	17.311	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	91308451	91309111	-53829525	-	L1MC3	LINE	L1	-457	7328	6629	3
chr8	91534564	91534565	chunk0194_412_1	6.48643	AR_DHT_Control	chr8	91534307	91534630	-53604006	+	MamRep605	LTR?	LTR?	34	370	-479	3
chr8	91773472	91773473	chunk0194_415_1	14.8182	AR_DHT_Control	chr8	91773456	91773568	-53365068	+	L2	LINE	L2	2381	2493	-926	3
chr8	92119757	92119758	chunk0194_420_1	20.4289	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	92119688	92120030	-53018606	-	Tigger3a	DNA	TcMar-Tigger	0	348	4	3
chr8	92174289	92174290	chunk0194_421_1	15.74868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	92174224	92175449	-52963187	+	L1MEi	LINE	L1	6	1135	-1077	3
chr8	92481980	92481981	chunk0194_428_1	76.28578	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	92481620	92482172	-52656464	+	L2b	LINE	L2	2616	3256	-170	3
chr8	92486460	92486461	chunk0194_433_1	108.7181	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	92486270	92486640	-52651996	-	LTR40a	LTR	ERVL	-134	385	1	3
chr8	92544649	92544650	chunk0194_442_1	21.49771	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	92544642	92544774	-52593862	-	L1M3	LINE	L1	-1622	4518	4381	3
chr8	92555927	92555928	chunk0194_444_1	79.78027	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	92555722	92556228	-52582408	+	MLT1H	LTR	ERVL-MaLR	13	549	0	3
chr8	92562205	92562206	chunk0194_446_1	86.19383	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	92557034	92562973	-52575663	-	L1PA6	LINE	L1	-209	6118	174	3
chr8	92605729	92605730	chunk0194_450_1	7.97514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92605661	92605779	-52532857	+	MIRb	SINE	MIR	102	229	-39	3
chr8	92678938	92678939	chunk0194_453_1	9.48857	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92678607	92679021	-52459615	+	MLT2D	LTR	ERVL	3	408	-6	3
chr8	92775175	92775176	chunk0195_1_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92775045	92775547	-52363089	+	L1ME4c	LINE	L1	293	611	-219	3
chr8	92895685	92895686	chunk0195_6_1	14.7397	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92895335	92896805	-52241831	+	MSTD-int	LTR	ERVL-MaLR	2	1484	-251	3
chr8	92927784	92927785	chunk0195_7_1	7.74912	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92927073	92928181	-52210455	-	L2	LINE	L2	-2047	1372	268	3
chr8	92992272	92992273	chunk0195_11_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	92992118	92992411	-52146225	+	L1MCc	LINE	L1	493	974	-5449	3
chr8	92999123	92999124	chunk0195_12_1	73.4572	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	92999044	92999148	-52139488	-	L2a	LINE	L2	-16	3410	3252	3
chr8	93007920	93007921	chunk0195_14_1	7.43227	AR_DHT_Control	chr8	93007885	93008308	-52130328	+	L1PA10	LINE	L1	5738	6164	-4	3
chr8	93051267	93051268	chunk0195_15_1	30.3132	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	93051045	93051338	-52087298	-	AluJr	SINE	Alu	-13	299	1	3
chr8	93184961	93184962	chunk0195_28_1	64.4343	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93184807	93185555	-51953081	+	L1MC5a	LINE	L1	7232	8042	0	3
chr8	93203145	93203146	chunk0195_30_1	5.42901	AR_DHT_Control	chr8	93199695	93205863	-51932773	-	L1PA6	LINE	L1	-6	6321	175	3
chr8	93205085	93205086	chunk0195_31_1	47.98563	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93199695	93205863	-51932773	-	L1PA6	LINE	L1	-6	6321	175	3
chr8	93291955	93291956	chunk0195_40_1	9.20019	AR_DHT_Control	chr8	93291784	93292014	-51846622	+	MIRb	SINE	MIR	35	268	0	3
chr8	93496756	93496757	chunk0195_50_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93496587	93496792	-51641844	+	MER63A	DNA	hAT-Blackjack	2	210	0	3
chr8	93588261	93588262	chunk0195_52_1	29.825	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	93588185	93588320	-51550316	-	L2a	LINE	L2	-263	3163	3002	3
chr8	93655682	93655683	chunk0195_54_1	11.022	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93655567	93655757	-51482879	-	L2a	LINE	L2	-42	3384	3186	3
chr8	93667211	93667212	chunk0195_55_1	65.3792	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	93667164	93667604	-51471032	+	SATR2	Satellite	Satellite	1	446	-9	3
chr8	93674430	93674431	chunk0195_58_1	9.68843	AR_DHT_Control	chr8	93674321	93674445	-51464191	-	L2c	LINE	L2	-263	3124	2984	3
chr8	93727075	93727076	chunk0195_60_1	13.19063	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	93726973	93727163	-51411473	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr8	93819699	93819700	chunk0195_64_1	67.3296	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	93819500	93819764	-51318872	-	L2c	LINE	L2	-84	3303	2991	3
chr8	93860406	93860407	chunk0195_66_1	30.53715	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93860378	93860501	-51278135	+	L2b	LINE	L2	3241	3373	-2	3
chr8	93868859	93868860	chunk0195_68_1	9.25776	AR_DHT_Control	chr8	93868825	93868965	-51269671	-	Charlie15b	DNA	hAT-Charlie	-717	344	206	3
chr8	93968945	93968946	chunk0195_72_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	93963827	93969969	-51168667	-	L1PA6	LINE	L1	0	6154	1	3
chr8	93969380	93969381	chunk0195_73_1	21.0751	AR_DHT_Control	chr8	93963827	93969969	-51168667	-	L1PA6	LINE	L1	0	6154	1	3
chr8	94147615	94147616	chunk0195_81_1	14.58753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	94147521	94147708	-50990928	-	Charlie19a	DNA	hAT-Charlie	-96	290	94	3
chr8	94223951	94223952	chunk0195_87_1	4.63947	AR_DHT_Control	chr8	94223945	94224198	-50914438	-	MIRb	SINE	MIR	0	268	16	3
chr8	94226973	94226974	chunk0195_89_1	17.46252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	94226857	94227007	-50911629	-	MIRb	SINE	MIR	-100	168	5	3
chr8	94444519	94444520	chunk0195_99_1	83.60468	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	94444065	94444529	-50694107	+	L1ME3G	LINE	L1	55	596	-328	3
chr8	94502690	94502691	chunk0195_102_1	10.0392	AR_DHT_Control	chr8	94502495	94502793	-50635843	+	L1MC4a	LINE	L1	6608	6896	-986	3
chr8	94557012	94557013	chunk0195_104_1	21.84749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	94556691	94557527	-50581109	-	L1PB1	LINE	L1	-776	6086	5251	3
chr8	94813273	94813274	chunk0195_115_1	16.71084	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	94813175	94813417	-50325219	-	L2c	LINE	L2	0	3387	3149	3
chr8	95020593	95020594	chunk0195_132_1	24.36626	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	95020577	95020633	-50118003	-	MER91A	DNA	hAT-Tip100	-122	74	18	3
chr8	95143569	95143570	chunk0195_144_1	116.3444	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	95143398	95143895	-49994741	-	L2c	LINE	L2	-71	3316	2782	3
chr8	95262919	95262920	chunk0195_148_1	8.09329	AR_DHT_Control	chr8	95262863	95263011	-49875625	+	L1ME3Cz	LINE	L1	446	562	-435	3
chr8	95729945	95729946	chunk0195_162_1	8.79742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	95729547	95729988	-49408648	-	Tigger19b	DNA	TcMar-Tigger	0	550	71	3
chr8	95819828	95819829	chunk0195_164_1	9.38217	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	95819740	95820398	-49318238	-	L1MEg2	LINE	L1	-5452	1000	414	3
chr8	95843723	95843724	chunk0195_166_1	16.54391	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	95843687	95843753	-49294883	-	BLACKJACK	DNA	hAT-Blackjack	0	2969	2904	3
chr8	95869387	95869388	chunk0195_167_1	44.71404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	95868104	95869693	-49268943	-	L1MC3	LINE	L1	-921	6864	5281	3
chr8	95874169	95874170	chunk0195_170_1	12.88824	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	95872341	95878245	-49260391	+	L1PA13	LINE	L1	788	6775	-8	3
chr8	95905857	95905858	chunk0195_171_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	95905722	95907186	-49231450	+	L1ME4b	LINE	L1	70	705	-255	3
chr8	96136345	96136346	chunk0195_173_1	22.58869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	96136082	96136389	-49002247	-	MER2	DNA	TcMar-Tigger	-6	339	6	3
chr8	96169022	96169023	chunk0195_175_1	5.59693	AR_DHT_Control	chr8	96168831	96169027	-48969609	-	MamTip2	DNA	hAT-Tip100	-16	289	104	3
chr8	96225727	96225728	chunk0195_176_1	43.95474	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	96225519	96225794	-48912842	+	L2c	LINE	L2	2932	3217	-170	3
chr8	96291496	96291497	chunk0195_180_1	56.1954	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	96291264	96291905	-48846731	-	L1MC5	LINE	L1	-4	9300	8581	3
chr8	96365558	96365559	chunk0195_182_1	50.83764	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	96365539	96365610	-48773026	+	MIRb	SINE	MIR	187	260	-8	3
chr8	96656728	96656729	chunk0195_190_1	5.24411	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	96656153	96657064	-48481572	-	L1M3b	LINE	L1	-5132	1149	242	3
chr8	96670205	96670206	chunk0195_191_1	4.22747	AR_DHT_Control	chr8	96669804	96670310	-48468326	-	Tigger17a	DNA	TcMar-Tigger	-1	653	129	3
chr8	96964207	96964208	chunk0195_210_1	65.2845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	96964173	96964218	-48174418	+	(AC)n	Simple_repeat	Simple_repeat	1	45	0	3
chr8	97064995	97064996	chunk0195_218_1	20.9941	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	97064820	97065058	-48073578	+	MIRc	SINE	MIR	6	243	-25	3
chr8	97077435	97077436	chunk0195_219_1	6.88185	AR_DHT_Control	chr8	97076816	97077818	-48060818	-	Tigger2b_Pri	DNA	TcMar-Tigger	-1	1067	2	3
chr8	97104563	97104564	chunk0195_221_1	14.24339	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	97104380	97105187	-48033449	-	LTR82A	LTR	ERVL	-2	870	31	3
chr8	97261840	97261841	chunk0195_223_1	18.63556	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	97261635	97262045	-47876591	+	MLT1K	LTR	ERVL-MaLR	4	508	-87	3
chr8	97267545	97267546	chunk0195_226_1	30.4229	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	97267317	97267601	-47871035	-	L2c	LINE	L2	0	3387	3122	3
chr8	97340833	97340834	chunk0195_228_1	17.0863	AR_DHT_Control	chr8	97340734	97341065	-47797571	+	L1PA11	LINE	L1	5825	6173	-1	3
chr8	97390254	97390255	chunk0195_229_1	7.04468	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	97389078	97390336	-47748300	+	Charlie9	DNA	hAT-Charlie	1311	2600	-157	3
chr8	97447778	97447779	chunk0195_231_1	101.92617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	97447547	97447805	-47690831	+	MamRep38	DNA	hAT	5	277	-18	3
chr8	97475652	97475653	chunk0195_234_1	7.48058	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	97475109	97482067	-47656569	+	L1PA16	LINE	L1	6	6869	0	3
chr8	97520648	97520649	chunk0195_237_1	8.6237	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	97520329	97521481	-47617155	+	L1PREC2	LINE	L1	5008	6158	-2	3
chr8	97568247	97568248	chunk0195_241_1	19.83904	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	97568103	97568481	-47570155	-	MER87B	LTR	ERV1	-96	413	38	3
chr8	97652461	97652462	chunk0195_245_1	88.4113	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	97652279	97652571	-47486065	+	L2a	LINE	L2	2995	3315	-111	3
chr8	97733803	97733804	chunk0195_247_1	166.6211	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	97733747	97734058	-47404578	+	L1ME3Cz	LINE	L1	7	322	-675	3
chr8	97765544	97765545	chunk0195_250_1	7.47918	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	97765307	97765566	-47373070	+	L2b	LINE	L2	2911	3170	-205	3
chr8	97931734	97931735	chunk0195_256_1	21.42595	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	97931699	97931988	-47206648	-	AluJr4	SINE	Alu	-9	303	15	3
chr8	97959207	97959208	chunk0195_259_1	11.3519	AR_DHT_Control	chr8	97959148	97959240	-47179396	+	L2a	LINE	L2	2978	3076	-299	3
chr8	98085567	98085568	chunk0195_266_1	4.93619	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	98085462	98085660	-47052976	-	L1ME1	LINE	L1	-403	5776	5588	3
chr8	98091635	98091636	chunk0195_269_1	103.34888	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	98091471	98091790	-47046846	-	MER102c	DNA	hAT-Charlie	0	341	16	3
chr8	98111956	98111957	chunk0195_272_1	45.6087	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	98111795	98112157	-47026479	-	L1ME4b	LINE	L1	-3	889	500	3
chr8	98556358	98556359	chunk0195_288_1	8.46211	AR_DHT_Control	chr8	98555766	98556443	-46582193	+	L1MEd	LINE	L1	81	777	-6309	3
chr8	98591462	98591463	chunk0195_292_1	20.56435	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	98591029	98591485	-46547151	+	MER47B	DNA	TcMar-Tigger	1	418	0	3
chr8	98690599	98690600	chunk0195_297_1	4.63256	AR_DHT_Control	chr8	98689792	98690846	-46447790	+	L1PA17	LINE	L1	4091	5127	-1356	3
chr8	98725957	98725958	chunk0195_298_1	13.5285	AR_DHT_Control	chr8	98725777	98726028	-46412608	-	MIRc	SINE	MIR	-15	253	2	3
chr8	98736041	98736042	chunk0195_302_1	220.9963	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;Merged_Lncap_AR_Veh	chr8	98735944	98736136	-46402500	+	L1M5	LINE	L1	5260	5450	-792	3
chr8	98768213	98768214	chunk0195_304_1	6.9031	AR_DHT_Control	chr8	98768121	98768243	-46370393	-	MIRb	SINE	MIR	-10	258	132	3
chr8	98771356	98771357	chunk0195_305_1	28.428	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	98771012	98771440	-46367196	-	L1MB5	LINE	L1	-11	6163	5653	3
chr8	98783164	98783165	chunk0195_309_1	16.8088	AR_DHT_Control	chr8	98783121	98783310	-46355326	-	Tigger1	DNA	TcMar-Tigger	-1	2417	2226	3
chr8	98899855	98899856	chunk0195_312_1	15.825	AR_DHT_Control	chr8	98899851	98899996	-46238640	+	MIR	SINE	MIR	101	260	-2	3
chr8	98922549	98922550	chunk0195_316_1	25.1576	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	98922507	98922602	-46216034	+	L2a	LINE	L2	3301	3425	-1	3
chr8	98978163	98978164	chunk0195_321_1	6.49378	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	98977633	98978716	-46159920	-	MSTD-int	LTR	ERVL-MaLR	-4	1731	590	3
chr8	99046588	99046589	chunk0195_327_1	26.9708	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99044899	99047677	-46090959	-	L1PB1	LINE	L1	-363	6504	3727	3
chr8	99076432	99076433	chunk0195_329_1	6.04605	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99075568	99077179	-46061457	-	L1M2	LINE	L1	-2679	4526	2884	3
chr8	99107634	99107635	chunk0195_330_1	28.99734	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99107591	99107834	-46030802	-	L1MC5	LINE	L1	-419	5754	5523	3
chr8	99176076	99176077	chunk0195_332_1	12.1886	AR_DHT_Control	chr8	99175753	99176137	-45962499	+	Tigger2	DNA	TcMar-Tigger	264	588	-2130	3
chr8	99190706	99190707	chunk0195_333_1	18.4988	AR_DHT_Control	chr8	99189746	99191314	-45947322	-	L1MEc	LINE	L1	-3276	3043	1337	3
chr8	99217823	99217824	chunk0195_335_1	19.86573	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99217820	99217943	-45920693	+	MER58A	DNA	hAT-Charlie	85	224	0	3
chr8	99281466	99281467	chunk0195_337_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	99281333	99281754	-45856882	+	LTR40b	LTR	ERVL	24	462	0	3
chr8	99392075	99392076	chunk0195_339_1	11.1716	AR_DHT_Control	chr8	99391709	99392168	-45746468	-	LTR40a	LTR	ERVL	0	519	1	3
chr8	99446008	99446009	chunk0195_340_1	32.66354	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99445873	99446088	-45692548	-	MER58A	DNA	hAT-Charlie	0	224	5	3
chr8	99483876	99483877	chunk0195_343_1	11.254	AR_DHT_Control	chr8	99483807	99483939	-45654697	-	MER91C	DNA	hAT-Tip100	0	140	1	3
chr8	99492218	99492219	chunk0195_344_1	18.6213	AR_DHT_Control	chr8	99491203	99493001	-45645635	-	L1P2	LINE	L1	-4362	1822	5	3
chr8	99611544	99611545	chunk0195_350_1	10.1791	AR_DHT_Control	chr8	99611538	99611575	-45527061	+	(AACA)n	Simple_repeat	Simple_repeat	1	39	0	3
chr8	99844905	99844906	chunk0195_358_1	5.18121	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99844793	99845168	-45293468	-	MLT1I-int	LTR	ERVL-MaLR	-986	401	13	3
chr8	99932047	99932048	chunk0195_368_1	36.4671	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	99931835	99932863	-45205773	-	L1M3	LINE	L1	-1690	4450	3403	3
chr8	100073575	100073576	chunk0195_379_1	20.4241	AR_DHT_Control	chr8	100073295	100073727	-45064909	+	MamRTE1	LINE	RTE-BovB	977	1403	-2409	3
chr8	100125426	100125427	chunk0195_382_1	8.62581	AR_DHT_Control	chr8	100125354	100125447	-45013189	-	L2	LINE	L2	-400	3019	2920	3
chr8	100177239	100177240	chunk0195_383_1	40.7656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	100176960	100177748	-44960888	-	Tigger2	DNA	TcMar-Tigger	-1932	786	2	3
chr8	100465915	100465916	chunk0195_402_1	158.4462	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	100465829	100465917	-44672719	+	MamTip2	DNA	hAT-Tip100	111	212	-93	3
chr8	100468383	100468384	chunk0195_405_1	9.13189	AR_DHT_Control	chr8	100468359	100468473	-44670163	+	L2a	LINE	L2	3303	3423	-3	3
chr8	100663051	100663052	chunk0195_414_1	78.84321	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	100662939	100663274	-44475362	+	L1PA17	LINE	L1	5814	6164	-2	3
chr8	100781002	100781003	chunk0195_424_1	20.59631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	100780905	100781082	-44357554	-	MER117	DNA	hAT-Charlie	0	197	7	3
chr8	101028512	101028513	chunk0195_433_1	6.29634	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	101028425	101028920	-44109716	+	MLT1F1	LTR	ERVL-MaLR	3	567	-2	3
chr8	101087089	101087090	chunk0195_436_1	16.339	AR_DHT_Control	chr8	101086859	101087236	-44051400	-	MLT1C	LTR	ERVL-MaLR	0	467	89	3
chr8	101187267	101187268	chunk0195_439_1	40.9304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101187013	101187697	-43950939	+	Tigger3b	DNA	TcMar-Tigger	2	731	-500	3
chr8	101202030	101202031	chunk0195_440_1	80.1578	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	101201902	101202158	-43936478	+	L1ME3	LINE	L1	5546	5828	-334	3
chr8	101393622	101393623	chunk0196_1_1	16.36585	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101393501	101393676	-43744960	-	MIR3	SINE	MIR	-3	205	35	3
chr8	101410073	101410074	chunk0196_6_1	5.01479	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	101410034	101410129	-43728507	-	L2c	LINE	L2	-1	3386	3273	3
chr8	101423893	101423894	chunk0196_7_1	141.5768	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	101423838	101423922	-43714714	-	AmnSINE2	SINE	tRNA-Deu	-5	353	265	3
chr8	101512402	101512403	chunk0196_21_1	42.0598	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101511783	101512469	-43626167	-	L1M5	LINE	L1	-1087	5059	4366	3
chr8	101520658	101520659	chunk0196_22_1	16.5697	AR_DHT_Control	chr8	101520620	101520997	-43617639	+	L2b	LINE	L2	2815	3187	-200	3
chr8	101539928	101539929	chunk0196_25_1	14.4331	AR_DHT_Control	chr8	101539728	101540049	-43598587	+	L2a	LINE	L2	3053	3421	-5	3
chr8	101572977	101572978	chunk0196_30_1	75.92694	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	101572842	101573064	-43565572	-	MER58A	DNA	hAT-Charlie	0	224	1	3
chr8	101601948	101601949	chunk0196_35_1	14.8095	AR_DHT_Control	chr8	101601800	101602107	-43536529	-	L1PA8	LINE	L1	-9	6163	5873	3
chr8	101800311	101800312	chunk0196_44_1	14.10094	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101800016	101800753	-43337883	+	L1MEg	LINE	L1	1944	2753	-3784	3
chr8	101829493	101829494	chunk0196_45_1	17.5978	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	101829193	101830278	-43308358	-	Charlie7	DNA	hAT-Charlie	-936	1676	575	3
chr8	102030500	102030501	chunk0196_52_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	102030342	102030599	-43108037	+	L1MC5	LINE	L1	8186	8449	-855	3
chr8	102260254	102260255	chunk0196_62_1	65.47344	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	102260067	102260642	-42877994	+	MER68B	LTR	ERVL	15	613	-87	3
chr8	102417381	102417382	chunk0196_69_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	102417205	102417507	-42721129	-	LTR16C	LTR	ERVL	0	489	180	3
chr8	102480055	102480056	chunk0196_70_1	6.28518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	102480031	102480158	-42658478	+	L4_A_Mam	LINE	RTE-X	3845	3991	-999	3
chr8	102528661	102528662	chunk0196_73_1	17.21473	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	102528541	102528802	-42609834	+	(GTGCTGT)n	Simple_repeat	Simple_repeat	1	268	0	3
chr8	102616956	102616957	chunk0196_80_1	103.26117	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	102616929	102617114	-42521522	-	MER58A	DNA	hAT-Charlie	0	224	5	3
chr8	102917904	102917905	chunk0196_90_1	98.8631	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	102917757	102918270	-42220366	+	L1ME4b	LINE	L1	154	705	-187	3
chr8	103038218	103038219	chunk0196_98_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	103038023	103038473	-42100163	-	MLT1H2	LTR	ERVL-MaLR	0	595	18	3
chr8	103099234	103099235	chunk0196_107_1	7.16019	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	103099133	103099557	-42039079	+	MLT1L	LTR	ERVL-MaLR	73	603	-7	3
chr8	103152218	103152219	chunk0196_109_1	6.13915	AR_DHT_Control	chr8	103151977	103152649	-41985987	+	L2b	LINE	L2	2666	3370	-5	3
chr8	103317091	103317092	chunk0196_113_1	7.47918	AR_DHT_Control	chr8	103316853	103317618	-41821018	-	L2a	LINE	L2	0	3426	2563	3
chr8	103614286	103614287	chunk0196_121_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	103612868	103614627	-41524009	-	L1MA2	LINE	L1	-5773	1792	13	3
chr8	103760797	103760798	chunk0196_123_1	43.8759	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	103760697	103760886	-41377750	+	L2a	LINE	L2	3216	3426	0	3
chr8	103980033	103980034	chunk0196_130_1	179.2147	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	103979516	103981940	-41156696	+	L1MA2	LINE	L1	13	2548	-5017	3
chr8	104025887	104025888	chunk0196_132_1	27.07845	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	104025733	104026076	-41112560	+	Tigger3a	DNA	TcMar-Tigger	3	348	0	3
chr8	104264353	104264354	chunk0196_134_1	9.01771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	104263805	104266210	-40872426	-	L1MEf	LINE	L1	-2091	4055	1471	3
chr8	104278692	104278693	chunk0196_136_1	148.0328	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	104278639	104279041	-40859595	-	LOR1-int	LTR	ERV1	-7707	413	1	3
chr8	104305305	104305306	chunk0196_139_1	5.82105	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	104304812	104305521	-40833115	-	MER50	LTR	ERV1	0	734	1	3
chr8	104503887	104503888	chunk0196_143_1	7.36432	AR_DHT_Control	chr8	104503759	104503899	-40634737	-	L1M5	LINE	L1	-1918	4228	4074	3
chr8	104559967	104559968	chunk0196_145_1	17.02292	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	104559878	104560101	-40578535	-	MIRb	SINE	MIR	-28	240	15	3
chr8	104563367	104563368	chunk0196_146_1	73.5537	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	104563264	104563432	-40575204	-	MIRb	SINE	MIR	-44	224	40	3
chr8	104568763	104568764	chunk0196_148_1	9.5124	AR_DHT_Control	chr8	104567527	104569413	-40569223	+	L1MB7	LINE	L1	4184	6143	-41	3
chr8	104609843	104609844	chunk0196_152_1	9.01771	AR_DHT_Control	chr8	104609712	104614298	-40524338	-	L1PA15	LINE	L1	-816	5857	1050	3
chr8	104639587	104639588	chunk0196_154_1	5.56779	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	104639580	104639755	-40498881	+	MER5A	DNA	hAT-Charlie	13	188	-1	3
chr8	104766364	104766365	chunk0196_157_1	17.68017	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	104765871	104766646	-40371990	+	L1PA15	LINE	L1	5393	6163	-2	3
chr8	105538216	105538217	chunk0196_166_1	16.6442	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	105538188	105538324	-39600312	+	MIRb	SINE	MIR	95	232	-36	3
chr8	105847733	105847734	chunk0196_171_1	63.2755	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	105847278	105848139	-39290497	+	L1M3de	LINE	L1	3	1201	-5452	3
chr8	105865746	105865747	chunk0196_172_1	6.42963	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	105865743	105865859	-39272777	+	L2	LINE	L2	2852	2966	-453	3
chr8	105892244	105892245	chunk0196_174_1	11.5684	AR_DHT_Control	chr8	105891757	105892656	-39245980	+	L1MA6	LINE	L1	5394	6294	-6	3
chr8	105962111	105962112	chunk0196_178_1	51.7546	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	105962096	105962235	-39176401	-	L2a	LINE	L2	-11	3415	3238	3
chr8	105989866	105989867	chunk0196_181_1	59.01807	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	105989695	105990029	-39148607	+	MER67D	LTR	ERV1	1	311	-203	3
chr8	106016990	106016991	chunk0196_183_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106016449	106017448	-39121188	+	L1MEc	LINE	L1	2708	3763	-2556	3
chr8	106103589	106103590	chunk0196_187_1	30.44843	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106103470	106103645	-39034991	-	MLT1J	LTR	ERVL-MaLR	-259	253	71	3
chr8	106186302	106186303	chunk0196_192_1	6.41766	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106186227	106186420	-38952216	+	MIRb	SINE	MIR	31	249	-19	3
chr8	106187269	106187270	chunk0196_193_1	19.91784	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	106187104	106187330	-38951306	-	MER103C	DNA	hAT-Charlie	0	297	67	3
chr8	106208978	106208979	chunk0196_196_1	5.14616	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106208497	106208983	-38929653	+	CR1_Mam	LINE	CR1	679	1189	-1015	3
chr8	106449495	106449496	chunk0196_201_1	18.86306	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	106449451	106449611	-38689025	-	MIR	SINE	MIR	-31	231	71	3
chr8	106583283	106583284	chunk0196_207_1	34.12832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	106583032	106583448	-38555188	-	MamRep1151	LTR?	LTR?	-8	701	283	3
chr8	106755333	106755334	chunk0196_212_1	97.6521	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	106755197	106755361	-38383275	+	L1M5	LINE	L1	5543	5714	-459	3
chr8	107044561	107044562	chunk0196_216_1	6.81252	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	107043320	107045762	-38092874	+	L1PB1	LINE	L1	3725	6150	-1	3
chr8	107509122	107509123	chunk0196_224_1	27.1408	AR_DHT_Control	chr8	107508784	107509246	-37629390	+	L1MB5	LINE	L1	5695	6163	-11	3
chr8	107608359	107608360	chunk0196_227_1	19.99944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	107608331	107608392	-37530244	-	L1MA7	LINE	L1	-35	6256	6196	3
chr8	107922276	107922277	chunk0196_234_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	107921531	107924104	-37214532	+	L1PA13	LINE	L1	3564	6163	0	3
chr8	108225466	108225467	chunk0196_236_1	8.21385	AR_DHT_Control	chr8	108224811	108225978	-36912658	+	Charlie1	DNA	hAT-Charlie	1490	2677	-104	3
chr8	108243127	108243128	chunk0196_238_1	41.48077	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	108242672	108243348	-36895288	+	L1ME3A	LINE	L1	5260	6030	-143	3
chr8	108445242	108445243	chunk0196_242_1	45.0456	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108445191	108445279	-36693357	+	MIRc	SINE	MIR	169	266	-2	3
chr8	108468929	108468930	chunk0196_243_1	10.1214	AR_DHT_Control	chr8	108468830	108469249	-36669387	+	L2c	LINE	L2	2970	3387	0	3
chr8	108517617	108517618	chunk0196_245_1	17.05535	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108517518	108518083	-36620553	-	L1MA10	LINE	L1	-2	6332	5769	3
chr8	108592944	108592945	chunk0196_251_1	48.2243	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108589761	108596218	-36542418	+	L1PA8	LINE	L1	8	6487	0	3
chr8	108735624	108735625	chunk0196_258_1	16.14967	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108735183	108735766	-36402870	-	L1MB8	LINE	L1	0	6178	5600	3
chr8	108772165	108772166	chunk0196_259_1	16.3285	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108772135	108772256	-36366380	-	L3b	LINE	CR1	-337	4895	4772	3
chr8	108798137	108798138	chunk0196_262_1	15.32536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108798085	108798139	-36340497	+	(TTTGG)n	Simple_repeat	Simple_repeat	1	57	0	3
chr8	108805378	108805379	chunk0196_263_1	17.56345	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	108805129	108805536	-36333100	+	LTR54	LTR	ERV1	13	510	0	3
chr8	108946067	108946068	chunk0196_269_1	53.46057	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	108945863	108946114	-36192522	-	L1ME3G	LINE	L1	-5	919	652	3
chr8	109255925	109255926	chunk0196_273_1	8.58456	AR_DHT_Control	chr8	109255596	109255926	-35882710	-	L2b	LINE	L2	-117	3309	2962	3
chr8	109267821	109267822	chunk0196_276_1	66.9808	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	109267636	109267843	-35870793	+	Tigger8	DNA	TcMar-Tigger	382	597	-70	3
chr8	109277038	109277039	chunk0196_278_1	12.9812	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	109277029	109277256	-35861380	-	MIR	SINE	MIR	0	262	2	3
chr8	109312708	109312709	chunk0196_281_1	26.3882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	109312682	109313251	-35825385	+	MER90a	LTR	ERV1	5	614	0	3
chr8	109355327	109355328	chunk0196_283_1	21.99512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	109355293	109355334	-35783302	+	Alu	SINE	Alu	261	301	0	3
chr8	109422563	109422564	chunk0196_284_1	42.9011	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	109422042	109424020	-35714616	-	L1MD2	LINE	L1	-17	6342	4278	3
chr8	109494193	109494194	chunk0196_287_1	19.38691	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	109494193	109494659	-35643977	+	L1MC4a	LINE	L1	5444	5926	-1956	3
chr8	109540047	109540048	chunk0196_289_1	13.96181	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	109540006	109540075	-35598561	+	(TCCGCCC)n	Simple_repeat	Simple_repeat	1	62	0	3
chr8	109581276	109581277	chunk0196_292_1	13.5482	AR_DHT_Control	chr8	109581238	109581463	-35557173	+	MIRc	SINE	MIR	34	263	-5	3
chr8	109785009	109785010	chunk0196_305_1	8.15319	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	109784088	109785716	-35352920	+	L1PA10	LINE	L1	4504	6152	-16	3
chr8	109949975	109949976	chunk0196_307_1	11.40089	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	109949965	109950064	-35188572	+	MLT2B4	LTR	ERVL	1	96	-460	3
chr8	110018791	110018792	chunk0196_309_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	110017697	110018901	-35119735	-	L1M1	LINE	L1	-4788	2778	1560	3
chr8	110629431	110629432	chunk0196_311_1	10.1791	AR_DHT_Control	chr8	110629209	110629769	-34508867	-	LTR75	LTR	ERVL	0	562	1	3
chr8	110651329	110651330	chunk0196_314_1	45.0974	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	110651279	110651582	-34487054	-	L1M5	LINE	L1	-3388	2758	2427	3
chr8	110657300	110657301	chunk0196_315_1	11.1716	AR_DHT_Control	chr8	110655806	110659132	-34479504	+	L1PA17	LINE	L1	2405	5772	-2369	3
chr8	110733890	110733891	chunk0196_317_1	13.65238	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	110733861	110735372	-34403264	-	MER52A	LTR	ERV1	0	1755	1	3
chr8	110763374	110763375	chunk0196_319_1	12.1886	AR_DHT_Control	chr8	110762986	110763657	-34374979	+	L1PREC2	LINE	L1	5481	6160	0	3
chr8	111302048	111302049	chunk0196_323_1	9.21264	AR_DHT_Control	chr8	111302029	111302388	-33836248	-	L1M5	LINE	L1	-1989	4157	3795	3
chr8	112074349	112074350	chunk0196_329_1	6.48643	AR_DHT_Control	chr8	112073527	112075057	-33063579	+	L1M2	LINE	L1	236	1906	-4943	3
chr8	112387884	112387885	chunk0196_330_1	14.0295	AR_DHT_Control	chr8	112387859	112387973	-32750663	-	L2b	LINE	L2	0	3375	3258	3
chr8	112390246	112390247	chunk0196_331_1	14.3224	AR_DHT_Control	chr8	112389931	112390504	-32748132	+	MLT1L	LTR	ERVL-MaLR	4	583	-27	3
chr8	112460141	112460142	chunk0196_333_1	47.05016	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	112459757	112460178	-32678458	+	L2c	LINE	L2	2910	3313	-74	3
chr8	113486475	113486476	chunk0196_335_1	7.74912	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	113485598	113487618	-31651018	-	L1M1	LINE	L1	-5383	2182	14	3
chr8	113871933	113871934	chunk0196_336_1	10.0392	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	113871136	113872327	-31266309	-	L1PA10	LINE	L1	0	6168	4969	3
chr8	113950630	113950631	chunk0196_339_1	31.5974	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	113950209	113950840	-31187796	-	L1MD1	LINE	L1	-7	6626	5984	3
chr8	114081445	114081446	chunk0196_341_1	15.44313	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	114081309	114081559	-31057077	-	Tigger17a	DNA	TcMar-Tigger	-392	262	16	3
chr8	114390891	114390892	chunk0196_346_1	68.9293	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	114390187	114391027	-30747609	-	L1M5	LINE	L1	-2877	3269	2482	3
chr8	114554799	114554800	chunk0196_352_1	28.82532	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	114554418	114554884	-30583752	-	LTR75	LTR	ERVL	-91	471	2	3
chr8	114667645	114667646	chunk0196_355_1	16.67689	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	114667608	114667689	-30470947	-	L1M4a2	LINE	L1	-924	1732	1645	3
chr8	114756620	114756621	chunk0196_358_1	91.87437	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	114756568	114756673	-30381963	+	MIR1_Amn	SINE	MIR	54	148	-82	3
chr8	115164083	115164084	chunk0196_367_1	15.21906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	115164067	115164473	-29974163	+	L1MB3	LINE	L1	299	731	-5598	3
chr8	115273367	115273368	chunk0196_373_1	10.7367	AR_DHT_Control	chr8	115273326	115273554	-29865082	-	L4_A_Mam	LINE	RTE-X	-784	4206	3965	3
chr8	115668739	115668740	chunk0196_385_1	5.33775	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	115668717	115668748	-29469888	+	(AG)n	Simple_repeat	Simple_repeat	1	31	0	3
chr8	115804482	115804483	chunk0196_392_1	138.8444	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	115804414	115804509	-29334127	+	L2a	LINE	L2	3302	3426	0	3
chr8	115858891	115858892	chunk0196_394_1	10.9705	AR_DHT_Control	chr8	115858582	115858979	-29279657	-	L1ME4c	LINE	L1	-378	452	20	3
chr8	115947488	115947489	chunk0196_402_1	9.23066	AR_DHT_Control	chr8	115947304	115947526	-29191110	-	MIRb	SINE	MIR	-34	234	3	3
chr8	116045477	116045478	chunk0196_414_1	5.41601	AR_DHT_Control	chr8	116045332	116045774	-29092862	-	L1PA16	LINE	L1	0	6166	5726	3
chr8	116318972	116318973	chunk0196_428_1	8.7059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	116317511	116319948	-28818688	+	L1PA11	LINE	L1	3745	6169	-5	3
chr8	116451043	116451044	chunk0196_431_1	138.14456	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	116450853	116451190	-28687446	-	MER126	DNA	DNA	-43	406	85	3
chr8	116515168	116515169	chunk0196_436_1	20.4543	AR_DHT_Control	chr8	116515062	116515236	-28623400	+	MIRb	SINE	MIR	7	195	-73	3
chr8	116552442	116552443	chunk0196_440_1	122.8791	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	116552275	116552460	-28586176	+	MIR3	SINE	MIR	18	201	-7	3
chr8	116567526	116567527	chunk0196_443_1	11.4107	AR_DHT_Control	chr8	116567436	116567909	-28570727	+	L2c	LINE	L2	2918	3387	0	3
chr8	116640027	116640028	chunk0196_447_1	53.26851	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	116639833	116640075	-28498561	+	X1_LINE	LINE	CR1	273	530	-115	3
chr8	116675237	116675238	chunk0196_454_1	8.27376	AR_DHT_Control	chr8	116674904	116675342	-28463294	-	Charlie25	DNA	hAT-Charlie	-1589	935	507	3
chr8	116753759	116753760	chunk0197_5_1	67.8087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	116753752	116753824	-28384812	+	L2a	LINE	L2	3347	3424	-2	3
chr8	116825666	116825667	chunk0197_6_1	53.1859	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	116825659	116825857	-28312779	-	MARNA	DNA	TcMar-Mariner	-224	362	172	3
chr8	117281349	117281350	chunk0197_18_1	15.16654	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	117281082	117281932	-27856704	-	L2c	LINE	L2	-1	3386	2448	3
chr8	118168422	118168423	chunk0197_39_1	9.69227	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	118168372	118168440	-26970196	+	LTR33	LTR	ERVL	358	425	-90	3
chr8	118195793	118195794	chunk0197_40_1	5.90945	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	118195714	118195819	-26942817	+	L2b	LINE	L2	3263	3374	-1	3
chr8	118225699	118225700	chunk0197_41_1	4.88663	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	118225647	118225760	-26912876	-	L2b	LINE	L2	-1	3386	3280	3
chr8	118383323	118383324	chunk0197_45_1	5.6503	AR_DHT_Control	chr8	118383163	118383439	-26755197	-	L2b	LINE	L2	-9	3366	3090	3
chr8	118413107	118413108	chunk0197_48_1	17.09794	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118412893	118413273	-26725363	+	MLT1H	LTR	ERVL-MaLR	124	533	-16	3
chr8	118488875	118488876	chunk0197_50_1	17.86978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118488377	118489437	-26649199	-	L1ME3	LINE	L1	-8	6154	5048	3
chr8	118562655	118562656	chunk0197_54_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118562226	118562662	-26575974	-	L2	LINE	L2	-995	2424	1970	3
chr8	118609347	118609348	chunk0197_58_1	137.43897	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	118608870	118609385	-26529251	-	MER6	DNA	TcMar-Tigger	-4	861	367	3
chr8	118691488	118691489	chunk0197_62_1	8.93723	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118690647	118692762	-26445874	-	L1PB3	LINE	L1	-2	6868	4731	3
chr8	118845718	118845719	chunk0197_66_1	7.35485	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118845658	118845943	-26292693	-	L1M7	LINE	L1	-5250	968	677	3
chr8	118862315	118862316	chunk0197_67_1	10.2385	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118862303	118862456	-26276180	+	MER110A	LTR	ERV1	105	298	-170	3
chr8	118863977	118863978	chunk0197_68_1	7.73888	AR_DHT_Control	chr8	118863538	118864207	-26274429	-	L1MC4	LINE	L1	-143	7899	7228	3
chr8	118894358	118894359	chunk0197_71_1	8.5059	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	118893702	118894891	-26243745	-	L1ME4b	LINE	L1	-419	473	1	3
chr8	119010645	119010646	chunk0197_76_1	10.2531	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	119009854	119013872	-26124764	-	L1MC1	LINE	L1	-5	6503	2418	3
chr8	119137715	119137716	chunk0197_83_1	35.9316	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	119137246	119139308	-25999328	-	L1ME2	LINE	L1	-7	6157	3975	3
chr8	119338524	119338525	chunk0197_91_1	6.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	119338487	119338748	-25799888	+	L2c	LINE	L2	1426	1698	-1721	3
chr8	119345535	119345536	chunk0197_92_1	14.1316	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	119345496	119345650	-25792986	-	L2c	LINE	L2	-40	3347	3182	3
chr8	119425844	119425845	chunk0197_94_1	5.69103	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	119425809	119426256	-25712380	-	L2a	LINE	L2	-1	3425	2941	3
chr8	119722072	119722073	chunk0197_102_1	44.56807	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	119721921	119722113	-25416523	-	MIR3	SINE	MIR	-9	199	1	3
chr8	119767874	119767875	chunk0197_106_1	31.64617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	119767206	119767964	-25370672	+	L1PA15-16	LINE	L1	9	720	-6614	3
chr8	119937557	119937558	chunk0197_120_1	91.4387	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	119937506	119937611	-25201025	+	Charlie15b	DNA	hAT-Charlie	684	792	-269	3
chr8	119982876	119982877	chunk0197_126_1	8.62581	AR_DHT_Control	chr8	119982820	119982998	-25155638	-	MLT1J	LTR	ERVL-MaLR	-357	253	1	3
chr8	120010120	120010121	chunk0197_127_1	5.83706	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	120010053	120010211	-25128425	+	MIRb	SINE	MIR	25	194	-74	3
chr8	120202736	120202737	chunk0197_134_1	7.91873	AR_DHT_Control	chr8	120202637	120202745	-24935891	+	MIR	SINE	MIR	134	240	-22	3
chr8	120204621	120204622	chunk0197_136_1	23.92291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	120204102	120204731	-24933905	-	L1MD1	LINE	L1	-2	6240	5596	3
chr8	120397507	120397508	chunk0197_147_1	8.09329	AR_DHT_Control	chr8	120396866	120398920	-24739716	+	L1PA11	LINE	L1	6	2876	-4727	3
chr8	120413304	120413305	chunk0197_149_1	19.19681	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	120413199	120413447	-24725189	-	L2c	LINE	L2	0	3387	3126	3
chr8	120419099	120419100	chunk0197_151_1	34.3213	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	120419068	120419259	-24719377	-	MIR	SINE	MIR	-21	241	37	3
chr8	120431627	120431628	chunk0197_152_1	6.86759	AR_DHT_Control	chr8	120431241	120431675	-24706961	+	L3	LINE	CR1	3164	3668	-431	3
chr8	120435450	120435451	chunk0197_153_1	18.98669	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	120435212	120436032	-24702604	-	L1PA15	LINE	L1	-5	6160	5252	3
