Information for 20-CAGCAAATATTG (Motif 27)

A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C T G A G T C A C G T T C A G
p-value:1e-148
log p-value:-3.420e+02
Information Content per bp:1.979
Number of Target Sequences with motif377.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif150.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets288.0 +/- 156.1bp
Average Position of motif in Background324.7 +/- 150.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CAGCAAATATTG-----
---CTAATATTGCTAAA
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CAGCAAATATTG-----
---CTAATATTGCTAAA
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

cad/dmmpmm(Down)/fly

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CAGCAAATATTG
----AAAAATTT
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G
A C G T A C G T A C G T A C G T C T G A G T C A C T G A C G T A C T G A G A C T A C G T A C G T

ATHB1(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CAGCAAATATTG
---CAATTATTG
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G
A C G T A C G T A C G T A T G C G C T A C G T A A C G T A G C T C G T A A C G T A C G T T C A G

ZHD3/MA1213.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGCAAATATTG-
ACACCAATAATTGG
 A C G T A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G A C G T
C T G A T G A C C G T A G T A C G A T C C G T A C G T A A C G T G C T A C G T A A C G T C G A T C A T G C T A G

ATHB53/MA1215.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAGCAAATATTG-
--TCAATTATTGG
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G A C G T
A C G T A C G T G C A T G A T C G C T A C G T A A C G T G C A T C G T A A C G T A C G T C A T G C A T G

slp1/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAGCAAATATTG
-TGTAAATATT-
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G
A C G T C G A T C T A G G A C T G T C A C T G A C G T A A G C T C G T A C G A T C G A T A C G T

HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CAGCAAATATTG-
---CAATWATTGH
 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G A C G T
A C G T A C G T A C G T A G T C C G T A C G T A A G C T G C T A T C G A A C G T C A G T T C A G G C T A

ATHB5(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGCAAATATTG
GGTCCAATTATTG
 A C G T A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G
A C T G A T C G A G C T A T G C A T G C G T C A C G T A A C G T A G C T C G T A A C G T A C G T A C T G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAAATATTG
NACAGGAAAT----
 A C G T A C G T A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T