Information for 25-TGGCCAGA (Motif 21)

C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A
Reverse Opposite:
C A G T A G T C C A G T A C T G A C T G A G T C A T G C G T C A
p-value:1e-63
log p-value:-1.452e+02
Information Content per bp:1.805
Number of Target Sequences with motif10437.0
Percentage of Target Sequences with motif14.75%
Number of Background Sequences with motif8861.7
Percentage of Background Sequences with motif12.61%
Average Position of motif in Targets335.1 +/- 281.8bp
Average Position of motif in Background268.9 +/- 161.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCAGA
CYWSTGGTCARA
 A C G T A C G T A C G T A C G T C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGGCCAGA--
TGCCCAGNHW
 C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A A C G T A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGGCCAGA
CTCATTGGCCAG-
 A C G T A C G T A C G T A C G T A C G T C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGCCAGA--
ATGCCAGACN
 C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A A C G T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Plagl1/MA1615.1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TGGCCAGA
CCCTGGGGCCAGG
 A C G T A C G T A C G T A C G T A C G T C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGCCAGA
CGTGCCAAG
 A C G T C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCAGA
TGATTGGCTANN
 A C G T A C G T A C G T A C G T C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGGCCAGA---
---CCAGACAG
 C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGGCCAGA-----
---CCAGACRSVB
 C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGCCAGA-------
CAAATCCAGACATCACA
 A C G T A C G T C A G T A T C G T C A G G T A C A G T C G C T A T C A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A