Information for 15-CTSAGSTS (Motif 17)

A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G
Reverse Opposite:
A T G C C T G A T A C G A T G C A C G T A T G C C G T A A C T G
p-value:1e-1808
log p-value:-4.165e+03
Information Content per bp:1.688
Number of Target Sequences with motif14923.0
Percentage of Target Sequences with motif23.12%
Number of Background Sequences with motif24884.5
Percentage of Background Sequences with motif9.20%
Average Position of motif in Targets260.6 +/- 203.8bp
Average Position of motif in Background239.4 +/- 247.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PL0013.1_hlh-2::hlh-15/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CTSAGSTS----
AGGGCCCAGCTGNTNN
 A C G T A C G T A C G T A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G A C G T A C G T A C G T A C G T
T G C A A C T G C A T G T A C G G T A C T A G C T G A C C G T A A T C G T A G C C G A T C A T G A T C G A C G T A G T C G A T C

TGA1a(bZIP)/Nicotiana tabacum/AthaMap

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTSAGSTS--
CTCACGTGNG
 A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G A C G T A C G T
A T G C G C A T A T G C C G T A A G T C A C T G A C G T A T C G C G T A A T C G

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTSAGSTS--
CGCAGCTGCG
 A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G A C G T A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTSAGSTS
CGCGCTGAGCN-
 A C G T A C G T A C G T A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G
A T G C T A C G A G T C A T C G G T A C C G A T C T A G C G T A T A C G A T G C A G T C A C G T

CDC5/MA0579.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTSAGSTS
CGCGCTGAGCN-
 A C G T A C G T A C G T A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G
A T G C T A C G A G T C A T C G G T A C C G A T C T A G C G T A T A C G A T G C A G T C A C G T

MET4/MA0335.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTSAGSTS
CCACAGTT-
 A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G
A G T C A G T C C G T A A G T C C G T A C T A G A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTSAGSTS-
NAHCAGCTGD
 A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G A C G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

MET4(MacIsaac)/Yeast

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTSAGSTS
CCACAGTT-
 A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G
A G T C A G T C C G T A A G T C C G T A C T A G A G C T A C G T A C G T

bZIP43/MA1339.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTSAGSTS--
TGCTGACGTGGC
 A C G T A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G A C G T A C G T
C G A T A C T G G T A C C G A T A T C G C G T A A G T C C T A G A C G T A C T G A C T G G T A C

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTSAGSTS---
GCACAGCTGTGC
 A C G T A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G A C G T A C G T A C G T
T C A G T G A C T C G A T G A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C