Information for 14-TGGCWNNNWGCC (Motif 9)

C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C
Reverse Opposite:
C T A G A C T G G T A C G C T A A T C G T A C G A T G C C G A T A C T G A G T C A G T C G C T A
p-value:1e-264
log p-value:-6.087e+02
Information Content per bp:1.579
Number of Target Sequences with motif11033.0
Percentage of Target Sequences with motif14.31%
Number of Background Sequences with motif7899.9
Percentage of Background Sequences with motif10.30%
Average Position of motif in Targets327.4 +/- 265.6bp
Average Position of motif in Background262.3 +/- 161.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--TGGCWNNNWGCC--
CTTGGCANNNTGCCAA
 A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TGGCWNNNWGCC-
CTGGCAGNCTGCCA
 A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TGGCWNNNWGCC---
GTTGGCACGGTGCCAGG
 A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T A C G T A C G T
A T C G G C A T A C G T A C T G A C T G G T A C C T G A A G T C A T C G C A T G G A C T A C T G A G T C A G T C G T C A C T A G A T C G

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TGGCWNNNWGCC---
GTTGGCACGGTGCCAAC
 A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T A C G T A C G T
A T C G G A C T A C G T A C T G A T C G G T A C C T G A A G T C T A C G T C A G G A C T A C T G A T G C G T A C C G T A C T G A A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGGCWNNNWGCC-
TTGGCATGGTGCCA
 A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIB/MA1643.1/Jaspar

Match Rank:6
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TGGCWNNNWGCC-----
TGCCTGGCATTGTGCCAAGCA
 A C G T A C G T A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A T C C A G T A C T G C A T G T G A C G C T A A G C T C A G T T C A G C G A T A C T G A T G C A G T C G T C A C T G A T C A G G A C T G C T A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGCWNNNWGCC
NTTGGCANN-----
 A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGCWNNNWGCC
TNNGGGCAG------
 A C G T A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCWNNNWGCC
GGTTGGCAT------
 A C G T A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGCWNNNWGCC-
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A C G T C A G T A C T G C T A G G T A C G C T A T A C G A T G C T A G C C G A T C A T G A G T C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C