chr8	120436593	120436594	chunk0197_154_1	27.1705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	120436145	120436658	-24701978	-	L1MD	LINE	L1	-669	5690	5138	3
chr8	120481265	120481266	chunk0197_158_1	89.55383	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	120480430	120481751	-24656885	+	L1ME1	LINE	L1	4630	6121	-58	3
chr8	120842927	120842928	chunk0197_166_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	120842851	120842969	-24295667	+	L1MEd	LINE	L1	4	136	-6950	3
chr8	120985639	120985640	chunk0197_171_1	7.12934	AR_DHT_Control	chr8	120985511	120985707	-24152929	-	MIRb	SINE	MIR	-32	236	33	3
chr8	121097649	121097650	chunk0197_174_1	10.89222	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	121097558	121097794	-24040842	-	MLT2F	LTR	ERVL	-397	266	8	3
chr8	121151626	121151627	chunk0197_177_1	11.6878	AR_DHT_Control	chr8	121151602	121152024	-23986612	-	MLT1C	LTR	ERVL-MaLR	0	467	6	3
chr8	121319115	121319116	chunk0197_181_1	50.63694	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	121319007	121319249	-23819387	-	MER63D	DNA	hAT-Blackjack	-669	392	175	3
chr8	121322927	121322928	chunk0197_184_1	20.12002	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	121322791	121323041	-23815595	+	L1M5	LINE	L1	5410	5663	-461	3
chr8	121325070	121325071	chunk0197_186_1	127.5251	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	121324943	121325257	-23813379	-	L2c	LINE	L2	-16	3410	3063	3
chr8	121431811	121431812	chunk0197_191_1	35.46925	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	121431805	121431965	-23706671	-	MIRc	SINE	MIR	-13	255	84	3
chr8	121719919	121719920	chunk0197_195_1	6.26854	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	121719048	121720517	-23418119	-	MER52A	LTR	ERV1	0	1755	1	3
chr8	121732558	121732559	chunk0197_196_1	7.5528	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	121731749	121732998	-23405638	-	L1PB3	LINE	L1	-7	6147	4879	3
chr8	122467180	122467181	chunk0197_201_1	4.77556	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	122466148	122469289	-22669347	+	L1PREC2	LINE	L1	11	3166	-3600	3
chr8	122499883	122499884	chunk0197_202_1	7.09019	AR_DHT_Control	chr8	122499461	122500000	-22638636	+	(CA)n	Simple_repeat	Simple_repeat	1	558	0	3
chr8	122587875	122587876	chunk0197_206_1	6.6833	AR_DHT_Control	chr8	122587738	122588134	-22550502	-	Arthur1B	DNA	hAT-Tip100	-723	502	107	3
chr8	122618439	122618440	chunk0197_207_1	64.7683	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	122618381	122618537	-22520099	-	MIR	SINE	MIR	-76	186	28	3
chr8	122654791	122654792	chunk0197_210_1	11.4842	AR_DHT_Control	chr8	122654766	122655160	-22483476	+	HERV16-int	LTR	ERVL	37	434	-4562	3
chr8	122683967	122683968	chunk0197_212_1	21.87545	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	122683589	122684033	-22454603	+	LTR78	LTR	ERV1	855	1300	-4	3
chr8	122708252	122708253	chunk0197_213_1	5.20051	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	122708117	122708574	-22430062	-	L2	LINE	L2	-339	3080	2570	3
chr8	122745918	122745919	chunk0197_217_1	68.25195	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	122745918	122746053	-22392583	+	LTR88a	LTR	Gypsy?	242	377	-439	3
chr8	122875360	122875361	chunk0197_223_1	51.7242	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	122875263	122875428	-22263208	+	MER58C	DNA	hAT-Charlie	45	213	-2	3
chr8	123012232	123012233	chunk0197_225_1	27.01973	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	123012146	123012447	-22126189	+	AluSx3	SINE	Alu	1	299	-12	3
chr8	123038924	123038925	chunk0197_232_1	5.89947	AR_DHT_Control	chr8	123038846	123039675	-22098961	+	L2a	LINE	L2	2371	3185	-241	3
chr8	123074876	123074877	chunk0197_233_1	4.15002	AR_DHT_Control	chr8	123074842	123074885	-22063751	+	L2b	LINE	L2	3318	3361	-14	3
chr8	123107154	123107155	chunk0197_236_1	68.807	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	123106742	123107288	-22031348	-	MER68	LTR	ERVL	0	563	1	3
chr8	123173233	123173234	chunk0197_238_1	8.21385	AR_DHT_Control	chr8	123172979	123173249	-21965387	+	MER45B	DNA	hAT-Tip100	549	821	-219	3
chr8	123202687	123202688	chunk0197_240_1	33.3013	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	123202681	123202789	-21935847	+	MER112	DNA	hAT-Charlie	5	117	-144	3
chr8	123377679	123377680	chunk0197_245_1	6.23615	AR_DHT_Control	chr8	123377420	123377992	-21760644	-	Charlie29a	DNA	hAT-Charlie	0	719	91	3
chr8	123405720	123405721	chunk0197_249_1	563.4974	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	123405580	123405934	-21732702	-	L1ME4b	LINE	L1	-168	724	353	3
chr8	123415358	123415359	chunk0197_252_1	8.2993	AR_DHT_Control	chr8	123415260	123415364	-21723272	-	LTR41B	LTR	ERVL	-654	104	1	3
chr8	123431760	123431761	chunk0197_254_1	8.08101	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	123431643	123431853	-21706783	+	MIRb	SINE	MIR	26	259	-9	3
chr8	123581124	123581125	chunk0197_263_1	13.8894	AR_DHT_Control	chr8	123581002	123581221	-21557415	+	MIRc	SINE	MIR	15	250	-18	3
chr8	123755161	123755162	chunk0197_269_1	3.84181	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	123754133	123755687	-21382949	-	MER52A	LTR	ERV1	0	1755	1	3
chr8	123895098	123895099	chunk0197_273_1	9.08241	AR_DHT_Control	chr8	123894938	123895403	-21243233	+	L1MC4	LINE	L1	7261	7754	-288	3
chr8	124068120	124068121	chunk0197_279_1	6.86932	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	124068096	124068236	-21070400	+	L3	LINE	CR1	3289	3473	-626	3
chr8	124089226	124089227	chunk0197_280_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	124083358	124089521	-21049115	-	L1MA3	LINE	L1	-1127	6438	72	3
chr8	124160753	124160754	chunk0197_284_1	7.14391	AR_DHT_Control	chr8	124160735	124161105	-20977531	-	L2c	LINE	L2	0	3387	3001	3
chr8	124186184	124186185	chunk0197_285_1	7.03714	AR_DHT_Control	chr8	124186116	124187119	-20951517	+	L1MC4	LINE	L1	7051	8042	0	3
chr8	124343199	124343200	chunk0197_290_1	8.46929	AR_DHT_Control	chr8	124343111	124343836	-20794800	+	MER57A-int	LTR	ERV1	3930	4862	-1325	3
chr8	124479766	124479767	chunk0197_298_1	9.1218	AR_DHT_Control	chr8	124479716	124479933	-20658703	+	L1M5	LINE	L1	4784	4995	-1151	3
chr8	124491349	124491350	chunk0197_300_1	31.11432	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	124491109	124491374	-20647262	+	L2a	LINE	L2	2739	3046	-373	3
chr8	124853441	124853442	chunk0197_316_1	65.5441	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	124853326	124853663	-20284973	+	L1ME4b	LINE	L1	549	892	0	3
chr8	125029715	125029716	chunk0197_318_1	50.6645	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	125029637	125029725	-20108911	-	L2a	LINE	L2	-19	3407	3306	3
chr8	125130017	125130018	chunk0197_328_1	6.6351	AR_DHT_Control	chr8	125129797	125130514	-20008122	-	L1MC3	LINE	L1	-8	7777	7046	3
chr8	125174307	125174308	chunk0197_333_1	11.757	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	125174100	125174332	-19964304	+	L2a	LINE	L2	3173	3426	0	3
chr8	125231470	125231471	chunk0197_336_1	7.77075	AR_DHT_Control	chr8	125231453	125231559	-19907077	+	L2b	LINE	L2	3122	3232	-155	3
chr8	125244894	125244895	chunk0197_337_1	41.932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	125244892	125245000	-19893636	+	L1MD	LINE	L1	2656	2764	-3382	3
chr8	125345613	125345614	chunk0197_343_1	130.00888	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	125345449	125345724	-19792912	-	L2c	LINE	L2	0	3387	3118	3
chr8	125430326	125430327	chunk0197_346_1	45.71196	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	125430291	125430329	-19708307	+	(AGG)n	Simple_repeat	Simple_repeat	1	38	0	3
chr8	125557058	125557059	chunk0197_352_1	4.88212	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	125557057	125557222	-19581414	+	MER5A1	DNA	hAT-Charlie	1	166	0	3
chr8	125566284	125566285	chunk0197_353_1	8.41215	AR_DHT_Control	chr8	125565835	125566388	-19572248	-	L1MEd	LINE	L1	-6227	859	270	3
chr8	125580123	125580124	chunk0197_354_1	59.98611	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	125580006	125580449	-19558187	-	L2a	LINE	L2	0	3426	2930	3
chr8	125648505	125648506	chunk0197_357_1	4.15945	AR_DHT_Control	chr8	125648135	125648551	-19490085	+	LTR33A_	LTR	ERVL	91	526	-5	3
chr8	125655095	125655096	chunk0197_358_1	10.0039	AR_DHT_Control	chr8	125655086	125655283	-19483353	-	MIRb	SINE	MIR	-16	252	54	3
chr8	125735382	125735383	chunk0197_359_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	125735168	125735583	-19403053	+	LTR27B	LTR	ERV1	171	594	0	3
chr8	125926144	125926145	chunk0197_363_1	11.89558	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	125925981	125926232	-19212404	-	L1MEc	LINE	L1	-5993	407	157	3
chr8	126558534	126558535	chunk0197_371_1	5.90945	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	126558529	126558588	-18580048	+	(CCCCGC)n	Simple_repeat	Simple_repeat	1	60	0	3
chr8	126563903	126563904	chunk0197_372_1	13.4697	AR_DHT_Control	chr8	126563782	126563912	-18574724	-	MIRb	SINE	MIR	-119	149	5	3
chr8	126785951	126785952	chunk0197_373_1	30.4721	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	126785941	126786052	-18352584	-	MER81	DNA	hAT-Blackjack	0	114	5	3
chr8	126793903	126793904	chunk0197_375_1	4.60172	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	126793829	126793960	-18344676	-	MIR3	SINE	MIR	-136	132	3	3
chr8	126866816	126866817	chunk0197_378_1	6.04153	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	126866789	126866831	-18271805	+	GA-rich	Low_complexity	Low_complexity	1	42	0	3
chr8	127014943	127014944	chunk0197_384_1	18.1935	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127014831	127015392	-18123244	-	L1ME4c	LINE	L1	-180	650	275	3
chr8	127022558	127022559	chunk0197_387_1	51.7888	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127022177	127023008	-18115628	-	L1M5	LINE	L1	-2113	4033	3158	3
chr8	127043334	127043335	chunk0197_390_1	57.80714	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127043273	127043415	-18095221	+	L2a	LINE	L2	3276	3412	-14	3
chr8	127091351	127091352	chunk0197_394_1	31.85506	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	127091034	127091623	-18047013	+	LTR10C	LTR	ERV1	1	591	0	3
chr8	127117903	127117904	chunk0197_401_1	23.5234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127117878	127118186	-18020450	-	AluJr	SINE	Alu	-6	306	1	3
chr8	127146425	127146426	chunk0197_402_1	22.2218	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127143636	127147253	-17991383	-	LOR1-int	LTR	ERV1	-2056	6064	1551	3
chr8	127198129	127198130	chunk0197_404_1	29.4882	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127198111	127198816	-17939820	-	L2a	LINE	L2	-3	3423	2640	3
chr8	127231514	127231515	chunk0197_407_1	5.60881	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	127231501	127231573	-17907063	+	MIRb	SINE	MIR	160	232	-36	3
chr8	127271128	127271129	chunk0197_412_1	8.95279	AR_DHT_Control	chr8	127270803	127271249	-17867387	+	MLT1K	LTR	ERVL-MaLR	120	579	-16	3
chr8	127321455	127321456	chunk0197_413_1	102.5201	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	127321404	127321705	-17816931	+	L1MEf	LINE	L1	817	1157	-5266	3
chr8	127340300	127340301	chunk0197_418_1	29.2547	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	127339397	127340448	-17798188	-	L2a	LINE	L2	-4	1901	725	3
chr8	127341759	127341760	chunk0197_420_1	16.88936	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127341503	127341985	-17796651	+	L2a	LINE	L2	2932	3422	-4	3
chr8	127396083	127396084	chunk0197_422_1	32.36381	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127395733	127396142	-17742494	+	L2c	LINE	L2	2980	3384	-3	3
chr8	127507530	127507531	chunk0197_431_1	93.009	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127507469	127507721	-17630915	+	MER58A	DNA	hAT-Charlie	1	224	0	3
chr8	127508132	127508133	chunk0197_434_1	6.84216	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127508031	127508192	-17630444	-	MER124	DNA?	DNA?	-202	195	41	3
chr8	127509893	127509894	chunk0197_435_1	47.2426	AR_DHT_Control	chr8	127509669	127510009	-17628627	+	L2c	LINE	L2	3054	3378	-9	3
chr8	127519395	127519396	chunk0197_436_1	247.406	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127519391	127519988	-17618648	+	L1MD1	LINE	L1	4501	5179	-1358	3
chr8	127539145	127539146	chunk0197_437_1	6.67113	AR_DHT_Control	chr8	127539126	127539239	-17599397	-	L2b	LINE	L2	-2	3373	3256	3
chr8	127560473	127560474	chunk0197_438_1	62.0104	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127560408	127560478	-17578158	-	L2	LINE	L2	-347	3072	3003	3
chr8	127847746	127847747	chunk0197_449_1	13.2826	AR_DHT_Control	chr8	127847288	127847891	-17290745	+	L1MC4a	LINE	L1	5466	5934	-1948	3
chr8	127852677	127852678	chunk0197_452_1	57.9521	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	127852631	127852714	-17285922	+	MIRb	SINE	MIR	166	268	0	3
chr8	127879613	127879614	chunk0197_456_1	115.2263	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127879563	127879741	-17258895	+	MIR	SINE	MIR	20	217	-45	3
chr8	127884529	127884530	chunk0197_458_1	32.4988	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	127884004	127884662	-17253974	-	L1ME3A	LINE	L1	-11	6162	5465	3
chr8	127892277	127892278	chunk0197_459_1	15.9387	AR_DHT_Control	chr8	127892137	127892387	-17246249	+	L2c	LINE	L2	3118	3379	-8	3
chr8	128165956	128165957	chunk0198_28_1	19.213	AR_DHT_Control	chr8	128165511	128166059	-16972577	-	MLT1G	LTR	ERVL-MaLR	-2	593	10	3
chr8	128317236	128317237	chunk0198_40_1	7.92366	AR_DHT_Control	chr8	128317180	128317289	-16821347	+	MIR3	SINE	MIR	61	169	-39	3
chr8	128330358	128330359	chunk0198_42_1	28.90512	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	128330351	128330458	-16808178	+	MER81	DNA	hAT-Blackjack	3	110	-4	3
chr8	128423807	128423808	chunk0198_44_1	16.20426	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	128423803	128423970	-16714666	-	MIRb	SINE	MIR	-45	223	20	3
chr8	128523460	128523461	chunk0198_53_1	31.3639	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	128523383	128523583	-16615053	+	MER58A	DNA	hAT-Charlie	1	222	-2	3
chr8	128536156	128536157	chunk0198_55_1	4.70357	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	128535871	128536288	-16602348	+	LTR16A2	LTR	ERVL	11	484	-11	3
chr8	128980657	128980658	chunk0198_58_1	7.53988	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	128980599	128980783	-16157853	+	MIRb	SINE	MIR	53	262	-6	3
chr8	129359236	129359237	chunk0198_62_1	4.93619	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	129359183	129359319	-15779317	-	MIR3	SINE	MIR	-28	180	53	3
chr8	129550051	129550052	chunk0198_64_1	25.6571	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	129550047	129550256	-15588380	+	Charlie17a	DNA	hAT-Charlie	5	216	-1	3
chr8	129816437	129816438	chunk0198_66_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	129816091	129816886	-15321750	-	L1PA16	LINE	L1	-5956	1378	11	3
chr8	129996905	129996906	chunk0198_73_1	48.6489	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	129996892	129996989	-15141647	-	L2a	LINE	L2	0	3426	3321	3
chr8	130015455	130015456	chunk0198_74_1	4.83532	AR_DHT_Control	chr8	130015406	130015566	-15123070	-	MIRc	SINE	MIR	-117	151	4	3
chr8	130073640	130073641	chunk0198_76_1	78.1081	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	130073409	130073706	-15064930	-	L2	LINE	L2	-1089	2330	2026	3
chr8	130122340	130122341	chunk0198_81_1	6.49378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	130121812	130122364	-15016272	+	L2a	LINE	L2	2809	3426	0	3
chr8	130122340	130122341	chunk0198_81_1	6.49378	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	130122278	130122412	-15016224	-	L2	LINE	L2	-511	2908	2782	3
chr8	130203355	130203356	chunk0198_85_1	5.6503	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	130203303	130203442	-14935194	+	MER91A	DNA	hAT-Tip100	4	143	-53	3
chr8	130529587	130529588	chunk0198_97_1	25.32974	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	130529542	130529912	-14608724	-	MSTD	LTR	ERVL-MaLR	0	396	4	3
chr8	130692408	130692409	chunk0198_100_1	5.77445	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	130690450	130692827	-14445809	-	L1P4d	LINE	L1	-3428	4713	2353	3
chr8	130721159	130721160	chunk0198_102_1	30.6273	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	130721054	130721229	-14417407	-	Kanga11a	DNA	TcMar-Tc2	-4	966	863	3
chr8	130734278	130734279	chunk0198_103_1	50.9075	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	130734176	130734437	-14404199	+	MIR	SINE	MIR	23	263	-5	3
chr8	130762248	130762249	chunk0198_107_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	130761802	130762252	-14376384	-	L1MA8	LINE	L1	-1	6290	5813	3
chr8	131319272	131319273	chunk0198_109_1	6.48643	AR_DHT_Control	chr8	131318294	131319431	-13819205	+	L2a	LINE	L2	2102	3361	-65	3
chr8	131618426	131618427	chunk0198_110_1	22.16841	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	131616533	131619527	-13519109	-	L1MC3	LINE	L1	-1	7784	4612	3
chr8	131836437	131836438	chunk0198_115_1	10.0576	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	131836264	131836499	-13302137	-	LTR78B	LTR	ERV1	-750	546	294	3
chr8	131843161	131843162	chunk0198_117_1	97.7737	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	131842924	131843371	-13295265	-	L2c	LINE	L2	-8	3379	2946	3
chr8	131883008	131883009	chunk0198_119_1	103.68037	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	131877699	131883893	-13254743	-	L1PA6	LINE	L1	-1	6326	174	3
chr8	132217930	132217931	chunk0198_130_1	13.5952	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	132217735	132218007	-12920629	-	MamRep434	DNA	TcMar-Tigger	-58	368	103	3
chr8	132440420	132440421	chunk0198_132_1	7.16019	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	132440174	132440486	-12698150	+	L2a	LINE	L2	3042	3372	-54	3
chr8	132731032	132731033	chunk0198_137_1	5.75839	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	132730993	132731140	-12407496	+	MIRb	SINE	MIR	2	168	-100	3
chr8	132764024	132764025	chunk0198_138_1	8.10618	AR_DHT_Control	chr8	132763976	132764101	-12374535	+	L2c	LINE	L2	2459	2580	-839	3
chr8	132899160	132899161	chunk0198_144_1	282.6001	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	132899024	132899208	-12239428	+	MIRc	SINE	MIR	51	236	-32	3
chr8	132919659	132919660	chunk0198_146_1	7.81783	AR_DHT_Control	chr8	132919582	132919804	-12218832	-	MER20	DNA	hAT-Charlie	0	219	1	3
chr8	133049341	133049342	chunk0198_154_1	6.71885	AR_DHT_Control	chr8	133049333	133049601	-12089035	-	MIR	SINE	MIR	0	262	21	3
chr8	133073174	133073175	chunk0198_155_1	26.1364	AR_DHT_Control	chr8	133073013	133073190	-12065446	-	MIRb	SINE	MIR	-2	228	53	3
chr8	133205333	133205334	chunk0198_164_1	53.1533	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133205329	133205382	-11933254	+	(TGTTT)n	Simple_repeat	Simple_repeat	1	54	0	3
chr8	133216557	133216558	chunk0198_166_1	38.64876	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	133216314	133216598	-11922038	-	MER102a	DNA	hAT-Charlie	-33	298	29	3
chr8	133297294	133297295	chunk0198_173_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133297283	133297328	-11841308	+	(GCGCCCC)n	Simple_repeat	Simple_repeat	1	47	0	3
chr8	133311181	133311182	chunk0198_174_1	16.1482	AR_DHT_Control	chr8	133311012	133312350	-11826286	+	MER65-int	LTR	ERV1	2753	3916	-2723	3
chr8	133413401	133413402	chunk0198_184_1	5.00614	AR_DHT_Control	chr8	133413275	133413461	-11725175	+	L2c	LINE	L2	3187	3382	-5	3
chr8	133424865	133424866	chunk0198_186_1	19.87457	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	133424730	133424897	-11713739	-	MER63A	DNA	hAT-Blackjack	-34	176	2	3
chr8	133508404	133508405	chunk0198_190_1	12.0793	AR_DHT_Control	chr8	133508344	133508528	-11630108	+	LTR16A1	LTR	ERVL	232	432	-24	3
chr8	133530111	133530112	chunk0198_194_1	5.77256	AR_DHT_Control	chr8	133529693	133530135	-11608501	+	L2a	LINE	L2	2915	3426	0	3
chr8	133595342	133595343	chunk0198_199_1	6.10159	AR_DHT_Control	chr8	133595043	133595399	-11543237	-	LTR16D	LTR	ERVL	0	651	185	3
chr8	133625969	133625970	chunk0198_200_1	8.57499	AR_DHT_Control	chr8	133625763	133626052	-11512584	+	L2c	LINE	L2	3117	3382	-5	3
chr8	133740342	133740343	chunk0198_205_1	10.7608	AR_DHT_Control	chr8	133740286	133740441	-11398195	+	L2b	LINE	L2	3195	3375	0	3
chr8	133779063	133779064	chunk0198_206_1	14.4671	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133778047	133782766	-11355870	-	L1PB1	LINE	L1	-2	6865	2103	3
chr8	133824893	133824894	chunk0198_210_1	133.1859	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133824854	133825097	-11313539	-	MIRb	SINE	MIR	-18	250	4	3
chr8	133827153	133827154	chunk0198_211_1	27.6561	AR_DHT_Control	chr8	133826995	133827191	-11311445	-	MIRb	SINE	MIR	-71	197	4	3
chr8	133900353	133900354	chunk0198_217_1	7.19831	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133899702	133900573	-11238063	+	L1MEb	LINE	L1	252	1213	-5096	3
chr8	133929146	133929147	chunk0198_219_1	30.21449	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	133928082	133929998	-11208638	-	Tigger5	DNA	TcMar-Tigger	-406	2000	2	3
chr8	133931661	133931662	chunk0198_220_1	12.9208	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133931532	133931789	-11206847	-	L1ME3	LINE	L1	-870	5276	5024	3
chr8	133956922	133956923	chunk0198_221_1	23.0018	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	133956844	133957081	-11181555	+	L2b	LINE	L2	3160	3424	-2	3
chr8	134000266	134000267	chunk0198_223_1	5.81334	AR_DHT_Control	chr8	134000003	134000274	-11138362	-	L2c	LINE	L2	-7	3380	3083	3
chr8	134140223	134140224	chunk0198_234_1	13.6624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	134139788	134140675	-10997961	+	L2a	LINE	L2	2409	3334	-92	3
chr8	134157901	134157902	chunk0198_237_1	19.77982	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	134157769	134158100	-10980536	-	MER58B	DNA	hAT-Charlie	0	341	1	3
chr8	134167746	134167747	chunk0198_239_1	87.8426	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	134167649	134167752	-10970884	-	LTR67B	LTR	ERVL	0	620	508	3
chr8	134528187	134528188	chunk0198_244_1	41.54822	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	134528153	134528312	-10610324	+	MIRb	SINE	MIR	20	193	-75	3
chr8	134558880	134558881	chunk0198_249_1	7.84637	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	134558723	134558932	-10579704	-	MIRb	SINE	MIR	-6	262	27	3
chr8	134644776	134644777	chunk0198_253_1	5.21805	AR_DHT_Control	chr8	134644426	134645020	-10493616	+	(CA)n	Simple_repeat	Simple_repeat	1	599	0	3
chr8	134815979	134815980	chunk0198_262_1	26.0732	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	134815500	134816070	-10322566	+	L2a	LINE	L2	2820	3425	-1	3
chr8	134867124	134867125	chunk0198_265_1	168.7552	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	134867009	134867189	-10271447	-	L2b	LINE	L2	-208	3167	2970	3
chr8	134991055	134991056	chunk0198_269_1	30.5538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	134990972	134991315	-10147321	-	L1MC4	LINE	L1	-411	7631	7299	3
chr8	135291467	135291468	chunk0198_272_1	6.35715	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	135291375	135291942	-9846694	+	MLT2B3	LTR	ERVL	1	544	-10	3
chr8	135418790	135418791	chunk0198_273_1	9.90105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	135418704	135419369	-9719267	+	L1MA1	LINE	L1	5640	6299	-3	3
chr8	135515623	135515624	chunk0198_278_1	31.20455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	135515452	135515682	-9622954	+	LTR33	LTR	ERVL	3	224	-291	3
chr8	135536245	135536246	chunk0198_281_1	4.46949	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	135536234	135536262	-9602374	+	(T)n	Simple_repeat	Simple_repeat	1	28	0	3
chr8	135562267	135562268	chunk0198_282_1	7.82111	AR_DHT_Control	chr8	135561763	135562519	-9576117	+	Tigger3	DNA	TcMar-Tigger	2272	3020	-9	3
chr8	135577204	135577205	chunk0198_284_1	53.6353	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	135575652	135579336	-9559300	-	L1MC3	LINE	L1	0	7785	4009	3
chr8	135593881	135593882	chunk0198_287_1	25.1353	AR_DHT_Control	chr8	135593829	135594036	-9544600	-	L2c	LINE	L2	-160	3227	3009	3
chr8	135623393	135623394	chunk0198_288_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	135623306	135623502	-9515134	+	MIRb	SINE	MIR	17	220	-48	3
chr8	136752137	136752138	chunk0198_295_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	136751842	136752970	-8385666	-	L1M3b	LINE	L1	-5159	2337	1217	3
chr8	137925987	137925988	chunk0198_298_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	137925605	137926366	-7212270	-	LTR41B	LTR	ERVL	0	758	3	3
chr8	138111551	138111552	chunk0198_300_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	138111369	138111567	-7027069	+	MIR	SINE	MIR	1	203	-59	3
chr8	138260251	138260252	chunk0198_303_1	6.35715	AR_DHT_Control	chr8	138259865	138260448	-6878188	+	LTR22B2	LTR	ERVK	1	599	-1	3
chr8	138521719	138521720	chunk0198_307_1	34.6787	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	138521615	138521962	-6616674	+	L1ME4a	LINE	L1	5690	6089	-35	3
chr8	139429989	139429990	chunk0198_310_1	13.42724	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	139429707	139429993	-5708643	+	L2b	LINE	L2	3082	3374	-1	4
chr8	139763633	139763634	chunk0198_318_1	8.71584	AR_DHT_Control	chr8	139763616	139763687	-5374949	+	(CA)n	Simple_repeat	Simple_repeat	1	71	0	4
chr8	139919462	139919463	chunk0198_327_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	139919381	139919529	-5219107	+	L1MB8	LINE	L1	6034	6178	0	4
chr8	140012607	140012608	chunk0198_330_1	6.86162	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140012541	140012626	-5126010	-	MIR	SINE	MIR	-150	112	13	4
chr8	140034730	140034731	chunk0198_333_1	5.53391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140034657	140034869	-5103767	-	MIRb	SINE	MIR	-6	262	3	4
chr8	140154138	140154139	chunk0198_339_1	7.36432	AR_DHT_Control	chr8	140154009	140154880	-4983756	+	L2c	LINE	L2	2354	3382	-5	4
chr8	140198887	140198888	chunk0198_340_1	18.1125	AR_DHT_Control	chr8	140198866	140198943	-4939693	-	L2a	LINE	L2	-1	3425	3348	4
chr8	140209354	140209355	chunk0198_341_1	44.61826	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140209225	140209355	-4929281	+	L2b	LINE	L2	3226	3375	0	4
chr8	140404709	140404710	chunk0198_350_1	8.11543	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140404588	140404731	-4733905	+	L1ME3G	LINE	L1	601	739	-185	4
chr8	140496543	140496544	chunk0198_353_1	7.36432	AR_DHT_Control	chr8	140496214	140496897	-4641739	-	L1ME1	LINE	L1	0	6179	5490	4
chr8	140802870	140802871	chunk0198_360_1	15.2538	AR_DHT_Control	chr8	140801785	140802958	-4335678	+	Tigger3b	DNA	TcMar-Tigger	2	1231	0	4
chr8	140832693	140832694	chunk0198_361_1	4.59852	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	140832614	140832732	-4305904	-	L2	LINE	L2	-722	2697	2582	4
chr8	140931279	140931280	chunk0198_363_1	24.02518	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	140931115	140931364	-4207272	-	L1ME4b	LINE	L1	-31	861	608	4
chr8	140946747	140946748	chunk0198_365_1	18.41751	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	140946604	140946804	-4191832	+	L2a	LINE	L2	3089	3305	-121	4
chr8	140983729	140983730	chunk0198_366_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	140983649	140983745	-4154891	+	GA-rich	Low_complexity	Low_complexity	1	98	0	4
chr8	141056051	141056052	chunk0198_370_1	4.09301	AR_DHT_Control	chr8	141055984	141056150	-4082486	+	MIRb	SINE	MIR	1	186	-82	4
chr8	141378561	141378562	chunk0198_391_1	33.9614	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr8	141378537	141378630	-3760006	-	MIR3	SINE	MIR	-48	160	63	4
chr8	141576673	141576674	chunk0198_398_1	6.94032	AR_DHT_Control	chr8	141576518	141576744	-3561892	-	MIR	SINE	MIR	-4	258	21	4
chr8	141732313	141732314	chunk0198_399_1	11.3974	AR_DHT_Control	chr8	141732137	141732451	-3406185	+	L2b	LINE	L2	3050	3354	-21	4
chr8	141897269	141897270	chunk0198_407_1	31.3912	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	141897047	141897535	-3241101	+	L1MD2	LINE	L1	5511	6050	-309	4
chr8	142617900	142617901	chunk0198_411_1	9.68461	AR_DHT_Control	chr8	142617877	142617936	-2520700	+	(CA)n	Simple_repeat	Simple_repeat	1	59	0	4
chr8	142742612	142742613	chunk0198_418_1	8.58061	AR_DHT_Control	chr8	142742592	142742751	-2395885	-	L3	LINE	CR1	-110	3989	3820	4
chr8	142909189	142909190	chunk0198_419_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	142908553	142909739	-2228897	+	L1PB	LINE	L1	4576	5775	-376	4
chr8	142982006	142982007	chunk0198_421_1	6.22495	AR_DHT_Control	chr8	142981672	142982025	-2156611	-	L1MEg	LINE	L1	-4624	1618	1279	4
chr8	143117556	143117557	chunk0198_425_1	30.29445	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	143117085	143117621	-2021015	-	LTR36	LTR	ERV1	-1	610	1	4
chr8	143123833	143123834	chunk0198_427_1	5.94305	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	143122739	143125236	-2013400	+	(CA)n	Simple_repeat	Simple_repeat	1	2518	0	4
chr8	143446294	143446295	chunk0198_434_1	4.66817	AR_DHT_Control	chr8	143445723	143446599	-1692037	+	L1M5	LINE	L1	4480	5402	-744	4
chr8	143895290	143895291	chunk0198_443_1	13.6548	AR_DHT_Control	chr8	143895161	143895303	-1243333	+	L1MC5	LINE	L1	9157	9303	-1	4
chr8	144003541	144003542	chunk0198_445_1	12.8609	AR_DHT_Control	chr8	144003449	144003744	-1134892	+	L1MEc	LINE	L1	117	406	-5994	4
chr8	144063547	144063548	chunk0198_446_1	49.91464	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	144063426	144063587	-1075049	+	L2a	LINE	L2	2998	3157	-269	4
chr8	144253703	144253704	chunk0198_454_1	128.8982	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	144253656	144253859	-884777	-	L1MEd	LINE	L1	-5450	1653	1434	4
chr8	144614789	144614790	chunk0198_464_1	9.88994	AR_DHT_Control	chr8	144614652	144614998	-523638	-	L1MEc	LINE	L1	-5639	761	400	4
chr8	144670005	144670006	chunk0198_465_1	30.4532	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	144669544	144670147	-468489	+	L1MB5	LINE	L1	5163	5848	-326	4
chr8	144816944	144816945	chunk0198_470_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	144816722	144817065	-321571	+	L1MA4	LINE	L1	5950	6288	-12	4
chr8	144828521	144828522	chunk0198_471_1	4.33257	AR_DHT_Control	chr8	144828407	144828827	-309809	+	L2c	LINE	L2	2918	3383	-4	4
chr8	145007113	145007114	chunk0198_475_1	6.29634	AR_DHT_Control	chr8	145006878	145007151	-131485	+	L1M4	LINE	L1	5007	5288	-858	4
chr8	145022012	145022013	chunk0198_477_1	76.2679	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr8	145021243	145022259	-116377	-	LTR5A	LTR	ERVK	0	1033	1	4
chr8	145026938	145026939	chunk0198_478_1	5.10868	SRA057177_Lncap_AR_DHT_10nm_4hr	chr8	145026349	145027823	-110813	-	HERVK-int	LTR	ERVK	-6090	1446	1	4
chr8	145029535	145029536	chunk0198_479_1	15.2258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr8	145028835	145032160	-106476	+	HERVK14C-int	LTR	ERVK	4106	7434	0	4
chr9	111598	111599	chunk0198_1_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	111566	111849	-138282868	+	L1MC5	LINE	L1	8771	9066	-238	4
chr9	261580	261581	chunk0198_3_1	17.3683	AR_DHT_Control	chr9	261398	261984	-138132733	-	L1MEg	LINE	L1	-3288	2858	2238	4
chr9	288381	288382	chunk0198_5_1	61.04665	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	288320	288557	-138106160	+	MIR	SINE	MIR	6	260	-2	4
chr9	312644	312645	chunk0198_17_1	87.8379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	312434	312761	-138081956	+	L4_B_Mam	LINE	RTE-X	3724	4113	-877	4
chr9	489403	489404	chunk0199_8_1	21.05193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	489361	489448	-137905269	+	MER53	DNA	hAT	5	91	-102	4
chr9	489403	489404	chunk0199_8_1	21.05193	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	489381	489466	-137905251	-	MER53	DNA	hAT	-14	179	95	4
chr9	591494	591495	chunk0199_23_1	87.2575	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	591340	591611	-137803106	+	L2b	LINE	L2	2758	3070	-349	4
chr9	747341	747342	chunk0199_32_1	7.05249	AR_DHT_Control	chr9	747313	747371	-137647346	+	GA-rich	Low_complexity	Low_complexity	1	58	0	4
chr9	817019	817020	chunk0199_33_1	11.4584	AR_DHT_Control	chr9	816587	817133	-137577584	+	L1MD1	LINE	L1	5561	6172	-6	4
chr9	1140918	1140919	chunk0199_39_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	1140581	1141372	-137253345	-	L1M3b	LINE	L1	-5072	2424	1814	4
chr9	2188917	2188918	chunk0199_62_1	21.0657	AR_DHT_Control	chr9	2188632	2189208	-136205509	-	MLT1E2	LTR	ERVL-MaLR	0	627	1	4
chr9	2298199	2298200	chunk0199_64_1	52.6832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	2298068	2298247	-136096470	-	L2a	LINE	L2	0	3426	3222	4
chr9	2341087	2341088	chunk0199_66_1	44.1493	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	2341038	2341487	-136053230	+	ERVL-E-int	LTR	ERVL	736	1173	-4494	4
chr9	2368051	2368052	chunk0199_68_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	2367187	2372371	-136022346	+	L1MA5A	LINE	L1	63	5202	-1643	4
chr9	2401873	2401874	chunk0199_72_1	37.9377	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	2397725	2403382	-135991335	-	L1PA7	LINE	L1	0	6469	702	4
chr9	2427664	2427665	chunk0199_74_1	23.72813	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	2427628	2427812	-135966905	+	MIRc	SINE	MIR	2	188	-80	4
chr9	2436922	2436923	chunk0199_75_1	26.00024	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	2433676	2440086	-135954631	-	L1PB1	LINE	L1	-3	6864	253	4
chr9	2486860	2486861	chunk0199_81_1	27.7214	AR_DHT_Control	chr9	2486653	2487274	-135907443	+	L3	LINE	CR1	3364	4071	-28	4
chr9	2633055	2633056	chunk0199_87_1	20.5485	AR_DHT_Control	chr9	2633051	2633088	-135761629	+	(GT)n	Simple_repeat	Simple_repeat	1	37	0	4
chr9	2759435	2759436	chunk0199_95_1	9.31879	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	2759219	2759658	-135635059	-	LTR56	LTR	ERV1	0	437	1	4
chr9	2853789	2853790	chunk0199_99_1	16.206	AR_DHT_Control	chr9	2853483	2854020	-135540697	+	Tigger3c	DNA	TcMar-Tigger	1	547	-55	4
chr9	2954553	2954554	chunk0199_101_1	33.3627	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	2954081	2955074	-135439643	+	HAL1b	LINE	L1	1070	2125	-296	4
chr9	3350584	3350585	chunk0199_110_1	69.68891	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	3350034	3351269	-135043448	+	L1MC1	LINE	L1	5055	6322	-11	4
chr9	3432130	3432131	chunk0199_115_1	66.0893	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	3430689	3432941	-134961776	+	Tigger2	DNA	TcMar-Tigger	3	2272	-446	4
chr9	3525700	3525701	chunk0199_119_1	6.73937	AR_DHT_Control	chr9	3525640	3525723	-134868994	+	(CA)n	Simple_repeat	Simple_repeat	1	83	0	4
chr9	3614787	3614788	chunk0199_123_1	27.5523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	3614034	3617317	-134777400	-	L1PA11	LINE	L1	-2	6792	3465	4
chr9	3716647	3716648	chunk0199_127_1	40.7188	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	3715194	3719579	-134675138	+	L1M1	LINE	L1	2535	7008	-713	4
chr9	3763648	3763649	chunk0199_128_1	10.1214	AR_DHT_Control	chr9	3763500	3764514	-134630203	-	L1MC	LINE	L1	-1299	4847	3790	4
chr9	3837521	3837522	chunk0199_130_1	10.7282	AR_DHT_Control	chr9	3837236	3838083	-134556634	+	L1MC1	LINE	L1	5449	6327	-6	4
chr9	3882145	3882146	chunk0199_134_1	76.56408	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	3882071	3882162	-134512555	-	L2b	LINE	L2	-3	3372	3276	4
chr9	4244418	4244419	chunk0199_151_1	41.4272	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	4244201	4244574	-134150143	+	Tigger13a	DNA	TcMar-Tigger	29	418	-353	4
chr9	4264412	4264413	chunk0199_154_1	81.4927	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	4263667	4264838	-134129879	+	L2a	LINE	L2	1987	3351	-75	4
chr9	4318942	4318943	chunk0199_160_1	41.16468	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	4318132	4319472	-134075245	+	L1MC4	LINE	L1	6699	8014	-28	4
chr9	4407747	4407748	chunk0199_164_1	9.21264	AR_DHT_Control	chr9	4407674	4408355	-133986362	+	L1MA2	LINE	L1	6474	7153	-571	4
chr9	4658027	4658028	chunk0199_183_1	22.8688	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	4657967	4658216	-133736501	+	MLT1C	LTR	ERVL-MaLR	190	467	0	4
chr9	4811335	4811336	chunk0199_198_1	14.18074	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	4811306	4812427	-133582290	-	L1MA5	LINE	L1	-180	7141	5822	4
chr9	4914194	4914195	chunk0199_204_1	6.48643	AR_DHT_Control	chr9	4914184	4914493	-133480224	-	AluJr	SINE	Alu	-2	310	1	4
chr9	4927957	4927958	chunk0199_205_1	10.1358	AR_DHT_Control	chr9	4927856	4928102	-133466615	-	MER58B	DNA	hAT-Charlie	-5	336	92	4
chr9	4932047	4932048	chunk0199_206_1	26.02947	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	4931863	4932525	-133462192	-	L1MB4	LINE	L1	-6	6174	5517	4
chr9	5038425	5038426	chunk0199_211_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5038172	5038539	-133356178	+	L1MB7	LINE	L1	3365	3770	-2376	4
chr9	5144410	5144411	chunk0199_216_1	47.3914	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	5143958	5146332	-133248385	-	L1PA13	LINE	L1	-2957	3809	1378	4
chr9	5190293	5190294	chunk0199_218_1	25.8927	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5189847	5190512	-133204205	-	L1MD1	LINE	L1	-5	6237	5542	4
chr9	5264227	5264228	chunk0199_222_1	10.5201	AR_DHT_Control	chr9	5264209	5266258	-133128459	-	L1PB4	LINE	L1	-3674	3188	1000	4
chr9	5284952	5284953	chunk0199_223_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	5284799	5285489	-133109228	-	L1M2b	LINE	L1	-6485	724	1	4
chr9	5360759	5360760	chunk0199_226_1	10.1195	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5359804	5360931	-133033786	-	MER63C	DNA	hAT-Blackjack	0	1061	1	4
chr9	5364466	5364467	chunk0199_228_1	15.51531	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	5364371	5365552	-133029165	+	L1MC3	LINE	L1	6014	7192	-593	4
chr9	5365289	5365290	chunk0199_229_1	5.15194	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5364371	5365552	-133029165	+	L1MC3	LINE	L1	6014	7192	-593	4
chr9	5367033	5367034	chunk0199_230_1	10.698	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5367020	5367068	-133027649	+	(AC)n	Simple_repeat	Simple_repeat	1	48	0	4
chr9	5379013	5379014	chunk0199_231_1	67.8524	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	5378951	5379038	-133015679	+	L1P4	LINE	L1	2738	2825	-3321	4
chr9	5389349	5389350	chunk0199_233_1	9.68843	AR_DHT_Control	chr9	5388933	5389468	-133005249	-	MER90	LTR	ERV1	0	575	20	4
chr9	5500080	5500081	chunk0199_240_1	8.9624	AR_DHT_Control	chr9	5500000	5500162	-132894555	-	LTR46	LTR	ERV1	-138	322	161	4
chr9	5620613	5620614	chunk0199_244_1	39.4473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	5620376	5620819	-132773898	-	Tigger3b	DNA	TcMar-Tigger	-773	458	2	4
chr9	6029509	6029510	chunk0199_257_1	15.8739	AR_DHT_Control	chr9	6029058	6029552	-132365165	-	L1MC5a	LINE	L1	-579	2198	1689	4
chr9	6144231	6144232	chunk0199_261_1	33.64124	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	6144128	6144489	-132250228	+	L1MEg	LINE	L1	1523	1884	-4358	4
chr9	6198537	6198538	chunk0199_262_1	8.86683	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	6198341	6198592	-132196125	-	L4_A_Mam	LINE	RTE-X	-3490	1500	1236	4
chr9	6239961	6239962	chunk0199_263_1	24.0375	AR_DHT_Control	chr9	6239912	6240105	-132154612	-	L1MC5a	LINE	L1	-1460	1317	1109	4
chr9	6278238	6278239	chunk0199_264_1	10.7541	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	6278031	6278253	-132116464	+	Tigger3b	DNA	TcMar-Tigger	1	225	-1006	4
chr9	6320821	6320822	chunk0199_267_1	19.5433	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	6318658	6321653	-132073064	+	L1PB1	LINE	L1	3892	6867	0	4
chr9	6342296	6342297	chunk0199_268_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	6342011	6342961	-132051756	+	L1MA4	LINE	L1	6	952	-6216	4
