Information for 15-GCCAAAAYAAAC (Motif 11)

A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C
Reverse Opposite:
C T A G A G C T A C G T C A G T C T A G G A C T A G C T A G C T A G C T A C T G C T A G G T A C
p-value:1e-196
log p-value:-4.521e+02
Information Content per bp:1.738
Number of Target Sequences with motif1383.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif547.0
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets293.4 +/- 225.4bp
Average Position of motif in Background269.4 +/- 158.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAAYAAAC---
TGCCAAAATAAACANN
 A C G T A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAYAAAC
CGTGCCAAG------
 A C G T A C G T A C G T A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAYAAAC
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCAAAAYAAAC-
-GCTAARTAAACA
 A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T
A C G T A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAYAAAC--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAAAYAAAC
NNTGCCAAGNN----
 A C G T A C G T A C G T A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAYAAAC-
AGCCGAAAAAAAAAT
 A C G T A C G T A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

FOXE1/MA1487.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCAAAAYAAAC---
CCTTAAATAAACAAT
 A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T A C G T A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCCAAAAYAAAC-
----AAATAAACA
 A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXD2/MA0847.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCAAAAYAAAC--
-GTTAAGTAAACAA
 A C T G G A T C A G T C C T G A C T G A T C G A C T G A A G T C G T C A C G T A T C G A G A T C A C G T A C G T
A C G T T A C G G A C T G C A T T C G A G C T A T C A G G A C T G T C A T G C A C G T A A G T C C G T A G C T A