Information for 25-CGTCTGCGTCTG (Motif 23)

A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
Reverse Opposite:
A G T C C T G A A C T G C G T A A G T C A C T G G T A C C G T A A C T G C G T A A G T C A C T G
p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.987
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.02%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets462.6 +/- 157.6bp
Average Position of motif in Background310.3 +/- 108.8bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGTCTGCGTCTG
VBSYGTCTGG-----
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGCGTCTG
CTGTCTGG-----
 A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGTCTGCGTCTG---
---NNGCTTCTGTNN
 A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTCTGCGTCTG
CAACGTCCGCGG---
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCTGCGTCTG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTCTGCGTCTG-----
--GGNGCGNCTGTTNNN
 A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGTCTGCGTCTG--
----NNCATCTGNN
 A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTGCGTCTG
TGCGTGGGCGT---
 A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGCGTCTG
TWGTCTGV-----
 A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

NHLH2/MA1529.1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CGTCTGCGTCTG
GGGCCGCAGCTGCGTCCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A G T C A C T G A C G T A G T C A G C T C T A G
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C