chr9	6371365	6371366	chunk0199_269_1	5.9729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	6370707	6371401	-132023316	+	THE1-int	LTR	ERVL-MaLR	629	1319	-261	4
chr9	6425353	6425354	chunk0199_275_1	13.2041	AR_DHT_Control	chr9	6424519	6425472	-131969245	-	L1MC3	LINE	L1	-2	7783	6728	4
chr9	6477833	6477834	chunk0199_279_1	8.09329	AR_DHT_Control	chr9	6477821	6477847	-131916870	+	(GTT)n	Simple_repeat	Simple_repeat	1	26	0	4
chr9	6502573	6502574	chunk0199_281_1	45.58869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	6502474	6502575	-131892142	-	FLAM_A	SINE	Alu	-28	114	12	4
chr9	6517002	6517003	chunk0199_283_1	86.5371	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	6516133	6517328	-131877389	-	L1MD2	LINE	L1	-4486	2154	712	4
chr9	6856055	6856056	chunk0199_296_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	6856046	6856137	-131538580	+	L2b	LINE	L2	3290	3370	-5	4
chr9	7008549	7008550	chunk0199_304_1	11.7947	AR_DHT_Control	chr9	7007904	7009271	-131385446	+	L1M3e	LINE	L1	2	2248	-4789	4
chr9	7104069	7104070	chunk0199_307_1	7.12934	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	7103879	7104109	-131290608	+	L2b	LINE	L2	3146	3375	0	4
chr9	7111640	7111641	chunk0199_308_1	22.1219	AR_DHT_Control	chr9	7111591	7111776	-131282941	-	L2b	LINE	L2	-312	3075	2910	4
chr9	7180475	7180476	chunk0199_314_1	7.77075	AR_DHT_Control	chr9	7180069	7180535	-131214182	+	MLT1D	LTR	ERVL-MaLR	2	505	0	4
chr9	7237723	7237724	chunk0199_318_1	13.92411	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	7237657	7238196	-131156521	+	LTR40a	LTR	ERVL	1	519	0	4
chr9	7328734	7328735	chunk0199_319_1	7.97093	AR_DHT_Control	chr9	7328726	7328777	-131065940	+	MLT1F	LTR	ERVL-MaLR	498	548	0	4
chr9	7484203	7484204	chunk0199_321_1	63.0502	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	7483781	7485046	-130909671	+	L1PA10	LINE	L1	4903	6168	0	4
chr9	8007713	8007714	chunk0199_325_1	8.27376	AR_DHT_Control	chr9	8002376	8009240	-130385477	-	L1PA3	LINE	L1	-3	6325	212	4
chr9	8329996	8329997	chunk0199_326_1	6.48643	AR_DHT_Control	chr9	8324107	8330317	-130064400	-	L1PA7	LINE	L1	-3	6336	15	4
chr9	8547890	8547891	chunk0199_327_1	18.52677	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	8547878	8547965	-129846752	-	L2a	LINE	L2	0	3426	3339	4
chr9	10977553	10977554	chunk0199_337_1	40.996	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	10976643	10977572	-127417145	+	L1PBa	LINE	L1	2460	3444	-3418	4
chr9	11065131	11065132	chunk0199_339_1	5.73904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	11064761	11065329	-127329388	+	LTR9A1	LTR	ERV1	1	606	-122	4
chr9	11106944	11106945	chunk0199_340_1	7.97574	AR_DHT_Control	chr9	11106666	11106948	-127287769	-	LTR23	LTR	ERV1	-10	427	161	4
chr9	11244893	11244894	chunk0199_342_1	8.27376	AR_DHT_Control	chr9	11244816	11245709	-127149008	-	L1PA11	LINE	L1	-5	6169	5302	4
chr9	11314353	11314354	chunk0199_343_1	13.1449	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	11313725	11315497	-127079220	-	L1MC	LINE	L1	-1445	4701	3010	4
chr9	11996522	11996523	chunk0199_348_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	11995850	12000000	-126394717	+	L1M2a	LINE	L1	401	4634	-2928	4
chr9	12092047	12092048	chunk0199_349_1	6.83133	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	12091825	12092673	-126302044	-	L1P4b	LINE	L1	-6436	898	9	4
chr9	12216901	12216902	chunk0199_350_1	9.83323	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	12216586	12217326	-126177391	-	L1ME2	LINE	L1	-16	6148	5325	4
chr9	12315524	12315525	chunk0199_351_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	12309511	12315966	-126078751	-	L1PA8	LINE	L1	0	6487	11	4
chr9	12496905	12496906	chunk0199_353_1	12.4542	AR_DHT_Control	chr9	12496497	12497268	-125897449	-	L1ME1	LINE	L1	-1	6178	5360	4
chr9	12516173	12516174	chunk0199_357_1	112.90985	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	12516072	12516609	-125878108	-	LTR108e_Mam	LTR	ERVL	0	548	4	4
chr9	12658184	12658185	chunk0199_359_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	12657962	12658253	-125736464	-	MER52D	LTR	ERV1	0	1755	1458	4
chr9	12706083	12706084	chunk0199_360_1	19.38342	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	12706001	12706322	-125688395	-	Tigger13a	DNA	TcMar-Tigger	-406	365	24	4
chr9	12877385	12877386	chunk0199_371_1	63.20406	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	12877163	12877815	-125516902	+	Tigger3b	DNA	TcMar-Tigger	32	696	-535	4
chr9	12888549	12888550	chunk0199_373_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	12888027	12890987	-125503730	+	L1MA2	LINE	L1	77	3155	-4410	4
chr9	12909125	12909126	chunk0199_374_1	5.69226	AR_DHT_Control	chr9	12909092	12909763	-125484954	-	LTR8	LTR	ERV1	-8	683	1	4
chr9	12946296	12946297	chunk0199_375_1	16.4778	AR_DHT_Control	chr9	12946085	12946516	-125448201	-	MLT2B4	LTR	ERVL	-90	466	4	4
chr9	13027362	13027363	chunk0199_376_1	6.13915	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	13027326	13027642	-125367075	-	L2a	LINE	L2	-177	3249	2915	4
chr9	13034066	13034067	chunk0199_379_1	78.21293	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	13033978	13034156	-125360561	+	L2c	LINE	L2	3176	3386	-1	4
chr9	13070928	13070929	chunk0199_380_1	8.96258	AR_DHT_Control	chr9	13070657	13071058	-125323659	+	L1MEc	LINE	L1	22	421	-5981	4
chr9	13149629	13149630	chunk0199_385_1	34.5046	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	13149491	13149711	-125245006	+	L2b	LINE	L2	3166	3387	0	4
chr9	13208981	13208982	chunk0199_389_1	19.71258	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	13208847	13209087	-125185630	+	L1M6B	LINE	L1	32	264	-105	4
chr9	13271934	13271935	chunk0199_395_1	34.6752	AR_DHT_Control	chr9	13271778	13272159	-125122558	+	L1ME1	LINE	L1	5779	6166	-13	4
chr9	13547336	13547337	chunk0199_408_1	8.2993	AR_DHT_Control	chr9	13547253	13547433	-124847284	+	MIRb	SINE	MIR	86	262	-6	4
chr9	13616029	13616030	chunk0199_416_1	9.35087	AR_DHT_Control	chr9	13616016	13616359	-124778358	+	MLT1A	LTR	ERVL-MaLR	1	370	-4	4
chr9	13697523	13697524	chunk0199_425_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	13694768	13698544	-124696173	-	L1PA13	LINE	L1	-2900	3866	1	4
chr9	13732411	13732412	chunk0199_428_1	7.37323	AR_DHT_Control	chr9	13732390	13732520	-124662197	+	L2c	LINE	L2	3254	3377	-10	4
chr9	13801514	13801515	chunk0199_432_1	8.27376	AR_DHT_Control	chr9	13801414	13801629	-124593088	-	MER58A	DNA	hAT-Charlie	-2	222	1	4
chr9	13838822	13838823	chunk0199_433_1	10.9091	AR_DHT_Control	chr9	13837912	13839393	-124555324	+	L1ME1	LINE	L1	4577	6169	-10	4
chr9	13873270	13873271	chunk0199_435_1	6.25826	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	13873085	13873405	-124521312	-	L1MA5	LINE	L1	-3975	3671	3383	4
chr9	13905444	13905445	chunk0199_436_1	4.69341	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	13905295	13905652	-124489065	+	L2c	LINE	L2	3002	3379	-8	4
chr9	13947387	13947388	chunk0199_438_1	13.45286	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	13946676	13947417	-124447300	-	L1M6	LINE	L1	-4546	1950	1204	4
chr9	13970718	13970719	chunk0199_439_1	6.94032	AR_DHT_Control	chr9	13970472	13970920	-124423797	+	MER70A	LTR	ERVL	15	472	0	4
chr9	14015974	14015975	chunk0199_441_1	11.8978	AR_DHT_Control	chr9	14015084	14016035	-124378682	+	L2a	LINE	L2	2340	3368	-58	4
chr9	14407107	14407108	chunk0200_1_1	8.64577	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	14407025	14407158	-123987559	+	MLT1J1	LTR	ERVL-MaLR	422	552	-10	4
chr9	14445335	14445336	chunk0200_3_1	6.7814	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	14445115	14445774	-123948943	-	L1ME3D	LINE	L1	-1789	4357	3699	4
chr9	14621067	14621068	chunk0200_14_1	20.80838	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	14621037	14621104	-123773613	+	MIR3	SINE	MIR	113	189	-19	4
chr9	14700719	14700720	chunk0200_21_1	187.6037	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	14700009	14700822	-123693895	+	L2c	LINE	L2	2437	3383	-4	4
chr9	14761967	14761968	chunk0200_26_1	14.9872	AR_DHT_Control	chr9	14761544	14762092	-123632625	+	MER44B	DNA	TcMar-Tigger	1	550	0	4
chr9	14983811	14983812	chunk0200_30_1	104.6277	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	14983637	14984027	-123410690	+	L1ME4a	LINE	L1	5563	5966	-158	4
chr9	15112996	15112997	chunk0200_37_1	27.17504	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	15112865	15113042	-123281675	+	L2b	LINE	L2	3212	3382	-5	4
chr9	15491488	15491489	chunk0200_48_1	26.2409	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	15490935	15491540	-122903177	-	Tigger17a	DNA	TcMar-Tigger	-3	651	1	4
chr9	15543520	15543521	chunk0200_52_1	12.1886	AR_DHT_Control	chr9	15543499	15543650	-122851067	-	Tigger1	DNA	TcMar-Tigger	0	2418	2268	4
chr9	15701220	15701221	chunk0200_59_1	7.65994	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	15700784	15701460	-122693257	-	L1MA4	LINE	L1	-699	5598	4927	4
chr9	15714845	15714846	chunk0200_61_1	22.3697	AR_DHT_Control	chr9	15713747	15715259	-122679458	-	ERVL-E-int	LTR	ERVL	-2955	2712	1185	4
chr9	16166820	16166821	chunk0200_73_1	8.46211	AR_DHT_Control	chr9	16166460	16167631	-122227086	+	L1MC2	LINE	L1	5161	6326	-18	4
chr9	16225453	16225454	chunk0200_76_1	21.10369	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	16223083	16229454	-122165263	+	L1PA7	LINE	L1	4	6451	-18	4
chr9	16528772	16528773	chunk0200_93_1	7.78444	AR_DHT_Control	chr9	16528590	16528844	-121865873	+	L1ME3G	LINE	L1	362	598	-326	4
chr9	16990132	16990133	chunk0200_115_1	11.856	AR_DHT_Control	chr9	16989808	16990224	-121404493	-	L1ME1	LINE	L1	-232	5947	5517	4
chr9	17117434	17117435	chunk0200_119_1	12.64007	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	17117217	17117530	-121277187	-	L2c	LINE	L2	-38	3349	3023	4
chr9	17373852	17373853	chunk0200_126_1	7.36432	AR_DHT_Control	chr9	17370005	17374578	-121020139	+	L1MA3	LINE	L1	2433	7026	-698	4
chr9	17423460	17423461	chunk0200_127_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	17422422	17424107	-120970610	-	L1M1	LINE	L1	-5136	2429	13	4
chr9	17482528	17482529	chunk0200_129_1	143.83151	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	17482320	17482836	-120911881	+	L1M3b	LINE	L1	4558	5094	-1256	4
chr9	17637484	17637485	chunk0200_134_1	6.0927	AR_DHT_Control	chr9	17637388	17637513	-120757204	+	L2c	LINE	L2	3195	3332	-55	4
chr9	17644563	17644564	chunk0200_135_1	33.10059	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	17641444	17645151	-120749566	-	L1PA7	LINE	L1	-4	6465	2631	4
chr9	17738081	17738082	chunk0200_137_1	8.15319	AR_DHT_Control	chr9	17737800	17738185	-120656532	+	L2c	LINE	L2	2965	3364	-23	4
chr9	17832991	17832992	chunk0200_138_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	17832830	17833008	-120561709	+	MIRb	SINE	MIR	5	201	-67	4
chr9	17888115	17888116	chunk0200_139_1	4.73937	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	17887891	17888492	-120506225	+	MLT1E1A	LTR	ERVL-MaLR	1	673	-7	4
chr9	18040587	18040588	chunk0200_142_1	5.82105	AR_DHT_Control	chr9	18039987	18040654	-120354063	+	BLACKJACK	DNA	hAT-Blackjack	1	710	-2259	4
chr9	18280574	18280575	chunk0200_153_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	18280370	18280815	-120113902	-	L1M4	LINE	L1	-1489	4657	4233	4
chr9	18382975	18382976	chunk0200_156_1	52.8659	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	18382698	18382979	-120011738	+	MamRTE1	LINE	RTE-BovB	3189	3508	-304	4
chr9	18393938	18393939	chunk0200_158_1	46.26021	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	18393784	18394006	-120000711	+	MLT1L	LTR	ERVL-MaLR	364	597	-13	4
chr9	18873394	18873395	chunk0200_163_1	6.99656	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	18872344	18876301	-119518416	-	L1PB1	LINE	L1	-7	6860	2791	4
chr9	18972489	18972490	chunk0200_166_1	72.1517	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	18972459	18972535	-119422182	-	MIRb	SINE	MIR	-3	259	175	4
chr9	19246578	19246579	chunk0200_176_1	46.7703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	19246542	19247400	-119147317	+	L2a	LINE	L2	1486	2394	-1025	4
chr9	19381495	19381496	chunk0200_183_1	16.3936	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	19381088	19381717	-119013000	-	L1MB5	LINE	L1	-9	6165	5474	4
chr9	19421128	19421129	chunk0200_186_1	21.26854	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	19420926	19421259	-118973458	-	Tigger3a	DNA	TcMar-Tigger	-19	329	4	4
chr9	20071938	20071939	chunk0200_196_1	9.76623	AR_DHT_Control	chr9	20071590	20072499	-118322218	-	MER21A	LTR	ERVL	0	931	15	4
chr9	20526670	20526671	chunk0200_207_1	9.99437	AR_DHT_Control	chr9	20526209	20527033	-117867684	-	L1ME3A	LINE	L1	-30	6143	5254	4
chr9	20566551	20566552	chunk0200_212_1	104.1136	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	20566541	20566680	-117828037	+	L2c	LINE	L2	3253	3385	-2	4
chr9	20639804	20639805	chunk0200_224_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	20639724	20639862	-117754855	-	L2a	LINE	L2	0	3426	3285	4
chr9	20816958	20816959	chunk0200_234_1	19.04134	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	20816718	20817068	-117577649	+	MER2	DNA	TcMar-Tigger	1	345	0	4
chr9	20817867	20817868	chunk0200_237_1	17.22252	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	20817199	20819022	-117575695	-	L1MB7	LINE	L1	-15	6163	4498	4
chr9	20834076	20834077	chunk0200_242_1	89.32695	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	20833743	20834102	-117560615	+	L1ME2	LINE	L1	5353	5731	-433	4
chr9	21083625	21083626	chunk0200_247_1	13.2526	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	21083166	21083834	-117310883	-	L1ME3A	LINE	L1	-155	6018	5308	4
chr9	21345082	21345083	chunk0200_253_1	15.7875	AR_DHT_Control	chr9	21344461	21345851	-117048866	+	L1PA10	LINE	L1	3807	5224	-1107	4
chr9	21802411	21802412	chunk0200_259_1	48.8568	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	21802342	21802440	-116592277	+	MIRb	SINE	MIR	163	268	0	4
chr9	21841347	21841348	chunk0200_261_1	5.40815	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	21840245	21844752	-116549965	+	L1PB1	LINE	L1	19	4728	-2134	4
chr9	21945726	21945727	chunk0200_263_1	10.1214	AR_DHT_Control	chr9	21944540	21946881	-116447836	+	L1PREC2	LINE	L1	1	2365	-4324	4
chr9	21949169	21949170	chunk0200_264_1	14.06536	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	21949148	21949549	-116445168	-	MSTA	LTR	ERVL-MaLR	0	428	1	4
chr9	22144414	22144415	chunk0200_275_1	8.2993	AR_DHT_Control	chr9	22144058	22144969	-116249748	-	L1MC3	LINE	L1	-621	7164	6272	4
chr9	22257162	22257163	chunk0200_276_1	5.77762	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	22254827	22258344	-116136373	-	L1PA16	LINE	L1	-3660	3189	143	4
chr9	22335685	22335686	chunk0200_280_1	6.13992	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	22335305	22335758	-116058959	-	L2a	LINE	L2	-255	3132	2679	4
chr9	22884767	22884768	chunk0200_296_1	8.27376	AR_DHT_Control	chr9	22884580	22885789	-115508928	-	L1PA5	LINE	L1	-1500	4646	3438	4
chr9	22927291	22927292	chunk0200_298_1	64.1087	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	22926970	22927377	-115467340	-	L1MEi	LINE	L1	-1106	1106	630	4
chr9	22955193	22955194	chunk0200_302_1	233.8123	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	22954342	22955475	-115439242	+	L1M4	LINE	L1	3229	4406	-1740	4
chr9	22956934	22956935	chunk0200_303_1	7.7592	AR_DHT_Control	chr9	22956559	22957351	-115437366	-	L1M4	LINE	L1	-6696	821	40	4
chr9	22965073	22965074	chunk0200_304_1	11.1716	AR_DHT_Control	chr9	22964801	22965186	-115429531	-	MER57B2	LTR	ERV1	0	403	1	4
chr9	22979743	22979744	chunk0200_305_1	9.21264	AR_DHT_Control	chr9	22978898	22980183	-115414534	+	L1MC4a	LINE	L1	6542	7881	-1	4
chr9	23101171	23101172	chunk0200_306_1	11.4842	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	23100981	23101370	-115293347	+	MLT1A1	LTR	ERVL-MaLR	1	408	0	4
chr9	23141113	23141114	chunk0200_309_1	6.75651	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	23140990	23141147	-115253570	+	Tigger19a	DNA	TcMar-Tigger	33	195	-128	4
chr9	23271244	23271245	chunk0200_314_1	7.78335	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	23271158	23272599	-115122118	-	L1P2	LINE	L1	-3090	3056	1620	4
chr9	23599255	23599256	chunk0200_321_1	25.798	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	23599138	23599301	-114795416	+	MER103C	DNA	hAT-Charlie	1	155	-142	4
chr9	23638182	23638183	chunk0200_323_1	8.70654	AR_DHT_Control	chr9	23637646	23638242	-114756475	+	L2c	LINE	L2	2790	3382	-5	4
chr9	24141783	24141784	chunk0200_335_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	24141380	24141877	-114252840	-	LTR32	LTR	ERVL	-9	448	1	4
chr9	24210800	24210801	chunk0200_336_1	29.7604	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	24210609	24211529	-114183188	-	MER54A	LTR	ERVL	0	901	1	4
chr9	24297731	24297732	chunk0200_339_1	9.02033	AR_DHT_Control	chr9	24297670	24297806	-114096911	-	L2b	LINE	L2	-3	3372	3231	4
chr9	24548156	24548157	chunk0200_347_1	37.9265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	24548119	24548268	-113846449	-	L2c	LINE	L2	-89	3298	3140	4
chr9	25452969	25452970	chunk0200_352_1	79.9687	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	25452940	25453139	-112941578	-	Tigger17c	DNA	TcMar-Tigger	-979	209	1	4
chr9	25472532	25472533	chunk0200_355_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	25470071	25473165	-112921552	-	L1PA11	LINE	L1	-3685	3896	11	4
chr9	25646879	25646880	chunk0200_360_1	7.42871	AR_DHT_Control	chr9	25646804	25647031	-112747686	-	MIRb	SINE	MIR	-33	235	15	4
chr9	25674250	25674251	chunk0200_361_1	22.95172	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	25674177	25674393	-112720324	+	HERVH-int	LTR	ERV1	5600	5819	-1894	4
chr9	25699956	25699957	chunk0200_365_1	26.3707	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	25699669	25700037	-112694680	+	L2a	LINE	L2	2978	3404	-22	4
chr9	25828298	25828299	chunk0200_368_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	25826393	25828815	-112565902	-	L1MA2	LINE	L1	-5005	2560	15	4
chr9	26324005	26324006	chunk0200_370_1	9.13774	AR_DHT_Control	chr9	26323631	26324058	-112070659	-	LTR85c	LTR	Gypsy?	-25	798	382	4
chr9	26352421	26352422	chunk0200_375_1	8.53045	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	26349568	26353475	-112041242	+	L1PB1	LINE	L1	2973	6859	-8	4
chr9	26408642	26408643	chunk0200_376_1	10.1791	AR_DHT_Control	chr9	26408460	26408764	-111985953	+	L2c	LINE	L2	2737	3077	-342	4
chr9	26855649	26855650	chunk0200_389_1	46.5294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	26855624	26855687	-111539030	+	L3	LINE	CR1	3450	3512	-587	4
chr9	27055033	27055034	chunk0200_393_1	6.33484	AR_DHT_Control	chr9	27054576	27055198	-111339519	+	Tigger17a	DNA	TcMar-Tigger	7	653	-1	4
chr9	27289835	27289836	chunk0200_403_1	19.21095	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	27289831	27290483	-111104234	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	4
chr9	27332745	27332746	chunk0200_405_1	13.81263	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	27332658	27332880	-111061837	-	MIRb	SINE	MIR	-9	259	12	4
chr9	27436475	27436476	chunk0200_412_1	55.13966	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	27436395	27436530	-110958187	+	L2b	LINE	L2	3292	3419	-7	4
chr9	27652819	27652820	chunk0200_421_1	15.3969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	27652569	27653792	-110740925	+	Tigger3b	DNA	TcMar-Tigger	1	1231	0	4
chr9	28713384	28713385	chunk0200_423_1	8.27376	AR_DHT_Control	chr9	28713343	28713532	-109681185	+	MLT1J1	LTR	ERVL-MaLR	1	193	-251	4
chr9	29449041	29449042	chunk0200_429_1	60.9689	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	29448961	29449469	-108945248	+	L2c	LINE	L2	2869	3387	0	4
chr9	29637983	29637984	chunk0200_430_1	4.42675	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	29637978	29638169	-108756548	+	MSTD-int	LTR	ERVL-MaLR	1504	1721	-14	4
chr9	29668855	29668856	chunk0200_431_1	9.96971	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	29668680	29669109	-108725608	-	L1ME1	LINE	L1	-447	5732	5294	4
chr9	29790899	29790900	chunk0200_433_1	25.9756	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	29790247	29791397	-108603320	+	L1ME2	LINE	L1	4939	6164	0	4
chr9	30482657	30482658	chunk0200_440_1	36.3473	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	30481474	30483697	-107911020	+	L1PREC2	LINE	L1	3050	5343	-803	4
chr9	30490277	30490278	chunk0200_441_1	5.6425	AR_DHT_Control	chr9	30490133	30490312	-107904405	-	L1PA16	LINE	L1	-124	6042	5862	4
chr9	30530933	30530934	chunk0200_442_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	30530659	30531605	-107863112	-	LTR1D	LTR	ERV1	-1	974	1	4
chr9	30553870	30553871	chunk0200_444_1	58.9317	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	30553814	30554380	-107840337	+	L1M5	LINE	L1	5030	5662	-500	4
chr9	31004247	31004248	chunk0200_446_1	46.8258	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	31003517	31004287	-107390430	-	L1MD1	LINE	L1	0	6242	5460	4
chr9	31776639	31776640	chunk0200_458_1	23.04662	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	31771654	31778849	-106615868	+	HERVK11-int	LTR	ERVK	1	7214	-739	4
chr9	31869711	31869712	chunk0200_459_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	31865899	31870095	-106524622	-	L1MA5A	LINE	L1	-2437	5125	718	4
chr9	31908299	31908300	chunk0200_464_1	35.57698	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	31908083	31908314	-106486403	-	L1MD2	LINE	L1	-5055	1585	1363	4
chr9	31909163	31909164	chunk0200_465_1	8.78287	AR_DHT_Control	chr9	31908994	31909191	-106485526	+	HERVK14-int	LTR	ERVK	5440	5637	-459	4
chr9	32003695	32003696	chunk0201_3_1	55.5104	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	32003581	32004088	-106390629	+	Helitron1Na_Mam	RC	Helitron	577	1062	0	4
chr9	32016166	32016167	chunk0201_5_1	6.88185	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	32015752	32016468	-106378249	-	MER52A	LTR	ERV1	0	1755	1028	4
chr9	32017354	32017355	chunk0201_6_1	44.4434	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	32017113	32017441	-106377276	-	L1MEd	LINE	L1	-6325	778	460	4
chr9	32128600	32128601	chunk0201_7_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	32128252	32133068	-106261649	+	L1PA10	LINE	L1	2	4864	-1597	4
chr9	32947971	32947972	chunk0201_12_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	32947460	32948208	-105446509	-	L1M5	LINE	L1	-1712	4434	3710	4
chr9	32953957	32953958	chunk0201_13_1	6.6093	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	32953461	32954013	-105440704	-	MER41D	LTR	ERV1	-2	555	1	4
chr9	33013289	33013290	chunk0201_14_1	9.14794	AR_DHT_Control	chr9	33013149	33013333	-105381384	-	MIR	SINE	MIR	-2	260	63	4
chr9	33070639	33070640	chunk0201_17_1	39.49857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	33070147	33071153	-105323564	+	L1MA3	LINE	L1	5261	6298	-7	4
chr9	33234799	33234800	chunk0201_26_1	8.18946	AR_DHT_Control	chr9	33234655	33235061	-105159656	+	L2a	LINE	L2	2942	3421	-5	4
chr9	33329241	33329242	chunk0201_30_1	42.7149	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	33328899	33329590	-105065127	-	MER77B	LTR	ERVL	-6	694	1	4
chr9	33431595	33431596	chunk0201_36_1	76.8245	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	33431529	33431876	-104962841	+	MLT1K	LTR	ERVL-MaLR	216	593	-2	4
chr9	33445347	33445348	chunk0201_38_1	15.85405	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	33445169	33445406	-104949311	-	MamRep38	DNA	hAT	-44	251	3	4
chr9	33739976	33739977	chunk0201_47_1	8.27376	AR_DHT_Control	chr9	33739967	33740522	-104654195	+	L1MEc	LINE	L1	776	1360	-5040	4
chr9	33820110	33820111	chunk0201_49_1	13.35466	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	33820093	33820128	-104574589	+	(AAAAC)n	Simple_repeat	Simple_repeat	1	35	0	4
chr9	33878845	33878846	chunk0201_54_1	332.4989	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	33878633	33878983	-104515734	-	MER83	LTR	ERV1	-81	367	1	4
chr9	34035928	34035929	chunk0201_65_1	66.52056	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	34035913	34036025	-104358692	+	AluJb	SINE	Alu	190	305	-7	4
chr9	34163719	34163720	chunk0201_71_1	9.21264	AR_DHT_Control	chr9	34163314	34163957	-104230760	-	ERV3-16A3_I-int	LTR	ERVL	-3322	1904	1269	4
chr9	34185896	34185897	chunk0201_72_1	184.5401	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	34185872	34186058	-104208659	-	MIRb	SINE	MIR	-74	194	2	4
chr9	34247888	34247889	chunk0201_73_1	6.40219	AR_DHT_Control	chr9	34247764	34248016	-104146701	-	L1ME3G	LINE	L1	-335	5789	5604	4
chr9	34258472	34258473	chunk0201_75_1	99.2491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	34258186	34258490	-104136227	+	AluJo	SINE	Alu	1	303	-9	4
chr9	34276010	34276011	chunk0201_76_1	11.9502	AR_DHT_Control	chr9	34275956	34276070	-104118647	-	MIRb	SINE	MIR	-140	122	6	4
chr9	34515585	34515586	chunk0201_82_1	5.80396	AR_DHT_Control	chr9	34515499	34515952	-103878765	+	L1MB8	LINE	L1	5659	6183	-1	4
chr9	34546074	34546075	chunk0201_83_1	5.14476	AR_DHT_Control	chr9	34544805	34546147	-103848570	-	HAL1b	LINE	L1	-1065	1356	3	4
chr9	34736721	34736722	chunk0201_94_1	29.40203	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	34736605	34736945	-103657772	+	L1MCc	LINE	L1	1931	2283	-4845	4
chr9	34746616	34746617	chunk0201_98_1	6.37684	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	34746328	34746657	-103648060	+	L1ME3A	LINE	L1	3657	4006	-2140	4
chr9	34773577	34773578	chunk0201_100_1	127.53067	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	34773289	34773630	-103621087	+	L1MC3	LINE	L1	6724	7063	-722	4
chr9	34812145	34812146	chunk0201_102_1	31.60431	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	34812089	34812225	-103582492	+	FLAM_A	SINE	Alu	1	132	-10	4
chr9	34956213	34956214	chunk0201_103_1	19.8103	AR_DHT_Control	chr9	34956062	34956269	-103438448	+	L2c	LINE	L2	3182	3362	-13	4
chr9	35127705	35127706	chunk0201_111_1	26.79746	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	35127610	35127940	-103266777	+	MER4-int	LTR	ERV1	499	794	-4221	4
chr9	35466257	35466258	chunk0201_126_1	7.24914	AR_DHT_Control	chr9	35465943	35466572	-102928145	+	L1ME1	LINE	L1	5529	6294	-40	4
chr9	35790365	35790366	chunk0201_140_1	197.9466	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	35790329	35790416	-102604301	+	L2c	LINE	L2	3292	3370	-17	4
chr9	35795957	35795958	chunk0201_143_1	47.3639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	35795877	35796095	-102598622	-	L2a	LINE	L2	-4	3422	3193	4
chr9	35845035	35845036	chunk0201_147_1	20.81282	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	35844896	35845295	-102549422	+	L4_A_Mam	LINE	RTE-X	4391	4824	-166	4
chr9	35919421	35919422	chunk0201_150_1	84.4828	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	35919388	35919493	-102475224	+	HAL1ME	LINE	L1	2336	2452	-13	4
chr9	35967149	35967150	chunk0201_153_1	20.39665	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	35966641	35967519	-102427198	-	L1MD2	LINE	L1	-212	6147	5272	4
chr9	35969487	35969488	chunk0201_155_1	30.4061	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	35969081	35969582	-102425135	-	L1MA5	LINE	L1	-841	5302	4798	4
chr9	36029892	36029893	chunk0201_160_1	13.3531	AR_DHT_Control	chr9	36029524	36030073	-102364644	+	Charlie15b	DNA	hAT-Charlie	42	572	-489	4
chr9	36081218	36081219	chunk0201_166_1	14.6324	AR_DHT_Control	chr9	36080962	36081253	-102313464	-	L2c	LINE	L2	-97	3290	2990	4
chr9	36099933	36099934	chunk0201_169_1	218.9904	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	36099784	36100005	-102294712	+	L1ME2	LINE	L1	5934	6150	-14	4
chr9	36119644	36119645	chunk0201_172_1	8.08101	AR_DHT_Control	chr9	36119600	36119814	-102274903	-	L2a	LINE	L2	0	3426	3206	4
chr9	36238786	36238787	chunk0201_174_1	8.27376	AR_DHT_Control	chr9	36237645	36239461	-102155256	-	L1PA17	LINE	L1	-3	6163	4489	4
chr9	36282491	36282492	chunk0201_182_1	42.2084	AR_DHT_Control	chr9	36282451	36282850	-102111867	-	LTR75	LTR	ERVL	0	562	124	4
chr9	36316710	36316711	chunk0201_183_1	14.76668	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	36316336	36316800	-102077917	+	Charlie4a	DNA	hAT-Charlie	17	503	-5	4
chr9	36420106	36420107	chunk0201_190_1	102.5785	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	36420083	36420240	-101974477	+	MIR	SINE	MIR	21	203	-27	4
chr9	36526992	36526993	chunk0201_193_1	31.515	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	36526953	36527161	-101867556	+	L1M4	LINE	L1	2894	3102	-3044	4
chr9	36530555	36530556	chunk0201_195_1	7.80475	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	36530473	36530935	-101863782	+	MLT1K	LTR	ERVL-MaLR	125	585	-10	4
chr9	36567255	36567256	chunk0201_197_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	36567114	36567547	-101827170	+	L2c	LINE	L2	2919	3387	0	4
chr9	36621509	36621510	chunk0201_198_1	6.18182	AR_DHT_Control	chr9	36621468	36621590	-101773127	-	MIR	SINE	MIR	-110	152	29	4
chr9	36755977	36755978	chunk0201_199_1	9.46036	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	36755897	36756068	-101638649	-	MER53	DNA	hAT	-17	176	2	4
chr9	37155881	37155882	chunk0201_207_1	48.0093	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	37155863	37155970	-101238747	-	L2c	LINE	L2	-6	3381	3280	4
chr9	37202434	37202435	chunk0201_211_1	56.49369	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	37202326	37202452	-101192265	-	L4_C_Mam	LINE	RTE-X	-171	4967	4843	4
chr9	37230234	37230235	chunk0201_215_1	47.7614	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	37229325	37230423	-101164294	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	29	4
chr9	37256580	37256581	chunk0201_216_1	4.93365	AR_DHT_Control	chr9	37256285	37256650	-101138067	+	Charlie1a	DNA	hAT-Charlie	3	371	-1084	4
chr9	37260266	37260267	chunk0201_217_1	6.09694	AR_DHT_Control	chr9	37259108	37260579	-101134138	-	MER45R	DNA	hAT-Tip100	0	1581	1	4
chr9	37373397	37373398	chunk0201_220_1	6.05516	AR_DHT_Control	chr9	37373126	37373413	-101021304	+	AluJb	SINE	Alu	1	293	-19	4
chr9	37445162	37445163	chunk0201_223_1	22.761	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	37444610	37445370	-100949347	+	HAL1	LINE	L1	1480	2341	-166	4
chr9	37452810	37452811	chunk0201_225_1	132.48418	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	37452519	37452985	-100941732	-	LTR16A2	LTR	ERVL	0	495	1	4
chr9	37576740	37576741	chunk0201_231_1	7.12934	AR_DHT_Control	chr9	37576486	37576741	-100817976	+	L3	LINE	CR1	3736	3994	-105	4
chr9	37782789	37782790	chunk0201_241_1	144.5463	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	37782738	37783129	-100611588	-	L2c	LINE	L2	0	3387	2956	4
chr9	38023268	38023269	chunk0201_253_1	6.94497	AR_DHT_Control	chr9	38023167	38023404	-100371313	+	MIRc	SINE	MIR	1	229	-39	4
chr9	38178565	38178566	chunk0201_256_1	11.7796	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	38178478	38178906	-100215811	-	MLT2D	LTR	ERVL	-6	408	1	4
chr9	38297741	38297742	chunk0201_257_1	10.3253	AR_DHT_Control	chr9	38297684	38298130	-100096587	-	L2c	LINE	L2	-2	3385	2980	4
chr9	38303203	38303204	chunk0201_259_1	13.24468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	38303076	38303428	-100091289	-	Tigger1	DNA	TcMar-Tigger	0	2418	2060	4
chr9	38362926	38362927	chunk0201_260_1	8.36735	AR_DHT_Control	chr9	38362672	38363011	-100031706	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	4
chr9	38495458	38495459	chunk0201_264_1	94.94549	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	38495094	38495591	-99899126	-	MLT2B4	LTR	ERVL	-62	494	1	4
chr9	38515197	38515198	chunk0201_266_1	34.8404	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	38515031	38515372	-99879345	-	MER57B2	LTR	ERV1	0	403	3	4
chr9	38579842	38579843	chunk0201_268_1	6.48643	AR_DHT_Control	chr9	38579009	38580120	-99814597	+	L1MA5	LINE	L1	4805	5946	-354	4
chr9	38633270	38633271	chunk0201_270_1	41.0643	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	38633223	38633282	-99761435	+	(TTTG)n	Simple_repeat	Simple_repeat	1	63	0	4
chr9	38634135	38634136	chunk0201_271_1	16.91034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	38633671	38634644	-99760073	-	L1MD2	LINE	L1	-2	6357	5346	4
chr9	38639353	38639354	chunk0201_273_1	12.6172	AR_DHT_Control	chr9	38639334	38639800	-99754917	+	Tigger3	DNA	TcMar-Tigger	2560	3028	-1	4
chr9	38703007	38703008	chunk0201_279_1	81.9344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	38702961	38703151	-99691566	+	MER20	DNA	hAT-Charlie	1	219	0	4
chr9	41042439	41042440	chunk0201_292_1	95.8373	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	41042149	41042861	-97351856	+	L1ME1	LINE	L1	5460	6178	-1	4
chr9	41121768	41121769	chunk0201_295_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	41121749	41122032	-97272685	+	L1MC5	LINE	L1	8771	9066	-238	4
chr9	41229497	41229498	chunk0201_299_1	146.80857	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr9	41229378	41230391	-97164326	+	(TG)n	Simple_repeat	Simple_repeat	1	1071	0	4
chr9	42433673	42433674	chunk0201_307_1	76.6034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	42433428	42433871	-95960846	-	MLT2B4	LTR	ERVL	-41	479	1	4
chr9	42941019	42941020	chunk0201_309_1	17.6003	AR_DHT_Control	chr9	42940708	42942285	-95452432	+	MSTA-int	LTR	ERVL-MaLR	28	1631	0	4
chr9	43319469	43319470	chunk0201_314_1	29.8929	AR_DHT_Control;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	43319379	43322579	-95072138	+	(TTCGA)n	Simple_repeat	Simple_repeat	2	3280	0	4
chr9	43321318	43321319	chunk0201_316_1	18.0019	AR_DHT_Control	chr9	43319379	43322579	-95072138	+	(TTCGA)n	Simple_repeat	Simple_repeat	2	3280	0	4
chr9	43346984	43346985	chunk0201_317_1	7.83042	AR_DHT_Control	chr9	43345451	43347142	-95047575	+	(TCGAT)n	Simple_repeat	Simple_repeat	2	1730	0	4
chr9	62807928	62807929	chunk0201_319_1	66.6228	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	62807905	62807989	-75586728	+	MER103C	DNA	hAT-Charlie	83	165	-132	4
chr9	63807685	63807686	chunk0201_326_1	20.39164	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	63807588	63807724	-74586993	-	MER103C	DNA	hAT-Charlie	-80	217	83	4
chr9	63823731	63823732	chunk0201_333_1	130.7824	SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	63823015	63823908	-74570809	+	(CA)n	Simple_repeat	Simple_repeat	1	933	0	4
chr9	64061301	64061302	chunk0201_337_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	64061098	64061800	-74332917	-	L1MB7	LINE	L1	-165	6019	5317	4
chr9	64118347	64118348	chunk0201_339_1	80.1228	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	64118214	64118488	-74276229	+	L1MB7	LINE	L1	5903	6184	0	4
chr9	65376663	65376664	chunk0201_341_1	46.8142	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	65376649	65377391	-73017326	+	L1MDb	LINE	L1	976	1734	-4899	4
chr9	66608338	66608339	chunk0201_346_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	66608296	66608552	-71786165	-	L1MEg	LINE	L1	-4276	1808	1527	4
chr9	66699692	66699693	chunk0201_347_1	38.5672	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	66699444	66699874	-71694843	+	MLT2B4	LTR	ERVL	1	511	-45	4
chr9	67733085	67733086	chunk0201_349_1	36.327	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	67732454	67733197	-70661520	-	L1MDb	LINE	L1	-4899	1734	976	4
chr9	68389715	68389716	chunk0201_351_1	39.3767	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	68389227	68389935	-70004782	-	L1ME1	LINE	L1	-1	6178	5460	4
chr9	68437956	68437957	chunk0201_354_1	6.73207	AR_DHT_Control	chr9	68437714	68437977	-69956740	+	MER102c	DNA	hAT-Charlie	70	315	-16	4
chr9	68822793	68822794	chunk0201_378_1	24.75008	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	68822787	68823281	-69571436	-	MLT1D	LTR	ERVL-MaLR	-4	501	16	4
chr9	69123001	69123002	chunk0201_392_1	7.0729	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	69122999	69123107	-69271610	+	MER5A1	DNA	hAT-Charlie	41	166	0	4
chr9	69169169	69169170	chunk0201_399_1	8.76676	AR_DHT_Control	chr9	69169162	69169282	-69225435	+	L2c	LINE	L2	3258	3381	-6	4
chr9	69215119	69215120	chunk0201_401_1	34.87016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	69214971	69215335	-69179382	+	L1PA17	LINE	L1	5798	6165	-1	4
chr9	69235839	69235840	chunk0201_402_1	5.85263	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	69235621	69235848	-69158869	-	MLT2B4	LTR	ERVL	-326	230	1	4
chr9	69347711	69347712	chunk0201_407_1	118.7669	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	69347464	69347830	-69046887	+	LTR78	LTR	ERV1	937	1304	0	4
chr9	69564798	69564799	chunk0201_412_1	157.8501	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	69564619	69564922	-68829795	+	L1M3	LINE	L1	5439	5747	-433	4
chr9	69594290	69594291	chunk0201_415_1	8.24382	AR_DHT_Control	chr9	69594203	69594352	-68800365	-	MER5A1	DNA	hAT-Charlie	-3	163	1	4
chr9	69610280	69610281	chunk0201_419_1	46.0688	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	69610035	69610337	-68784380	+	AluJr4	SINE	Alu	1	300	-12	4
chr9	69645598	69645599	chunk0201_420_1	7.62275	AR_DHT_Control	chr9	69645404	69645966	-68748751	+	MLT1N2	LTR	ERVL-MaLR	9	562	0	4
chr9	69653465	69653466	chunk0201_421_1	9.25776	AR_DHT_Control	chr9	69653031	69653825	-68740892	+	L1M1	LINE	L1	3636	4426	-3136	4
chr9	69679093	69679094	chunk0201_423_1	20.89739	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	69679020	69679139	-68715578	-	MER47A	DNA	TcMar-Tigger	-254	112	1	4
chr9	69861268	69861269	chunk0201_426_1	88.20402	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	69860536	69861300	-68533417	-	Tigger3b	DNA	TcMar-Tigger	-457	774	2	4
chr9	69942850	69942851	chunk0201_429_1	12.6172	AR_DHT_Control	chr9	69942327	69944094	-68450623	+	L1MB8	LINE	L1	5243	7036	-2	4
chr9	69997050	69997051	chunk0201_431_1	60.4572	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	69997031	69997163	-68397554	-	MIR3	SINE	MIR	-2	206	64	4
chr9	70038261	70038262	chunk0201_433_1	31.1903	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chr9	70038165	70038638	-68356079	+	(TGGAA)n	Simple_repeat	Simple_repeat	1	482	0	4
chr9	70127152	70127153	chunk0201_437_1	8.08101	AR_DHT_Control	chr9	70127125	70127169	-68267548	+	Penelope1_Vert	LINE	Penelope	714	759	-328	4
chr9	70141907	70141908	chunk0201_438_1	56.5635	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	70141518	70142094	-68252623	-	MER34A	LTR	ERV1	0	571	2	4
chr9	70438791	70438792	chunk0202_17_1	9.76623	AR_DHT_Control	chr9	70438445	70438975	-67955742	-	L2b	LINE	L2	0	3375	2813	4
chr9	70574708	70574709	chunk0202_26_1	11.4187	AR_DHT_Control	chr9	70574139	70574728	-67819989	+	L2b	LINE	L2	2809	3375	0	4
chr9	71191292	71191293	chunk0202_41_1	96.6831	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71191211	71191293	-67203424	+	L2b	LINE	L2	3287	3370	-5	4
chr9	71382303	71382304	chunk0202_55_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71382289	71382477	-67012240	-	MIRc	SINE	MIR	-13	255	28	4
chr9	71565755	71565756	chunk0202_56_1	19.31656	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71565718	71566179	-66828538	+	MER4C	LTR	ERV1	2	465	0	4
chr9	71652750	71652751	chunk0202_58_1	8.21408	AR_DHT_Control	chr9	71652511	71652883	-66741834	+	MLT2D	LTR	ERVL	1	371	-43	4
chr9	71654369	71654370	chunk0202_59_1	16.604	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71654311	71654478	-66740239	+	LTR106_Mam	LTR	LTR	265	430	-278	4
chr9	71654870	71654871	chunk0202_61_1	25.4134	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71654752	71655024	-66739693	+	LTR106_Mam	LTR	LTR	431	701	-7	4
chr9	71723185	71723186	chunk0202_67_1	24.18528	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	71722714	71723232	-66671485	-	L2c	LINE	L2	0	3387	2916	4
chr9	71791799	71791800	chunk0202_77_1	51.46464	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71791686	71792225	-66602492	-	L2a	LINE	L2	0	3426	2877	4
