Information for 4-VTTDCGHAAYNN (Motif 3)

T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
Reverse Opposite:
C G T A C A G T T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T
p-value:1e-1291
log p-value:-2.975e+03
Information Content per bp:1.581
Number of Target Sequences with motif9968.0
Percentage of Target Sequences with motif12.93%
Number of Background Sequences with motif4253.4
Percentage of Background Sequences with motif5.55%
Average Position of motif in Targets296.7 +/- 242.6bp
Average Position of motif in Background261.8 +/- 160.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:VTTDCGHAAYNN---
VTTACGTAAYNNNNN
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T A C G T A C G T A C G T
T C G A A C G T A C G T C T G A G A T C T C A G G A C T G T C A C G T A A G C T G T C A C T A G A G C T A C G T T C G A

CEBPE/MA0837.1/Jaspar

Match Rank:2
Score:0.89
Offset:0
Orientation:forward strand
Alignment:VTTDCGHAAYNN
ATTGCGCAAT--
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:VTTDCGHAAYNN
ATTGCGCAAT--
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:VTTDCGHAAYNN
GTTGCGCAAT--
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:VTTDCGHAAYNN
VTTRCATAAY--
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:VTTDCGHAAYNN
-TTATGCAAT--
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:VTTDCGHAAYNN
ATTGCGCAAT--
 T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T

DBP/MA0639.1/Jaspar

Match Rank:8
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-VTTDCGHAAYNN
NGTTACGTAATN-
 A C G T T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A A C G T

CEBPD/MA0836.2/Jaspar

Match Rank:9
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-VTTDCGHAAYNN
TATTGCACAATAT
 A C G T T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

CEBPA/MA0102.4/Jaspar

Match Rank:10
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--VTTDCGHAAYNN
NNATTGTGCAATNN
 A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C A G G A T C C G T A C G T A A G C T G T C A G C A T
C G T A C G A T T C G A G C A T C A G T C T A G G A C T C T A G G T A C G T C A C G T A A G C T G T C A G C T A