Information for 13-AAGGAAVT (Motif 16)

G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
Reverse Opposite:
C G T A A T C G G A C T A C G T A G T C A G T C G A C T C G A T
p-value:1e-1907
log p-value:-4.392e+03
Information Content per bp:1.721
Number of Target Sequences with motif43126.0
Percentage of Target Sequences with motif66.80%
Number of Background Sequences with motif125651.1
Percentage of Background Sequences with motif46.46%
Average Position of motif in Targets264.7 +/- 191.2bp
Average Position of motif in Background244.9 +/- 247.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AAGGAAVT
GAAGGAA--
 A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
C T A G C G T A C T G A A C T G A C T G C G T A C T G A A C G T A C G T

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AAGGAAVT
CAGGAAGT
 G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
G T A C G T C A C T A G A T C G C G T A C G T A C A T G G A C T

Eip74EF/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AAGGAAVT--
-AGGAAGTAT
 G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T A C G T A C G T
A C G T G T C A C T A G A C T G C G T A C G T A A C T G G C A T C G T A G A C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAVT
ANCAGGAAGT
 A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Eip74EF/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAVT
AACAGGAAGT
 A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
G C T A G C T A G T A C G T C A C T A G A T C G C G T A C G T A C A T G G A C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAVT
AVCAGGAAGT
 A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

ELF3/MA0640.2/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAAVT----
ANCAGGAAGTGGNN
 A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T A C G T A C G T A C G T A C G T
C G T A T A G C T A G C T G C A T C A G C T A G T G C A C T G A T C A G G C A T C T A G T C A G T C G A C T G A

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AAGGAAVT--
AACAAGGAAGTAA
 A C G T A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T A C G T A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A

RME1(MacIsaac)/Yeast

Match Rank:9
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AAGGAAVT
TCCAAAGGAA--
 A C G T A C G T A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
A G C T A G T C A G T C C T G A C T G A G T C A C T A G C T A G T G C A C T G A A C G T A C G T

AZF1/MA0277.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAVT
AAAAAGAAA-
 A C G T A C G T G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T
C G T A C G T A C G T A G T C A C T G A A C T G G T C A C G T A C G T A A C G T