chr9	71800044	71800045	chunk0202_79_1	27.2046	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	71799956	71800154	-66594563	+	MIRc	SINE	MIR	18	233	-35	4
chr9	72009887	72009888	chunk0202_88_1	12.0334	AR_DHT_Control	chr9	72009864	72010164	-66384553	-	MER4A	LTR	ERV1	0	664	368	4
chr9	72293375	72293376	chunk0202_91_1	50.6945	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	72293321	72293393	-66101324	-	L2a	LINE	L2	-25	3401	3331	4
chr9	72441132	72441133	chunk0202_104_1	9.62915	AR_DHT_Control	chr9	72440947	72441228	-65953489	+	L2c	LINE	L2	3096	3387	0	4
chr9	72574103	72574104	chunk0202_111_1	8.90491	AR_DHT_Control	chr9	72573786	72574132	-65820585	-	L1PA14	LINE	L1	0	6161	5815	4
chr9	72583670	72583671	chunk0202_113_1	10.0617	AR_DHT_Control	chr9	72583528	72583800	-65810917	+	L4_B_Mam	LINE	RTE-X	4564	4834	-107	4
chr9	72763418	72763419	chunk0202_115_1	67.4273	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	72763277	72763950	-65630767	-	L2c	LINE	L2	-1	3425	2697	4
chr9	72769490	72769491	chunk0202_116_1	19.1252	AR_DHT_Control	chr9	72769486	72769637	-65625080	-	LTR79	LTR	ERVL	-339	188	18	4
chr9	73148519	73148520	chunk0202_127_1	94.4403	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	73148144	73148605	-65246112	-	L1MC2	LINE	L1	-318	6026	5560	4
chr9	73225330	73225331	chunk0202_133_1	5.9729	AR_DHT_Control	chr9	73223539	73225945	-65168772	+	L1PA13	LINE	L1	1013	3447	-3319	4
chr9	73335537	73335538	chunk0202_136_1	35.98885	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73335168	73335785	-65058932	-	L1MC4	LINE	L1	-4996	1219	578	4
chr9	73337349	73337350	chunk0202_138_1	127.5172	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73336885	73337672	-65057045	+	L1PA8	LINE	L1	5436	6172	0	4
chr9	73431464	73431465	chunk0202_141_1	6.75904	AR_DHT_Control	chr9	73431011	73431770	-64962947	-	L1MCa	LINE	L1	-5332	1419	558	4
chr9	73454917	73454918	chunk0202_142_1	30.7462	AR_DHT_Control	chr9	73454724	73455146	-64939571	+	MLT1B	LTR	ERVL-MaLR	1	390	0	4
chr9	73484607	73484608	chunk0202_143_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73484548	73484831	-64909886	+	L1ME3B	LINE	L1	6094	6403	-230	4
chr9	73493024	73493025	chunk0202_144_1	17.0863	AR_DHT_Control	chr9	73491732	73493885	-64900832	-	Tigger2	DNA	TcMar-Tigger	0	2718	545	4
chr9	73510166	73510167	chunk0202_145_1	7.63982	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73510126	73510210	-64884507	+	L1ME2	LINE	L1	6073	6156	-8	4
chr9	73543833	73543834	chunk0202_149_1	25.8712	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73543786	73543964	-64850753	-	L2c	LINE	L2	-1	3425	3224	4
chr9	73553455	73553456	chunk0202_150_1	103.5216	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73553432	73553502	-64841215	+	(TGTTT)n	Simple_repeat	Simple_repeat	1	71	0	4
chr9	73632153	73632154	chunk0202_154_1	26.6913	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73632136	73632332	-64762385	+	MIR	SINE	MIR	52	262	0	4
chr9	73690123	73690124	chunk0202_156_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	73690018	73690563	-64704154	-	MLT1H1	LTR	ERVL-MaLR	-9	546	1	4
chr9	73701649	73701650	chunk0202_158_1	18.7748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73701162	73702303	-64692414	+	L1MB8	LINE	L1	14	1158	-6359	4
chr9	73739022	73739023	chunk0202_160_1	31.26976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	73737911	73739068	-64655649	-	L1MC1	LINE	L1	0	6333	5186	4
chr9	73751789	73751790	chunk0202_162_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	73751058	73752208	-64642509	-	L1PA16	LINE	L1	0	1175	3	4
chr9	74357884	74357885	chunk0202_181_1	18.50934	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	74357870	74357962	-64036755	+	MIR1_Amn	SINE	MIR	92	192	-38	4
chr9	74364880	74364881	chunk0202_183_1	11.50896	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	74364837	74365443	-64029274	-	L1PA10	LINE	L1	0	6168	5561	4
chr9	74907023	74907024	chunk0202_192_1	20.6798	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	74906970	74907042	-63487675	+	L1ME5	LINE	L1	6105	6178	-16	4
chr9	75124529	75124530	chunk0202_196_1	14.2975	AR_DHT_Control	chr9	75124137	75124553	-63270164	-	L1MA2	LINE	L1	0	6304	5878	4
chr9	75230147	75230148	chunk0202_197_1	8.90508	AR_DHT_Control	chr9	75229987	75230332	-63164385	+	LTR18C	LTR	ERVL	1	345	0	4
chr9	75231162	75231163	chunk0202_198_1	9.26283	AR_DHT_Control	chr9	75230994	75231197	-63163520	+	MIRc	SINE	MIR	20	209	-59	4
chr9	75433183	75433184	chunk0202_200_1	53.57163	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	75433111	75433201	-62961516	+	MIRc	SINE	MIR	19	119	-149	4
chr9	75501101	75501102	chunk0202_203_1	16.5172	AR_DHT_Control	chr9	75500992	75501995	-62892722	-	L1PA15	LINE	L1	-12	6153	5162	4
chr9	75538926	75538927	chunk0202_204_1	6.58746	AR_DHT_Control	chr9	75538877	75539176	-62855541	-	AluJb	SINE	Alu	-1	311	13	4
chr9	75560813	75560814	chunk0202_205_1	11.1716	AR_DHT_Control	chr9	75559464	75562158	-62832559	-	L1PA15	LINE	L1	-10	6924	4181	4
chr9	75820946	75820947	chunk0202_208_1	55.3505	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	75816770	75822219	-62572498	-	L1PA7	LINE	L1	-756	5705	1	4
chr9	76097655	76097656	chunk0202_212_1	38.53823	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	76097557	76097793	-62296924	+	MIR	SINE	MIR	2	263	-5	4
chr9	76497933	76497934	chunk0202_231_1	19.3746	AR_DHT_Control	chr9	76497845	76498466	-61896251	-	L1MB7	LINE	L1	-7	6675	6008	4
chr9	76521579	76521580	chunk0202_234_1	16.1535	AR_DHT_Control	chr9	76520983	76521725	-61872992	-	Tigger17b	DNA	TcMar-Tigger	-7	1066	294	4
chr9	76545312	76545313	chunk0202_236_1	26.58903	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	76545255	76545642	-61849075	+	MER57B2	LTR	ERV1	1	403	0	4
chr9	76634474	76634475	chunk0202_239_1	7.10486	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	76634345	76634765	-61759952	+	MER57C2	LTR	ERV1	8	434	0	4
chr9	76730080	76730081	chunk0202_245_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	76729580	76730316	-61664401	-	Tigger13a	DNA	TcMar-Tigger	-14	757	1	4
chr9	76793330	76793331	chunk0202_246_1	103.12266	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	76793289	76793370	-61601347	+	X7C_LINE	LINE	CR1	64	142	-94	4
chr9	76825478	76825479	chunk0202_253_1	4.47946	AR_DHT_Control	chr9	76825350	76825496	-61569221	+	LTR16C	LTR	ERVL	241	436	-53	4
chr9	76827999	76828000	chunk0202_254_1	5.10203	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	76827934	76828575	-61566142	-	L2c	LINE	L2	0	3387	2724	4
chr9	76829640	76829641	chunk0202_255_1	23.6131	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	76829448	76829649	-61565068	+	MER58A	DNA	hAT-Charlie	1	202	-22	4
chr9	76879480	76879481	chunk0202_259_1	14.30883	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	76879413	76879787	-61514930	-	L2a	LINE	L2	-6	3420	3020	4
chr9	77063952	77063953	chunk0202_269_1	70.0541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	77063425	77064154	-61330563	+	Tigger2b_Pri	DNA	TcMar-Tigger	59	777	-291	4
chr9	77076633	77076634	chunk0202_271_1	47.1324	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	77076550	77076816	-61317901	-	L1MC5a	LINE	L1	-467	2310	2114	4
chr9	77180401	77180402	chunk0202_279_1	15.16106	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	77180308	77180872	-61213845	-	L1MD	LINE	L1	-840	5306	4699	4
chr9	77272109	77272110	chunk0202_280_1	11.022	AR_DHT_Control	chr9	77272076	77272528	-61122189	+	L1ME3Cz	LINE	L1	5492	5817	-356	4
chr9	77277941	77277942	chunk0202_281_1	112.2903	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77277259	77277956	-61116761	-	L1MC1	LINE	L1	0	6333	5618	4
chr9	77392557	77392558	chunk0202_284_1	39.11273	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	77392556	77392709	-61002008	-	Tigger1	DNA	TcMar-Tigger	0	2418	2249	4
chr9	77466771	77466772	chunk0202_287_1	16.26733	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77465909	77467000	-60927717	-	L1M4a2	LINE	L1	-4320	2465	1334	4
chr9	77488792	77488793	chunk0202_289_1	42.0482	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77488065	77489501	-60905216	+	L1M3f	LINE	L1	1827	3293	-4848	4
chr9	77898913	77898914	chunk0202_301_1	14.39694	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	77898716	77899070	-60495647	-	L1ME3G	LINE	L1	-240	684	446	4
chr9	77945092	77945093	chunk0202_303_1	18.7851	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77944910	77945186	-60449531	+	Tigger19b	DNA	TcMar-Tigger	211	505	-45	4
chr9	77966094	77966095	chunk0202_305_1	32.8319	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	77965367	77966353	-60428364	+	L1ME1	LINE	L1	5310	6352	0	4
chr9	78003907	78003908	chunk0202_307_1	133.7629	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	78003906	78004045	-60390672	-	L2c	LINE	L2	0	3387	3241	4
chr9	78177383	78177384	chunk0202_313_1	5.32898	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	78177023	78177551	-60217166	-	L1M5	LINE	L1	-2161	3985	3464	4
chr9	78227798	78227799	chunk0202_314_1	6.67115	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	78227717	78227908	-60166809	-	L1MB8	LINE	L1	-3409	3597	3420	4
chr9	78258467	78258468	chunk0202_318_1	7.83042	AR_DHT_Control	chr9	78258327	78258533	-60136184	+	HAL1ME	LINE	L1	2091	2316	-149	4
chr9	78260031	78260032	chunk0202_319_1	8.13469	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	78259968	78260087	-60134630	-	L2a	LINE	L2	-1	3425	3296	4
chr9	78272924	78272925	chunk0202_320_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	78272647	78273046	-60121671	-	MLT1I	LTR	ERVL-MaLR	0	411	5	4
chr9	78296419	78296420	chunk0202_321_1	6.62784	AR_DHT_Control	chr9	78296324	78296434	-60098283	-	MIR3	SINE	MIR	-6	202	95	4
chr9	78358463	78358464	chunk0202_324_1	5.20246	AR_DHT_Control	chr9	78357008	78358669	-60036048	+	MER52A	LTR	ERV1	1	1755	0	4
chr9	78924008	78924009	chunk0202_336_1	9.9433	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	78923814	78925156	-59469561	+	MER89-int	LTR	ERV1	1641	3731	-3070	4
chr9	79154566	79154567	chunk0202_338_1	32.4341	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	79154507	79154731	-59239986	+	L2c	LINE	L2	3164	3386	-1	4
chr9	79451487	79451488	chunk0202_340_1	20.63775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	79450991	79451870	-58942847	-	L1MC3	LINE	L1	-1533	6670	5760	4
chr9	79535517	79535518	chunk0202_344_1	6.83133	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	79535420	79535886	-58858831	+	LTR40a	LTR	ERVL	54	519	0	4
chr9	79736210	79736211	chunk0202_349_1	9.30518	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	79736145	79736226	-58658491	-	L2	LINE	L2	-845	2574	2493	4
chr9	79748499	79748500	chunk0202_350_1	5.24053	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	79748408	79748585	-58646132	-	L2a	LINE	L2	0	3426	3239	4
chr9	79782495	79782496	chunk0202_351_1	7.36432	AR_DHT_Control	chr9	79782227	79782768	-58611949	+	LTR16E2	LTR	ERVL	1	568	0	4
chr9	80335300	80335301	chunk0202_361_1	19.4778	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	80333959	80336656	-58058061	+	L1MC1	LINE	L1	3847	6507	-1	4
chr9	80392038	80392039	chunk0202_366_1	5.40567	AR_DHT_Control	chr9	80391940	80392378	-58002339	-	Tigger3b	DNA	TcMar-Tigger	-1	1230	794	4
chr9	80518241	80518242	chunk0202_368_1	26.08767	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	80513438	80518583	-57876134	-	L1PA11	LINE	L1	-4	6355	1124	4
chr9	80567411	80567412	chunk0202_371_1	82.9039	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	80567133	80568399	-57826318	-	L1MB7	LINE	L1	-17	6167	4844	4
chr9	80602447	80602448	chunk0202_372_1	5.41601	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	80602289	80602897	-57791820	-	MER92B	LTR	ERV1	-8	628	1	4
chr9	80821842	80821843	chunk0202_379_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	80821374	80822199	-57572518	+	L1PA13	LINE	L1	6	859	-6008	4
chr9	81122375	81122376	chunk0202_389_1	7.52656	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	81121951	81123301	-57271416	-	MER52A	LTR	ERV1	-199	1556	1	4
chr9	81166018	81166019	chunk0202_391_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81162296	81168596	-57226121	+	L1PA7	LINE	L1	10	6154	0	4
chr9	81230405	81230406	chunk0202_394_1	6.84874	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81230128	81235339	-57159378	-	L1ME1	LINE	L1	-1022	5595	34	4
chr9	81351257	81351258	chunk0202_399_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81350746	81353039	-57041678	+	L1M1	LINE	L1	2264	4459	-3103	4
chr9	81509620	81509621	chunk0202_407_1	4.83532	AR_DHT_Control	chr9	81509433	81510015	-56884702	+	HAL1M8	LINE	L1	4	674	-2317	4
chr9	81531679	81531680	chunk0202_410_1	194.4107	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81531375	81531795	-56862922	-	LTR16B2	LTR	ERVL	0	462	41	4
chr9	81712964	81712965	chunk0202_419_1	5.50169	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81712962	81713051	-56681666	+	L1ME4c	LINE	L1	342	430	-400	4
chr9	81727273	81727274	chunk0202_423_1	6.54845	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	81727114	81727576	-56667141	-	L1ME4a	LINE	L1	-3	6121	5589	4
chr9	81795456	81795457	chunk0202_426_1	18.7412	AR_DHT_Control	chr9	81795084	81795656	-56599061	-	L2a	LINE	L2	-8	3418	2825	4
chr9	81855645	81855646	chunk0202_434_1	60.5909	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	81854575	81855831	-56538886	-	Tigger3b	DNA	TcMar-Tigger	0	1231	1	4
chr9	82064661	82064662	chunk0202_438_1	23.18637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82064641	82064680	-56330037	-	L1PA10	LINE	L1	-12	6156	6118	4
chr9	82108693	82108694	chunk0202_441_1	22.66402	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	82107746	82109000	-56285717	+	Tigger3b	DNA	TcMar-Tigger	1	1230	-1	4
chr9	82209225	82209226	chunk0202_445_1	80.3813	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82207824	82210221	-56184496	-	L1M1	LINE	L1	-3702	3860	1981	4
chr9	82308254	82308255	chunk0202_447_1	10.65215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82308215	82308274	-56086443	+	A-rich	Low_complexity	Low_complexity	1	59	0	4
chr9	82632945	82632946	chunk0203_11_1	60.0886	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82632780	82633852	-55760865	+	L1PA15	LINE	L1	5075	6165	0	4
chr9	82651772	82651773	chunk0203_12_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	82650246	82652179	-55742538	-	L1M1	LINE	L1	-4367	3198	399	4
chr9	82722761	82722762	chunk0203_18_1	17.12671	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82722628	82722777	-55671940	-	L2c	LINE	L2	-7	3380	3237	4
chr9	82811092	82811093	chunk0203_19_1	12.3053	AR_DHT_Control	chr9	82811003	82811558	-55583159	+	MER41A	LTR	ERV1	1	554	0	4
chr9	82875537	82875538	chunk0203_22_1	7.83165	AR_DHT_Control	chr9	82874148	82876196	-55518521	+	Tigger4	DNA	TcMar-Tigger	1	2032	-699	4
chr9	82881973	82881974	chunk0203_25_1	33.06034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	82881783	82882699	-55512018	+	MamGypLTR2c	LTR	Gypsy	91	973	-95	4
chr9	82943997	82943998	chunk0203_30_1	12.9588	AR_DHT_Control	chr9	82943536	82944209	-55450508	-	L1ME1	LINE	L1	-28	6151	5448	4
chr9	82991985	82991986	chunk0203_31_1	31.18498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	82991881	82992015	-55402702	+	L2a	LINE	L2	3281	3422	-4	4
chr9	82996231	82996232	chunk0203_32_1	7.37742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	82996228	82996415	-55398302	-	Helitron2Na_Mam	RC?	Helitron?	-92	232	59	4
chr9	83069418	83069419	chunk0203_43_1	76.0721	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	83069164	83071403	-55323314	-	L1ME1	LINE	L1	-8	6171	3883	4
chr9	83130795	83130796	chunk0203_49_1	10.1569	AR_DHT_Control	chr9	83130611	83130806	-55263911	-	L2c	LINE	L2	0	3387	3222	4
chr9	83142113	83142114	chunk0203_54_1	42.6365	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	83142011	83142357	-55252360	+	L1M6	LINE	L1	1425	1755	-4741	4
chr9	83555675	83555676	chunk0203_67_1	6.9786	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	83550724	83556150	-54838567	-	L1PA14	LINE	L1	-1738	6403	1	4
chr9	83700632	83700633	chunk0203_73_1	7.22694	AR_DHT_Control	chr9	83700449	83701022	-54693695	-	L2b	LINE	L2	-54	3321	2692	4
chr9	83827620	83827621	chunk0203_76_1	73.9886	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	83827439	83827628	-54567089	+	L2b	LINE	L2	3152	3374	-1	4
chr9	83894473	83894474	chunk0203_79_1	22.2669	AR_DHT_Control	chr9	83894354	83894889	-54499828	+	MER68	LTR	ERVL	1	563	0	4
chr9	83934721	83934722	chunk0203_81_1	51.1274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	83934696	83934977	-54459740	+	MER92C	LTR	ERV1	312	589	-1	4
chr9	83962303	83962304	chunk0203_83_1	13.64128	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	83962278	83962577	-54432140	-	LTR16D	LTR	ERVL	-159	492	151	4
chr9	83999270	83999271	chunk0203_88_1	8.79298	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	83999267	83999501	-54395216	-	MIR	SINE	MIR	0	262	4	4
chr9	84215759	84215760	chunk0203_96_1	29.0108	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	84215731	84215894	-54178823	-	HAL1	LINE	L1	-1534	973	793	4
chr9	84319220	84319221	chunk0203_101_1	7.3267	AR_DHT_Control	chr9	84319156	84319257	-54075460	+	MER67A	LTR	ERV1	443	543	0	4
chr9	84495033	84495034	chunk0203_105_1	5.69226	AR_DHT_Control	chr9	84494748	84495586	-53899131	-	L1ME1	LINE	L1	0	6179	5339	4
chr9	84746291	84746292	chunk0203_115_1	13.4183	AR_DHT_Control	chr9	84746077	84746402	-53648315	+	MER58B	DNA	hAT-Charlie	1	333	-8	4
chr9	84750623	84750624	chunk0203_116_1	118.2024	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	84750555	84750748	-53643969	+	MER58A	DNA	hAT-Charlie	30	224	0	4
chr9	85147227	85147228	chunk0203_127_1	124.68104	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	85147195	85147730	-53246987	-	L2a	LINE	L2	0	3426	2755	4
chr9	85201158	85201159	chunk0203_129_1	6.6351	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	85200898	85201211	-53193506	+	MLT1F2	LTR	ERVL-MaLR	1	311	-237	4
chr9	85480664	85480665	chunk0203_137_1	7.19831	AR_DHT_Control	chr9	85480205	85480810	-52913907	+	L2a	LINE	L2	2608	3257	-169	4
chr9	85532704	85532705	chunk0203_142_1	6.73066	AR_DHT_Control	chr9	85532574	85532813	-52861904	-	LTR40a	LTR	ERVL	-255	264	3	4
chr9	85605857	85605858	chunk0203_150_1	6.13915	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	85602598	85606114	-52788603	+	L1MA4A	LINE	L1	15	3630	-3935	4
chr9	85691693	85691694	chunk0203_154_1	16.56021	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	85691566	85691859	-52702858	-	L1ME4a	LINE	L1	-2191	3955	3633	4
chr9	85795503	85795504	chunk0203_155_1	23.4743	AR_DHT_Control	chr9	85795500	85795691	-52599026	-	L2b	LINE	L2	-1	3374	3152	4
chr9	85834788	85834789	chunk0203_159_1	104.03147	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	85834395	85834931	-52559786	-	MER68	LTR	ERVL	0	563	1	4
chr9	85895433	85895434	chunk0203_161_1	9.39801	AR_DHT_Control	chr9	85895386	85895503	-52499214	+	MER94	DNA	hAT-Blackjack	21	134	0	4
chr9	85917852	85917853	chunk0203_162_1	8.27376	AR_DHT_Control	chr9	85917795	85918079	-52476638	-	L1M5	LINE	L1	-454	5740	5449	4
chr9	86036786	86036787	chunk0203_164_1	5.56779	AR_DHT_Control	chr9	86036777	86037133	-52357584	+	L1MB7	LINE	L1	2570	2935	-3211	4
chr9	86054902	86054903	chunk0203_171_1	194.0082	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	86054783	86054916	-52339801	+	MER112	DNA	hAT-Charlie	95	254	-7	4
chr9	86131676	86131677	chunk0203_178_1	8.0483	AR_DHT_Control	chr9	86131415	86131859	-52262858	+	MLT1J	LTR	ERVL-MaLR	37	510	-2	4
chr9	86170991	86170992	chunk0203_179_1	44.1961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86170870	86171011	-52223706	-	L1M4	LINE	L1	-1217	4929	4781	4
chr9	86170991	86170992	chunk0203_179_1	44.1961	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86170986	86171064	-52223653	-	L1MB7	LINE	L1	-504	5680	5599	4
chr9	86369438	86369439	chunk0203_184_1	8.64577	AR_DHT_Control	chr9	86368976	86369564	-52025153	-	LTR26	LTR	ERV1	0	603	3	4
chr9	86369978	86369979	chunk0203_185_1	8.76676	AR_DHT_Control	chr9	86369866	86370063	-52024654	-	L1M2	LINE	L1	-493	7223	7028	4
chr9	86380817	86380818	chunk0203_186_1	85.7022	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86377466	86383626	-52011091	-	L1PA4	LINE	L1	-3	6152	2	4
chr9	86404389	86404390	chunk0203_189_1	37.81965	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	86404097	86404441	-51990276	+	MLT1A0	LTR	ERVL-MaLR	1	363	-2	4
chr9	86500167	86500168	chunk0203_198_1	106.9696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	86500000	86500182	-51894535	-	L1MCa	LINE	L1	-5146	1362	1179	4
chr9	86504487	86504488	chunk0203_199_1	6.0927	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	86504419	86504625	-51890092	+	MIRb	SINE	MIR	22	234	-34	4
chr9	86521263	86521264	chunk0203_201_1	24.299	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	86520902	86521934	-51872783	+	MER57-int	LTR	ERV1	6459	7537	0	4
chr9	86551090	86551091	chunk0203_204_1	90.1234	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	86550876	86551211	-51843506	+	Tigger3a	DNA	TcMar-Tigger	2	348	0	4
chr9	86555901	86555902	chunk0203_205_1	23.32623	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86555362	86556135	-51838582	+	L1MB5	LINE	L1	5098	5867	-307	4
chr9	86592211	86592212	chunk0203_208_1	22.78172	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86592106	86592363	-51802354	-	L1MA7	LINE	L1	-3	6288	6029	4
chr9	86651394	86651395	chunk0203_212_1	9.76623	AR_DHT_Control	chr9	86649324	86652187	-51742530	-	L1MD1	LINE	L1	0	6242	3349	4
chr9	86693429	86693430	chunk0203_216_1	34.213	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	86693363	86694612	-51700105	+	L1MEd	LINE	L1	1580	2926	-3220	4
chr9	86787327	86787328	chunk0203_219_1	5.73904	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	86787230	86787350	-51607367	+	Tigger20a	DNA	TcMar-Tigger	626	747	-226	4
chr9	87062960	87062961	chunk0203_232_1	6.20286	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	87062767	87063012	-51331705	+	MIRb	SINE	MIR	24	268	0	4
chr9	87119158	87119159	chunk0203_233_1	5.45876	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	87118858	87119170	-51275547	+	AluJb	SINE	Alu	1	312	0	4
chr9	87172460	87172461	chunk0203_236_1	10.4004	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	87171398	87172936	-51221781	+	L1MEc	LINE	L1	2386	4575	-1744	4
chr9	87255067	87255068	chunk0203_239_1	8.85743	AR_DHT_Control	chr9	87254835	87255081	-51139636	-	MIR	SINE	MIR	0	262	15	4
chr9	87398275	87398276	chunk0203_248_1	41.5812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	87398200	87398333	-50996384	-	L1ME4a	LINE	L1	-16	6108	5969	4
chr9	87423197	87423198	chunk0203_249_1	20.72355	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	87423023	87423375	-50971342	+	MER57B2	LTR	ERV1	8	403	0	4
chr9	87779122	87779123	chunk0203_260_1	8.2993	AR_DHT_Control	chr9	87778855	87779306	-50615411	-	Tigger3b	DNA	TcMar-Tigger	0	1231	794	4
chr9	87816255	87816256	chunk0203_263_1	28.8832	AR_DHT_Control	chr9	87815599	87816478	-50578239	+	L1MA6	LINE	L1	4230	5107	-1036	4
chr9	87991669	87991670	chunk0203_266_1	41.1143	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	87991582	87992058	-50402659	-	L1MC1	LINE	L1	-5	5759	5274	4
chr9	88180279	88180280	chunk0203_269_1	40.6135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	88180080	88180434	-50214283	-	Tigger17c	DNA	TcMar-Tigger	-574	614	273	4
chr9	88414446	88414447	chunk0203_271_1	8.24382	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	88413856	88414466	-49980251	-	MER21C	LTR	ERVL	-183	755	128	4
chr9	88460821	88460822	chunk0203_274_1	6.13915	AR_DHT_Control	chr9	88460440	88460889	-49933828	-	MLT2B1	LTR	ERVL	-7	513	1	4
chr9	88596617	88596618	chunk0203_275_1	43.7277	AR_DHT_Control	chr9	88596288	88596712	-49798005	-	MER83	LTR	ERV1	0	448	1	4
chr9	88698311	88698312	chunk0203_277_1	22.1534	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	88698207	88698426	-49696291	-	L2c	LINE	L2	-38	3349	3147	4
chr9	88771337	88771338	chunk0203_279_1	21.36843	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	88770006	88772174	-49622543	-	L1MC3	LINE	L1	-1213	4933	2700	4
chr9	88899728	88899729	chunk0203_286_1	14.46217	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	88899256	88900858	-49493859	-	L1MCa	LINE	L1	-1110	5211	3586	4
chr9	88936484	88936485	chunk0203_288_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	88935976	88937253	-49457464	+	L1MD3	LINE	L1	6613	7836	-159	4
chr9	89150771	89150772	chunk0203_295_1	7.73888	AR_DHT_Control	chr9	89150270	89151016	-49243701	-	L1MB7	LINE	L1	-86	6098	5359	4
chr9	89254137	89254138	chunk0203_299_1	15.51973	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	89253216	89254765	-49139952	+	(TG)n	Simple_repeat	Simple_repeat	1	1639	0	4
chr9	89260744	89260745	chunk0203_300_1	5.32898	AR_DHT_Control	chr9	89260461	89260862	-49133855	+	(GT)n	Simple_repeat	Simple_repeat	1	427	0	4
chr9	89328189	89328190	chunk0203_304_1	13.80739	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	89328100	89328405	-49066312	-	Tigger3b	DNA	TcMar-Tigger	-900	331	3	4
chr9	89470661	89470662	chunk0203_312_1	13.4018	AR_DHT_Control	chr9	89470122	89471045	-48923672	+	L1ME1	LINE	L1	5129	6154	-25	4
chr9	89484671	89484672	chunk0203_314_1	4.84918	AR_DHT_Control	chr9	89484471	89485011	-48909706	+	(GT)n	Simple_repeat	Simple_repeat	2	565	0	4
chr9	89556784	89556785	chunk0203_318_1	8.27423	AR_DHT_Control	chr9	89556752	89557171	-48837546	-	L1M5	LINE	L1	-763	5681	5275	4
chr9	89730313	89730314	chunk0203_330_1	8.90491	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	89729831	89730506	-48664211	+	(TG)n	Simple_repeat	Simple_repeat	1	704	0	4
chr9	89755927	89755928	chunk0203_331_1	10.2166	AR_DHT_Control	chr9	89755268	89756029	-48638688	-	L1ME2z	LINE	L1	0	6444	5659	4
chr9	89790734	89790735	chunk0203_340_1	5.96802	AR_DHT_Control	chr9	89790630	89790746	-48603971	-	MIRc	SINE	MIR	-135	133	20	4
chr9	89862932	89862933	chunk0203_351_1	217.1147	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	89862723	89862982	-48531735	+	L2b	LINE	L2	3075	3342	-45	4
chr9	89888911	89888912	chunk0203_362_1	37.0368	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	89888775	89888949	-48505768	-	MER58A	DNA	hAT-Charlie	-37	187	5	4
chr9	89906906	89906907	chunk0203_363_1	13.2796	AR_DHT_Control	chr9	89906689	89909182	-48485535	+	L1P2	LINE	L1	605	3089	-3057	4
chr9	89926744	89926745	chunk0203_364_1	13.7592	AR_DHT_Control	chr9	89926502	89926796	-48467921	+	HAL1	LINE	L1	2154	2507	0	4
chr9	89964689	89964690	chunk0203_366_1	41.2136	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	89964662	89965080	-48429637	-	L1ME4b	LINE	L1	-418	474	29	4
chr9	89982195	89982196	chunk0203_367_1	10.231	AR_DHT_Control	chr9	89982022	89982582	-48412135	+	L2	LINE	L2	210	828	-2591	4
chr9	90099308	90099309	chunk0203_372_1	6.10347	AR_DHT_Control	chr9	90098747	90099499	-48295218	+	(CA)n	Simple_repeat	Simple_repeat	1	799	0	4
chr9	90162963	90162964	chunk0203_374_1	5.23393	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90162320	90162973	-48231744	+	(AC)n	Simple_repeat	Simple_repeat	1	697	0	4
chr9	90249247	90249248	chunk0203_375_1	24.5586	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	90249210	90250042	-48144675	-	L2a	LINE	L2	-1045	2374	1541	4
chr9	90296121	90296122	chunk0203_377_1	6.83133	AR_DHT_Control	chr9	90295862	90296287	-48098430	-	L3	LINE	CR1	-11	4088	3622	4
chr9	90359440	90359441	chunk0203_382_1	170.5871	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	90359364	90360235	-48034482	-	L1MD1	LINE	L1	0	6633	5742	4
chr9	90421239	90421240	chunk0203_383_1	68.7178	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90420207	90422125	-47972592	-	MER76-int	LTR	ERVL	-1681	4508	2440	4
chr9	90456116	90456117	chunk0203_386_1	112.09607	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	90455959	90456120	-47938597	-	L2a	LINE	L2	-5	3421	3256	4
chr9	90457726	90457727	chunk0203_387_1	5.95209	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90457712	90457909	-47936808	+	L2b	LINE	L2	2960	3156	-219	4
chr9	90555571	90555572	chunk0203_392_1	145.33306	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	90555552	90555753	-47838964	+	L1ME4b	LINE	L1	300	474	-450	4
chr9	90573468	90573469	chunk0203_397_1	24.12503	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	90573280	90573488	-47821229	-	HAL1ME	LINE	L1	-16	2449	2237	4
chr9	90630071	90630072	chunk0203_402_1	5.99044	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	90630062	90630101	-47764616	+	(CT)n	Simple_repeat	Simple_repeat	1	41	0	4
chr9	90706397	90706398	chunk0203_403_1	22.04828	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	90706391	90706542	-47688175	+	L1MB1	LINE	L1	6017	6168	0	4
chr9	90733554	90733555	chunk0203_405_1	7.36432	AR_DHT_Control	chr9	90733491	90733951	-47660766	+	L1MD1	LINE	L1	4413	4932	-1214	4
chr9	90799535	90799536	chunk0203_406_1	120.91677	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90798778	90799779	-47594938	-	L1MC1	LINE	L1	0	6333	5386	4
chr9	90836446	90836447	chunk0203_408_1	35.1875	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	90836314	90837197	-47557520	+	Tigger2b_Pri	DNA	TcMar-Tigger	154	1067	-1	4
chr9	90842254	90842255	chunk0203_410_1	5.50694	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	90840999	90842747	-47551970	+	(TG)n	Simple_repeat	Simple_repeat	1	1820	0	4
chr9	90929726	90929727	chunk0203_415_1	26.99541	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	90929659	90929865	-47464852	-	L2b	LINE	L2	-265	3161	2949	4
chr9	91030223	91030224	chunk0203_422_1	26.0787	AR_DHT_Control	chr9	91030209	91030366	-47364351	+	LTR82B	LTR	ERVL	649	823	-7	4
chr9	91059734	91059735	chunk0203_425_1	13.8979	AR_DHT_Control	chr9	91059708	91059820	-47334897	+	MLT1J2	LTR	ERVL-MaLR	28	144	-304	4
chr9	91097964	91097965	chunk0203_426_1	8.51012	AR_DHT_Control	chr9	91097673	91098019	-47296698	+	MER2	DNA	TcMar-Tigger	1	345	0	4
chr9	91237815	91237816	chunk0203_433_1	22.3942	AR_DHT_Control	chr9	91237490	91237819	-47156898	-	L1MC5	LINE	L1	-899	8405	8080	4
chr9	91262106	91262107	chunk0203_436_1	18.5274	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	91261913	91262137	-47132580	+	LTR78B	LTR	ERV1	1073	1291	-5	4
chr9	91328053	91328054	chunk0203_438_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	91327215	91328114	-47066603	+	LTR27D	LTR	ERV1	1	1073	-4	4
chr9	91329223	91329224	chunk0203_439_1	29.00553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	91328760	91329796	-47064921	-	L1MB7	LINE	L1	-9	6175	5089	4
chr9	91341725	91341726	chunk0203_441_1	15.5258	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	91341647	91342047	-47052670	-	L2a	LINE	L2	-3	3423	2974	4
chr9	91433328	91433329	chunk0203_449_1	5.78771	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	91433263	91433386	-46961331	+	MIR	SINE	MIR	71	192	-70	4
chr9	91456919	91456920	chunk0203_450_1	6.62034	AR_DHT_Control	chr9	91455891	91458637	-46936080	-	L1ME1	LINE	L1	-124	6055	3146	4
chr9	91503043	91503044	chunk0203_454_1	18.62877	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	91503029	91503569	-46891148	-	MLT1G1	LTR	ERVL-MaLR	-7	572	1	4
chr9	91522014	91522015	chunk0204_1_1	44.67391	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	91519794	91522340	-46872377	+	L1MB3	LINE	L1	1016	3323	-2996	4
chr9	91555421	91555422	chunk0204_4_1	75.2811	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	91555132	91556100	-46838617	+	L1MC2	LINE	L1	5367	6336	-8	4
chr9	91711695	91711696	chunk0204_11_1	6.76351	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	91710811	91712132	-46682585	+	(TG)n	Simple_repeat	Simple_repeat	1	1397	0	4
chr9	91994705	91994706	chunk0204_18_1	10.0576	AR_DHT_Control	chr9	91994415	91994971	-46399746	-	MER34A1	LTR	ERV1	0	587	1	4
chr9	92062693	92062694	chunk0204_19_1	5.0408	AR_DHT_Control	chr9	92062689	92062821	-46331896	+	FLAM_A	SINE	Alu	1	132	-10	4
chr9	92398193	92398194	chunk0204_26_1	99.9686	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	92397629	92398788	-45995929	-	L1MC4a	LINE	L1	-1090	6792	5641	4
chr9	92436325	92436326	chunk0204_30_1	34.3542	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	92435335	92436918	-45957799	-	L1MD1	LINE	L1	-1	6241	4615	4
chr9	92623989	92623990	chunk0204_34_1	16.6117	AR_DHT_Control	chr9	92623976	92624054	-45770663	-	MER6B	DNA	TcMar-Tigger	0	210	134	4
chr9	92624857	92624858	chunk0204_35_1	6.92693	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	92624791	92625172	-45769545	+	L1ME3	LINE	L1	5784	6138	-24	4
chr9	92666326	92666327	chunk0204_38_1	12.122	AR_DHT_Control	chr9	92666253	92666351	-45728366	+	L3	LINE	CR1	3222	3324	-775	4
chr9	92734133	92734134	chunk0204_41_1	7.50276	AR_DHT_Control	chr9	92733993	92734225	-45660492	+	L1ME3	LINE	L1	5740	5977	-185	4
chr9	92754373	92754374	chunk0204_42_1	20.5302	AR_DHT_Control	chr9	92754161	92754495	-45640222	-	Tigger9b	DNA	TcMar-Tigger	-212	412	5	4
chr9	92757482	92757483	chunk0204_43_1	11.463	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	92757351	92757544	-45637173	+	L1MC5	LINE	L1	8890	9081	-223	4
chr9	92777163	92777164	chunk0204_46_1	92.6244	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	92776901	92777276	-45617441	+	L1MB8	LINE	L1	5188	5569	-610	4
chr9	93194673	93194674	chunk0204_50_1	67.7892	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	93193870	93195382	-45199335	+	L1MC2	LINE	L1	4755	6344	0	4
chr9	93313182	93313183	chunk0204_57_1	5.89231	AR_DHT_Control	chr9	93312799	93313270	-45081447	-	L1MB3	LINE	L1	-5936	1581	1091	4
chr9	93393251	93393252	chunk0204_59_1	6.44773	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	93391451	93393828	-45000889	-	HERVL18-int	LTR	ERVL	0	6047	3659	4
chr9	93443270	93443271	chunk0204_61_1	4.83532	AR_DHT_Control	chr9	93443000	93443522	-44951195	+	Tigger6a	DNA	TcMar-Tigger	537	1083	0	4
chr9	93505771	93505772	chunk0204_63_1	15.06679	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	93505580	93505785	-44888932	+	L1MC5	LINE	L1	9099	9304	0	4
chr9	93705412	93705413	chunk0204_73_1	6.73404	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	93704689	93706185	-44688532	-	L1M4	LINE	L1	-3871	2876	1277	4
chr9	93886506	93886507	chunk0204_75_1	110.876	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	93885797	93886845	-44507872	-	Tigger2b_Pri	DNA	TcMar-Tigger	-1	1067	3	4
chr9	94002985	94002986	chunk0204_78_1	30.7057	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94002862	94003251	-44391466	+	L1ME2	LINE	L1	5722	6161	-3	4
chr9	94076708	94076709	chunk0204_84_1	14.2212	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	94076345	94077019	-44317698	-	L1MB8	LINE	L1	-180	5998	5315	4
chr9	94078008	94078009	chunk0204_85_1	8.95279	AR_DHT_Control	chr9	94077985	94078084	-44316633	-	L1MB7	LINE	L1	-169	6015	5919	4
chr9	94087629	94087630	chunk0204_87_1	21.2817	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	94087426	94087710	-44307007	+	L1MC5a	LINE	L1	626	911	-1866	4
chr9	94135390	94135391	chunk0204_89_1	213.1388	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	94135302	94135769	-44258948	-	MLT1C	LTR	ERVL-MaLR	-2	465	1	4
chr9	94294077	94294078	chunk0204_91_1	25.2858	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94294057	94294157	-44100560	-	L1M5	LINE	L1	-499	5743	5650	4
chr9	94397870	94397871	chunk0204_93_1	36.5631	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94397532	94398243	-43996474	-	L1MC3	LINE	L1	-174	7611	6849	4
chr9	94507596	94507597	chunk0204_94_1	8.46453	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94506899	94507737	-43886980	+	L1MA7	LINE	L1	4625	5485	-806	4
chr9	94508041	94508042	chunk0204_96_1	12.2893	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	94507843	94508159	-43886558	+	L1MA7	LINE	L1	5486	5787	-504	4
chr9	94520575	94520576	chunk0204_97_1	16.4778	AR_DHT_Control	chr9	94520481	94520912	-43873805	-	L1MDa	LINE	L1	-2046	4491	4075	4
chr9	94572622	94572623	chunk0204_98_1	29.6846	AR_DHT_Control	chr9	94572554	94572679	-43822038	+	L2b	LINE	L2	3231	3378	-48	4
chr9	94779916	94779917	chunk0204_108_1	24.3709	AR_DHT_Control	chr9	94779422	94779962	-43614755	-	Charlie29a	DNA	hAT-Charlie	0	719	188	4
chr9	94910878	94910879	chunk0204_112_1	7.74745	AR_DHT_Control	chr9	94910802	94910881	-43483836	-	MADE2	DNA	TcMar-Mariner	0	80	1	4
chr9	95095039	95095040	chunk0204_118_1	9.11386	AR_DHT_Control	chr9	95094935	95095137	-43299580	-	L1MB3	LINE	L1	-364	5819	5619	4
chr9	95121598	95121599	chunk0204_121_1	15.339	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	95121385	95121858	-43272859	+	L1ME3F	LINE	L1	5501	6029	-214	4
chr9	95282595	95282596	chunk0204_128_1	73.7861	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	95280703	95282976	-43111741	+	L1M1	LINE	L1	2128	4451	-3111	4
chr9	95385506	95385507	chunk0204_135_1	13.8104	AR_DHT_Control	chr9	95385428	95385509	-43009208	-	L2a	LINE	L2	0	3426	3348	4
chr9	95666207	95666208	chunk0204_142_1	37.13432	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	95665964	95666223	-42728494	+	L2a	LINE	L2	3140	3426	0	4
chr9	95684039	95684040	chunk0204_147_1	33.08256	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	95683810	95684053	-42710664	+	L1MA9	LINE	L1	5998	6273	-39	4
chr9	95767843	95767844	chunk0204_153_1	15.61661	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	95767700	95767937	-42626780	+	L2a	LINE	L2	3203	3424	-2	4
chr9	95823355	95823356	chunk0204_157_1	27.63531	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	95823346	95823605	-42571112	-	LTR16A2	LTR	ERVL	-6	489	240	4
chr9	95835689	95835690	chunk0204_159_1	31.1668	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	95835095	95835782	-42558935	+	L4_C_Mam	LINE	RTE-X	2094	2889	-2249	4
chr9	95899964	95899965	chunk0204_164_1	14.8157	AR_DHT_Control	chr9	95899677	95899980	-42494737	-	MER2	DNA	TcMar-Tigger	0	345	9	4
chr9	96073599	96073600	chunk0204_177_1	12.76762	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	96073533	96073894	-42320823	+	MLT1I	LTR	ERVL-MaLR	13	404	-7	4
chr9	96261802	96261803	chunk0204_184_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	96261642	96262163	-42132554	+	LTR78	LTR	ERV1	747	1304	0	4
chr9	96266852	96266853	chunk0204_185_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	96266851	96267157	-42127560	+	HAL1	LINE	L1	604	950	-1557	4
chr9	96406134	96406135	chunk0204_187_1	30.57004	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	96405578	96406154	-41988563	+	L1MB5	LINE	L1	6368	6925	-20	4
chr9	96408747	96408748	chunk0204_189_1	7.62275	AR_DHT_Control	chr9	96408254	96408774	-41985943	+	L1MB2	LINE	L1	5640	6164	-7	4
chr9	96582505	96582506	chunk0204_192_1	33.6709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	96582146	96582727	-41811990	+	LTR10C	LTR	ERV1	1	591	0	4
chr9	96661942	96661943	chunk0204_205_1	71.3327	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	96661748	96662459	-41732258	-	ERVL-B4-int	LTR	ERVL	-1096	4618	3871	4
chr9	96695547	96695548	chunk0204_206_1	10.1791	AR_DHT_Control	chr9	96695423	96695735	-41698982	+	L1MA5	LINE	L1	5969	6300	0	4
chr9	96875187	96875188	chunk0204_210_1	41.32549	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	96875078	96875288	-41519429	+	MIRb	SINE	MIR	3	228	-40	4
chr9	96990117	96990118	chunk0204_213_1	72.90411	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	96989865	96990577	-41404140	+	L1MC3	LINE	L1	6849	7611	-174	4
chr9	97104138	97104139	chunk0204_214_1	49.1735	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	97103963	97104304	-41290413	-	MER57B2	LTR	ERV1	0	403	3	4
chr9	97109129	97109130	chunk0204_215_1	5.46037	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	97108649	97109296	-41285421	+	L1ME3	LINE	L1	5197	5845	-317	4
chr9	97395191	97395192	chunk0204_219_1	8.14633	AR_DHT_Control	chr9	97395137	97395321	-40999396	+	MLT1B	LTR	ERVL-MaLR	192	380	-10	4
