Information for 15-AGGTCABTGACC (Motif 10)

C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C
Reverse Opposite:
C T A G C A T G C A G T T G A C G C T A T G C A C G A T T C A G G C T A G T A C G A T C G A C T
p-value:1e-255
log p-value:-5.886e+02
Information Content per bp:1.579
Number of Target Sequences with motif19692.0
Percentage of Target Sequences with motif25.53%
Number of Background Sequences with motif15663.2
Percentage of Background Sequences with motif20.43%
Average Position of motif in Targets314.7 +/- 267.5bp
Average Position of motif in Background263.0 +/- 158.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCABTGACC-
NAGGTCANTGACCT
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AGGTCABTGACC--
GAGGTCATTGACCTT
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A G T C C T G A G C A T A G C T T C A G T G C A G T A C G T A C A G C T A G C T

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AGGTCABTGACC--
AAGGTCACTGACCTT
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C C T G A A T G C A G C T T C A G T G C A G T A C G T A C A G C T G A C T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:4
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCABTGACC--
AAGGTCANTGACCTT
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C A C G T A C G T
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:5
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AGGTCABTGACC--
GAGGTCATTGACCCC
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C A C G T A C G T
T C A G T C G A C A T G C A T G A G C T A G T C T C G A C G A T A G C T T A C G T G C A G T A C G T A C A G T C A G T C

NR1H4/MA1110.1/Jaspar

Match Rank:6
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCABTGACC
NAGGTCATTGA--
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AGGTCABTGACC
TRAGGTCA------
 A C G T A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGGTCABTGACC
AGGTCA------
 C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGGTCABTGACC
AAGGTCAC-----
 A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGTCABTGACC
CGAGGTCAC-----
 A C G T A C G T C T G A C T A G C A T G C G A T A G T C G C T A A C G T C G A T A C T G G T C A G T A C G A T C
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T A C G T