Information for 25-CGTCTGCGTCTG (Motif 22)

A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G C G T A A G T C A T C G A G T C C G T A A T C G C G T A A G T C A C T G
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.971
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets465.3 +/- 220.9bp
Average Position of motif in Background121.9 +/- 79.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.65
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGTCTGCGTCTG
VBSYGTCTGG-----
 A C G T A C G T A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGCGTCTG
CTGTCTGG-----
 A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGTCTGCGTCTG---
---NNGCTTCTGTNN
 A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCTGCGTCTG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGTCTGCGTCTG
CAACGTCCGCGG---
 A C G T A C G T A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTCTGCGTCTG-----
--GGNGCGNCTGTTNNN
 A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTGCGTCTG
NNCATCTGNN----
 A C G T A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGCGTCTG
TWGTCTGV-----
 A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGTCTGCGTCTG----
------GGTCTGGCAT
 A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTGCGTCTG
TGCGTGGGCGT---
 A C G T A C G T A G T C A C T G A C G T A T G C A C G T A C T G A T G C A C T G A C G T A G T C A C G T A C T G
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T