Information for 7-AAAATGTT (Motif 4)

C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T
Reverse Opposite:
C G T A C G T A A T G C C G T A C A G T A C G T A C G T A C G T
p-value:1e0
log p-value:-0.000e+00
Information Content per bp:1.826
Number of Target Sequences with motif5037.0
Percentage of Target Sequences with motif7.81%
Number of Background Sequences with motif406.0
Percentage of Background Sequences with motif87.55%
Average Position of motif in Targets270.7 +/- 188.1bp
Average Position of motif in Background3451515.2 +/- 4232642.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAAATGTT
AAAATGN-
 C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T
C G T A C G T A C G T A C G T A A C G T A C T G G C A T A C G T

ROX8(RRM)/Drosophila_melanogaster-RNCMPT00148-PBM/HughesRNA

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AAAATGTT
AAAATGG-
 C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T
C G T A C G T A C G T A C T G A C G A T C T A G A C T G A C G T

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGTT
AAAAAAG--
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T
G T C A C G T A C G T A C G T A C G T A C G T A C T A G A C G T A C G T

At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AAAATGTT
AAAAAGTG
 C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T
C G T A C G T A C G T A C G T A C T G A A C T G A G C T C T A G

OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGTT---
VAAAAAGTDAAW
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T A C G T A C G T A C G T
T G C A C T G A C G T A C G T A C G T A C T G A A C T G A C G T C G T A C G T A G C T A G C T A

BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTT-
NAAAAAGTDA
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T A C G T
T C G A C T G A C G T A C G T A C G T A C G T A A C T G A C G T C G A T C T G A

SFP1/SacCer-Promoters/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGTT---
RAAAATTTTTHH
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T A C G T A C G T A C G T
C T A G T C G A G T C A C G T A G C T A C G A T C A G T A C G T A C G T A G C T G A T C G T C A

AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGTT-
BAAAAAGTKA
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T A C G T
A T G C C T G A C G T A C G T A C G T A C G T A A C T G A C G T C A G T T C G A

Syncrip(RRM)/Xenopus_tropicalis-RNCMPT00281-PBM/HughesRNA

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTT
CAAAAAG--
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T
G T A C G T C A C G T A C G T A C G T A C G T A C A T G A C G T A C G T

AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTT-
VAAAAAGTWA
 A C G T C G T A C G T A C G T A G T C A C G A T A T C G C G A T C G A T A C G T
T A C G T C G A C G T A C G T A C G T A C T G A A C T G A C G T C G T A T C G A