Information for 2-SCWGSCWG (Motif 3)

T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
Reverse Opposite:
T A G C C G A T A C T G A T G C A G T C C G A T A T C G A T C G
p-value:1e-5188
log p-value:-1.195e+04
Information Content per bp:1.641
Number of Target Sequences with motif34556.0
Percentage of Target Sequences with motif53.53%
Number of Background Sequences with motif59049.2
Percentage of Background Sequences with motif21.83%
Average Position of motif in Targets255.5 +/- 189.6bp
Average Position of motif in Background232.9 +/- 244.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.98
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-SCWGSCWG
VGCTGGCA-
 A C G T T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:SCWGSCWG
CTTGGCAA
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

CRZ1(MacIsaac)/Yeast

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:SCWGSCWG
-CAGCCAC
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
A C G T A G T C C G T A A C T G A G T C A G T C C G A T A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:SCWGSCWG-
NTTGGCANN
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

SOK2(MacIsaac)/Yeast

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:SCWGSCWG
GCAGGCAA
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
C T A G G A T C C T G A A T C G A C T G T G A C T C G A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SCWGSCWG
BCAGACWA
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Tag/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:SCWGSCWG
-CAGGTAG
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
A C G T A G T C C G T A A C T G A T C G A G C T C G T A C T A G

SWI5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:SCWGSCWG
CCAGCA--
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
A G C T A G T C C G T A A C T G A G T C G T A C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:SCWGSCWG
CCAGACAG
 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---SCWGSCWG
HNAGCTGKCM-
 A C G T A C G T A C G T T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G
G A C T A G T C C T G A C A T G A G T C A C G T C A T G A C G T G T A C G T C A A C G T