Information for 18-AATATTTR (Motif 16)

C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
p-value:1e-128
log p-value:-2.964e+02
Information Content per bp:1.946
Number of Target Sequences with motif3425.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif2203.6
Percentage of Background Sequences with motif3.13%
Average Position of motif in Targets314.8 +/- 242.0bp
Average Position of motif in Background261.5 +/- 162.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.84
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTR
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.84
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTR
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AATATTTR
AATAATT-
 C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATATTTR----
-ATATTTACATA
 C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AATATTTR----
-ATATTTACATA
 C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AATATTTR---
GAATGTTTGTTT
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AATATTTR----
--TRTTTACTTW
 C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1/MA0148.4/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATATTTR---
NNATGTTTACAT
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T
G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATATTTR---
--TGTTTATTT
 C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AATATTTR-
GAATATTCAT
 A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C T A G A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T