chr9	97567569	97567570	chunk0204_228_1	7.86105	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	97567334	97567592	-40827125	-	MamRep38	DNA	hAT	-4	291	13	4
chr9	97646079	97646080	chunk0204_230_1	20.5806	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	97646001	97646141	-40748576	-	MER5A	DNA	hAT-Charlie	0	189	45	4
chr9	97735689	97735690	chunk0204_232_1	16.84653	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	97735573	97735698	-40659019	+	MIRc	SINE	MIR	97	241	-27	4
chr9	97757100	97757101	chunk0204_234_1	4.89968	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	97757048	97757516	-40637201	+	LTR33	LTR	ERVL	1	501	-14	4
chr9	97871534	97871535	chunk0204_236_1	5.193	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	97871320	97871897	-40522820	+	L1PB	LINE	L1	5021	5605	-546	4
chr9	97950750	97950751	chunk0204_238_1	10.3736	AR_DHT_Control	chr9	97945361	97951518	-40443199	-	L1PA6	LINE	L1	-16	6138	1	4
chr9	98024911	98024912	chunk0204_241_1	9.74833	AR_DHT_Control	chr9	98024870	98024928	-40369789	-	L2c	LINE	L2	0	3375	3312	4
chr9	98045513	98045514	chunk0204_242_1	9.78588	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	98045312	98045711	-40349006	+	MER57B1	LTR	ERV1	1	401	0	4
chr9	98062590	98062591	chunk0204_244_1	61.7218	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	98062465	98062782	-40331935	-	L1ME4c	LINE	L1	-6	824	475	4
chr9	98090417	98090418	chunk0204_249_1	7.97093	AR_DHT_Control	chr9	98090286	98090560	-40304157	+	L1ME3	LINE	L1	5844	6128	-34	4
chr9	98135595	98135596	chunk0204_256_1	45.4492	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	98135549	98135696	-40259021	+	L3	LINE	CR1	3898	4046	-53	4
chr9	98175960	98175961	chunk0204_263_1	243.6746	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	98175925	98176003	-40218714	-	MIR	SINE	MIR	0	262	184	4
chr9	98211551	98211552	chunk0204_266_1	77.65223	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	98211490	98211586	-40183131	+	MIR	SINE	MIR	75	180	-82	4
chr9	98341598	98341599	chunk0204_273_1	8.39768	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	98341530	98341895	-40052822	-	L4_C_Mam	LINE	RTE-X	-171	4967	4599	4
chr9	98358340	98358341	chunk0204_276_1	11.82505	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	98357735	98358364	-40036353	-	L1ME3D	LINE	L1	-110	6132	5490	4
chr9	98807316	98807317	chunk0204_278_1	15.5201	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	98807264	98807412	-39587305	+	MIRc	SINE	MIR	108	247	-21	4
chr9	98954574	98954575	chunk0204_284_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	98954238	98954780	-39439937	-	L1ME4a	LINE	L1	-10	6114	5521	4
chr9	99381534	99381535	chunk0204_291_1	9.61425	AR_DHT_Control	chr9	99381449	99381578	-39013139	+	L2c	LINE	L2	3246	3376	-11	4
chr9	99421549	99421550	chunk0204_292_1	9.80886	AR_DHT_Control	chr9	99421462	99421618	-38973099	+	MIR3	SINE	MIR	33	194	-14	4
chr9	100004406	100004407	chunk0204_296_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	100000454	100004861	-38389856	-	L1M3e	LINE	L1	-2524	5038	460	4
chr9	100049688	100049689	chunk0204_298_1	175.9895	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100049416	100050350	-38344367	+	L1MD2	LINE	L1	5292	6178	-1	4
chr9	100132164	100132165	chunk0204_302_1	50.0468	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100132011	100132224	-38262493	+	L2c	LINE	L2	3179	3422	-4	4
chr9	100285863	100285864	chunk0204_311_1	129.8625	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	100285470	100285946	-38108771	-	MER68	LTR	ERVL	-11	552	76	4
chr9	100307301	100307302	chunk0204_313_1	46.6045	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100307230	100307443	-38087274	+	MER58A	DNA	hAT-Charlie	10	224	0	4
chr9	100425935	100425936	chunk0204_316_1	64.74215	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100425839	100426503	-37968214	+	L1MB5	LINE	L1	5472	6165	-9	4
chr9	100701131	100701132	chunk0204_324_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100700933	100701151	-37693566	+	MIR	SINE	MIR	1	260	-8	4
chr9	100723874	100723875	chunk0204_325_1	9.08114	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	100723644	100723884	-37670833	-	L2c	LINE	L2	0	3426	3080	4
chr9	101178397	101178398	chunk0204_329_1	4.55016	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	101178020	101179711	-37215006	+	HERVL-int	LTR	ERVL	3933	5654	0	4
chr9	101316013	101316014	chunk0204_330_1	5.99997	AR_DHT_Control	chr9	101315997	101316110	-37078607	-	MIRb	SINE	MIR	-107	161	37	4
chr9	101339606	101339607	chunk0204_333_1	22.6852	AR_DHT_Control	chr9	101339533	101339671	-37055046	-	MIRb	SINE	MIR	-104	164	13	4
chr9	101388779	101388780	chunk0204_338_1	40.3934	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	101388736	101388895	-37005822	+	MER2	DNA	TcMar-Tigger	18	181	-164	4
chr9	101400229	101400230	chunk0204_340_1	29.25079	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	101400191	101400806	-36993911	+	L2	LINE	L2	257	979	-2440	4
chr9	101510016	101510017	chunk0204_346_1	4.76708	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	101508600	101511314	-36883403	-	Charlie3	DNA	hAT-Charlie	0	2706	26	4
chr9	101544131	101544132	chunk0204_350_1	24.59667	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	101544130	101544250	-36850467	-	X7A_LINE	LINE	CR1	-102	148	16	4
chr9	101556175	101556176	chunk0204_351_1	43.4065	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	101556075	101557016	-36837701	+	L1M5	LINE	L1	4497	5487	-2395	4
chr9	101567765	101567766	chunk0204_354_1	13.74551	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	101567744	101567778	-36826939	+	(CA)n	Simple_repeat	Simple_repeat	1	34	0	4
chr9	101648408	101648409	chunk0204_355_1	5.90945	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	101644868	101648726	-36745991	-	L1MA5A	LINE	L1	-5	6496	2584	4
chr9	101803447	101803448	chunk0204_364_1	20.46236	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	101803338	101803483	-36591234	-	MER91A	DNA	hAT-Tip100	-33	163	15	4
chr9	102041813	102041814	chunk0204_374_1	52.2749	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	102041248	102042068	-36352649	+	L1PA17	LINE	L1	4940	5751	-1015	4
chr9	102064276	102064277	chunk0204_375_1	8.27376	AR_DHT_Control	chr9	102064229	102067315	-36327402	-	L1PA6	LINE	L1	-3047	3272	178	4
chr9	102165433	102165434	chunk0204_381_1	24.4226	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	102165159	102165577	-36229140	+	MER57F	LTR	ERV1	2	435	0	4
chr9	102177260	102177261	chunk0204_382_1	5.32391	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	102176251	102178541	-36216176	-	L1MA6	LINE	L1	-4823	2345	29	4
chr9	102421714	102421715	chunk0204_393_1	15.7769	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	102421336	102422373	-35972344	+	L1MD1	LINE	L1	4943	5991	-251	4
chr9	102569749	102569750	chunk0204_400_1	5.95444	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	102569471	102570867	-35823850	+	L1M1	LINE	L1	1173	2560	-5005	4
chr9	102571214	102571215	chunk0204_401_1	19.17398	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	102570861	102572197	-35822520	+	L1M1	LINE	L1	3762	5115	-2450	4
chr9	102771797	102771798	chunk0204_405_1	17.46661	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	102770743	102772281	-35622436	-	L1MA8	LINE	L1	-5	6286	4693	4
chr9	102840308	102840309	chunk0204_411_1	8.36569	AR_DHT_Control	chr9	102840162	102840434	-35554283	+	MLT1B	LTR	ERVL-MaLR	111	389	-1	4
chr9	102965187	102965188	chunk0204_418_1	44.5014	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	102965088	102965576	-35429141	-	L1MA7	LINE	L1	-244	6251	5595	4
chr9	103038865	103038866	chunk0204_422_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	103037298	103038964	-35355753	+	L1PBa	LINE	L1	3	1640	-5223	4
chr9	103059694	103059695	chunk0204_423_1	5.0545	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	103058891	103060636	-35334081	-	L1PB4	LINE	L1	-2	6154	4410	4
chr9	103398123	103398124	chunk0204_430_1	7.85437	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	103398116	103398427	-34996290	-	L1PB4	LINE	L1	-5305	1614	1306	4
chr9	103517644	103517645	chunk0204_431_1	5.6425	AR_DHT_Control	chr9	103517238	103518043	-34876674	+	L1ME2	LINE	L1	4956	5769	-478	4
chr9	103625198	103625199	chunk0204_432_1	6.48643	AR_DHT_Control	chr9	103625029	103625530	-34769187	-	L2	LINE	L2	-1715	1704	1101	4
chr9	103734766	103734767	chunk0204_433_1	7.36432	AR_DHT_Control	chr9	103734749	103734844	-34659873	+	L2b	LINE	L2	3271	3380	-7	4
chr9	103883664	103883665	chunk0204_435_1	15.96395	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	103883423	103883933	-34510784	+	L1ME2	LINE	L1	5652	6242	0	4
chr9	104035755	104035756	chunk0204_441_1	19.70111	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	104035116	104035801	-34358916	+	L2a	LINE	L2	2630	3422	-4	4
chr9	104105728	104105729	chunk0204_446_1	6.5005	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	104104698	104105999	-34288718	-	MER70-int	LTR	ERVL	0	5023	3534	4
chr9	104236451	104236452	chunk0204_447_1	5.99997	AR_DHT_Control	chr9	104236429	104236544	-34158173	-	L2b	LINE	L2	-3	3372	3258	4
chr9	104297357	104297358	chunk0204_449_1	35.64379	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	104297267	104297549	-34097168	+	LTR80A	LTR	ERVL	4	286	-297	4
chr9	104498484	104498485	chunk0204_454_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	104498374	104498782	-33895935	+	L2b	LINE	L2	2938	3382	-5	4
chr9	104578665	104578666	chunk0204_460_1	28.4484	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	104578591	104578772	-33815945	-	MIRb	SINE	MIR	-74	194	5	4
chr9	104741050	104741051	chunk0204_463_1	21.19584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	104741020	104741119	-33653598	-	L3	LINE	CR1	-1577	2522	2415	4
chr9	104918519	104918520	chunk0205_5_1	57.6243	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	104918482	104918559	-33476158	+	L2c	LINE	L2	3314	3387	0	4
chr9	105065476	105065477	chunk0205_16_1	137.9381	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	105065476	105065617	-33329100	-	MIRc	SINE	MIR	-46	184	44	4
chr9	105144189	105144190	chunk0205_20_1	11.142	AR_DHT_Control	chr9	105143969	105144319	-33250398	+	Tigger3a	DNA	TcMar-Tigger	3	348	0	4
chr9	105154895	105154896	chunk0205_21_1	6.7814	AR_DHT_Control	chr9	105154826	105154990	-33239727	+	L2a	LINE	L2	3249	3407	-19	4
chr9	105279012	105279013	chunk0205_23_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	105278679	105279014	-33115703	-	Tigger9a	DNA	TcMar-Tigger	-388	344	1	4
chr9	105319304	105319305	chunk0205_25_1	5.16131	AR_DHT_Control	chr9	105319141	105319791	-33074926	-	MER77B	LTR	ERVL	-21	679	1	4
chr9	105364924	105364925	chunk0205_26_1	8.38514	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	105364811	105364929	-33029788	+	L1ME3Cz	LINE	L1	855	969	-28	4
chr9	105572574	105572575	chunk0205_31_1	64.89807	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	105572320	105572769	-32821948	+	L1M7	LINE	L1	31	565	-5678	4
chr9	105709657	105709658	chunk0205_38_1	30.00703	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	105709318	105709824	-32684893	-	Tigger19b	DNA	TcMar-Tigger	-1	549	54	4
chr9	105737694	105737695	chunk0205_39_1	7.42871	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	105736171	105738568	-32656149	-	L1M2a	LINE	L1	-4658	2908	400	4
chr9	105776671	105776672	chunk0205_42_1	15.08138	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	105776655	105776966	-32617751	-	L2a	LINE	L2	-5	3421	3076	4
chr9	106091365	106091366	chunk0205_49_1	7.83221	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	106091201	106091790	-32302927	-	L1ME5	LINE	L1	-328	5866	5255	4
chr9	106150147	106150148	chunk0205_50_1	27.5834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	106150056	106150247	-32244470	+	L2a	LINE	L2	3225	3426	0	4
chr9	106157132	106157133	chunk0205_52_1	8.27376	AR_DHT_Control	chr9	106156906	106157474	-32237243	+	L2c	LINE	L2	2608	3171	-216	4
chr9	106450491	106450492	chunk0205_53_1	34.80834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	106450433	106450967	-31943750	+	MLT1G1	LTR	ERVL-MaLR	1	579	0	4
chr9	106565298	106565299	chunk0205_57_1	6.13432	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	106564923	106567704	-31827013	+	L1PA8A	LINE	L1	3	2729	-3602	4
chr9	106586108	106586109	chunk0205_58_1	11.3624	AR_DHT_Control	chr9	106586085	106586298	-31808419	+	OldhAT1	DNA	hAT-Ac	1647	1852	-996	4
chr9	106612204	106612205	chunk0205_62_1	9.21264	AR_DHT_Control	chr9	106611972	106612466	-31782251	+	MLT2F	LTR	ERVL	17	522	-141	4
chr9	106640531	106640532	chunk0205_64_1	80.36335	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	106640394	106641503	-31753214	+	L1ME2	LINE	L1	816	1940	-4475	4
chr9	106966589	106966590	chunk0205_78_1	34.7304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	106966562	106966733	-31427984	+	L2c	LINE	L2	3206	3384	-3	4
chr9	107067877	107067878	chunk0205_81_1	14.89766	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	107067660	107068087	-31326630	-	MER57B2	LTR	ERV1	0	403	1	4
chr9	107384106	107384107	chunk0205_90_1	9.10165	AR_DHT_Control	chr9	107383980	107385268	-31009449	-	L2a	LINE	L2	0	3426	2033	4
chr9	107395111	107395112	chunk0205_94_1	11.022	AR_DHT_Control	chr9	107394973	107395178	-30999539	+	MIRc	SINE	MIR	52	264	-4	4
chr9	107687882	107687883	chunk0205_110_1	6.89429	AR_DHT_Control	chr9	107687217	107687986	-30706731	-	Tigger3b	DNA	TcMar-Tigger	-439	792	1	4
chr9	107830791	107830792	chunk0205_119_1	20.41275	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	107829550	107831028	-30563689	-	L1MA4	LINE	L1	-2622	5373	3856	4
chr9	107836461	107836462	chunk0205_121_1	14.0461	AR_DHT_Control	chr9	107836449	107836572	-30558145	+	L2c	LINE	L2	3240	3363	-24	4
chr9	107858263	107858264	chunk0205_122_1	9.25776	AR_DHT_Control	chr9	107858100	107858422	-30536295	-	MER57B2	LTR	ERV1	0	403	99	4
chr9	108172545	108172546	chunk0205_138_1	21.23637	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	108171640	108173646	-30221071	-	L1PB1	LINE	L1	-1	6150	4123	4
chr9	108194257	108194258	chunk0205_141_1	13.53764	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	108193896	108194469	-30200248	+	L2a	LINE	L2	2750	3424	-2	4
chr9	108250991	108250992	chunk0205_146_1	18.36621	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	108250935	108252097	-30142620	-	L1MC1	LINE	L1	-669	5664	4503	4
chr9	108294632	108294633	chunk0205_148_1	9.55577	AR_DHT_Control	chr9	108294615	108294807	-30099910	-	MIRc	SINE	MIR	-27	241	48	4
chr9	108400904	108400905	chunk0205_150_1	15.7508	AR_DHT_Control	chr9	108400755	108401009	-29993708	-	Tigger6b	DNA	TcMar-Tigger	-1251	346	88	4
chr9	108429537	108429538	chunk0205_151_1	6.48643	AR_DHT_Control	chr9	108428625	108429953	-29964764	+	L1M4	LINE	L1	1	1309	-6208	4
chr9	108607759	108607760	chunk0205_162_1	7.95603	AR_DHT_Control	chr9	108607712	108607936	-29786781	-	MIRb	SINE	MIR	-21	247	15	4
chr9	108664619	108664620	chunk0205_164_1	11.79743	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	108664531	108664644	-29730073	+	L2a	LINE	L2	3177	3288	-87	4
chr9	108708615	108708616	chunk0205_167_1	14.02685	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	108708488	108708645	-29686072	+	MER91A	DNA	hAT-Tip100	1	186	-10	4
chr9	108789930	108789931	chunk0205_171_1	393.4406	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	108789894	108790041	-29604676	+	L2a	LINE	L2	2982	3139	-236	4
chr9	109095519	109095520	chunk0205_190_1	35.4176	AR_DHT_Control	chr9	109095424	109095649	-29299068	-	L2c	LINE	L2	-332	3055	2829	4
chr9	109100726	109100727	chunk0205_194_1	28.005	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	109100656	109100864	-29293853	+	MIRb	SINE	MIR	52	248	-20	4
chr9	109301275	109301276	chunk0205_206_1	163.9267	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	109301225	109301333	-29093384	-	L1MC5a	LINE	L1	-26	2751	2625	4
chr9	109316531	109316532	chunk0205_209_1	8.74247	AR_DHT_Control	chr9	109316362	109316560	-29078157	+	L3b	LINE	CR1	4521	4720	-512	4
chr9	109360764	109360765	chunk0205_213_1	27.5072	AR_DHT_Control	chr9	109360716	109360885	-29033832	-	MIR	SINE	MIR	-64	198	7	4
chr9	109568598	109568599	chunk0205_218_1	4.06817	AR_DHT_Control	chr9	109567870	109572167	-28822550	+	L1PA15	LINE	L1	284	4793	-1973	4
chr9	109724307	109724308	chunk0205_220_1	63.4636	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	109724130	109724573	-28670144	+	L1M5	LINE	L1	4401	4834	-1312	4
chr9	109877597	109877598	chunk0205_222_1	7.0729	AR_DHT_Control	chr9	109877593	109877800	-28516917	-	MIR	SINE	MIR	0	262	43	4
chr9	109888262	109888263	chunk0205_225_1	188.778	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	109888201	109888399	-28506318	+	MIRb	SINE	MIR	25	223	-45	4
chr9	109976117	109976118	chunk0205_234_1	22.26216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	109976082	109976144	-28418573	+	MER96	DNA	hAT-Tip100	116	175	0	4
chr9	110151877	110151878	chunk0205_242_1	64.96167	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	110151692	110151881	-28242836	+	L5	LINE	RTE-X	2071	2265	0	4
chr9	110194453	110194454	chunk0205_246_1	22.17584	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	110194170	110194554	-28200163	-	MER4C	LTR	ERV1	-16	449	31	4
chr9	110346525	110346526	chunk0205_250_1	6.48643	AR_DHT_Control	chr9	110346425	110346571	-28048146	-	MER58A	DNA	hAT-Charlie	-5	219	12	4
chr9	110631594	110631595	chunk0205_251_1	9.38051	AR_DHT_Control	chr9	110631035	110631828	-27762889	-	L1M5	LINE	L1	-911	5235	4366	4
chr9	110992642	110992643	chunk0205_261_1	16.7908	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	110992018	110993004	-27401713	+	L1ME1	LINE	L1	5279	6464	0	4
chr9	111348968	111348969	chunk0205_264_1	65.03016	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	111348839	111349316	-27045401	+	LTR44	LTR	ERV1	1	519	0	4
chr9	111350018	111350019	chunk0205_266_1	18.15978	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	111349653	111350219	-27044498	-	L1ME1	LINE	L1	-109	6070	5428	4
chr9	111460291	111460292	chunk0205_272_1	23.87874	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	111459792	111460928	-26933789	+	L1M5	LINE	L1	3479	4646	-1500	4
chr9	111481874	111481875	chunk0205_275_1	9.25272	AR_DHT_Control	chr9	111481530	111482133	-26912584	+	L1MB3	LINE	L1	5584	6183	0	4
chr9	111605501	111605502	chunk0205_281_1	56.414	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	111605353	111605897	-26788820	+	L1MC4	LINE	L1	7157	7747	-295	4
chr9	111729032	111729033	chunk0205_283_1	11.83473	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	111728845	111729108	-26665609	-	Tigger1	DNA	TcMar-Tigger	0	2418	2162	4
chr9	111857693	111857694	chunk0205_285_1	21.09869	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	111857691	111857905	-26536812	-	LTR104_Mam	LTR	Gypsy	-141	1368	1158	4
chr9	111887300	111887301	chunk0205_286_1	6.3364	AR_DHT_Control	chr9	111887080	111887333	-26507384	-	AluJb	SINE	Alu	-18	294	1	4
chr9	111949391	111949392	chunk0205_293_1	6.73207	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	111949199	111949400	-26445317	+	ERVL-B4-int	LTR	ERVL	443	662	-5005	4
chr9	111961621	111961622	chunk0205_294_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	111961519	111961630	-26433087	-	L1MD	LINE	L1	-2880	3266	3150	4
chr9	112065865	112065866	chunk0205_298_1	6.58498	AR_DHT_Control	chr9	112065842	112065909	-26328808	+	MIR	SINE	MIR	187	254	-8	4
chr9	112185086	112185087	chunk0205_302_1	8.95381	AR_DHT_Control	chr9	112184552	112185295	-26209422	-	L1ME3	LINE	L1	-6	6156	5390	4
chr9	112383678	112383679	chunk0205_304_1	13.2903	AR_DHT_Control	chr9	112383444	112383717	-26011000	-	L1M5	LINE	L1	-1115	5031	4757	4
chr9	112397051	112397052	chunk0205_305_1	117.2754	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	112392990	112399089	-25995628	-	HERVK11-int	LTR	ERVK	0	7953	1	4
chr9	112562660	112562661	chunk0205_309_1	6.37162	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	112562436	112562702	-25832015	+	LTR86C	LTR	ERVL	244	517	-104	4
chr9	112714891	112714892	chunk0205_316_1	66.74898	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	112714772	112715030	-25679687	-	Tigger3	DNA	TcMar-Tigger	-3	3026	2757	4
chr9	112756879	112756880	chunk0205_319_1	29.0879	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	112756870	112757648	-25637069	-	L1MA9	LINE	L1	-38	6274	5508	4
chr9	112782435	112782436	chunk0205_322_1	168.7112	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	112782365	112782511	-25612206	+	MER58B	DNA	hAT-Charlie	177	341	0	4
chr9	112814828	112814829	chunk0205_323_1	5.48927	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	112814539	112815025	-25579692	+	L1ME3Cz	LINE	L1	112	653	-239	4
chr9	113122747	113122748	chunk0205_333_1	11.5684	AR_DHT_Control	chr9	113122578	113123001	-25271716	+	MER41D	LTR	ERV1	1	376	-181	4
chr9	113151961	113151962	chunk0205_334_1	23.37497	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	113151764	113151967	-25242750	+	AluJo	SINE	Alu	86	306	-6	4
chr9	113233132	113233133	chunk0205_337_1	4.77556	AR_DHT_Control	chr9	113233132	113233236	-25161481	-	MIR	SINE	MIR	-79	183	72	4
chr9	113357109	113357110	chunk0205_347_1	8.40336	AR_DHT_Control	chr9	113356521	113357242	-25037475	-	L2a	LINE	L2	-621	2798	2071	4
chr9	113399289	113399290	chunk0205_348_1	26.6735	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	113399086	113399319	-24995398	+	MIRb	SINE	MIR	1	268	0	4
chr9	113470269	113470270	chunk0205_352_1	21.3992	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	113470174	113470685	-24924032	-	L1MEg	LINE	L1	-3421	2725	2214	4
chr9	113522015	113522016	chunk0205_358_1	51.8012	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	113521987	113522053	-24872664	-	L5	LINE	RTE-X	-12	2253	2182	4
chr9	113592945	113592946	chunk0205_361_1	105.7924	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	113592841	113593064	-24801653	-	MIR	SINE	MIR	0	262	35	4
chr9	113712217	113712218	chunk0205_366_1	23.2923	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	113712139	113712346	-24682371	-	MIRb	SINE	MIR	0	262	19	4
chr9	113974039	113974040	chunk0205_372_1	7.29426	AR_DHT_Control	chr9	113973976	113974501	-24420216	-	L2a	LINE	L2	0	3426	2787	4
chr9	113979836	113979837	chunk0205_374_1	85.92647	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	113979686	113979867	-24414850	-	L2a	LINE	L2	-1	3425	3220	4
chr9	114328727	114328728	chunk0205_384_1	6.5427	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	114328714	114329024	-24065693	+	AluSp	SINE	Alu	1	304	-9	4
chr9	114352139	114352140	chunk0205_385_1	40.4824	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	114351872	114352315	-24042402	+	L1MD1	LINE	L1	5792	6239	-3	4
chr9	114457171	114457172	chunk0205_393_1	122.9391	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	114456842	114457633	-23937084	+	L1MC4a	LINE	L1	6409	7214	-668	4
chr9	114555725	114555726	chunk0205_396_1	6.49378	AR_DHT_Control	chr9	114555658	114555791	-23838926	-	MER91A	DNA	hAT-Tip100	-26	170	28	4
chr9	114558681	114558682	chunk0205_397_1	5.89231	AR_DHT_Control	chr9	114558077	114558691	-23836026	+	MER92B	LTR	ERV1	7	636	0	4
chr9	114587082	114587083	chunk0205_400_1	80.1914	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	114586952	114587216	-23807501	+	L2a	LINE	L2	3114	3413	-13	4
chr9	114769272	114769273	chunk0205_405_1	5.59693	AR_DHT_Control	chr9	114769232	114769573	-23625144	+	(TG)n	Simple_repeat	Simple_repeat	1	347	0	4
chr9	114969460	114969461	chunk0205_413_1	81.66365	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	114969398	114969875	-23424842	+	MLT1J	LTR	ERVL-MaLR	5	499	-13	4
chr9	114986374	114986375	chunk0205_417_1	9.01503	AR_DHT_Control	chr9	114986331	114986547	-23408170	-	MIRb	SINE	MIR	-15	253	2	4
chr9	114996339	114996340	chunk0205_419_1	66.608	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	114996328	114996474	-23398243	-	MIRc	SINE	MIR	-40	228	58	4
chr9	115071063	115071064	chunk0205_426_1	14.0166	AR_DHT_Control	chr9	115070870	115071171	-23323546	+	L2c	LINE	L2	3061	3387	0	4
chr9	115199594	115199595	chunk0205_432_1	31.0959	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	115199583	115199626	-23195091	+	(TATCTC)n	Simple_repeat	Simple_repeat	1	43	0	4
chr9	115257179	115257180	chunk0205_436_1	7.37742	AR_DHT_Control	chr9	115257115	115257322	-23137395	+	(ACAGAC)n	Simple_repeat	Simple_repeat	1	211	0	4
chr9	115359651	115359652	chunk0205_442_1	5.6425	AR_DHT_Control	chr9	115359382	115359857	-23034860	-	L2b	LINE	L2	0	3375	2934	4
chr9	115485071	115485072	chunk0205_448_1	23.50874	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	115484592	115485114	-22909603	+	L1ME4b	LINE	L1	348	878	-14	4
chr9	115526128	115526129	chunk0206_1_1	24.16178	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	115526106	115526242	-22868475	+	MIRb	SINE	MIR	80	222	-46	4
chr9	115591974	115591975	chunk0206_3_1	5.36932	AR_DHT_Control	chr9	115591853	115592158	-22802559	+	AluJr	SINE	Alu	1	312	0	4
chr9	115670427	115670428	chunk0206_11_1	40.2184	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	115670404	115670455	-22724262	+	(CTTACA)n	Simple_repeat	Simple_repeat	1	51	0	4
chr9	115684050	115684051	chunk0206_13_1	35.4142	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	115681224	115684319	-22710398	-	L1MEc	LINE	L1	-1478	4841	1655	4
chr9	115689901	115689902	chunk0206_15_1	143.3943	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	115689788	115690122	-22704595	+	MamRep434	DNA	TcMar-Tigger	27	371	-55	4
chr9	115740717	115740718	chunk0206_17_1	10.1096	AR_DHT_Control	chr9	115740717	115740916	-22653801	+	L3	LINE	CR1	3709	3926	-173	4
chr9	115979017	115979018	chunk0206_23_1	9.19742	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	115978936	115979201	-22415516	+	MIR	SINE	MIR	3	262	0	4
chr9	116435526	116435527	chunk0206_32_1	11.5325	AR_DHT_Control	chr9	116435504	116435540	-21959177	+	(CTTTTCA)n	Simple_repeat	Simple_repeat	1	38	0	4
chr9	116525305	116525306	chunk0206_37_1	16.9335	AR_DHT_Control	chr9	116524909	116525334	-21869383	+	THE1D-int	LTR	ERVL-MaLR	14	433	-1198	4
chr9	116666826	116666827	chunk0206_39_1	13.2699	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	116666752	116666946	-21727771	+	L1MC5a	LINE	L1	2207	2395	-382	4
chr9	117466531	117466532	chunk0206_46_1	5.54137	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	117466520	117467228	-20927489	-	L1ME3G	LINE	L1	-218	706	2	4
chr9	117491663	117491664	chunk0206_48_1	103.3531	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	117491637	117491828	-20902889	+	MER58A	DNA	hAT-Charlie	6	201	-23	4
chr9	117599024	117599025	chunk0206_50_1	5.73594	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	117598399	117599821	-20794896	+	L1MA5	LINE	L1	643	1996	-5172	4
chr9	117930149	117930150	chunk0206_53_1	39.81538	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	117929961	117930254	-20464463	+	MLT1I	LTR	ERVL-MaLR	77	408	-3	4
chr9	117945026	117945027	chunk0206_54_1	11.0973	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	117944601	117945189	-20449528	-	LTR10C	LTR	ERV1	0	591	1	4
chr9	118966173	118966174	chunk0206_59_1	6.98475	AR_DHT_Control	chr9	118966142	118966371	-19428346	-	MIR	SINE	MIR	-33	229	2	4
chr9	119853335	119853336	chunk0206_68_1	12.12965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	119853297	119853589	-18541128	-	L2a	LINE	L2	-5	3421	3114	4
chr9	119866490	119866491	chunk0206_70_1	11.8776	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	119863917	119867593	-18527124	+	L1PA16	LINE	L1	2551	6166	0	4
chr9	119968101	119968102	chunk0206_74_1	17.41685	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	119967953	119968289	-18426428	-	L2c	LINE	L2	0	3387	3057	4
chr9	120015039	120015040	chunk0206_80_1	19.0746	AR_DHT_Control	chr9	120014895	120015135	-18379582	+	MIR	SINE	MIR	2	256	-6	4
chr9	120486683	120486684	chunk0206_83_1	12.7653	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	120486652	120486970	-17907747	-	L2c	LINE	L2	-154	3233	2894	4
chr9	120532626	120532627	chunk0206_85_1	11.0426	AR_DHT_Control	chr9	120532558	120532631	-17862086	+	MamRep605	LTR?	LTR?	472	544	-305	4
chr9	120618325	120618326	chunk0206_89_1	4.89968	AR_DHT_Control	chr9	120617449	120618409	-17776308	-	L2	LINE	L2	-414	3005	2054	4
chr9	120620569	120620570	chunk0206_90_1	6.35432	AR_DHT_Control	chr9	120620360	120620846	-17773871	-	L2c	LINE	L2	-1	3386	2915	4
chr9	120628835	120628836	chunk0206_92_1	160.91213	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;Merged_Lncap_AR_Veh	chr9	120628495	120628894	-17765823	-	LTR40a	LTR	ERVL	-104	415	1	4
chr9	120707335	120707336	chunk0206_96_1	7.03383	AR_DHT_Control	chr9	120707233	120707571	-17687146	+	MER46C	DNA	TcMar-Tigger	4	333	-5	4
chr9	120837991	120837992	chunk0206_110_1	28.4791	AR_DHT_Control	chr9	120837630	120838297	-17556420	+	L1ME1	LINE	L1	5524	6179	0	4
chr9	120890010	120890011	chunk0206_115_1	10.2697	AR_DHT_Control	chr9	120889941	120890035	-17504682	+	MIRc	SINE	MIR	120	241	-27	4
chr9	120985942	120985943	chunk0206_129_1	39.84344	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	120985779	120986208	-17408509	+	LTR38A1	LTR	ERV1	131	543	0	4
chr9	121082525	121082526	chunk0206_135_1	17.3522	AR_DHT_Control	chr9	121082469	121082689	-17312028	-	Tigger3b	DNA	TcMar-Tigger	0	1231	977	4
chr9	121083771	121083772	chunk0206_136_1	111.0812	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	121082994	121083935	-17310782	-	Tigger3b	DNA	TcMar-Tigger	-255	976	1	4
chr9	121090665	121090666	chunk0206_138_1	51.4633	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	121090611	121090806	-17303911	+	MER58A	DNA	hAT-Charlie	2	198	-26	4
chr9	121189930	121189931	chunk0206_142_1	23.6025	AR_DHT_Control	chr9	121189805	121190012	-17204705	+	Tigger19b	DNA	TcMar-Tigger	210	434	-116	4
chr9	121357167	121357168	chunk0206_144_1	51.6008	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	121357118	121357264	-17037453	-	L1M5	LINE	L1	-312	5812	5657	4
chr9	121363731	121363732	chunk0206_146_1	42.7122	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	121363437	121363732	-17030985	-	MER58B	DNA	hAT-Charlie	-3	338	17	4
chr9	121537411	121537412	chunk0206_156_1	42.37022	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	121537328	121537460	-16857257	-	AluJb	SINE	Alu	-183	129	1	4
chr9	121610474	121610475	chunk0206_159_1	5.17077	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	121610324	121610565	-16784152	-	MIR	SINE	MIR	-2	260	2	4
chr9	121739055	121739056	chunk0206_163_1	9.74315	AR_DHT_Control	chr9	121738968	121739086	-16655631	+	L2a	LINE	L2	3295	3424	-2	4
chr9	122217887	122217888	chunk0206_166_1	8.01864	AR_DHT_Control	chr9	122217841	122217936	-16176781	+	MIR	SINE	MIR	71	162	-100	4
chr9	122244621	122244622	chunk0206_167_1	5.24411	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	122244557	122244636	-16150081	+	MIRb	SINE	MIR	189	268	0	4
chr9	122274927	122274928	chunk0206_169_1	11.49845	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	122274575	122274987	-16119730	-	L1MEi	LINE	L1	-2626	3520	3028	4
chr9	122279370	122279371	chunk0206_171_1	13.65357	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	122279260	122279454	-16115263	+	MIRc	SINE	MIR	69	259	-9	4
chr9	122291989	122291990	chunk0206_173_1	8.01864	AR_DHT_Control	chr9	122291983	122292320	-16102397	-	L2a	LINE	L2	-1	3425	3038	4
chr9	122305820	122305821	chunk0206_174_1	11.7067	AR_DHT_Control	chr9	122305694	122305892	-16088825	+	L2a	LINE	L2	3198	3405	-21	4
chr9	122390401	122390402	chunk0206_176_1	18.96699	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	122390363	122390616	-16004101	-	L2c	LINE	L2	-71	3316	3038	4
chr9	122401494	122401495	chunk0206_177_1	10.802	AR_DHT_Control	chr9	122401228	122401658	-15993059	-	L1ME3	LINE	L1	-3	6159	5704	4
chr9	122815803	122815804	chunk0206_182_1	9.29973	AR_DHT_Control	chr9	122815738	122815943	-15578774	-	MIR	SINE	MIR	-10	252	37	4
chr9	122860971	122860972	chunk0206_186_1	8.52761	AR_DHT_Control	chr9	122860885	122861009	-15533708	+	L2a	LINE	L2	3303	3425	-1	4
chr9	122888834	122888835	chunk0206_187_1	7.36432	AR_DHT_Control	chr9	122888044	122889030	-15505687	-	L1MC5a	LINE	L1	-1552	1225	186	4
chr9	122996809	122996810	chunk0206_195_1	6.6351	AR_DHT_Control	chr9	122996790	122996939	-15397778	+	MIRc	SINE	MIR	118	268	0	4
chr9	123049991	123049992	chunk0206_202_1	136.6309	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	123049821	123050040	-15344677	-	MIRb	SINE	MIR	-31	237	17	4
chr9	123061507	123061508	chunk0206_203_1	37.87322	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	123061416	123061575	-15333142	+	MER58A	DNA	hAT-Charlie	44	215	-9	4
chr9	123089331	123089332	chunk0206_206_1	49.07854	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	123089224	123089461	-15305256	+	MIR	SINE	MIR	7	262	0	4
chr9	123208834	123208835	chunk0206_212_1	10.1791	AR_DHT_Control	chr9	123208802	123209173	-15185544	-	L1MEc	LINE	L1	-5942	458	56	4
chr9	123309669	123309670	chunk0206_218_1	27.60613	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	123309473	123309937	-15084780	+	MLT1C	LTR	ERVL-MaLR	1	467	0	4
chr9	123467167	123467168	chunk0206_229_1	105.0455	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	123467098	123467373	-14927344	-	MER45B	DNA	hAT-Tip100	-617	423	134	4
chr9	123538039	123538040	chunk0206_230_1	13.9716	AR_DHT_Control	chr9	123536493	123538740	-14855977	+	L1MC5	LINE	L1	286	2499	-492	4
chr9	123594772	123594773	chunk0206_235_1	51.4323	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	123594648	123594777	-14799940	-	MIRb	SINE	MIR	-111	157	16	4
chr9	123633290	123633291	chunk0206_238_1	69.84885	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	123633226	123633367	-14761350	+	L2b	LINE	L2	3214	3374	-1	4
chr9	123686954	123686955	chunk0206_246_1	8.84892	AR_DHT_Control	chr9	123686896	123687075	-14707642	-	X2_LINE	LINE	CR1	-60	1348	1169	4
chr9	123740149	123740150	chunk0206_247_1	8.35541	AR_DHT_Control	chr9	123740118	123740192	-14654525	+	L1PA11	LINE	L1	6096	6174	0	4
chr9	123746062	123746063	chunk0206_248_1	115.6446	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	123746044	123746182	-14648535	+	L1ME3B	LINE	L1	6101	6231	-11	4
chr9	123753849	123753850	chunk0206_249_1	5.26765	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	123753690	123753923	-14640794	-	L2c	LINE	L2	-42	3345	3080	4
chr9	123778652	123778653	chunk0206_253_1	4.83274	AR_DHT_Control	chr9	123778554	123778759	-14615958	-	MER58C	DNA	hAT-Charlie	-1	214	3	4
chr9	123822963	123822964	chunk0206_259_1	5.08049	AR_DHT_Control	chr9	123822946	123823034	-14571683	-	MIRb	SINE	MIR	-30	238	145	4
chr9	123941901	123941902	chunk0206_264_1	85.675	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	123941880	123941932	-14452785	+	(CA)n	Simple_repeat	Simple_repeat	1	52	0	4
chr9	124038513	124038514	chunk0206_268_1	81.3881	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	124038493	124038598	-14356119	-	L1MC5a	LINE	L1	-9	2768	2667	4
chr9	124064298	124064299	chunk0206_269_1	63.3926	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	124064116	124064731	-14329986	-	Tigger13a	DNA	TcMar-Tigger	-76	695	14	4
chr9	124078019	124078020	chunk0206_271_1	20.5547	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	124078015	124078099	-14316618	-	MamRTE1	LINE	RTE-BovB	-657	3155	3070	4
chr9	124226147	124226148	chunk0206_276_1	46.49386	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	124225851	124226562	-14168155	+	L1MC4	LINE	L1	6554	7271	-771	4
chr9	124357029	124357030	chunk0206_279_1	104.2531	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	124357008	124357090	-14037627	-	MIRb	SINE	MIR	-94	174	95	4
chr9	124563423	124563424	chunk0206_292_1	25.3199	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	124563416	124563593	-13831124	+	MIR	SINE	MIR	57	240	-22	4
chr9	124632483	124632484	chunk0206_295_1	41.8648	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	124631659	124632561	-13762156	-	L1PA12	LINE	L1	0	6168	5254	4
chr9	124639150	124639151	chunk0206_296_1	14.6688	AR_DHT_Control	chr9	124639027	124639262	-13755455	-	MIR	SINE	MIR	-1	261	18	4
chr9	124674140	124674141	chunk0206_297_1	82.5238	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	124673969	124674174	-13720543	+	MIRb	SINE	MIR	53	267	-1	4
chr9	124950283	124950284	chunk0206_309_1	7.92366	AR_DHT_Control	chr9	124950260	124950437	-13444280	-	MIR3	SINE	MIR	-9	199	12	4
chr9	125067325	125067326	chunk0206_310_1	6.48643	AR_DHT_Control	chr9	125067203	125067673	-13327044	+	MLT1C	LTR	ERVL-MaLR	5	431	-36	4
chr9	125113235	125113236	chunk0206_313_1	8.27376	AR_DHT_Control	chr9	125112657	125113553	-13281164	+	L1MC3	LINE	L1	6688	7619	-166	4
chr9	125178114	125178115	chunk0206_318_1	59.6783	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	125177555	125178506	-13216211	-	L1MC1	LINE	L1	-66	6267	5291	4
chr9	125392559	125392560	chunk0206_333_1	29.70279	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	125392367	125392623	-13002094	+	MIR	SINE	MIR	2	259	-3	4
chr9	125482352	125482353	chunk0206_334_1	33.098	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	125482166	125482462	-12912255	-	L1ME3A	LINE	L1	-27	6146	5852	4
chr9	125580927	125580928	chunk0206_346_1	9.21264	AR_DHT_Control	chr9	125580694	125581876	-12812841	-	L1MD2	LINE	L1	-181	6178	4878	4
chr9	125797559	125797560	chunk0206_361_1	33.1687	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	125797553	125797795	-12596922	-	L1MA9	LINE	L1	-38	6274	6035	4
chr9	125991157	125991158	chunk0206_371_1	12.9225	AR_DHT_Control	chr9	125990926	125991242	-12403475	+	L2a	LINE	L2	3040	3412	-14	4
chr9	126204925	126204926	chunk0206_374_1	4.76708	AR_DHT_Control	chr9	126204548	126205375	-12189342	+	(TG)n	Simple_repeat	Simple_repeat	1	859	0	4
chr9	126357187	126357188	chunk0206_375_1	27.51782	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	126357027	126359061	-12035656	-	L1ME1	LINE	L1	-179	7419	5289	4
chr9	126704855	126704856	chunk0206_381_1	6.06371	AR_DHT_Control	chr9	126704685	126704887	-11689830	-	L2c	LINE	L2	-212	3175	2941	4
chr9	126725861	126725862	chunk0206_382_1	30.47881	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	126725656	126726474	-11668243	-	L1ME3C	LINE	L1	-88	6035	5204	4
chr9	126919064	126919065	chunk0206_388_1	16.07035	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	126919041	126919090	-11475627	-	L1ME4b	LINE	L1	-105	787	739	4
chr9	126985334	126985335	chunk0206_390_1	5.98931	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	126985300	126985429	-11409288	+	MLT1H	LTR	ERVL-MaLR	319	539	-10	4
chr9	127024259	127024260	chunk0206_393_1	11.0019	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	127024231	127024430	-11370287	-	HAL1ME	LINE	L1	-2	2505	2218	4
chr9	127025048	127025049	chunk0206_394_1	8.67138	AR_DHT_Control	chr9	127024920	127025687	-11369030	-	L1ME1	LINE	L1	-15	6164	5332	4
chr9	127113316	127113317	chunk0206_399_1	4.70374	AR_DHT_Control	chr9	127113125	127113317	-11281400	-	MIRb	SINE	MIR	-41	227	25	4
chr9	127178761	127178762	chunk0206_402_1	132.9643	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	127178676	127178816	-11215901	+	MER58A	DNA	hAT-Charlie	65	204	-20	4
chr9	127453773	127453774	chunk0206_413_1	23.73989	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	127453766	127453866	-10940851	-	L2b	LINE	L2	-5	3370	3260	4
chr9	127540603	127540604	chunk0206_418_1	14.42979	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	127540477	127540693	-10854024	-	MIRb	SINE	MIR	-30	238	21	4
chr9	127570586	127570587	chunk0206_420_1	7.11165	AR_DHT_Control	chr9	127570415	127570587	-10824130	+	MIRb	SINE	MIR	88	268	0	4
chr9	127583631	127583632	chunk0206_427_1	12.2933	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	127583481	127584036	-10810681	-	L1ME2	LINE	L1	-337	5905	5374	4
