Information for 10-TRGRCAMATG (Motif 12)

C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G
Reverse Opposite:
G A T C G T C A A C G T A C G T A C G T A T C G A G T C G A T C G A T C C G T A
p-value:1e-2909
log p-value:-6.699e+03
Information Content per bp:1.621
Number of Target Sequences with motif40423.0
Percentage of Target Sequences with motif62.61%
Number of Background Sequences with motif101321.7
Percentage of Background Sequences with motif37.46%
Average Position of motif in Targets264.6 +/- 189.2bp
Average Position of motif in Background247.1 +/- 245.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TRGRCAMATG--
--GACACATGGC
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T A C G T
A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

twi/MA0249.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TRGRCAMATG--
-ATACACATGTA
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T A C G T
A C G T C T G A G A C T G T C A A G T C G T C A A G T C T C G A A G C T T C A G A C G T C T G A

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TRGRCAMATG
TTAGAGACAGG
 A C G T C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G
C G A T A C G T T C G A C T A G G T C A C A T G C G T A G A T C G C T A A C T G C T A G

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TRGRCAMATG-
----AAAATGN
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G G C A T

CST6(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TRGRCAMATG--
----NAAATGCA
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C G A C T G A C G T A A C G T C A T G T A G C T C G A

twi/dmmpmm(Down)/fly

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TRGRCAMATG-
--AACATATGT
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T
A C G T A C G T G T C A C T G A A T G C G T C A G A C T C T G A A C G T C A T G G A C T

twi/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TRGRCAMATG-
----CACATGT
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T C T A G A G C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TRGRCAMATG---
GGAACAGATGGCA
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T A C G T A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

Tal1

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TRGRCAMATG
----CAGATG
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G

HAND2/MA1638.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TRGRCAMATG--
--ACCAGATGGC
 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G A C G T A C G T
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C