Information for 16-TTGGCASV (Motif 11)

A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
Reverse Opposite:
A G C T A T G C G C A T A C T G A G T C G T A C C T G A C T G A
p-value:1e-247
log p-value:-5.688e+02
Information Content per bp:1.687
Number of Target Sequences with motif29102.0
Percentage of Target Sequences with motif37.74%
Number of Background Sequences with motif24542.0
Percentage of Background Sequences with motif32.01%
Average Position of motif in Targets329.0 +/- 269.5bp
Average Position of motif in Background263.0 +/- 161.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCASV
NTTGGCANN
 A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCASV
NNTTGGCANN
 A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCASV
CTTGGCAA-
 A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---TTGGCASV
TACTTGGCAGA
 A C G T A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCASV
GGTTGGCAT-
 A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCASV
VGCTGGCA--
 A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------TTGGCASV--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCASV
NGTGGGCAT-
 A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCASV-
TGATTGGCTANN
 A C G T A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.2/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTGGCASV
CTCATTGGCCAG
 A C G T A C G T A C G T A C G T A G C T G A C T A C T G C T A G T G A C C G T A T A C G T C G A
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G