chr9	127740596	127740597	chunk0206_428_1	11.5199	AR_DHT_Control	chr9	127740540	127740670	-10654047	-	MIRb	SINE	MIR	-117	151	19	4
chr9	127784899	127784900	chunk0206_430_1	5.03783	AR_DHT_Control	chr9	127784761	127784983	-10609734	+	MIRb	SINE	MIR	6	265	-3	4
chr9	127822341	127822342	chunk0206_433_1	74.04593	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	127822222	127822821	-10571896	+	L1ME4c	LINE	L1	312	726	-104	4
chr9	127914011	127914012	chunk0206_437_1	7.58304	AR_DHT_Control	chr9	127913971	127914104	-10480613	+	AluSx	SINE	Alu	175	303	-9	4
chr9	128017133	128017134	chunk0206_443_1	110.7826	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	128016911	128017778	-10376939	+	L1MC3	LINE	L1	6863	7715	-70	4
chr9	128055927	128055928	chunk0206_445_1	30.39905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	128055820	128056015	-10338702	+	MLT1G1	LTR	ERVL-MaLR	374	579	0	4
chr9	128074723	128074724	chunk0206_448_1	22.7654	AR_DHT_Control	chr9	128074426	128074730	-10319987	+	AluSx	SINE	Alu	1	308	-4	4
chr9	128378675	128378676	chunk0206_455_1	6.93299	AR_DHT_Control	chr9	128378672	128378970	-10015747	+	AluSz6	SINE	Alu	1	306	-6	4
chr9	128397055	128397056	chunk0206_458_1	48.82489	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	128397035	128397099	-9997618	-	L2c	LINE	L2	-3	3423	3306	4
chr9	128433811	128433812	chunk0206_459_1	5.58563	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	128433680	128433880	-9960837	+	MIRb	SINE	MIR	34	259	-9	4
chr9	128802653	128802654	chunk0207_108_1	147.7599	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	128802558	128802714	-9592003	-	L1MC5a	LINE	L1	-491	2286	2127	4
chr9	128840893	128840894	chunk0207_111_1	27.5078	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	128840847	128841086	-9553631	+	L1ME4b	LINE	L1	5602	5822	-302	4
chr9	128874613	128874614	chunk0207_116_1	21.34552	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	128874609	128874722	-9519995	-	Tigger6a	DNA	TcMar-Tigger	-346	737	646	4
chr9	128880032	128880033	chunk0207_120_1	85.8734	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	128880022	128880074	-9514643	+	MIR	SINE	MIR	94	150	-112	4
chr9	128920483	128920484	chunk0207_123_1	9.50008	AR_DHT_Control	chr9	128920433	128920565	-9474152	-	MIRb	SINE	MIR	-12	256	124	4
chr9	128992748	128992749	chunk0207_124_1	10.9705	AR_DHT_Control	chr9	128992625	128993025	-9401692	-	L1ME4b	LINE	L1	-380	5743	5342	4
chr9	129027182	129027183	chunk0207_125_1	15.9625	AR_DHT_Control	chr9	129027110	129027200	-9367517	-	MIRb	SINE	MIR	-70	198	91	4
chr9	129052717	129052718	chunk0207_128_1	16.53625	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	129052601	129052725	-9341992	-	LTR33A_	LTR	ERVL	-314	217	83	4
chr9	129327973	129327974	chunk0207_135_1	6.66161	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	129327714	129327984	-9066733	-	Charlie19a	DNA	hAT-Charlie	-31	355	61	4
chr9	129456657	129456658	chunk0207_141_1	4.53037	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	129456631	129457679	-8937038	+	(ATGG)n	Simple_repeat	Simple_repeat	1	1067	0	4
chr9	129836484	129836485	chunk0207_152_1	7.37742	AR_DHT_Control	chr9	129836479	129836521	-8558196	+	L2b	LINE	L2	3321	3364	-11	4
chr9	130047929	130047930	chunk0207_157_1	9.07197	AR_DHT_Control	chr9	130047918	130048037	-8346680	+	MIR	SINE	MIR	34	157	-111	4
chr9	130539004	130539005	chunk0207_177_1	6.0927	AR_DHT_Control	chr9	130538963	130539188	-7855529	-	MIRb	SINE	MIR	-34	234	2	4
chr9	130695367	130695368	chunk0207_178_1	6.37684	AR_DHT_Control	chr9	130695091	130695417	-7699300	-	L2a	LINE	L2	-90	3336	3002	4
chr9	130731573	130731574	chunk0207_182_1	26.3373	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	130731305	130731846	-7662871	-	L1M5	LINE	L1	-942	5204	4567	4
chr9	130834109	130834110	chunk0207_189_1	35.00356	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	130833987	130834233	-7560484	+	MIRb	SINE	MIR	4	262	-6	4
chr9	130961981	130961982	chunk0207_195_1	42.69545	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	130961908	130962013	-7432704	+	(CAGGTA)n	Simple_repeat	Simple_repeat	1	101	0	4
chr9	131145581	131145582	chunk0207_199_1	42.0941	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	131145524	131145635	-7249082	-	L1ME3G	LINE	L1	-2074	5808	5716	4
chr9	131167439	131167440	chunk0207_202_1	23.64053	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	131167152	131167669	-7227048	-	L1ME3B	LINE	L1	-233	6009	5455	4
chr9	131349936	131349937	chunk0207_206_1	5.99997	AR_DHT_Control	chr9	131349904	131350280	-7044437	-	L2b	LINE	L2	-1	3386	2994	4
chr9	131618248	131618249	chunk0207_217_1	16.6691	AR_DHT_Control	chr9	131617993	131618478	-6776239	+	MLT1H	LTR	ERVL-MaLR	5	549	0	4
chr9	131636133	131636134	chunk0207_218_1	14.7397	AR_DHT_Control	chr9	131636020	131636300	-6758417	+	L2c	LINE	L2	3098	3386	-1	4
chr9	131897659	131897660	chunk0207_230_1	30.3818	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	131897438	131897779	-6496938	+	L1MC5	LINE	L1	8950	9300	-4	4
chr9	131952102	131952103	chunk0207_237_1	8.57499	AR_DHT_Control	chr9	131952048	131952221	-6442496	+	LTR33	LTR	ERVL	1	189	-326	4
chr9	132009212	132009213	chunk0207_241_1	6.21736	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	132009096	132009236	-6385481	+	L2c	LINE	L2	3256	3387	0	4
chr9	132086835	132086836	chunk0207_251_1	24.1057	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	132086815	132087052	-6307665	-	L2c	LINE	L2	-57	3330	3074	4
chr9	132224770	132224771	chunk0207_258_1	233.3751	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	132224740	132224924	-6169793	-	L1MC5	LINE	L1	0	9304	9093	4
chr9	132282882	132282883	chunk0207_262_1	65.5471	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	132282861	132282902	-6111815	+	L2b	LINE	L2	3334	3374	-1	4
chr9	132309220	132309221	chunk0207_265_1	61.9112	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	132309162	132309413	-6085304	+	L1M5	LINE	L1	4712	4971	-1175	4
chr9	132358139	132358140	chunk0207_267_1	36.1122	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	132357970	132358152	-6036565	-	L1M4	LINE	L1	-1413	5231	5058	4
chr9	132373371	132373372	chunk0207_270_1	5.6503	AR_DHT_Control	chr9	132373314	132373383	-6021334	+	L2b	LINE	L2	3297	3365	-10	4
chr9	132408690	132408691	chunk0207_275_1	11.4753	AR_DHT_Control	chr9	132408540	132408933	-5985784	+	LTR46	LTR	ERV1	1	459	-1	4
chr9	132431247	132431248	chunk0207_277_1	6.22495	AR_DHT_Control	chr9	132430726	132431748	-5962969	+	L1MEb	LINE	L1	30	1087	-5007	4
chr9	132703544	132703545	chunk0207_282_1	19.2046	AR_DHT_Control	chr9	132703235	132703757	-5690960	+	MER101-int	LTR	ERV1	2760	3328	-3311	4
chr9	133089351	133089352	chunk0207_290_1	263.3699	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	133089331	133089365	-5305352	+	MER51E	LTR	ERV1	43	76	-406	4
chr9	133264396	133264397	chunk0207_296_1	24.90829	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	133264168	133264739	-5129978	-	L1ME2	LINE	L1	-235	5929	5313	4
chr9	133593205	133593206	chunk0207_307_1	11.1005	AR_DHT_Control	chr9	133593154	133593233	-4801484	-	MIRc	SINE	MIR	-109	159	70	4
chr9	133743661	133743662	chunk0207_309_1	34.3561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	133743320	133743704	-4651013	-	L1M4c	LINE	L1	-2331	4045	3676	4
chr9	133942077	133942078	chunk0207_317_1	14.5125	AR_DHT_Control	chr9	133941904	133942166	-4452551	+	L1MB3	LINE	L1	5912	6182	-1	4
chr9	134182991	134182992	chunk0207_322_1	19.93498	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	134182440	134183092	-4211625	+	(TG)n	Simple_repeat	Simple_repeat	1	714	0	4
chr9	134300069	134300070	chunk0207_330_1	6.17841	AR_DHT_Control	chr9	134299771	134300293	-4094424	-	MLT1F	LTR	ERVL-MaLR	0	548	1	4
chr9	134375236	134375237	chunk0207_337_1	72.03853	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	134374893	134375272	-4019445	-	L2b	LINE	L2	-8	3418	2960	4
chr9	134895315	134895316	chunk0207_345_1	8.90508	AR_DHT_Control	chr9	134895230	134895740	-3498977	+	MLT1J2-int	LTR	ERVL-MaLR	1	585	-802	4
chr9	135170156	135170157	chunk0207_352_1	7.12698	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	135169814	135170222	-3224495	+	(TGTG)n	Simple_repeat	Simple_repeat	1	408	0	4
chr9	135393738	135393739	chunk0207_361_1	23.4446	AR_DHT_Control	chr9	135393700	135393750	-3000967	+	(AC)n	Simple_repeat	Simple_repeat	1	50	0	4
chr9	135774499	135774500	chunk0207_363_1	10.04729	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	135774026	135774671	-2620046	+	(TGTGTGT)n	Simple_repeat	Simple_repeat	1	667	0	4
chr9	136032298	136032299	chunk0207_377_1	48.86694	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	136032175	136032614	-2362103	+	L1ME1	LINE	L1	3744	4238	-1908	4
chr9	136036974	136036975	chunk0207_378_1	8.56826	AR_DHT_Control	chr9	136036673	136037156	-2357561	+	L1MEf	LINE	L1	1172	1711	-4704	4
chr9	136051936	136051937	chunk0207_379_1	4.83636	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	136051876	136051939	-2342778	+	(AGG)n	Simple_repeat	Simple_repeat	1	64	0	4
chr9	136409880	136409881	chunk0207_385_1	7.57442	AR_DHT_Control	chr9	136409841	136410012	-1984705	+	L2c	LINE	L2	3172	3385	-2	4
chr9	136615558	136615559	chunk0207_389_1	27.99676	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	136615318	136615641	-1779076	-	MLT1B	LTR	ERVL-MaLR	0	390	23	4
chr9	136631306	136631307	chunk0207_392_1	5.61501	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	136630736	136631565	-1763152	+	(ACAC)n	Simple_repeat	Simple_repeat	1	831	0	4
chr9	136679839	136679840	chunk0207_394_1	14.01264	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	136679688	136679859	-1714858	+	L1ME3G	LINE	L1	152	329	-595	4
chr9	136695577	136695578	chunk0207_396_1	18.73365	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	136695546	136695582	-1699135	+	G-rich	Low_complexity	Low_complexity	1	38	0	4
chr9	136731661	136731662	chunk0207_398_1	57.08656	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	136731570	136731871	-1662846	-	MLT1A1	LTR	ERVL-MaLR	0	408	3	4
chr9	136789621	136789622	chunk0207_399_1	7.26348	AR_DHT_Control	chr9	136788797	136789776	-1604941	-	LTR5B	LTR	ERVK	0	1002	1	4
chr9	136797247	136797248	chunk0207_400_1	10.9604	AR_DHT_Control	chr9	136796532	136797430	-1597287	+	LTR5B	LTR	ERVK	1	913	-89	4
chr9	136944647	136944648	chunk0207_404_1	5.38748	SRA814800_Lncap_AR_DHT_10nm_12hr	chr9	136944598	136944684	-1450033	+	(CCGCCC)n	Simple_repeat	Simple_repeat	1	86	0	4
chr9	136988638	136988639	chunk0207_411_1	100.9475	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	136988537	136988678	-1406039	+	L1MC3	LINE	L1	6878	7014	-771	4
chr9	137057238	137057239	chunk0207_416_1	52.9194	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	137057189	137057307	-1337410	-	L1ME3D	LINE	L1	-332	5910	5784	4
chr9	137126149	137126150	chunk0207_418_1	37.5133	AR_DHT_Control	chr9	137126022	137126345	-1268372	-	L1MB4	LINE	L1	-3379	2767	2455	4
chr9	137366050	137366051	chunk0207_432_1	6.88185	AR_DHT_Control	chr9	137365488	137366054	-1028663	+	(CA)n	Simple_repeat	Simple_repeat	1	569	0	4
chr9	137390597	137390598	chunk0207_434_1	25.5624	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	137390497	137390629	-1004088	-	MIR	SINE	MIR	-44	218	73	4
chr9	137482233	137482234	chunk0207_438_1	66.09574	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chr9	137482086	137482564	-912153	+	L1MC1	LINE	L1	5492	5981	-352	4
chr9	137690281	137690282	chunk0207_448_1	47.29106	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	137690254	137690351	-704366	-	L1ME3G	LINE	L1	-291	633	540	4
chr9	137715439	137715440	chunk0207_452_1	18.15304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chr9	137715349	137715557	-679160	-	L2a	LINE	L2	-18	3408	3192	4
chr9	137900662	137900663	chunk0207_460_1	5.36932	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	137900400	137901391	-493326	+	(TGTGTC)n	Simple_repeat	Simple_repeat	1	1053	0	4
chr9	137982871	137982872	chunk0207_461_1	45.2766	AR_DHT_Control	chr9	137982590	137982984	-411733	+	L3	LINE	CR1	2627	3077	-1022	4
chr9	138004066	138004067	chunk0207_462_1	4.83274	SRA057177_Lncap_AR_DHT_10nm_4hr	chr9	138003921	138004265	-390452	+	L1ME3Cz	LINE	L1	171	596	-328	4
chr9	138133601	138133602	chunk0207_463_1	6.48643	AR_DHT_Control	chr9	138132948	138133926	-260791	+	LTR5B	LTR	ERVK	1	1002	0	4
chrX	3213985	3213986	chunk0207_25_1	14.2911	AR_DHT_Control	chrX	3213745	3214119	-152826776	-	L1ME3F	LINE	L1	-317	5926	5575	4
chrX	4788211	4788212	chunk0207_34_1	17.6003	AR_DHT_Control	chrX	4788089	4788481	-151252414	+	MER57B2	LTR	ERV1	1	403	0	4
chrX	5985816	5985817	chunk0207_39_1	22.2669	AR_DHT_Control	chrX	5985731	5986209	-150054686	+	L1ME3B	LINE	L1	2211	2700	-3446	4
chrX	5986696	5986697	chunk0207_40_1	6.33484	AR_DHT_Control	chrX	5986434	5987398	-150053497	+	L1ME3B	LINE	L1	5011	6088	-154	4
chrX	6982237	6982238	chunk0207_44_1	9.21264	AR_DHT_Control	chrX	6982212	6982896	-149057999	-	LTR8A	LTR	ERV1	0	727	5	4
chrX	7104057	7104058	chunk0207_49_1	28.84347	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	7101750	7104576	-148936319	+	L1MB2	LINE	L1	3226	6167	-4	4
chrX	7120636	7120637	chunk0207_50_1	17.9956	AR_DHT_Control	chrX	7120583	7121149	-148919746	+	L1ME1	LINE	L1	5579	6178	-1	4
chrX	7947025	7947026	chunk0207_54_1	52.428	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	7947025	7947417	-148093478	+	MER83B	LTR	ERV1	1	377	-1	4
chrX	8844411	8844412	chunk0207_60_1	25.4906	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	8844357	8844494	-147196401	+	ORSL-2b	DNA	hAT-Tip100	9	145	-363	4
chrX	8994909	8994910	chunk0207_66_1	12.95863	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	8993307	8994992	-147045903	+	L1MA9	LINE	L1	4534	6312	0	4
chrX	9024736	9024737	chunk0207_67_1	9.21264	AR_DHT_Control	chrX	9024674	9024980	-147015915	-	AluSz	SINE	Alu	-5	307	2	4
chrX	9103137	9103138	chunk0207_69_1	195.9489	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	9102413	9103715	-146937180	+	L1MC4	LINE	L1	3792	5148	-1066	4
chrX	9165054	9165055	chunk0207_71_1	7.36432	AR_DHT_Control	chrX	9164853	9165649	-146875246	+	L1ME2z	LINE	L1	5626	6441	-3	4
chrX	9183844	9183845	chunk0207_73_1	29.5086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	9183819	9184038	-146856857	-	MIRc	SINE	MIR	-39	229	7	4
chrX	9337445	9337446	chunk0207_82_1	36.38943	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	9337416	9337741	-146703154	+	L1ME3B	LINE	L1	5771	6133	-109	4
chrX	9386086	9386087	chunk0207_85_1	59.7216	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	9385986	9386200	-146654695	+	MER58B	DNA	hAT-Charlie	103	341	0	4
chrX	9629251	9629252	chunk0207_92_1	5.6503	AR_DHT_Control	chrX	9629191	9629400	-146411495	+	MER58A	DNA	hAT-Charlie	2	224	0	4
chrX	9906895	9906896	chunk0207_99_1	30.36749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	9906845	9906959	-146133936	-	MER58B	DNA	hAT-Charlie	0	341	224	4
chrX	10036451	10036452	chunk0208_1_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	10036340	10036595	-146004300	-	L1MB5	LINE	L1	-15	6159	5937	4
chrX	10176935	10176936	chunk0208_8_1	8.52761	SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	10176898	10177012	-145863883	+	L1ME3A	LINE	L1	5694	5805	-368	4
chrX	10458016	10458017	chunk0208_9_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	10457500	10458163	-145582732	+	L2b	LINE	L2	2678	3375	0	4
chrX	10762028	10762029	chunk0208_13_1	22.25424	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	10762006	10762156	-145278739	+	MIRb	SINE	MIR	100	268	0	4
chrX	10939574	10939575	chunk0208_18_1	132.0498	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	10939492	10939613	-145101282	+	L2b	LINE	L2	3246	3369	-6	4
chrX	11073635	11073636	chunk0208_25_1	74.4755	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	11073277	11074559	-144966336	+	L1MC3	LINE	L1	6545	7777	-8	4
chrX	11191333	11191334	chunk0208_29_1	23.135	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	11191325	11191447	-144849448	-	MER58A	DNA	hAT-Charlie	-65	159	37	4
chrX	11257736	11257737	chunk0208_33_1	38.5274	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	11257610	11258464	-144782431	-	L2b	LINE	L2	-1	3374	2447	4
chrX	11459259	11459260	chunk0208_50_1	4.26204	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	11459181	11459433	-144581462	-	MIR	SINE	MIR	-10	252	2	4
chrX	11478225	11478226	chunk0208_56_1	13.29402	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	11478022	11478670	-144562225	+	L1ME2	LINE	L1	5439	6154	-10	4
chrX	11559292	11559293	chunk0208_61_1	38.5477	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	11559233	11559638	-144481257	+	L2c	LINE	L2	2967	3374	-1	4
chrX	11560270	11560271	chunk0208_62_1	5.43798	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	11560162	11560364	-144480531	-	MER58A	DNA	hAT-Charlie	-15	209	2	4
chrX	11755907	11755908	chunk0208_65_1	9.08241	AR_DHT_Control	chrX	11755698	11755926	-144284969	+	L2c	LINE	L2	3134	3387	0	4
chrX	12787861	12787862	chunk0208_70_1	39.8458	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	12787831	12788143	-143252752	+	MER33	DNA	hAT-Charlie	9	313	-11	4
chrX	12934601	12934602	chunk0208_77_1	4.83532	AR_DHT_Control	chrX	12934505	12934620	-143106275	+	L2c	LINE	L2	3283	3382	-5	4
chrX	12965577	12965578	chunk0208_78_1	19.7868	AR_DHT_Control	chrX	12965244	12965974	-143074921	-	MER77B	LTR	ERVL	-170	698	1	4
chrX	13002433	13002434	chunk0208_80_1	7.36432	AR_DHT_Control	chrX	13001605	13002496	-143038399	+	Tigger3b	DNA	TcMar-Tigger	295	1230	-1	4
chrX	13094274	13094275	chunk0208_83_1	17.5939	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	13094088	13094664	-142946231	-	L1ME3	LINE	L1	0	6162	5589	4
chrX	13499379	13499380	chunk0208_93_1	51.19357	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	13498977	13499494	-142541401	-	LTR40a	LTR	ERVL	-1	518	1	4
chrX	13523986	13523987	chunk0208_94_1	43.5687	AR_DHT_Control	chrX	13523981	13524137	-142516758	-	LTR50	LTR	ERVL	-585	210	1	4
chrX	13564384	13564385	chunk0208_98_1	20.2804	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	13564326	13564511	-142476384	+	L2c	LINE	L2	3185	3386	-1	4
chrX	13731775	13731776	chunk0208_99_1	31.3987	AR_DHT_Control	chrX	13731688	13732421	-142308474	+	L3	LINE	CR1	3042	3810	-289	4
chrX	13794589	13794590	chunk0208_108_1	9.21264	AR_DHT_Control	chrX	13794465	13795733	-142245162	+	Charlie1a	DNA	hAT-Charlie	5	1338	-117	4
chrX	13811591	13811592	chunk0208_109_1	11.74304	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	13811538	13811720	-142229175	+	MER58A	DNA	hAT-Charlie	42	224	0	4
chrX	15463967	15463968	chunk0208_126_1	12.5258	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	15463898	15464341	-140576554	+	L1ME3G	LINE	L1	441	641	-283	4
chrX	15589672	15589673	chunk0208_131_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	15589639	15589739	-140451156	-	MIRb	SINE	MIR	-20	248	139	4
chrX	15607105	15607106	chunk0208_133_1	16.12013	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	15606866	15607460	-140433435	+	LTR10C	LTR	ERV1	1	591	0	4
chrX	15640906	15640907	chunk0208_139_1	10.1791	AR_DHT_Control	chrX	15640736	15641129	-140399766	-	L2c	LINE	L2	-1	3386	2961	4
chrX	15991447	15991448	chunk0208_146_1	14.2911	AR_DHT_Control	chrX	15990809	15991848	-140049047	-	L1ME2z	LINE	L1	-169	6275	5197	4
chrX	16115673	16115674	chunk0208_150_1	49.1223	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	16115656	16115844	-139925051	+	MER58A	DNA	hAT-Charlie	4	224	0	4
chrX	16700890	16700891	chunk0208_172_1	4.83532	AR_DHT_Control	chrX	16700642	16700929	-139339966	-	MLT1I	LTR	ERVL-MaLR	-35	376	96	4
chrX	16873659	16873660	chunk0208_174_1	7.03714	AR_DHT_Control	chrX	16873593	16873695	-139167200	-	L2a	LINE	L2	-1	3425	3322	4
chrX	16967169	16967170	chunk0208_175_1	24.60051	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	16967030	16967336	-139073559	+	MER58B	DNA	hAT-Charlie	1	340	-1	4
chrX	16971727	16971728	chunk0208_176_1	11.4584	AR_DHT_Control	chrX	16970508	16971858	-139069037	-	L1MB5	LINE	L1	-2	6332	4819	4
chrX	16979644	16979645	chunk0208_179_1	24.0403	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	16979602	16979645	-139061250	+	(TATT)n	Simple_repeat	Simple_repeat	1	44	0	4
chrX	17291752	17291753	chunk0208_192_1	83.90073	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	17291628	17291761	-138749134	+	MER94	DNA	hAT-Blackjack	1	134	0	4
chrX	19097788	19097789	chunk0208_223_1	11.2084	AR_DHT_Control	chrX	19097765	19097957	-136942938	-	L2a	LINE	L2	-7	3419	3217	4
chrX	19118985	19118986	chunk0208_226_1	6.48643	AR_DHT_Control	chrX	19118709	19119201	-136921694	+	L1ME1	LINE	L1	5615	6161	-18	4
chrX	19217554	19217555	chunk0208_228_1	69.48272	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	19216691	19217795	-136823100	-	HAL1	LINE	L1	-33	2474	1230	4
chrX	19224817	19224818	chunk0208_229_1	39.4198	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	19224607	19224966	-136815929	-	L1ME3E	LINE	L1	-5132	1971	1576	4
chrX	19331178	19331179	chunk0208_230_1	12.1886	AR_DHT_Control	chrX	19331115	19331328	-136709567	-	MER20	DNA	hAT-Charlie	-4	215	3	4
chrX	19336838	19336839	chunk0208_231_1	163.4539	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	19336701	19336969	-136703926	-	LTR82B	LTR	ERVL	-21	809	515	4
chrX	19981549	19981550	chunk0208_239_1	38.33489	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	19981429	19982052	-136058843	+	L1MB7	LINE	L1	5488	6175	-9	4
chrX	20102409	20102410	chunk0208_245_1	41.9228	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	20102286	20102489	-135938406	-	L2c	LINE	L2	-262	3164	2973	4
chrX	20103743	20103744	chunk0208_246_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	20103632	20103818	-135937077	-	MER3	DNA	hAT-Charlie	-1	208	1	4
chrX	20322750	20322751	chunk0208_253_1	32.728	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	20322591	20322769	-135718126	+	MIRc	SINE	MIR	72	266	-2	4
chrX	20431783	20431784	chunk0208_255_1	16.4778	AR_DHT_Control	chrX	20431712	20431789	-135609106	+	MIR	SINE	MIR	181	257	-5	4
chrX	21454392	21454393	chunk0208_267_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	21454380	21454566	-134586329	+	L2a	LINE	L2	3198	3426	0	4
chrX	21887328	21887329	chunk0208_281_1	7.16595	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	21886962	21887337	-134153558	-	L1M5	LINE	L1	-576	5618	5259	4
chrX	22234059	22234060	chunk0208_293_1	8.27376	AR_DHT_Control	chrX	22232626	22235300	-133805595	-	L1PA7	LINE	L1	-3830	2631	11	4
chrX	22808759	22808760	chunk0208_299_1	19.8073	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	22807892	22810678	-133230217	+	L1MA8	LINE	L1	4842	7706	-4	4
chrX	23889293	23889294	chunk0208_312_1	102.9997	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	23889166	23889623	-132151272	+	L4_A_Mam	LINE	RTE-X	2698	3196	-1794	4
chrX	23920014	23920015	chunk0208_315_1	11.1716	AR_DHT_Control	chrX	23918087	23920226	-132120669	-	L1M1	LINE	L1	-3938	3627	1550	4
chrX	24091031	24091032	chunk0208_319_1	79.5006	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	24090746	24091866	-131949029	-	Tigger1	DNA	TcMar-Tigger	-1256	1162	6	4
chrX	24476804	24476805	chunk0208_323_1	5.6425	AR_DHT_Control	chrX	24476754	24476928	-131563967	+	MER58A	DNA	hAT-Charlie	46	224	0	4
chrX	24482185	24482186	chunk0208_324_1	37.5068	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	24482029	24482196	-131558699	-	MIRb	SINE	MIR	-27	241	53	4
chrX	24642735	24642736	chunk0208_327_1	31.69856	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	24642617	24642736	-131398159	+	UCON28c	Unknown	Unknown	245	366	-202	4
chrX	24661446	24661447	chunk0208_331_1	58.2493	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	24661072	24661891	-131379004	+	L1MC5	LINE	L1	8175	9042	-262	4
chrX	24662563	24662564	chunk0208_332_1	93.9757	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	24662451	24662978	-131377917	+	LTR75	LTR	ERVL	1	562	0	4
chrX	24773333	24773334	chunk0208_335_1	73.39552	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	24773122	24773420	-131267475	+	L3	LINE	CR1	2940	3248	-851	4
chrX	25169273	25169274	chunk0208_343_1	33.19939	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	25168903	25169419	-130871476	-	LTR40a	LTR	ERVL	0	519	1	4
chrX	25288900	25288901	chunk0208_348_1	53.2356	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	25288896	25289070	-130751825	+	MIRb	SINE	MIR	86	268	0	4
chrX	25395011	25395012	chunk0208_351_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	25393966	25395092	-130645803	-	L1MEc	LINE	L1	-4698	1702	518	4
chrX	25640475	25640476	chunk0208_354_1	10.1791	AR_DHT_Control	chrX	25640339	25640531	-130400364	-	LTR80B	LTR	ERVL	-233	351	145	4
chrX	25930773	25930774	chunk0208_358_1	52.9225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	25930577	25931262	-130109633	+	L1MC2	LINE	L1	5536	6233	-111	4
chrX	26166301	26166302	chunk0208_364_1	10.1791	AR_DHT_Control	chrX	26166031	26166320	-129874575	-	MLT2B4	LTR	ERVL	-265	291	1	4
chrX	26258360	26258361	chunk0208_366_1	17.19784	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	26257906	26258426	-129782469	-	MER67D	LTR	ERV1	0	514	1	4
chrX	26286690	26286691	chunk0208_367_1	23.4743	AR_DHT_Control	chrX	26281308	26287417	-129753478	-	L1PA6	LINE	L1	0	6327	174	4
chrX	26672741	26672742	chunk0208_369_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	26672465	26672892	-129368003	+	L1MA4	LINE	L1	5858	6293	-7	4
chrX	26772919	26772920	chunk0208_370_1	50.628	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	26772794	26773666	-129267229	+	L1PA17	LINE	L1	5267	6130	-36	4
chrX	27512802	27512803	chunk0208_372_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	27512694	27513424	-128527471	+	L1MA6	LINE	L1	4612	5325	-818	4
chrX	28639811	28639812	chunk0208_382_1	7.36432	AR_DHT_Control	chrX	28639566	28639921	-127400974	-	LTR16A2	LTR	ERVL	0	495	129	4
chrX	28649573	28649574	chunk0208_383_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	28649437	28649584	-127391311	+	MER103C	DNA	hAT-Charlie	84	244	-53	4
chrX	28757453	28757454	chunk0208_387_1	26.9513	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	28757437	28757550	-127283345	-	MIRc	SINE	MIR	-74	194	82	4
chrX	28887092	28887093	chunk0208_390_1	6.9834	AR_DHT_Control	chrX	28887077	28887393	-127153502	+	MLT1A1	LTR	ERVL-MaLR	1	362	-46	4
chrX	29009107	29009108	chunk0208_394_1	10.1791	AR_DHT_Control	chrX	29009002	29009370	-127031525	+	L1PA16	LINE	L1	5799	6166	0	4
chrX	29113492	29113493	chunk0208_401_1	110.0377	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	29113341	29113990	-126926905	-	L1MEd	LINE	L1	-1407	4739	3996	4
chrX	29533242	29533243	chunk0208_412_1	32.9823	AR_DHT_Control	chrX	29533088	29533804	-126507091	-	L1MB8	LINE	L1	0	6178	5444	4
chrX	29808949	29808950	chunk0208_423_1	29.48384	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	29808413	29809069	-126231826	-	L1MEd	LINE	L1	-3369	2777	2110	4
chrX	29989807	29989808	chunk0208_429_1	49.7448	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	29989618	29990695	-126050200	-	L1MA3	LINE	L1	-2252	5313	4222	4
chrX	29999903	29999904	chunk0208_430_1	27.01164	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	29999766	29999998	-126040897	-	MER58B	DNA	hAT-Charlie	-1	340	109	4
chrX	30144484	30144485	chunk0208_433_1	25.2086	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	30144418	30144802	-125896093	+	L1ME4a	LINE	L1	5673	6118	-6	4
chrX	30300138	30300139	chunk0208_434_1	78.08251	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	30299912	30300470	-125740425	+	MER68B	LTR	ERVL	1	564	0	4
chrX	30457742	30457743	chunk0208_436_1	15.3744	AR_DHT_Control	chrX	30457666	30457860	-125583035	+	MIR	SINE	MIR	53	258	-4	4
chrX	30644393	30644394	chunk0208_440_1	60.8102	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	30644321	30644679	-125396216	-	L1MC1	LINE	L1	-483	5850	5488	4
chrX	30880360	30880361	chunk0208_441_1	7.43227	AR_DHT_Control	chrX	30879148	30880575	-125160320	+	L1ME3A	LINE	L1	3479	5073	-1073	4
chrX	31316403	31316404	chunk0208_443_1	27.6777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	31316352	31316421	-124724474	-	L2a	LINE	L2	-4	3422	3351	4
chrX	32226485	32226486	chunk0208_449_1	13.2525	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	32226341	32226601	-123814294	+	L2c	LINE	L2	3125	3387	0	4
chrX	32957665	32957666	chunk0208_452_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	32957662	32957692	-123083203	+	A-rich	Low_complexity	Low_complexity	1	31	0	4
chrX	33466874	33466875	chunk0208_454_1	9.21264	AR_DHT_Control	chrX	33466802	33466976	-122573919	+	MLT1H2	LTR	ERVL-MaLR	259	405	-190	4
chrX	34382632	34382633	chunk0208_456_1	37.1741	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	34382443	34382670	-121658225	+	MER103C	DNA	hAT-Charlie	69	297	0	4
chrX	34467581	34467582	chunk0208_458_1	100.3503	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	34467484	34468184	-121572711	+	L1MC3	LINE	L1	6564	7287	-498	4
chrX	34491321	34491322	chunk0208_460_1	7.36432	AR_DHT_Control	chrX	34490644	34491815	-121549080	-	L1PA15	LINE	L1	0	6165	4976	4
chrX	34932459	34932460	chunk0209_5_1	10.1791	AR_DHT_Control	chrX	34931332	34932528	-121108367	+	L1PA13	LINE	L1	1	1173	-5612	4
chrX	35056671	35056672	chunk0209_9_1	18.27473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	35054244	35056677	-120984218	-	Tigger1	DNA	TcMar-Tigger	-4	2414	1	4
chrX	35220129	35220130	chunk0209_12_1	10.1791	AR_DHT_Control	chrX	35220017	35220537	-120820358	+	MLT2B4	LTR	ERVL	1	552	-4	4
chrX	35280413	35280414	chunk0209_13_1	84.3388	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	35279919	35280940	-120759955	-	L1MB5	LINE	L1	-9	6663	5606	4
chrX	35380163	35380164	chunk0209_16_1	16.36155	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	35378871	35381570	-120659325	-	L1PA15-16	LINE	L1	-3113	4201	1624	4
chrX	35530481	35530482	chunk0209_20_1	10.1791	AR_DHT_Control	chrX	35529793	35530939	-120509956	-	L1M2	LINE	L1	-1904	4239	2865	4
chrX	35561126	35561127	chunk0209_21_1	11.1716	AR_DHT_Control	chrX	35560206	35561778	-120479117	+	L1P4e	LINE	L1	529	2066	-4719	4
chrX	35665029	35665030	chunk0209_23_1	18.7412	AR_DHT_Control	chrX	35664744	35665153	-120375742	-	MER92A	LTR	ERV1	0	412	1	4
chrX	35777615	35777616	chunk0209_26_1	85.3872	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	35777511	35777953	-120262942	+	MER51E	LTR	ERV1	1	480	-2	4
chrX	36040637	36040638	chunk0209_30_1	15.54852	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	36040120	36040760	-120000135	+	L1M5	LINE	L1	2272	2970	-3176	4
chrX	36072367	36072368	chunk0209_32_1	21.27378	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	36072268	36072395	-119968500	-	MER119	DNA	hAT-Charlie	-450	133	1	4
chrX	36076821	36076822	chunk0209_33_1	10.802	AR_DHT_Control	chrX	36076363	36077183	-119963712	-	L1MA8	LINE	L1	-760	5531	4708	4
chrX	36260155	36260156	chunk0209_37_1	7.36432	AR_DHT_Control	chrX	36259699	36261123	-119779772	-	L1PA16	LINE	L1	0	6166	4735	4
chrX	36583013	36583014	chunk0209_43_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	36583006	36583275	-119457620	-	L5	LINE	RTE-X	-1772	493	220	4
chrX	36621969	36621970	chunk0209_44_1	44.1348	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	36620747	36622621	-119418274	-	L1ME2	LINE	L1	-7	6157	4080	4
chrX	36843884	36843885	chunk0209_48_1	50.218	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	36843522	36843971	-119196924	-	L1ME3	LINE	L1	-148	6014	5537	4
chrX	36920584	36920585	chunk0209_55_1	29.1775	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	36919029	36923936	-119116959	-	L1MA3	LINE	L1	-1817	5748	701	4
chrX	36921645	36921646	chunk0209_56_1	7.53305	AR_DHT_Control	chrX	36919029	36923936	-119116959	-	L1MA3	LINE	L1	-1817	5748	701	4
chrX	37368123	37368124	chunk0209_60_1	21.52394	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	37368016	37369374	-118671521	-	L1MCb	LINE	L1	-3329	3235	1834	4
chrX	37697533	37697534	chunk0209_67_1	19.24119	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	37697488	37697615	-118343280	+	MamRep605	LTR?	LTR?	393	524	-325	4
chrX	38062673	38062674	chunk0209_75_1	9.21264	AR_DHT_Control	chrX	38062562	38063166	-117977729	+	MER90a	LTR	ERV1	1	599	-15	4
chrX	38111335	38111336	chunk0209_77_1	35.0489	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	38111189	38111426	-117929469	+	MIR	SINE	MIR	10	261	-1	4
chrX	38602576	38602577	chunk0209_82_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	38602465	38602613	-117438282	+	L1M	LINE	L1	5286	5425	-699	4
chrX	38998671	38998672	chunk0209_85_1	6.48643	AR_DHT_Control	chrX	38998007	38998743	-117042152	+	L1ME4b	LINE	L1	32	724	-168	4
chrX	39266265	39266266	chunk0209_91_1	17.0863	AR_DHT_Control	chrX	39266237	39266450	-116774445	-	MIR	SINE	MIR	-3	259	12	4
chrX	39598861	39598862	chunk0209_94_1	112.81462	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	39598746	39598865	-116442030	-	LTR33	LTR	ERVL	-399	116	1	4
chrX	40518296	40518297	chunk0209_115_1	81.8055	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	40518180	40518609	-115522286	+	LTR47B2	LTR	ERVL	1	431	-3	4
chrX	40526431	40526432	chunk0209_118_1	37.0429	AR_DHT_Control	chrX	40526221	40526951	-115513944	-	ERV3-16A3_I-int	LTR	ERVL	-1663	3563	2818	4
chrX	40738835	40738836	chunk0209_120_1	25.1749	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	40738815	40739224	-115301671	+	LOR1b	LTR	ERV1	1	461	0	4
chrX	40784976	40784977	chunk0209_122_1	14.2141	AR_DHT_Control	chrX	40784967	40785031	-115255864	+	LTR67B	LTR	ERVL	550	612	-8	4
chrX	40799830	40799831	chunk0209_123_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	40798446	40800896	-115239999	+	L1PB1	LINE	L1	4414	6867	0	4
chrX	40840688	40840689	chunk0209_124_1	19.8997	AR_DHT_Control	chrX	40839813	40840743	-115200152	-	L1MEc	LINE	L1	-5389	1011	51	4
chrX	40887677	40887678	chunk0209_126_1	62.84	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	40886820	40887979	-115152916	-	L1PA16	LINE	L1	0	6166	4991	4
chrX	40943549	40943550	chunk0209_127_1	13.2288	AR_DHT_Control	chrX	40943527	40943933	-115096962	+	LTR40b	LTR	ERVL	62	460	-2	4
chrX	41488535	41488536	chunk0209_133_1	39.4971	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	41488458	41488818	-114552077	+	L1MD	LINE	L1	4492	4830	-1316	4
chrX	41572999	41573000	chunk0209_136_1	17.32118	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	41572248	41573064	-114467831	-	L1ME1	LINE	L1	-3872	2447	1516	4
chrX	41614393	41614394	chunk0209_137_1	31.1709	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	41614384	41614511	-114426384	-	L1MD1	LINE	L1	-318	5924	5748	4
chrX	41994113	41994114	chunk0209_144_1	12.1886	AR_DHT_Control	chrX	41993808	41994820	-114046075	+	L1MB8	LINE	L1	3012	4041	-2965	4
chrX	42378972	42378973	chunk0209_149_1	72.6299	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	42378874	42379001	-113661894	+	L2c	LINE	L2	3271	3387	0	4
chrX	42708084	42708085	chunk0209_154_1	20.8375	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	42707020	42708108	-113332787	-	L1MD3	LINE	L1	-14	7981	6801	4
chrX	42926109	42926110	chunk0209_160_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	42920470	42928181	-113112714	+	L1MA3	LINE	L1	13	7718	-6	4
chrX	43143921	43143922	chunk0209_161_1	21.3095	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	43143818	43144020	-112896875	-	MER58A	DNA	hAT-Charlie	0	224	1	4
chrX	43264931	43264932	chunk0209_163_1	18.28914	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	43262022	43265492	-112775403	-	L1MA2	LINE	L1	-1508	6057	2541	4
chrX	43615822	43615823	chunk0209_169_1	53.2156	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	43615476	43616057	-112424838	-	L2	LINE	L2	-943	2476	1815	4
chrX	43688768	43688769	chunk0209_177_1	7.36432	AR_DHT_Control	chrX	43688519	43688998	-112351897	-	L1MEd	LINE	L1	-3309	2837	2287	4
chrX	43742431	43742432	chunk0209_186_1	14.0237	AR_DHT_Control	chrX	43742304	43742880	-112298015	+	LTR87	LTR	ERVL?	1	617	-7	4
chrX	43806136	43806137	chunk0209_189_1	37.3427	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	43806007	43807083	-112233812	-	L1MC3	LINE	L1	0	7785	6698	4
chrX	43861009	43861010	chunk0209_191_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	43859413	43861222	-112179673	+	L2a	LINE	L2	1394	3415	-11	4
chrX	43865377	43865378	chunk0209_192_1	8.58634	AR_DHT_Control	chrX	43864994	43865594	-112175301	+	L1MB7	LINE	L1	5588	6183	-1	4
chrX	43918526	43918527	chunk0209_196_1	31.64514	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	43918197	43918566	-112122329	+	L1ME4a	LINE	L1	5336	5704	-420	4
chrX	44348182	44348183	chunk0209_208_1	8.27376	AR_DHT_Control	chrX	44348026	44348245	-111692650	-	L1MC4	LINE	L1	-491	7551	7337	4
chrX	44545825	44545826	chunk0209_209_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	44545359	44545948	-111494947	-	LTR10C	LTR	ERV1	0	591	1	4
chrX	44571089	44571090	chunk0209_210_1	127.0233	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	44570791	44571530	-111469365	-	Charlie25	DNA	hAT-Charlie	-1528	996	230	4
chrX	44686532	44686533	chunk0209_212_1	55.4018	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	44686465	44686607	-111354288	+	L2a	LINE	L2	3256	3413	-13	4
chrX	44891945	44891946	chunk0209_221_1	64.1756	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	44891548	44892133	-111148762	-	LTR10C	LTR	ERV1	0	591	9	4
chrX	44943258	44943259	chunk0209_224_1	36.25617	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	44943147	44943360	-111097535	-	Tigger1a_Art	DNA	TcMar-Tigger	-2	495	288	4
chrX	45052848	45052849	chunk0209_227_1	8.27376	AR_DHT_Control	chrX	45052695	45052994	-110987901	-	AluJr	SINE	Alu	-11	301	1	4
chrX	45202505	45202506	chunk0209_230_1	5.83706	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	45202254	45202583	-110838312	-	MER57E1	LTR	ERV1	0	372	3	4
chrX	45203208	45203209	chunk0209_231_1	13.5952	AR_DHT_Control	chrX	45202935	45203342	-110837553	-	MER34B-int	LTR	ERV1	-935	3936	3648	4
chrX	45296238	45296239	chunk0209_235_1	117.88151	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	45296011	45296827	-110744068	-	L1ME4a	LINE	L1	-30	6094	5257	4
chrX	45301812	45301813	chunk0209_236_1	4.83532	AR_DHT_Control	chrX	45301182	45302122	-110738773	+	MER4-int	LTR	ERV1	76	1075	-5523	4
chrX	45302745	45302746	chunk0209_237_1	7.87682	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	45302606	45305539	-110735356	+	MER4-int	LTR	ERV1	1463	5347	-1251	4
chrX	45328517	45328518	chunk0209_239_1	12.26965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	45328158	45329067	-110711828	-	L1MD2	LINE	L1	-14	6345	5442	4
chrX	45331105	45331106	chunk0209_240_1	8.73763	AR_DHT_Control	chrX	45330751	45331498	-110709397	+	BLACKJACK	DNA	hAT-Blackjack	192	971	-1998	4
chrX	45634328	45634329	chunk0209_244_1	15.40406	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	45634156	45634333	-110406562	-	L1M5	LINE	L1	-1311	4835	4625	4
chrX	45761766	45761767	chunk0209_249_1	6.20921	AR_DHT_Control	chrX	45761723	45761807	-110279088	-	HY3	scRNA	scRNA	-6	95	11	4
chrX	46094227	46094228	chunk0209_253_1	6.48643	AR_DHT_Control	chrX	46093727	46094260	-109946635	+	L1ME1	LINE	L1	5606	6150	-29	4
chrX	46103243	46103244	chunk0209_254_1	13.2288	AR_DHT_Control	chrX	46101374	46103860	-109937035	-	L1PA10	LINE	L1	-702	5651	3080	4
chrX	46290604	46290605	chunk0209_256_1	28.22418	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	46289455	46291059	-109749836	-	L1MA8	LINE	L1	-947	5196	3614	4
chrX	46306243	46306244	chunk0209_258_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	46306201	46306318	-109734577	-	LOR1b	LTR	ERV1	-340	121	3	4
chrX	46372023	46372024	chunk0209_259_1	18.27473	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	46371536	46372051	-109668844	-	Tigger3b	DNA	TcMar-Tigger	-472	759	236	4
chrX	46567096	46567097	chunk0209_260_1	40.6868	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	46567007	46567320	-109473575	-	Tigger3a	DNA	TcMar-Tigger	0	348	1	4
chrX	46667207	46667208	chunk0209_264_1	9.21264	AR_DHT_Control	chrX	46667111	46667313	-109373582	-	MIRb	SINE	MIR	-50	218	5	4
chrX	46731044	46731045	chunk0209_267_1	8.40061	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	46730730	46731258	-109309637	+	L1ME4b	LINE	L1	4384	4941	-1205	4
chrX	46812730	46812731	chunk0209_269_1	70.2877	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	46811913	46812835	-109228060	+	L2a	LINE	L2	2232	3240	-186	4
chrX	47619930	47619931	chunk0209_286_1	9.44294	SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	47619917	47619966	-108420929	+	(CGCGG)n	Simple_repeat	Simple_repeat	1	51	0	4
chrX	48083540	48083541	chunk0209_288_1	7.36432	AR_DHT_Control	chrX	48081888	48084820	-107956075	+	ERVL47-int	LTR	ERVL	39	3011	-2235	4
chrX	48165420	48165421	chunk0209_289_1	12.1886	AR_DHT_Control	chrX	48165148	48165449	-107875446	-	AluSg	SINE	Alu	-5	305	3	4
chrX	48288093	48288094	chunk0209_290_1	86.90767	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	48288052	48288112	-107752783	-	MER4B	LTR	ERV1	-336	274	215	4
chrX	48346391	48346392	chunk0209_291_1	7.36432	AR_DHT_Control	chrX	48346309	48346407	-107694488	+	L1M5	LINE	L1	5598	5700	-424	4
chrX	48589961	48589962	chunk0209_292_1	18.3379	AR_DHT_Control	chrX	48589881	48590353	-107450542	+	LTR75	LTR	ERVL	6	533	-29	4
chrX	48626926	48626927	chunk0209_298_1	12.1886	AR_DHT_Control	chrX	48626777	48626937	-107413958	-	FRAM	SINE	Alu	-17	159	1	4
chrX	49003919	49003920	chunk0209_305_1	66.70047	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	49003689	49004063	-107036832	-	L1ME2	LINE	L1	-4	6330	5799	4
chrX	49610877	49610878	chunk0209_307_1	10.1791	AR_DHT_Control	chrX	49610519	49610986	-106429909	-	MER77	LTR	ERVL	-9	595	116	4
chrX	49699991	49699992	chunk0209_308_1	10.1791	AR_DHT_Control	chrX	49699564	49700301	-106340594	-	L1MB7	LINE	L1	-54	6130	5323	4
chrX	49825256	49825257	chunk0209_309_1	80.7379	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	49823945	49825288	-106215607	+	L1MEf	LINE	L1	3561	5042	-1277	4
chrX	49901364	49901365	chunk0209_312_1	7.36432	AR_DHT_Control	chrX	49900942	49901619	-106139276	-	MER67C	LTR	ERV1	0	711	21	4
chrX	50318796	50318797	chunk0209_318_1	116.6296	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	50318649	50319216	-105721679	+	MER68	LTR	ERVL	1	563	0	4
chrX	50363903	50363904	chunk0209_320_1	31.1592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	50360984	50364142	-105676753	+	L1PB4	LINE	L1	32	3298	-3246	4
chrX	50479682	50479683	chunk0209_324_1	10.1791	AR_DHT_Control	chrX	50479309	50479742	-105561153	-	HAL1	LINE	L1	-941	1566	1105	4
chrX	50534187	50534188	chunk0209_325_1	43.5146	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	50533993	50534337	-105506558	-	L2c	LINE	L2	-1409	2010	1650	4
chrX	51316515	51316516	chunk0209_330_1	252.243	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	51316380	51316687	-104724208	+	L1MC4	LINE	L1	6774	7087	-955	4
chrX	51523496	51523497	chunk0209_340_1	217.8338	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	51523347	51523654	-104517241	-	L1MC4	LINE	L1	-955	7087	6774	4
chrX	51727855	51727856	chunk0209_342_1	22.3715	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	51727781	51728034	-104312861	-	L1MCb	LINE	L1	-4038	2622	2389	4
chrX	53010949	53010950	chunk0209_347_1	17.68633	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	53010523	53011163	-103029732	+	L1MEc	LINE	L1	1850	2461	-3939	4
chrX	53045129	53045130	chunk0209_348_1	12.1886	AR_DHT_Control	chrX	53044803	53045195	-102995700	+	MER41G	LTR	ERV1	1	770	-115	4
chrX	53230376	53230377	chunk0209_355_1	7.46309	AR_DHT_Control	chrX	53230340	53230543	-102810352	-	MER3	DNA	hAT-Charlie	0	209	2	4
chrX	53325039	53325040	chunk0209_357_1	5.55081	AR_DHT_Control	chrX	53324863	53325052	-102715843	-	MIR	SINE	MIR	-2	260	77	4
chrX	53522718	53522719	chunk0209_358_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	53522549	53523366	-102517529	+	Tigger2	DNA	TcMar-Tigger	277	1051	-1667	4
chrX	53639821	53639822	chunk0209_362_1	49.376	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	53639799	53639930	-102400965	-	MIRb	SINE	MIR	-13	255	123	4
chrX	53658860	53658861	chunk0209_364_1	5.6425	AR_DHT_Control	chrX	53658062	53659874	-102381021	+	L1MC1	LINE	L1	4325	6333	0	4
chrX	53914253	53914254	chunk0209_366_1	12.1886	AR_DHT_Control	chrX	53913686	53914273	-102126622	-	L1MD2	LINE	L1	-2163	4374	3771	4
chrX	54029672	54029673	chunk0209_369_1	21.4466	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54029457	54029731	-102011164	-	MER45C	DNA	hAT-Tip100	-13	940	623	4
chrX	54093439	54093440	chunk0209_378_1	23.3425	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54093274	54093452	-101947443	-	L2c	LINE	L2	-82	3305	3128	4
chrX	54348011	54348012	chunk0209_379_1	22.2669	AR_DHT_Control	chrX	54347773	54348088	-101692807	-	L1ME4b	LINE	L1	-16	876	535	4
chrX	54420153	54420154	chunk0209_381_1	53.39061	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54419785	54420206	-101620689	-	L2c	LINE	L2	0	3387	2918	4
chrX	54648889	54648890	chunk0209_384_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54648839	54648970	-101391925	-	L1ME1	LINE	L1	-2	6177	6046	4
chrX	54779331	54779332	chunk0209_386_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54778494	54780911	-101259984	+	L1MA2	LINE	L1	2357	4811	-2754	4
chrX	54795401	54795402	chunk0209_387_1	20.67265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54795209	54795471	-101245424	+	Charlie7a	DNA	hAT-Charlie	7	271	-1	4
chrX	54990612	54990613	chunk0209_392_1	93.1893	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	54990061	54991539	-101049356	+	L1ME3A	LINE	L1	3025	4624	-1522	4
chrX	55022664	55022665	chunk0209_394_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	55022304	55023039	-101017856	+	L1ME3G	LINE	L1	1	778	-146	4
chrX	55106647	55106648	chunk0209_395_1	6.48643	AR_DHT_Control	chrX	55106613	55106769	-100934126	+	L1MA4	LINE	L1	5883	6047	-1518	4
chrX	55149373	55149374	chunk0209_397_1	8.27376	AR_DHT_Control	chrX	55148082	55150235	-100890660	+	MER4-int	LTR	ERV1	1687	4928	-1670	4
chrX	55774942	55774943	chunk0209_402_1	4.83532	AR_DHT_Control	chrX	55768921	55775044	-100265851	-	L1PA6	LINE	L1	0	6154	10	4
chrX	55796773	55796774	chunk0209_403_1	53.4183	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	55796353	55797535	-100243360	-	Tigger3	DNA	TcMar-Tigger	0	3029	1780	4
chrX	56001011	56001012	chunk0209_406_1	153.6879	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	56000871	56001019	-100039876	-	MLT1N2	LTR	ERVL-MaLR	0	562	409	4
chrX	56020969	56020970	chunk0209_408_1	13.2288	AR_DHT_Control	chrX	56020847	56020972	-100019923	+	L2c	LINE	L2	2972	3088	-299	4
chrX	56308871	56308872	chunk0209_410_1	23.70084	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	56308002	56310795	-99730100	-	L1PA15	LINE	L1	-3230	4911	2054	4
chrX	56750839	56750840	chunk0209_411_1	7.09019	AR_DHT_Control	chrX	56750295	56750979	-99289916	+	L2	LINE	L2	2124	2858	-561	4
chrX	56817429	56817430	chunk0209_415_1	102.3374	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	56817153	56817511	-99223384	+	MamRep605	LTR?	LTR?	450	813	-36	4
chrX	56920463	56920464	chunk0209_416_1	105.498	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	56915290	56921294	-99119601	-	L1PA6	LINE	L1	-27	6127	4	4
chrX	56946259	56946260	chunk0209_417_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	56942421	56948173	-99092722	+	HERVK11-int	LTR	ERVK	970	6765	-1188	4
chrX	57046318	57046319	chunk0209_418_1	12.1886	AR_DHT_Control	chrX	57046250	57048915	-98991980	+	L1PA7	LINE	L1	2792	5475	-697	4
chrX	57074635	57074636	chunk0209_419_1	98.801	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	57074598	57074774	-98966121	-	L1MD3	LINE	L1	-915	7080	6908	4
chrX	57108435	57108436	chunk0209_421_1	28.5401	AR_DHT_Control	chrX	57106402	57108950	-98931945	+	HERVK3-int	LTR	ERVK	4616	7202	0	4
chrX	57335930	57335931	chunk0209_422_1	8.27376	AR_DHT_Control	chrX	57335163	57336040	-98704855	-	LTR5_Hs	LTR	ERVK	0	968	89	4
chrX	57354965	57354966	chunk0209_423_1	44.0165	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	57354915	57355057	-98685838	+	L1ME4a	LINE	L1	5956	6122	-2	4
chrX	57551614	57551615	chunk0209_424_1	68.5669	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	57551256	57552377	-98488518	+	L1PBa	LINE	L1	5281	6388	-479	4
chrX	57643781	57643782	chunk0209_427_1	18.28914	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	57642704	57644954	-98395941	+	L1MA2	LINE	L1	2862	5052	-2513	4
chrX	59487610	59487611	chunk0209_429_1	14.6381	Merged_Lncap_AR_Veh	chrX	59487536	59487694	-96553201	-	BSR/Beta	Satellite	Satellite	-9	158	1	4
chrX	62707929	62707930	chunk0209_430_1	13.2288	AR_DHT_Control	chrX	62707616	62708459	-93332436	-	MER11D	LTR	ERVK	-21	876	1	4
chrX	62740255	62740256	chunk0209_431_1	8.27376	AR_DHT_Control	chrX	62740078	62740554	-93300341	+	HERVK-int	LTR	ERVK	4986	5462	-2074	4
chrX	63123894	63123895	chunk0209_432_1	14.2911	AR_DHT_Control	chrX	63121343	63124606	-92916289	+	L1M2	LINE	L1	782	4136	-3426	4
chrX	63124490	63124491	chunk0209_433_1	15.3744	AR_DHT_Control	chrX	63121343	63124606	-92916289	+	L1M2	LINE	L1	782	4136	-3426	4
chrX	63282319	63282320	chunk0209_435_1	27.74	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	63282297	63282759	-92758136	+	MER83	LTR	ERV1	1	440	-8	4
chrX	63360470	63360471	chunk0209_437_1	12.1886	AR_DHT_Control	chrX	63358485	63362967	-92677928	-	HERVK22-int	LTR	ERVK	0	6837	2327	4
chrX	64458500	64458501	chunk0209_443_1	28.9308	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	64457591	64465678	-91575217	-	L1PA13	LINE	L1	-3	8155	1	4
chrX	65891900	65891901	chunk0209_450_1	22.79025	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	65891387	65894816	-90146079	-	L1PA6	LINE	L1	-2749	3570	178	4
chrX	65907356	65907357	chunk0209_451_1	22.5952	AR_DHT_Control	chrX	65907068	65907601	-90133294	+	L1ME4c	LINE	L1	230	787	-43	4
chrX	66003716	66003717	chunk0209_452_1	6.48643	AR_DHT_Control	chrX	66003678	66004076	-90036819	-	L2b	LINE	L2	-8	3379	2939	4
chrX	66196301	66196302	chunk0209_454_1	14.3743	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	66196221	66196407	-89844488	+	L1ME2z	LINE	L1	6232	6419	-25	4
chrX	66712718	66712719	chunk0209_457_1	11.1716	AR_DHT_Control	chrX	66712678	66713037	-89327858	-	L2c	LINE	L2	-26	3361	2997	4
chrX	66733683	66733684	chunk0210_2_1	36.0173	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	66733574	66733704	-89307191	+	L1MA1	LINE	L1	6172	6302	0	4
chrX	66745293	66745294	chunk0210_3_1	87.1336	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	66744378	66746051	-89294844	-	L1PB1	LINE	L1	-3	6864	5264	4
chrX	66798224	66798225	chunk0210_5_1	17.6003	AR_DHT_Control	chrX	66798192	66798387	-89242508	-	MIRc	SINE	MIR	-7	261	63	4
chrX	66848009	66848010	chunk0210_6_1	41.22334	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	66846980	66848444	-89192451	+	L1MA1	LINE	L1	4800	6302	0	4
chrX	66863596	66863597	chunk0210_8_1	7.36432	AR_DHT_Control	chrX	66863501	66863710	-89177185	+	L2	LINE	L2	2074	2286	-1133	4
chrX	66869029	66869030	chunk0210_9_1	60.8726	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	66868899	66869227	-89171668	-	L2c	LINE	L2	-1	3386	3017	4
chrX	66899894	66899895	chunk0210_11_1	3.68809	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	66899769	66900016	-89140879	+	MIRb	SINE	MIR	18	267	-1	4
chrX	67308552	67308553	chunk0210_23_1	7.36432	AR_DHT_Control	chrX	67308496	67308865	-88732030	-	L1PB1	LINE	L1	0	6867	6510	4
chrX	67416217	67416218	chunk0210_25_1	6.48643	AR_DHT_Control	chrX	67416163	67416330	-88624565	+	L1PB3	LINE	L1	4192	4359	-1787	4
chrX	67633336	67633337	chunk0210_29_1	26.9513	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	67633131	67633506	-88407389	-	L1PA15	LINE	L1	-5	6160	5779	4
chrX	67774382	67774383	chunk0210_36_1	7.36432	AR_DHT_Control	chrX	67772044	67775358	-88265537	+	L1PREC2	LINE	L1	3961	7301	-840	4
chrX	68247273	68247274	chunk0210_39_1	70.2894	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	68247059	68247308	-87793587	+	L2c	LINE	L2	3040	3276	-111	4
chrX	68428593	68428594	chunk0210_47_1	4.83532	AR_DHT_Control	chrX	68428342	68428628	-87612267	+	L2b	LINE	L2	3120	3383	-4	4
chrX	68933168	68933169	chunk0210_53_1	8.8907	AR_DHT_Control	chrX	68933023	68933233	-87107662	+	MIR	SINE	MIR	5	212	-50	4
chrX	68959941	68959942	chunk0210_54_1	21.024	AR_DHT_Control	chrX	68959444	68960655	-87080240	-	L1MD2	LINE	L1	-54	6305	5046	4
chrX	69273591	69273592	chunk0210_57_1	4.06817	AR_DHT_Control	chrX	69273572	69273605	-86767290	+	(AC)n	Simple_repeat	Simple_repeat	1	33	0	4
chrX	69314702	69314703	chunk0210_59_1	75.1586	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	69314431	69314779	-86726116	+	L2b	LINE	L2	3029	3369	-6	4
chrX	69425200	69425201	chunk0210_61_1	7.36432	AR_DHT_Control	chrX	69425157	69425353	-86615542	+	Charlie17a	DNA	hAT-Charlie	1	217	0	4
chrX	69947355	69947356	chunk0210_67_1	7.97158	AR_DHT_Control	chrX	69947191	69947796	-86093099	-	MamRTE1	LINE	RTE-BovB	-1	3811	3170	4
chrX	69971792	69971793	chunk0210_72_1	11.1716	AR_DHT_Control	chrX	69971504	69971849	-86069046	+	L2b	LINE	L2	3018	3374	-1	4
chrX	70138759	70138760	chunk0210_73_1	27.6777	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	70138502	70138975	-85901920	-	L1ME4a	LINE	L1	-174	5950	5591	4
chrX	70157069	70157070	chunk0210_76_1	47.7573	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	70156958	70157104	-85883791	+	L1MA8	LINE	L1	6096	6290	-1	4
chrX	70172469	70172470	chunk0210_77_1	14.7725	AR_DHT_Control	chrX	70172390	70172500	-85868395	+	L1ME4b	LINE	L1	772	882	-10	4
chrX	70923129	70923130	chunk0210_85_1	13.2288	AR_DHT_Control	chrX	70923050	70923490	-85117405	-	L1ME4b	LINE	L1	-510	382	2	4
chrX	70968765	70968766	chunk0210_86_1	53.2159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	70968542	70969201	-85071694	+	L1ME2	LINE	L1	5476	6159	-5	4
chrX	71093606	71093607	chunk0210_89_1	12.1886	AR_DHT_Control	chrX	71093476	71093798	-84947097	-	L2c	LINE	L2	-90	3297	2934	4
chrX	71184570	71184571	chunk0210_91_1	7.36432	AR_DHT_Control	chrX	71184492	71184746	-84856149	-	MIR	SINE	MIR	0	262	4	4
chrX	71185278	71185279	chunk0210_92_1	4.98725	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	71185235	71185445	-84855450	-	L2c	LINE	L2	0	3387	3147	4
chrX	71552270	71552271	chunk0210_99_1	36.36159	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	71552238	71552387	-84488508	+	L1MC5	LINE	L1	8834	8993	-311	4
chrX	71587117	71587118	chunk0210_101_1	9.21264	AR_DHT_Control	chrX	71587029	71587386	-84453509	-	L2c	LINE	L2	-1656	1763	1400	4
chrX	71643136	71643137	chunk0210_103_1	11.1716	AR_DHT_Control	chrX	71642997	71643587	-84397308	-	L1PB3	LINE	L1	-7	6147	5507	4
chrX	72046405	72046406	chunk0210_105_1	50.15339	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	72046385	72046506	-83994389	+	MIR	SINE	MIR	114	236	-32	4
chrX	72053439	72053440	chunk0210_107_1	10.1791	AR_DHT_Control	chrX	72053423	72053572	-83987323	+	MER113A	DNA	hAT-Charlie	44	185	-129	4
chrX	72217143	72217144	chunk0210_108_1	56.932	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	72216798	72217500	-83823395	-	L4_C_Mam	LINE	RTE-X	-995	4143	3206	4
chrX	72227758	72227759	chunk0210_111_1	7.36432	AR_DHT_Control	chrX	72227745	72228334	-83812561	+	LTR10C	LTR	ERV1	1	591	0	4
chrX	72478155	72478156	chunk0210_118_1	29.59229	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	72478091	72478384	-83562511	+	MamRep434	DNA	TcMar-Tigger	95	421	-5	4
chrX	72994887	72994888	chunk0210_122_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	72993357	72995967	-83044928	+	L1MA1	LINE	L1	3675	6302	0	4
chrX	73160040	73160041	chunk0210_123_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	73159681	73161884	-82879011	-	L1M1	LINE	L1	-4169	3396	1103	4
chrX	73968401	73968402	chunk0210_125_1	25.9343	AR_DHT_Control	chrX	73968165	73968503	-82072392	-	L1MD3	LINE	L1	-978	7699	7328	4
chrX	73981236	73981237	chunk0210_126_1	8.27376	AR_DHT_Control	chrX	73980924	73981919	-82058976	-	L1MB8	LINE	L1	0	6178	5124	4
chrX	74181520	74181521	chunk0210_128_1	63.6656	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	74181043	74182015	-81858880	+	HERVK3-int	LTR	ERVK	6225	7200	-2	4
chrX	74251848	74251849	chunk0210_131_1	22.10215	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	74251816	74251889	-81789006	+	MER21C	LTR	ERVL	754	842	-96	4
chrX	74253040	74253041	chunk0210_134_1	31.83763	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	74252945	74253362	-81787533	+	MER68B	LTR	ERVL	29	511	-53	4
chrX	74646822	74646823	chunk0210_139_1	10.1791	AR_DHT_Control	chrX	74645462	74647382	-81393513	-	L1MA1	LINE	L1	0	7721	5794	4
chrX	74696447	74696448	chunk0210_142_1	9.21264	AR_DHT_Control	chrX	74695718	74701870	-81339025	+	L1PA6	LINE	L1	4	6154	0	4
chrX	75093033	75093034	chunk0210_144_1	43.5686	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	75088141	75093766	-80947129	+	L1MC2	LINE	L1	799	6752	-10	4
chrX	75351914	75351915	chunk0210_145_1	15.3744	AR_DHT_Control	chrX	75351839	75352294	-80688601	-	L1PA7	LINE	L1	-4749	2036	1589	4
chrX	75628027	75628028	chunk0210_148_1	104.0793	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	75626074	75629246	-80411649	-	L1PB1	LINE	L1	-2	6865	3677	4
chrX	76439086	76439087	chunk0210_150_1	19.70205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	76439054	76442614	-79598281	-	L1MA4A	LINE	L1	-1631	5931	2352	4
chrX	77573186	77573187	chunk0210_154_1	6.48643	AR_DHT_Control	chrX	77573111	77573422	-78467473	+	Tigger3a	DNA	TcMar-Tigger	2	347	-1	4
chrX	77642797	77642798	chunk0210_155_1	39.2462	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	77642679	77642851	-78398044	+	L1M4c	LINE	L1	1	166	-6441	4
chrX	77650014	77650015	chunk0210_157_1	30.41294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	77649889	77650208	-78390687	+	L1M5	LINE	L1	4393	4716	-1430	4
chrX	77949969	77949970	chunk0210_163_1	79.6748	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	77949840	77950043	-78090852	-	MLT1N2	LTR	ERVL-MaLR	0	562	374	4
chrX	78333661	78333662	chunk0210_173_1	10.1791	AR_DHT_Control	chrX	78333468	78333701	-77707194	+	MIRc	SINE	MIR	17	248	-20	4
chrX	78842764	78842765	chunk0210_175_1	9.21264	AR_DHT_Control	chrX	78841267	78843119	-77197776	+	L1PREC2	LINE	L1	4270	6160	0	4
chrX	79230453	79230454	chunk0210_178_1	42.127	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	79225838	79233079	-76807816	-	L1MA2	LINE	L1	0	7723	452	4
chrX	79331459	79331460	chunk0210_181_1	14.41592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	79331236	79331860	-76709035	-	MER51D	LTR	ERV1	0	657	1	4
chrX	79484817	79484818	chunk0210_182_1	10.1791	AR_DHT_Control	chrX	79481704	79487391	-76553504	+	L1P2	LINE	L1	1681	7276	-865	4
chrX	79632252	79632253	chunk0210_183_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	79632146	79632279	-76408616	-	AluJb	SINE	Alu	-9	303	170	4
chrX	79694455	79694456	chunk0210_184_1	37.694	AR_DHT_Control	chrX	79694206	79697748	-76343147	-	L1PA7	LINE	L1	-2926	3535	1	4
chrX	79803647	79803648	chunk0210_188_1	19.96498	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	79803196	79806453	-76234442	-	L1MA1	LINE	L1	-3695	3870	13	4
chrX	80060076	80060077	chunk0210_191_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	80059791	80060538	-75980357	-	L1P4	LINE	L1	-674	5492	4747	4
chrX	80274638	80274639	chunk0210_194_1	11.1716	AR_DHT_Control	chrX	80273426	80279879	-75761016	+	L1PA7	LINE	L1	1	6462	-7	4
chrX	80309227	80309228	chunk0210_196_1	20.79346	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	80309147	80309651	-75731244	+	MER68	LTR	ERVL	5	525	-38	4
chrX	80320080	80320081	chunk0210_197_1	10.1791	AR_DHT_Control	chrX	80319278	80321315	-75719580	+	L1PA6	LINE	L1	180	2168	-4189	4
chrX	80495195	80495196	chunk0210_198_1	20.2804	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	80495193	80495280	-75545615	+	L1PB4	LINE	L1	6068	6154	-2	4
chrX	80613851	80613852	chunk0210_201_1	25.27786	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	80612134	80613867	-75427028	+	L1PA15	LINE	L1	5570	7342	-799	4
chrX	80632647	80632648	chunk0210_202_1	44.8253	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	80630688	80636286	-75404609	-	L1MA3	LINE	L1	-1	7723	1965	4
chrX	80645867	80645868	chunk0210_203_1	16.81213	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	80645769	80646048	-75394847	-	L1MEd	LINE	L1	-6250	1713	1437	4
chrX	80697701	80697702	chunk0210_205_1	25.9343	AR_DHT_Control	chrX	80697314	80698203	-75342692	-	L1PA17	LINE	L1	0	6166	5257	4
chrX	81221100	81221101	chunk0210_211_1	60.6696	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	81219261	81221317	-74819578	-	L1M1	LINE	L1	-1632	4514	2446	4
chrX	81302022	81302023	chunk0210_215_1	9.21264	AR_DHT_Control	chrX	81301868	81302672	-74738223	-	L1MB7	LINE	L1	-1305	5701	4929	4
chrX	82021735	82021736	chunk0210_217_1	5.6425	AR_DHT_Control	chrX	82021381	82021868	-74019027	+	MLT2B4	LTR	ERVL	1	556	0	4
chrX	82093662	82093663	chunk0210_218_1	10.7541	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82092883	82096237	-73944658	-	L1PB4	LINE	L1	-13	7205	3732	4
chrX	82217304	82217305	chunk0210_219_1	11.1716	AR_DHT_Control	chrX	82213138	82220837	-73820058	-	L1PA13	LINE	L1	-4	8154	571	4
chrX	82316136	82316137	chunk0210_220_1	5.86499	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82315759	82316409	-73724486	+	L1MD	LINE	L1	4670	5339	-807	4
chrX	82335556	82335557	chunk0210_223_1	27.93944	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82335336	82335945	-73704950	+	MER67C	LTR	ERV1	1	693	-18	4
chrX	82398669	82398670	chunk0210_229_1	58.1821	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	82398537	82399726	-73641169	+	Tigger3b	DNA	TcMar-Tigger	3	1231	0	4
chrX	82509709	82509710	chunk0210_232_1	18.7412	AR_DHT_Control	chrX	82509238	82509740	-73531155	+	ERVL-B4-int	LTR	ERVL	5159	5714	0	4
chrX	82542052	82542053	chunk0210_233_1	14.2911	AR_DHT_Control	chrX	82541977	82542538	-73498357	+	L1PA17	LINE	L1	4791	5350	-796	4
chrX	82682349	82682350	chunk0210_234_1	35.4849	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82681639	82682655	-73358240	+	L1PA16	LINE	L1	5126	6165	-1	4
chrX	82718391	82718392	chunk0210_240_1	3.97649	AR_DHT_Control	chrX	82718296	82718703	-73322192	-	MLT1B	LTR	ERVL-MaLR	0	390	1	4
chrX	82748174	82748175	chunk0210_241_1	5.6425	AR_DHT_Control	chrX	82748100	82748485	-73292410	-	L1ME4b	LINE	L1	-758	134	2	4
chrX	82917989	82917990	chunk0210_247_1	26.594	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82916924	82918323	-73122572	+	MER31-int	LTR	ERV1	3104	4531	-405	4
chrX	82945431	82945432	chunk0210_249_1	7.36432	AR_DHT_Control	chrX	82945402	82945784	-73095111	+	L1PA8A	LINE	L1	1377	1776	-5077	4
chrX	82978589	82978590	chunk0210_250_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	82976747	82979628	-73061267	+	L1PA15	LINE	L1	3785	6783	-2	4
chrX	82987417	82987418	chunk0210_251_1	8.27376	AR_DHT_Control	chrX	82987177	82987438	-73053457	+	MIRb	SINE	MIR	5	265	-3	4
chrX	83116221	83116222	chunk0210_254_1	26.66239	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	83116031	83116403	-72924492	-	L1MC3	LINE	L1	-599	5845	5437	4
chrX	83314418	83314419	chunk0210_255_1	19.32884	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	83313712	83314934	-72725961	+	L1MA2	LINE	L1	5004	6299	-1	4
chrX	83896213	83896214	chunk0210_257_1	9.21264	AR_DHT_Control	chrX	83893247	83897066	-72143829	-	L1M1	LINE	L1	-864	6701	2181	4
chrX	83936201	83936202	chunk0210_258_1	23.6595	AR_DHT_Control	chrX	83934808	83937921	-72102974	-	L1PB4	LINE	L1	-11	6765	3665	4
chrX	83966611	83966612	chunk0210_259_1	141.4721	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	83966519	83968259	-72072636	+	L1M2	LINE	L1	1470	3155	-3690	4
chrX	84037869	84037870	chunk0210_261_1	19.64363	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	84037077	84038810	-72002085	-	L1PB4	LINE	L1	-13	6859	5207	4
chrX	84266891	84266892	chunk0210_271_1	38.3034	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	84265679	84268020	-71772875	-	L1P2	LINE	L1	-3824	2495	178	4
chrX	84291789	84291790	chunk0210_272_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	84289037	84293482	-71747413	-	L1M1	LINE	L1	-709	7012	2509	4
chrX	84532423	84532424	chunk0210_273_1	8.27376	AR_DHT_Control	chrX	84531806	84532952	-71507943	-	L1MA1	LINE	L1	-6	6296	5138	4
chrX	84648317	84648318	chunk0210_277_1	12.69501	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	84648308	84648814	-71392081	-	L2a	LINE	L2	0	3426	2884	4
chrX	84842881	84842882	chunk0210_279_1	28.5413	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	84842854	84843031	-71197864	+	HAL1ME	LINE	L1	917	1155	-1310	4
chrX	84889937	84889938	chunk0210_282_1	30.1561	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	84889878	84890057	-71150838	-	HAL1ME	LINE	L1	-1310	1155	917	4
chrX	84959465	84959466	chunk0210_285_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	84959184	84959801	-71081094	+	LTR10C	LTR	ERV1	1	591	0	4
chrX	85598329	85598330	chunk0210_286_1	8.27376	AR_DHT_Control	chrX	85598127	85599863	-70441032	+	L1PB1	LINE	L1	5098	6863	-4	4
chrX	85844281	85844282	chunk0210_289_1	9.21264	AR_DHT_Control	chrX	85843686	85844383	-70196512	+	L1M2	LINE	L1	3494	4199	-3363	4
chrX	85877730	85877731	chunk0210_291_1	82.6225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	85877310	85877745	-70163150	+	L1MA3	LINE	L1	5864	6305	0	4
chrX	86930135	86930136	chunk0210_294_1	8.75738	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	86930055	86930205	-69110690	+	L1MA7	LINE	L1	6168	6291	0	4
chrX	87417302	87417303	chunk0210_296_1	10.1791	AR_DHT_Control	chrX	87416811	87417361	-68623534	-	L1PA16	LINE	L1	-885	5261	4699	4
chrX	87485319	87485320	chunk0210_298_1	51.3592	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	87485248	87485898	-68554997	-	Tigger17a	DNA	TcMar-Tigger	0	654	1	4
chrX	88632043	88632044	chunk0210_302_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	88630836	88635913	-67404982	+	L1MA2	LINE	L1	2088	7145	-578	4
chrX	88857451	88857452	chunk0210_304_1	42.7891	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	88856841	88859236	-67181659	-	L1PA15	LINE	L1	0	6165	3759	4
chrX	88951239	88951240	chunk0210_306_1	42.7219	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	88950855	88951358	-67089537	-	L1MDb	LINE	L1	-5917	492	6	4
chrX	89847383	89847384	chunk0210_307_1	17.6003	AR_DHT_Control	chrX	89847339	89847456	-66193439	-	L1PA13	LINE	L1	-238	5913	5802	4
chrX	90058809	90058810	chunk0210_308_1	9.21264	AR_DHT_Control	chrX	90057268	90059027	-65981868	+	LTR49-int	LTR	ERV1	4567	6330	-1	4
chrX	90099107	90099108	chunk0210_309_1	32.3785	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	90097663	90099764	-65941131	-	L1M4	LINE	L1	-3477	3264	613	4
chrX	90268027	90268028	chunk0210_310_1	12.1886	AR_DHT_Control	chrX	90267863	90268160	-65772735	+	L1M5	LINE	L1	5176	5523	-720	4
chrX	90459184	90459185	chunk0210_311_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	90459143	90459266	-65581629	-	LTR35B	LTR	ERV1	-485	120	1	4
chrX	91331705	91331706	chunk0210_313_1	60.83866	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	91331149	91332740	-64708155	+	L1PB1	LINE	L1	634	2493	-4370	4
chrX	91395529	91395530	chunk0210_315_1	61.1753	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	91394564	91395567	-64645328	-	L1MCa	LINE	L1	-5038	1713	627	4
chrX	92754564	92754565	chunk0210_321_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	92754206	92754732	-63286163	+	L1PA13	LINE	L1	5645	6162	-1	4
chrX	92759669	92759670	chunk0210_322_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	92759211	92761038	-63279857	-	L1MC5a	LINE	L1	-100	2891	348	4
chrX	93473895	93473896	chunk0210_323_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	93467452	93474683	-62566212	+	L1PA16	LINE	L1	828	8151	-10	4
chrX	93657722	93657723	chunk0210_324_1	18.9697	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	93657620	93657734	-62383161	+	MIR	SINE	MIR	4	120	-142	4
chrX	94252477	94252478	chunk0210_327_1	8.27376	AR_DHT_Control	chrX	94252338	94252569	-61788326	+	MIR	SINE	MIR	4	258	-10	4
chrX	94600481	94600482	chunk0210_328_1	36.4761	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	94599902	94600549	-61440346	-	LTR66	LTR	ERVL	0	610	3	4
chrX	94698310	94698311	chunk0210_330_1	8.27376	AR_DHT_Control	chrX	94698159	94698389	-61342506	+	PABL_B	LTR	ERV1	437	667	0	4
chrX	94773143	94773144	chunk0210_331_1	8.27376	AR_DHT_Control	chrX	94772973	94773391	-61267504	+	MLT2A2	LTR	ERVL	9	446	-7	4
chrX	95000213	95000214	chunk0210_332_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	95000145	95000418	-61040477	-	L1MC1	LINE	L1	-2368	3778	3484	4
chrX	95024007	95024008	chunk0210_333_1	21.52394	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	95023576	95024012	-61016883	+	LTR16A	LTR	ERVL	9	445	-6	4
chrX	95464119	95464120	chunk0210_337_1	16.9288	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	95464051	95464139	-60576756	+	MIRc	SINE	MIR	178	266	-2	4
chrX	96179709	96179710	chunk0210_348_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	96179624	96179840	-59861055	-	L1PB4	LINE	L1	-113	6043	5831	4
chrX	96246115	96246116	chunk0210_351_1	4.83532	AR_DHT_Control	chrX	96246088	96246337	-59794558	-	MIRb	SINE	MIR	0	268	15	4
chrX	96308528	96308529	chunk0210_352_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	96308257	96310168	-59730727	+	L1MC2	LINE	L1	4522	6333	-11	4
chrX	96389813	96389814	chunk0210_354_1	34.1663	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	96389766	96390083	-59650812	-	L2c	LINE	L2	0	3387	3079	4
chrX	96519859	96519860	chunk0210_361_1	9.21264	AR_DHT_Control	chrX	96518975	96520496	-59520399	-	L1PA16	LINE	L1	-500	5666	4126	4
chrX	96604716	96604717	chunk0210_364_1	9.21264	AR_DHT_Control	chrX	96604630	96605358	-59435537	-	L2a	LINE	L2	-1	3425	2655	4
chrX	96969459	96969460	chunk0210_369_1	13.2288	AR_DHT_Control	chrX	96968518	96970350	-59070545	-	L1PA16	LINE	L1	-782	5364	3510	4
chrX	97410220	97410221	chunk0210_378_1	121.6091	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	97409398	97414370	-58626525	+	L1PA6	LINE	L1	174	5129	-1190	4
chrX	97894874	97894875	chunk0210_389_1	16.4778	AR_DHT_Control	chrX	97894415	97894991	-58145904	-	L1MA1	LINE	L1	-10	6292	5709	4
chrX	97921825	97921826	chunk0210_392_1	24.06511	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	97921050	97927201	-58113694	+	L1PA6	LINE	L1	6	6148	-6	4
chrX	98111041	98111042	chunk0210_398_1	54.5265	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	98110985	98111070	-57929825	-	MIRb	SINE	MIR	-20	248	168	4
chrX	98976106	98976107	chunk0210_402_1	13.1462	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	98975391	98978618	-57062277	+	L1MD2	LINE	L1	4344	7664	-3	4
chrX	99552611	99552612	chunk0210_403_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	99552568	99552858	-56488037	-	L1ME1	LINE	L1	-345	5834	5558	4
chrX	100464431	100464432	chunk0210_406_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	100464124	100465006	-55575889	-	L1ME3G	LINE	L1	-13	911	3	4
chrX	100659134	100659135	chunk0210_408_1	97.8087	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	100658918	100659494	-55381401	-	L3	LINE	CR1	-1017	3082	2412	4
chrX	100709465	100709466	chunk0210_410_1	7.36432	AR_DHT_Control	chrX	100709211	100709522	-55331373	+	AluSz	SINE	Alu	1	303	-9	4
chrX	100890760	100890761	chunk0210_414_1	10.1791	AR_DHT_Control	chrX	100890725	100890939	-55149956	-	LTR82B	LTR	ERVL	-392	438	234	4
chrX	100980969	100980970	chunk0210_417_1	9.21264	AR_DHT_Control	chrX	100978152	100981525	-55059370	-	L1MA3	LINE	L1	-3438	4127	162	4
chrX	101150337	101150338	chunk0210_418_1	51.2832	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	101150141	101150368	-54890527	-	L1MC5a	LINE	L1	-1595	1182	911	4
chrX	102507463	102507464	chunk0210_423_1	26.1498	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	102507451	102508710	-53532185	+	L1M4	LINE	L1	3831	5133	-1013	4
chrX	102534586	102534587	chunk0210_424_1	8.27376	AR_DHT_Control	chrX	102531877	102534835	-53506060	+	L1M1	LINE	L1	13	3180	-4385	4
chrX	103191642	103191643	chunk0210_427_1	23.5294	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	103191577	103192380	-52848515	-	L1MC5a	LINE	L1	-425	2352	1566	4
chrX	103236567	103236568	chunk0210_429_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	103236551	103236639	-52804256	-	MLT2A2	LTR	ERVL	0	554	495	4
chrX	103341347	103341348	chunk0210_430_1	44.1965	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	103340875	103341447	-52699448	-	L1MB4	LINE	L1	-5151	1456	757	4
chrX	103658925	103658926	chunk0210_435_1	28.7205	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	103658863	103659514	-52381381	-	MER66-int	LTR	ERV1	-5581	1095	400	4
chrX	103699428	103699429	chunk0210_437_1	31.5779	AR_DHT_Control	chrX	103698731	103699505	-52341390	-	L2c	LINE	L2	-4	3383	2545	4
chrX	103770249	103770250	chunk0210_439_1	49.67762	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	103769864	103770321	-52270574	-	MER90a	LTR	ERV1	-68	546	69	4
chrX	104165961	104165962	chunk0210_442_1	24.5648	AR_DHT_Control	chrX	104165790	104166000	-51874895	-	L2c	LINE	L2	-179	3196	2972	4
chrX	106042413	106042414	chunk0210_447_1	12.55427	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	106041795	106043506	-49997389	+	ERVL-E-int	LTR	ERVL	3721	5499	-168	4
chrX	106809421	106809422	chunk0210_458_1	61.3755	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	106809161	106809483	-49231412	-	L2a	LINE	L2	-5	3421	3071	4
chrX	106992877	106992878	chunk0210_459_1	12.55427	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	106992796	106993141	-49047754	+	L2b	LINE	L2	3028	3374	-1	4
chrX	107314678	107314679	chunk0210_461_1	6.28117	AR_DHT_Control	chrX	107314407	107315010	-48725885	+	L2a	LINE	L2	2795	3426	0	4
chrX	107464578	107464579	chunk0210_464_1	22.1531	AR_DHT_Control	chrX	107464515	107464641	-48576254	-	L3	LINE	CR1	-416	3683	3557	4
chrX	107536530	107536531	chunk0210_465_1	98.83702	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	107536372	107536781	-48504114	-	L1MD2	LINE	L1	-443	5916	5542	4
chrX	107548556	107548557	chunk0210_467_1	6.48643	AR_DHT_Control	chrX	107548493	107548624	-48492271	-	L2b	LINE	L2	-3	3372	3237	4
chrX	107574417	107574418	chunk0210_469_1	15.36905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	107574322	107574542	-48466353	+	MER58A	DNA	hAT-Charlie	9	224	0	4
chrX	107627003	107627004	chunk0211_1_1	119.75937	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	107626616	107627122	-48413773	+	L2a	LINE	L2	2930	3426	0	4
chrX	107670367	107670368	chunk0211_4_1	20.23369	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	107670342	107670447	-48370448	+	MamRTE1	LINE	RTE-BovB	2361	2467	-1345	4
chrX	107675927	107675928	chunk0211_6_1	16.604	AR_DHT_Control	chrX	107675895	107675932	-48364963	-	MER5A1	DNA	hAT-Charlie	0	166	114	4
chrX	107727040	107727041	chunk0211_15_1	15.41268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	107726855	107727081	-48313814	+	Mam_R4	LINE	Dong-R4	3365	3647	-162	4
chrX	107778898	107778899	chunk0211_20_1	8.27376	AR_DHT_Control	chrX	107778758	107778995	-48261900	-	L2c	LINE	L2	-4	3383	3130	4
chrX	107929391	107929392	chunk0211_25_1	23.345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	107929281	107929436	-48111459	+	L2b	LINE	L2	2799	2969	-450	4
chrX	107972617	107972618	chunk0211_27_1	6.48643	AR_DHT_Control	chrX	107972587	107972779	-48068116	-	L2b	LINE	L2	-8	3418	3222	4
chrX	108001441	108001442	chunk0211_28_1	8.27376	AR_DHT_Control	chrX	108000456	108004975	-48035920	+	L1PA16	LINE	L1	12	4876	-1973	4
chrX	108331402	108331403	chunk0211_33_1	6.48643	AR_DHT_Control	chrX	108331274	108331604	-47709291	-	Tigger3a	DNA	TcMar-Tigger	-9	339	2	4
chrX	108572801	108572802	chunk0211_44_1	38.1292	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	108572071	108573352	-47467543	+	L2a	LINE	L2	2036	3424	-2	4
chrX	108609845	108609846	chunk0211_47_1	19.67562	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	108608383	108610018	-47430877	-	L1ME2z	LINE	L1	-8	6436	4657	4
chrX	109458475	109458476	chunk0211_52_1	30.8143	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	109458262	109458488	-46582407	+	MIRb	SINE	MIR	14	268	0	4
chrX	109631883	109631884	chunk0211_54_1	13.46371	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	109631780	109632125	-46408770	-	L1ME2z	LINE	L1	-592	5852	5514	4
chrX	109680017	109680018	chunk0211_57_1	193.7763	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	109679916	109680275	-46360620	+	LTR40b	LTR	ERVL	1	462	0	4
chrX	109777964	109777965	chunk0211_62_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	109777944	109778024	-46262871	-	L2b	LINE	L2	-1	3374	3286	4
chrX	109894415	109894416	chunk0211_65_1	42.9823	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	109894340	109894882	-46146013	-	L1MD2	LINE	L1	-4329	2304	1720	4
chrX	109908928	109908929	chunk0211_66_1	8.27376	AR_DHT_Control	chrX	109908885	109909144	-46131751	-	Tigger19a	DNA	TcMar-Tigger	0	323	77	4
chrX	109926287	109926288	chunk0211_67_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	109926216	109926447	-46114448	-	Tigger19a	DNA	TcMar-Tigger	-92	231	2	4
chrX	109995351	109995352	chunk0211_70_1	149.1969	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	109995213	109995416	-46045479	+	MIRb	SINE	MIR	4	219	-49	4
chrX	110056795	110056796	chunk0211_74_1	57.995	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	110056003	110056907	-45983988	-	L1MB8	LINE	L1	0	6178	5260	4
chrX	110057947	110057948	chunk0211_76_1	13.37438	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	110056910	110058237	-45982658	-	L1MA9	LINE	L1	-40	6914	5501	4
chrX	110086250	110086251	chunk0211_80_1	10.8786	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	110085464	110086266	-45954629	-	L1M6	LINE	L1	-5601	895	3	4
chrX	110104184	110104185	chunk0211_82_1	244.5496	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	110103874	110104894	-45936001	+	Tigger2b_Pri	DNA	TcMar-Tigger	3	1068	0	4
chrX	110230209	110230210	chunk0211_89_1	9.21264	AR_DHT_Control	chrX	110229538	110232609	-45808286	+	L1PA6	LINE	L1	180	3254	-3065	4
chrX	110533668	110533669	chunk0211_91_1	5.6425	AR_DHT_Control	chrX	110533461	110533764	-45507131	-	MLT1J1	LTR	ERVL-MaLR	-129	315	1	4
chrX	110836053	110836054	chunk0211_97_1	14.26966	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	110836029	110836122	-45204773	-	MIR	SINE	MIR	-169	93	2	4
chrX	111029857	111029858	chunk0211_103_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	111029304	111030261	-45010634	-	Tigger2b_Pri	DNA	TcMar-Tigger	0	1068	109	4
chrX	111151897	111151898	chunk0211_104_1	27.1858	AR_DHT_Control	chrX	111151563	111152104	-44888791	-	MER44B	DNA	TcMar-Tigger	-1	549	2	4
chrX	111668931	111668932	chunk0211_110_1	31.00393	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	111668867	111669012	-44371883	+	Charlie1b	DNA	hAT-Charlie	51	198	-325	4
chrX	111988583	111988584	chunk0211_114_1	6.48643	AR_DHT_Control	chrX	111988577	111988695	-44052200	+	L2c	LINE	L2	3282	3385	-2	4
chrX	112002001	112002002	chunk0211_115_1	16.60263	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	112001898	112002306	-44038589	+	L2	LINE	L2	2565	2992	-427	4
chrX	112128987	112128988	chunk0211_118_1	19.67562	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	112128687	112129430	-43911465	+	L1MEd	LINE	L1	4953	5726	-458	4
chrX	112334127	112334128	chunk0211_125_1	34.1976	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	112333664	112334459	-43706436	-	L1MA1	LINE	L1	-8	6294	5495	4
chrX	112551105	112551106	chunk0211_126_1	18.27473	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	112550925	112551894	-43489001	-	L1PA6	LINE	L1	-5218	966	5	4
chrX	112691574	112691575	chunk0211_131_1	104.98923	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	112691379	112691973	-43348922	+	L1MB5	LINE	L1	5436	6009	-165	4
chrX	112756837	112756838	chunk0211_133_1	34.7714	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	112756806	112756873	-43284022	+	L2c	LINE	L2	2045	2112	-1307	4
chrX	112794752	112794753	chunk0211_135_1	8.27376	AR_DHT_Control	chrX	112794731	112794795	-43246100	+	MIRb	SINE	MIR	179	246	-22	4
chrX	112902116	112902117	chunk0211_142_1	21.97532	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	112901932	112902122	-43138773	-	L2c	LINE	L2	-20	3367	3190	4
chrX	113073246	113073247	chunk0211_143_1	7.36432	AR_DHT_Control	chrX	113073143	113073473	-42967422	+	L2c	LINE	L2	3063	3367	-8	4
chrX	113417789	113417790	chunk0211_144_1	40.5453	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	113414778	113419462	-42621433	+	L1MA2	LINE	L1	126	4848	-2717	4
chrX	113455197	113455198	chunk0211_146_1	13.2288	AR_DHT_Control	chrX	113453624	113455386	-42585509	-	L1PB2	LINE	L1	-3	6148	4372	4
chrX	113603783	113603784	chunk0211_147_1	10.1791	AR_DHT_Control	chrX	113603756	113604149	-42436746	+	MER70C	LTR	ERVL	63	559	-19	4
chrX	113759653	113759654	chunk0211_148_1	89.79	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	113759628	113759679	-42281216	+	(TTGCT)n	Simple_repeat	Simple_repeat	1	53	0	4
chrX	114214373	114214374	chunk0211_156_1	52.4575	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	114214192	114214414	-41826481	+	L1MC	LINE	L1	3823	4059	-2087	4
chrX	114226721	114226722	chunk0211_159_1	31.5699	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	114226612	114226740	-41814155	+	L2c	LINE	L2	2793	2926	-493	4
chrX	114564184	114564185	chunk0211_160_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	114564126	114564389	-41476506	+	L1PA13	LINE	L1	5891	6155	-8	4
chrX	114813910	114813911	chunk0211_164_1	6.48643	AR_DHT_Control	chrX	114813881	114814173	-41226722	-	L2c	LINE	L2	-87	3300	3023	4
chrX	115030817	115030818	chunk0211_165_1	18.21884	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	115030514	115030874	-41010021	+	MLT1J	LTR	ERVL-MaLR	1	365	-147	4
chrX	115236813	115236814	chunk0211_167_1	14.79564	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	115236789	115237278	-40803617	+	CR1_Mam	LINE	CR1	1476	1981	-223	4
chrX	115240813	115240814	chunk0211_168_1	56.03893	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	115240792	115241233	-40799662	+	MER101B	LTR	ERV1	1	448	-122	4
chrX	115258721	115258722	chunk0211_169_1	10.8017	AR_DHT_Control	chrX	115258504	115258918	-40781977	+	L2c	LINE	L2	2917	3383	-4	4
chrX	115405982	115405983	chunk0211_172_1	33.2067	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	115405936	115406122	-40634773	+	L2c	LINE	L2	3183	3380	-7	4
chrX	116096207	116096208	chunk0211_174_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	116095737	116096498	-39944397	-	L1M3	LINE	L1	-459	5709	4903	4
chrX	116472750	116472751	chunk0211_176_1	5.14593	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	116472203	116473503	-39567392	-	L1MA2	LINE	L1	-2898	4667	3356	4
chrX	116625276	116625277	chunk0211_177_1	7.48576	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	116624718	116625453	-39415442	+	L1MB1	LINE	L1	5416	6166	-2	4
chrX	116924699	116924700	chunk0211_178_1	8.1755	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	116924510	116924881	-39116014	-	MER51B	LTR	ERV1	0	377	1	4
chrX	116929634	116929635	chunk0211_179_1	9.1547	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	116929620	116929951	-39110944	-	MER4A1	LTR	ERV1	-131	341	1	4
chrX	117034308	117034309	chunk0211_180_1	15.222	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	117034286	117034541	-39006354	-	L1ME4b	LINE	L1	-289	603	335	4
chrX	117298831	117298832	chunk0211_185_1	112.55037	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	117298142	117299107	-38741788	-	L1PA13	LINE	L1	-399	6386	5414	4
chrX	117644565	117644566	chunk0211_196_1	19.24119	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	117644413	117644576	-38396319	-	L2	LINE	L2	-779	2640	2470	4
chrX	117947495	117947496	chunk0211_199_1	27.80329	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	117947437	117947863	-38093032	-	Tigger10	DNA	TcMar-Tigger	-8	1836	1379	4
chrX	118022917	118022918	chunk0211_202_1	88.8587	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	118022169	118023128	-38017767	-	L1MA9	LINE	L1	-478	5834	4901	4
chrX	118067053	118067054	chunk0211_203_1	10.1791	AR_DHT_Control	chrX	118066990	118068170	-37972725	-	Tigger3b	DNA	TcMar-Tigger	0	1231	2	4
chrX	118208007	118208008	chunk0211_207_1	17.08345	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	118207670	118208013	-37832882	+	L2c	LINE	L2	3069	3384	-3	4
chrX	118277663	118277664	chunk0211_212_1	36.8101	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	118277581	118277753	-37763142	+	L1ME4b	LINE	L1	703	877	-15	4
chrX	118336180	118336181	chunk0211_213_1	8.27376	AR_DHT_Control	chrX	118336033	118336376	-37704519	+	L1MA7	LINE	L1	5796	6124	-167	4
chrX	118584317	118584318	chunk0211_219_1	159.7358	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	118584056	118584663	-37456232	-	L1ME2	LINE	L1	-9	6155	5539	4
chrX	118666628	118666629	chunk0211_224_1	12.1886	AR_DHT_Control	chrX	118666274	118668452	-37372443	-	L1ME2	LINE	L1	-11	6153	3792	4
chrX	118928499	118928500	chunk0211_233_1	8.27376	AR_DHT_Control	chrX	118928399	118928509	-37112386	+	LTR75	LTR	ERVL	26	142	-420	4
chrX	119003563	119003564	chunk0211_236_1	7.37742	AR_DHT_Control	chrX	119003325	119004156	-37036739	-	L1ME3B	LINE	L1	-1094	5052	4124	4
chrX	119060845	119060846	chunk0211_237_1	29.2667	AR_DHT_Control	chrX	119060302	119062266	-36978629	+	L1MA9	LINE	L1	4294	6306	-6	4
chrX	119562019	119562020	chunk0211_240_1	22.2669	AR_DHT_Control	chrX	119562009	119562114	-36478781	-	L2a	LINE	L2	0	3426	3333	4
chrX	120550796	120550797	chunk0211_250_1	19.6196	AR_DHT_Control	chrX	120550792	120551099	-35489796	+	L1ME4b	LINE	L1	575	890	-2	4
chrX	120659809	120659810	chunk0211_253_1	61.2535	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	120659747	120659832	-35381063	+	L2a	LINE	L2	3334	3422	-4	4
chrX	121002889	121002890	chunk0211_261_1	45.2395	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	121002118	121003489	-35037406	-	LOR1-int	LTR	ERV1	-2378	2493	929	4
chrX	121113805	121113806	chunk0211_263_1	6.48643	AR_DHT_Control	chrX	121113762	121113809	-34927086	-	L2b	LINE	L2	-4	3371	3325	4
chrX	121113805	121113806	chunk0211_263_1	6.48643	AR_DHT_Control	chrX	121113768	121113823	-34927072	-	MIR	SINE	MIR	-4	258	196	4
chrX	121465391	121465392	chunk0211_267_1	25.491	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	121463466	121465814	-34575081	-	L1MA2	LINE	L1	-2513	5052	2696	4
chrX	121655470	121655471	chunk0211_272_1	32.7612	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	121654924	121655494	-34385401	-	MER76	LTR	ERVL	-33	658	1	4
chrX	121689489	121689490	chunk0211_274_1	45.9526	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	121689326	121689809	-34351086	-	L1MB1	LINE	L1	-36	6132	5658	4
chrX	122261601	122261602	chunk0211_280_1	46.0225	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	122260249	122264960	-33775935	-	L1MA1	LINE	L1	-4	7717	3051	4
chrX	122281609	122281610	chunk0211_284_1	33.0569	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	122281160	122281846	-33759049	-	L1M1	LINE	L1	-1467	4679	3983	4
chrX	122386196	122386197	chunk0211_288_1	18.16931	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	122386174	122386347	-33654548	+	MER45A	DNA	hAT-Tip100	2	178	0	4
chrX	122503719	122503720	chunk0211_289_1	22.52224	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	122503528	122505426	-33535469	-	L1PA16	LINE	L1	-9	6157	4316	4
chrX	122566207	122566208	chunk0211_291_1	33.28634	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	122566017	122566438	-33474457	+	MLT1K	LTR	ERVL-MaLR	157	570	-25	4
chrX	122711355	122711356	chunk0211_293_1	15.3744	AR_DHT_Control	chrX	122711082	122711359	-33329536	+	AluJr	SINE	Alu	7	282	-30	4
chrX	122744349	122744350	chunk0211_294_1	10.1791	AR_DHT_Control	chrX	122744249	122744479	-33296416	+	L1MDb	LINE	L1	2782	3114	-4451	4
chrX	122897316	122897317	chunk0211_297_1	7.36432	AR_DHT_Control	chrX	122897151	122897392	-33143503	+	MIR	SINE	MIR	8	248	-14	4
chrX	122966706	122966707	chunk0211_298_1	15.3744	AR_DHT_Control	chrX	122966627	122966724	-33074171	-	L2c	LINE	L2	-1	3386	3292	4
chrX	123264369	123264370	chunk0211_301_1	14.2911	AR_DHT_Control	chrX	123264279	123264824	-32776071	-	MER67A	LTR	ERV1	0	543	1	4
chrX	123665337	123665338	chunk0211_312_1	65.966	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	123665098	123665482	-32375413	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	4
chrX	123745683	123745684	chunk0211_316_1	22.34645	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	123745114	123745733	-32295162	-	ERVL-E-int	LTR	ERVL	-2470	3197	2539	4
chrX	123749881	123749882	chunk0211_318_1	33.5323	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	123749873	123750030	-32290865	-	L1ME3G	LINE	L1	-256	668	513	4
chrX	123874068	123874069	chunk0211_322_1	15.3744	AR_DHT_Control	chrX	123873981	123874220	-32166675	-	LTR83	LTR	ERVL	-515	265	8	4
chrX	123906782	123906783	chunk0211_324_1	14.2911	AR_DHT_Control	chrX	123906562	123906935	-32133960	+	L2c	LINE	L2	3039	3383	-4	4
chrX	123986578	123986579	chunk0211_325_1	5.6425	AR_DHT_Control	chrX	123986488	123986622	-32054273	+	MIRb	SINE	MIR	5	170	-98	4
chrX	124080168	124080169	chunk0211_331_1	32.27834	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	124079970	124080325	-31960570	-	L1MA9	LINE	L1	0	6312	5947	4
chrX	124085211	124085212	chunk0211_333_1	120.00373	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	124085173	124085322	-31955573	+	L1ME3C	LINE	L1	5940	6115	-8	4
chrX	124239240	124239241	chunk0211_337_1	44.3647	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	124239220	124239767	-31801128	-	MLT1D	LTR	ERVL-MaLR	0	505	1	4
chrX	124294140	124294141	chunk0211_338_1	7.36432	AR_DHT_Control	chrX	124294087	124294285	-31746610	-	AluJb	SINE	Alu	-10	302	103	4
chrX	124307581	124307582	chunk0211_339_1	24.4287	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	124307446	124307714	-31733181	-	L2c	LINE	L2	-153	3234	2969	4
chrX	124911940	124911941	chunk0211_342_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	124911929	124912054	-31128841	-	L2a	LINE	L2	-4	3422	3300	4
chrX	125063131	125063132	chunk0211_343_1	9.21264	AR_DHT_Control	chrX	125062770	125063216	-30977679	+	L3	LINE	CR1	2826	3341	-758	4
chrX	125309161	125309162	chunk0211_349_1	55.3126	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	125309059	125309199	-30731696	+	L2a	LINE	L2	3225	3359	-67	4
chrX	125310729	125310730	chunk0211_351_1	15.87595	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	125310303	125311063	-30729832	-	L2c	LINE	L2	-688	2731	1926	4
chrX	125449833	125449834	chunk0211_353_1	50.9904	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	125444291	125450734	-30590161	+	L1PA10	LINE	L1	11	6353	0	4
chrX	125583693	125583694	chunk0211_356_1	87.66733	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	125583412	125583841	-30457054	+	MLT1C	LTR	ERVL-MaLR	7	435	-32	4
chrX	125631362	125631363	chunk0211_360_1	15.36905	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	125629048	125634462	-30406433	+	L1PB3	LINE	L1	1377	6921	-2	4
chrX	125866641	125866642	chunk0211_364_1	21.3427	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	125865469	125866856	-30174039	+	L1PA16	LINE	L1	5374	6763	-106	4
chrX	126008923	126008924	chunk0211_366_1	17.55268	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	126004918	126013083	-30027812	+	L1PREC2	LINE	L1	7	8155	0	4
chrX	126061824	126061825	chunk0211_368_1	5.6425	AR_DHT_Control	chrX	126060398	126062528	-29978367	+	L1M1	LINE	L1	2572	4748	-1398	4
chrX	126317879	126317880	chunk0211_370_1	66.9944	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	126317717	126318144	-29722751	+	MER83	LTR	ERV1	2	436	-12	4
chrX	126439935	126439936	chunk0211_371_1	7.36432	AR_DHT_Control	chrX	126439831	126439984	-29600911	-	MLT1K	LTR	ERVL-MaLR	-159	436	287	4
chrX	126655185	126655186	chunk0211_376_1	8.27376	AR_DHT_Control	chrX	126654819	126655395	-29385500	+	MLT1E1A	LTR	ERVL-MaLR	9	680	0	4
chrX	126791185	126791186	chunk0211_377_1	19.2285	AR_DHT_Control	chrX	126789556	126791590	-29249305	-	L1MC3	LINE	L1	-439	7346	5268	4
chrX	126899611	126899612	chunk0211_379_1	114.9592	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	126899315	126900304	-29140591	+	L1MC2	LINE	L1	613	1720	-5031	4
chrX	127806398	127806399	chunk0211_386_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	127806231	127806440	-28234455	-	Tigger19b	DNA	TcMar-Tigger	-233	317	103	4
chrX	128048685	128048686	chunk0211_387_1	11.5534	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	128048633	128048985	-27991910	-	L1M4b	LINE	L1	-2875	4131	3757	4
chrX	128104493	128104494	chunk0211_389_1	27.2812	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	128104459	128104777	-27936118	-	L1PA16	LINE	L1	-9	6157	5822	4
chrX	128505231	128505232	chunk0211_396_1	30.41613	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	128504869	128505322	-27535573	-	MER70A	LTR	ERVL	0	472	1	4
chrX	128700937	128700938	chunk0211_402_1	57.705	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	128700924	128701259	-27339636	+	L1MC1	LINE	L1	5989	6333	0	4
chrX	128883145	128883146	chunk0211_413_1	34.99639	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	128883039	128883406	-27157489	+	Tigger3a	DNA	TcMar-Tigger	1	348	0	4
chrX	128894529	128894530	chunk0211_414_1	10.1791	AR_DHT_Control	chrX	128893960	128895653	-27145242	-	Ricksha_0	DNA	MULE-MuDR	-1	1732	1	4
chrX	128961559	128961560	chunk0211_417_1	87.8049	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	128960366	128961577	-27079318	-	L2c	LINE	L2	-214	3161	1929	4
chrX	129018600	129018601	chunk0211_420_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	129016527	129018971	-27021924	-	L1PB3	LINE	L1	-3	6151	3738	4
chrX	129188755	129188756	chunk0211_423_1	15.8999	AR_DHT_Control	chrX	129188641	129188769	-26852126	+	MIR	SINE	MIR	110	248	-14	4
chrX	129196243	129196244	chunk0211_426_1	4.11943	AR_DHT_Control	chrX	129195925	129196488	-26844407	-	MLT1F2	LTR	ERVL-MaLR	-2	558	2	4
chrX	129320207	129320208	chunk0211_427_1	12.1886	AR_DHT_Control	chrX	129319788	129320227	-26720668	-	LTR40b	LTR	ERVL	0	462	29	4
chrX	129433709	129433710	chunk0211_432_1	306.3023	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	129433688	129433827	-26607068	+	L2c	LINE	L2	3242	3383	-4	4
chrX	129525224	129525225	chunk0211_435_1	4.83532	AR_DHT_Control	chrX	129525196	129525501	-26515394	-	MamRTE1	LINE	RTE-BovB	0	3812	3487	4
chrX	129551201	129551202	chunk0211_438_1	7.70585	AR_DHT_Control	chrX	129551121	129551220	-26489675	-	L2a	LINE	L2	0	3426	3323	4
chrX	129613598	129613599	chunk0211_439_1	10.1791	AR_DHT_Control	chrX	129613593	129613805	-26427090	-	MIR	SINE	MIR	0	262	56	4
chrX	129625967	129625968	chunk0211_440_1	25.8337	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	129625384	129626893	-26414002	+	L1PA17	LINE	L1	4656	6143	-23	4
chrX	130166967	130166968	chunk0211_455_1	16.27964	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	130166960	130167112	-25873783	-	L2b	LINE	L2	-113	3262	3100	4
chrX	130197734	130197735	chunk0211_457_1	165.5608	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	130197506	130197888	-25843007	+	MER47B	DNA	TcMar-Tigger	37	418	0	4
chrX	130199375	130199376	chunk0211_458_1	25.4552	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	130199343	130199444	-25841451	-	L1M4	LINE	L1	-1304	4842	4738	4
chrX	130878151	130878152	chunk0212_122_1	21.21057	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	130878008	130878171	-25162724	-	UCON55	DNA	TcMar-Tigger	0	192	8	4
chrX	130941656	130941657	chunk0212_125_1	151.18677	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	130941246	130942284	-25098611	-	L1MA9	LINE	L1	-39	6273	5263	4
chrX	131149947	131149948	chunk0212_130_1	12.58697	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	131147851	131150213	-24890682	-	L1MC3	LINE	L1	-7	7778	5320	4
chrX	131206698	131206699	chunk0212_131_1	13.1462	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	131206646	131206911	-24833984	+	L2b	LINE	L2	3099	3354	-21	4
chrX	131566814	131566815	chunk0212_132_1	7.5995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	131566650	131566820	-24474075	+	MIRb	SINE	MIR	93	268	0	4
chrX	131722304	131722305	chunk0212_137_1	10.1791	AR_DHT_Control	chrX	131722144	131722366	-24318529	+	MER4A1	LTR	ERV1	52	246	-226	4
chrX	131819829	131819830	chunk0212_142_1	19.38843	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	131819551	131820105	-24220790	-	HAL1	LINE	L1	-110	2397	1841	4
chrX	131885723	131885724	chunk0212_145_1	32.8388	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	131884883	131886377	-24154518	-	L1PA15	LINE	L1	0	6165	4666	4
chrX	131889188	131889189	chunk0212_148_1	18.3315	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	131887617	131889623	-24151272	+	L1MD1	LINE	L1	3554	5639	-898	4
chrX	131921201	131921202	chunk0212_149_1	17.48052	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	131919866	131921285	-24119610	+	L1MA3	LINE	L1	1756	3229	-4336	4
chrX	132060295	132060296	chunk0212_152_1	46.71705	SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	132060286	132060379	-23980516	-	L2b	LINE	L2	-247	3140	3054	4
chrX	132117785	132117786	chunk0212_155_1	55.1806	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	132117784	132117922	-23922973	-	L1ME4c	LINE	L1	-325	505	378	4
chrX	132260735	132260736	chunk0212_157_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	132260530	132261542	-23779353	+	L1MA9	LINE	L1	5131	6165	-147	4
chrX	132520367	132520368	chunk0212_169_1	49.8705	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	132519791	132521117	-23519778	+	L1MC4	LINE	L1	4902	6310	-1572	4
chrX	132555708	132555709	chunk0212_171_1	12.1886	AR_DHT_Control	chrX	132555325	132555857	-23485038	-	L1MA6	LINE	L1	0	6300	5761	4
chrX	132862789	132862790	chunk0212_182_1	16.4778	AR_DHT_Control	chrX	132862747	132862834	-23178061	+	MIRb	SINE	MIR	165	259	-9	4
chrX	133760244	133760245	chunk0212_187_1	9.21264	AR_DHT_Control	chrX	133759067	133760970	-22279925	+	L1MC2	LINE	L1	4428	6342	-2	4
chrX	133973112	133973113	chunk0212_190_1	6.48643	AR_DHT_Control	chrX	133972690	133973154	-22067741	-	L2	LINE	L2	-787	2632	2123	4
chrX	134089539	134089540	chunk0212_191_1	5.6425	AR_DHT_Control	chrX	134085610	134089615	-21951280	+	L1PA17	LINE	L1	2204	6166	0	4
chrX	134207103	134207104	chunk0212_196_1	24.0385	AR_DHT_Control	chrX	134206713	134207444	-21833451	+	Tigger3	DNA	TcMar-Tigger	2282	3028	-1	4
chrX	134591499	134591500	chunk0212_204_1	42.8877	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	134591455	134592330	-21448565	-	L1MDa	LINE	L1	-475	6275	5347	4
chrX	135404355	135404356	chunk0212_209_1	17.6003	AR_DHT_Control	chrX	135404263	135404447	-20636448	+	ERVL-E-int	LTR	ERVL	4088	4266	-1401	4
chrX	135473371	135473372	chunk0212_210_1	10.4825	AR_DHT_Control	chrX	135473203	135473565	-20567330	+	L1MA9	LINE	L1	5695	6066	-246	4
chrX	136012129	136012130	chunk0212_218_1	6.92922	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	136012113	136012142	-20028753	+	MIR3	SINE	MIR	176	201	-7	4
chrX	136049792	136049793	chunk0212_220_1	68.721	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	136049680	136049814	-19991081	-	L2b	LINE	L2	-193	3182	3050	4
chrX	136453928	136453929	chunk0212_232_1	95.99523	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	136453863	136454070	-19586825	-	MER58A	DNA	hAT-Charlie	0	224	1	4
chrX	136523925	136523926	chunk0212_235_1	8.27376	AR_DHT_Control	chrX	136523536	136524156	-19516739	-	L1M3	LINE	L1	-559	5607	4992	4
chrX	136622907	136622908	chunk0212_236_1	6.48643	AR_DHT_Control	chrX	136622695	136623042	-19417853	-	Tigger3a	DNA	TcMar-Tigger	-3	345	1	4
chrX	137380156	137380157	chunk0212_240_1	28.06874	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	137380153	137380214	-18660681	-	L2a	LINE	L2	0	3426	3371	4
chrX	138556759	138556760	chunk0212_248_1	19.7868	AR_DHT_Control	chrX	138556704	138556826	-17484069	-	L2a	LINE	L2	-12	3414	3282	4
chrX	139063653	139063654	chunk0212_253_1	18.2232	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	139063198	139063682	-16977213	-	L1MEd	LINE	L1	-1769	4377	3852	4
chrX	139636149	139636150	chunk0212_262_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	139636062	139636352	-16404543	-	Tigger16a	DNA	TcMar-Tigger	-241	716	429	4
chrX	139657658	139657659	chunk0212_265_1	43.8637	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	139657581	139657739	-16383156	+	MER103C	DNA	hAT-Charlie	51	229	-68	4
chrX	139684058	139684059	chunk0212_269_1	7.48106	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	139683402	139685002	-16355893	+	L1MB8	LINE	L1	4559	6172	-6	4
chrX	139701934	139701935	chunk0212_270_1	31.021	AR_DHT_Control	chrX	139701924	139702283	-16338612	+	L2a	LINE	L2	2964	3339	-87	4
chrX	139759246	139759247	chunk0212_274_1	6.48643	AR_DHT_Control	chrX	139759194	139759334	-16281561	+	L2a	LINE	L2	3287	3426	0	4
chrX	139870623	139870624	chunk0212_275_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	139870502	139870650	-16170245	+	L1ME3G	LINE	L1	405	549	-375	4
chrX	140457991	140457992	chunk0212_280_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	140457521	140458173	-15582722	+	L2a	LINE	L2	2729	3426	0	4
chrX	140869273	140869274	chunk0212_286_1	39.7553	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	140866738	140870239	-15170656	+	L1PA15	LINE	L1	3250	6780	-5	4
chrX	141122699	141122700	chunk0212_295_1	6.43609	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	141122529	141122893	-14918002	+	L2b	LINE	L2	2984	3372	-3	4
chrX	141142283	141142284	chunk0212_299_1	32.5239	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	141142251	141142651	-14898244	+	L1M5	LINE	L1	4727	5133	-1013	4
chrX	141199307	141199308	chunk0212_300_1	10.1791	AR_DHT_Control	chrX	141199050	141199480	-14841415	-	LTR3B	LTR	ERVK	-4	433	1	4
chrX	142063320	142063321	chunk0212_302_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	142061806	142063673	-13977222	-	L1PB	LINE	L1	-2038	4108	2152	4
chrX	142245905	142245906	chunk0212_303_1	32.84649	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	142245446	142248184	-13792711	+	L1MA9	LINE	L1	4555	7157	-115	4
chrX	142275983	142275984	chunk0212_305_1	60.3291	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	142273981	142275985	-13764910	-	Tigger1	DNA	TcMar-Tigger	-424	1994	1	4
chrX	142452543	142452544	chunk0212_306_1	4.06817	AR_DHT_Control	chrX	142452540	142452647	-13588248	-	L2a	LINE	L2	-1194	2225	2117	4
chrX	142484239	142484240	chunk0212_307_1	6.48643	AR_DHT_Control	chrX	142484063	142484338	-13556557	+	LTR101_Mam	LTR	ERVL	542	829	0	4
chrX	142708341	142708342	chunk0212_309_1	58.8225	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	142707824	142708423	-13332472	+	L1MC2	LINE	L1	5340	5950	-569	4
chrX	143042378	143042379	chunk0212_310_1	20.22834	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	143042335	143042394	-12998501	-	L4_A_Mam	LINE	RTE-X	-431	4559	4500	4
chrX	143769219	143769220	chunk0212_319_1	10.1791	AR_DHT_Control	chrX	143768781	143770462	-12270433	+	L1PREC2	LINE	L1	3115	4817	-3324	4
chrX	143932602	143932603	chunk0212_321_1	152.604	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	143931650	143932877	-12108018	-	L1PB2	LINE	L1	0	6151	4956	4
chrX	143938248	143938249	chunk0212_322_1	9.21264	AR_DHT_Control	chrX	143937278	143938580	-12102315	+	L1MA2	LINE	L1	4988	6304	0	4
chrX	143963656	143963657	chunk0212_323_1	7.36432	AR_DHT_Control	chrX	143960673	143963877	-12077018	-	L1PA13	LINE	L1	-796	5970	2808	4
chrX	144006419	144006420	chunk0212_327_1	8.27376	AR_DHT_Control	chrX	144006258	144006583	-12034312	-	MER41C	LTR	ERV1	-1	520	231	4
chrX	144275996	144275997	chunk0212_329_1	37.687	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	144275933	144276002	-11764893	-	MIR3	SINE	MIR	-146	122	54	4
chrX	144845745	144845746	chunk0212_334_1	10.93586	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	144845673	144845768	-11195127	-	L2c	LINE	L2	-36	3351	3250	4
chrX	145066171	145066172	chunk0212_336_1	10.1791	AR_DHT_Control	chrX	145066115	145066469	-10974426	+	MER74C	LTR	ERVL	103	454	-6	4
chrX	146615121	146615122	chunk0212_341_1	158.916	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrX	146612372	146615134	-9425761	-	Tigger3	DNA	TcMar-Tigger	0	3029	164	4
chrX	146636217	146636218	chunk0212_342_1	7.36432	AR_DHT_Control	chrX	146635020	146636511	-9404384	+	L1MB8	LINE	L1	4662	6164	-14	4
chrX	146708271	146708272	chunk0212_343_1	22.33084	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	146708167	146708647	-9332248	-	LTR22B	LTR	ERVK	-3	489	5	4
chrX	146940342	146940343	chunk0212_344_1	43.706	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	146939887	146941229	-9099666	-	L1MA2	LINE	L1	-4067	3498	2161	4
chrX	147220087	147220088	chunk0212_346_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	147219348	147220141	-8820754	-	L1M5	LINE	L1	-868	5278	4451	4
chrX	148066276	148066277	chunk0212_349_1	12.58697	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	148065448	148068317	-7972578	-	L1MA4	LINE	L1	-2665	4897	2035	4
chrX	149399567	149399568	chunk0212_361_1	6.23615	AR_DHT_Control	chrX	149399516	149400202	-6640693	-	L1MB7	LINE	L1	-1537	4609	3887	4
chrX	149400594	149400595	chunk0212_362_1	14.1981	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	149400200	149401512	-6639383	+	L1PB1	LINE	L1	4879	6150	-1	4
chrX	149451510	149451511	chunk0212_364_1	16.42641	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	149451501	149451616	-6589279	-	MSTD	LTR	ERVL-MaLR	0	396	271	4
chrX	149643840	149643841	chunk0212_367_1	35.5395	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	149643113	149644148	-6396747	-	Tigger2	DNA	TcMar-Tigger	-1674	1044	1	4
chrX	149863622	149863623	chunk0212_369_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	149857911	149863818	-6177077	+	L1PA15	LINE	L1	9	5928	-838	4
chrX	149999291	149999292	chunk0212_371_1	25.9411	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	149999201	149999326	-6041569	+	L2a	LINE	L2	3298	3426	0	4
chrX	150065551	150065552	chunk0212_373_1	6.48643	AR_DHT_Control	chrX	150065497	150065777	-5975118	+	MER58A	DNA	hAT-Charlie	1	224	0	4
chrX	150789946	150789947	chunk0212_393_1	14.2911	AR_DHT_Control	chrX	150789892	150790851	-5250044	+	L1MC3	LINE	L1	5704	6621	-1164	4
chrX	150931545	150931546	chunk0212_398_1	11.1716	AR_DHT_Control	chrX	150931496	150931705	-5109190	-	Plat_L3	LINE	CR1	-201	3385	3172	4
chrX	151618797	151618798	chunk0212_404_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	151618481	151619558	-4421337	-	L2a	LINE	L2	0	3426	2153	4
chrX	151835375	151835376	chunk0212_406_1	10.1791	AR_DHT_Control	chrX	151833167	151836019	-4204876	+	L1MC1	LINE	L1	3443	6326	-7	4
chrX	152038779	152038780	chunk0212_412_1	27.1832	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	152038124	152039538	-4001357	-	MER4-int	LTR	ERV1	-2912	2627	996	4
chrX	152100991	152100992	chunk0212_414_1	5.6425	AR_DHT_Control	chrX	152099780	152101691	-3939204	+	L1MD2	LINE	L1	3055	5037	-1507	4
chrX	152101606	152101607	chunk0212_416_1	17.2307	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrX	152099780	152101691	-3939204	+	L1MD2	LINE	L1	3055	5037	-1507	4
chrX	152858214	152858215	chunk0212_420_1	14.2911	AR_DHT_Control	chrX	152858038	152858299	-3182596	-	L1MC5a	LINE	L1	-1022	8282	8038	4
chrX	153361997	153361998	chunk0212_427_1	9.21264	AR_DHT_Control	chrX	153361519	153362413	-2678482	+	MER49	LTR	ERV1	1	904	-19	4
chrX	153373621	153373622	chunk0212_428_1	12.8376	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	153372918	153373879	-2667016	+	HAL1M8	LINE	L1	228	1162	-1829	4
chrX	154047239	154047240	chunk0212_435_1	30.74252	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrX	154046472	154047404	-1993491	+	HAL1b	LINE	L1	377	1410	-1011	4
chrX	154525109	154525110	chunk0212_439_1	29.7296	AR_DHT_Control	chrX	154525108	154525261	-1515634	-	L1MEd	LINE	L1	-5363	1723	1556	4
chrX	154607698	154607699	chunk0212_440_1	5.6425	AR_DHT_Control	chrX	154607695	154607776	-1433119	+	AluJo	SINE	Alu	218	298	-14	4
chrX	154988153	154988154	chunk0212_441_1	7.36432	AR_DHT_Control	chrX	154988008	154988597	-1052298	+	LTR65	LTR	ERV1	1	662	-7	4
chrX	155234696	155234697	chunk0212_443_1	28.9576	AR_DHT_Control	chrX	155234419	155235101	-805794	-	HAL1M8	LINE	L1	-946	2045	1322	4
chrX	155614153	155614154	chunk0212_444_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrX	155614114	155614223	-426672	-	L2a	LINE	L2	0	3426	3318	4
chrY	3669132	3669133	chunk0212_2_1	13.4489	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	3667747	3669843	-53557572	-	L1M4	LINE	L1	-3477	3264	613	4
chrY	4047573	4047574	chunk0212_3_1	5.18995	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	4047430	4049367	-53178048	+	L1MC3	LINE	L1	1	1964	-4696	4
chrY	5871209	5871210	chunk0212_4_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	5870851	5871379	-51356036	+	L1PA13	LINE	L1	5645	6162	-1	4
chrY	6560096	6560097	chunk0212_7_1	15.7965	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	6559344	6561008	-50666407	+	L1MA4A	LINE	L1	3866	5576	-1986	4
chrY	8103284	8103285	chunk0212_13_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	8102583	8103574	-49123841	-	L1M2	LINE	L1	-829	5471	4394	4
chrY	8905867	8905868	chunk0212_19_1	11.1999	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	8905833	8905869	-48321546	+	L1MA7	LINE	L1	6226	6262	-29	4
chrY	9168865	9168866	chunk0212_20_1	9.06209	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	9168028	9170043	-48057372	-	L1M4c	LINE	L1	-4179	2205	25	4
chrY	10007060	10007061	chunk0212_22_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	10007019	10007206	-47220209	-	L2a	LINE	L2	0	3426	3222	4
chrY	10757230	10757231	chunk0212_24_1	9.18172	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	10756429	10758365	-46469050	+	(CCATT)n	Simple_repeat	Simple_repeat	4	1938	0	4
chrY	10793075	10793076	chunk0212_25_1	12.2311	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	10792914	10794064	-46433351	+	(ATTCC)n	Simple_repeat	Simple_repeat	5	1158	0	4
chrY	10852619	10852620	chunk0212_26_1	10.2385	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	10852205	10852803	-46374612	+	(TCCAT)n	Simple_repeat	Simple_repeat	3	602	0	4
chrY	10880885	10880886	chunk0212_28_1	27.03053	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;AR_DHT_Control	chrY	10880585	10881313	-46346102	+	(TCCAT)n	Simple_repeat	Simple_repeat	2	733	0	4
chrY	10907708	10907709	chunk0212_29_1	45.7717	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrY	10902341	10908519	-46318896	-	BSR/Beta	Satellite	Satellite	-14	6148	1	4
chrY	10911704	10911705	chunk0212_30_1	61.0675	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	10909111	10920936	-46306479	-	BSR/Beta	Satellite	Satellite	-38	11798	1	4
chrY	11099720	11099721	chunk0212_33_1	15.54263	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11096517	11103153	-46124262	-	GSATII	Satellite	centr	-32	6875	1	4
chrY	11281616	11281617	chunk0212_36_1	30.3595	AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11281373	11281813	-45945602	-	MER21C	LTR	ERVL	-22	916	457	4
chrY	11282351	11282352	chunk0212_37_1	5.29288	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11282267	11282912	-45944503	+	L2	LINE	L2	916	1640	-1779	4
chrY	11305335	11305336	chunk0212_44_1	104.086	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	11304123	11306122	-45921293	+	BSR/Beta	Satellite	Satellite	1	1999	-1	4
chrY	11309027	11309028	chunk0212_46_1	23.30894	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
chrY	11310309	11310310	chunk0212_47_1	30.7867	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
chrY	11310913	11310914	chunk0212_48_1	8.66813	AR_DHT_Control	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
chrY	11311712	11311713	chunk0212_49_1	26.1415	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
chrY	11312471	11312472	chunk0212_51_1	21.91485	AR_DHT_Control;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11308882	11314125	-45913290	+	BSR/Beta	Satellite	Satellite	1	5233	0	4
chrY	11323598	11323599	chunk0212_59_1	50.4563	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
chrY	11325852	11325853	chunk0212_61_1	52.3162	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
chrY	11328325	11328326	chunk0212_63_1	6.26019	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
chrY	11329000	11329001	chunk0212_64_1	9.60402	AR_DHT_Control	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
chrY	11329752	11329753	chunk0212_66_1	21.91021	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11323527	11331204	-45896211	+	BSR/Beta	Satellite	Satellite	1	7647	0	4
chrY	11334311	11334312	chunk0212_69_1	75.8083	SRA814800_Lncap_AR_DHT_10nm_12hr;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	11334308	11334434	-45892981	+	BSR/Beta	Satellite	Satellite	1	124	0	4
chrY	11525265	11525266	chunk0212_72_1	38.28839	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
chrY	11531879	11531880	chunk0212_76_1	68.6673	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
chrY	11534146	11534147	chunk0212_77_1	23.0237	SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
chrY	11539328	11539329	chunk0212_79_1	96.1625	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
chrY	11557128	11557129	chunk0212_81_1	73.6292	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	11555374	11592900	-45634515	+	(GAATG)n	Satellite	Satellite	1	38194	0	4
chrY	11557128	11557129	chunk0212_81_1	73.6292	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	11500536	11557169	-45670246	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	57605	0	4
chrY	11730913	11730914	chunk0212_85_1	16.5991	Merged_Lncap_AR_Veh	chrY	11721515	11749523	-45477892	+	(GAATG)n	Satellite	Satellite	1	28038	0	4
chrY	11749058	11749059	chunk0212_86_1	14.7184	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	11721515	11749523	-45477892	+	(GAATG)n	Satellite	Satellite	1	28038	0	4
chrY	12729853	12729854	chunk0212_92_1	85.5284	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	12729703	12729948	-44497467	-	L1M4c	LINE	L1	-3294	3447	3198	4
chrY	12740452	12740453	chunk0212_94_1	14.6693	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	12740173	12740534	-44486881	+	L1ME3B	LINE	L1	5539	5900	-342	4
chrY	13243268	13243269	chunk0212_97_1	7.69019	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	13243265	13243749	-43983666	+	L1MA4A	LINE	L1	6391	6862	-860	4
chrY	13486326	13486327	chunk0212_99_1	14.256	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	13484010	13489078	-43738337	-	L1PA8	LINE	L1	-681	6193	1178	4
chrY	13576407	13576408	chunk0212_100_1	15.7965	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	13575569	13576869	-43650546	+	L1PA8	LINE	L1	4928	6162	-10	4
chrY	14755248	14755249	chunk0212_102_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	14754515	14755269	-42472146	-	L1ME3B	LINE	L1	-2935	3211	2335	4
chrY	15345498	15345499	chunk0212_104_1	64.2212	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	15345350	15345522	-41881893	+	AluJo	SINE	Alu	137	306	-6	4
chrY	15379800	15379801	chunk0212_106_1	10.1162	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	15378215	15380035	-41847380	+	L1MB2	LINE	L1	3928	5894	-277	4
chrY	17418343	17418344	chunk0212_110_1	21.145	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	17417532	17418432	-39808983	+	HUERS-P1-int	LTR	ERV1	3954	4855	-1408	4
chrY	19337349	19337350	chunk0212_111_1	8.03974	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	19337248	19337500	-37889915	-	L1P3	LINE	L1	-816	5330	5043	4
chrY	19398600	19398601	chunk0212_112_1	77.7631	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	19398579	19398913	-37828502	+	L1P3	LINE	L1	2253	2593	-3553	4
chrY	19518328	19518329	chunk0213_1_1	14.611	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	19517392	19520045	-37707370	+	L1PA8	LINE	L1	3819	6486	-1	4
chrY	19544804	19544805	chunk0213_2_1	32.7646	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	19544218	19545016	-37682399	+	MER92-int	LTR	ERV1	1875	2688	-2530	4
chrY	19563555	19563556	chunk0213_3_1	8.09272	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	19563408	19563744	-37663671	-	Tigger3a	DNA	TcMar-Tigger	-4	344	1	4
chrY	19565569	19565570	chunk0213_4_1	18.5967	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	19564437	19565597	-37661818	+	L1MB5	LINE	L1	4657	5828	-346	4
chrY	19645067	19645068	chunk0213_6_1	25.3785	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	19644408	19645552	-37581863	-	L1PA6	LINE	L1	-4706	1478	305	4
chrY	20360301	20360302	chunk0213_10_1	52.1011	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	20359690	20360626	-36866789	-	L1MA3	LINE	L1	-4264	3301	2332	4
chrY	20503085	20503086	chunk0213_11_1	12.3113	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	20500002	20503115	-36724300	-	L1M1	LINE	L1	-4432	3133	10	4
chrY	20568571	20568572	chunk0213_12_1	6.10054	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	20567043	20568916	-36658499	+	L1PA10	LINE	L1	4247	6192	-1389	4
chrY	20930120	20930121	chunk0213_14_1	68.6073	SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	20929481	20935516	-36291899	+	L1PA6	LINE	L1	178	6327	0	4
chrY	21262096	21262097	chunk0213_16_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	21262093	21263167	-35964248	-	L1PA16	LINE	L1	-4466	2037	1002	4
chrY	21334504	21334505	chunk0213_17_1	43.4507	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	21334255	21334535	-35892880	-	L1M6	LINE	L1	-4680	1816	1523	4
chrY	21631159	21631160	chunk0213_18_1	7.90506	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	21631125	21631209	-35596206	+	Penelope1_Vert	LINE	Penelope	978	1061	-26	4
chrY	21642234	21642235	chunk0213_19_1	7.0516	SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	21640559	21642316	-35585099	-	L1M4c	LINE	L1	-4475	2274	390	4
chrY	26663710	26663711	chunk0213_24_1	8.75953	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	26660608	26663734	-30563681	+	(AATGG)n	Simple_repeat	Simple_repeat	3	3141	0	4
chrY	26671205	26671206	chunk0213_26_1	75.3507	Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	26670908	26671489	-30555926	+	(ATGGA)n	Simple_repeat	Simple_repeat	5	589	0	4
chrY	56728081	56728082	chunk0213_27_1	79.4428	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
chrY	56734803	56734804	chunk0213_29_1	87.0346	Merged_Lncap_AR_Veh;SRA057177_Lncap_AR_DHT_10nm_4hr;SRA814800_Lncap_AR_DHT_10nm_12hr	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
chrY	56742715	56742716	chunk0213_30_1	21.4074	SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
chrY	56763520	56763521	chunk0213_31_1	44.634	SRA057177_Lncap_AR_DHT_10nm_4hr;Merged_Lncap_AR_Veh	chrY	56673415	56771507	-455908	+	(AATGGAATGG)n	Simple_repeat	Simple_repeat	1	97964	0	4
chrY	56839420	56839421	chunk0213_32_1	69.5226	Merged_Lncap_AR_Veh;AR_DHT_Control;SRA057177_Lncap_AR_DHT_10nm_4hr	chrY	56837123	56851635	-375780	-	BSR/Beta	Satellite	Satellite	-3	14452	1	4
chrY	56846275	56846276	chunk0213_33_1	6.6659	AR_DHT_Control	chrY	56837123	56851635	-375780	-	BSR/Beta	Satellite	Satellite	-3	14452	1	4