Information for 1-CWSHNNKCCCWG (Motif 1)

A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G C T A G T C A G T G A C G T C A G T A C C T G A T A G C C G T A T A C G
p-value:1e-5612
log p-value:-1.292e+04
Information Content per bp:1.547
Number of Target Sequences with motif41121.0
Percentage of Target Sequences with motif63.70%
Number of Background Sequences with motif79068.4
Percentage of Background Sequences with motif29.27%
Average Position of motif in Targets258.7 +/- 190.9bp
Average Position of motif in Background235.6 +/- 241.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.87
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:CWSHNNKCCCWG---
-----TGCCCAGNHW
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CWSHNNKCCCWG-
-------CACAGN
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

SAMD4A(SAM)/Homo_sapiens-RNCMPT00063-PBM/HughesRNA

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CWSHNNKCCCWG-
------GNCCAGC
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A G T C A G T C G T C A A C T G A G T C

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CWSHNNKCCCWG--
--------CCAGCA
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G A G T C G T A C

RLR1(MacIsaac)/Yeast

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CWSHNNKCCCWG--
ACAGTTCTTTCAGGA
 A C G T A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T
C G T A A G T C C G T A A C T G A C G T G C A T G A T C A C G T G A C T G C A T G A T C C G T A A C T G C A T G C G A T

REI1/MA0364.1/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CWSHNNKCCCWG-
------CCCCTGA
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G T C A C G T A C T G C T G A

ACE2/MA0267.1/Jaspar

Match Rank:7
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CWSHNNKCCCWG--
-------ACCAGCA
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A T G C A G T C G T C A A C T G A G T C T G C A

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00082-PBM/HughesRNA

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CWSHNNKCCCWG--
------GGCCAGCN
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G A G T C A G T C C G T A A C T G A G T C T C G A

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWSHNNKCCCWG-----
-----GNNTCAGGTGAN
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C A G C T A G T C C G T A A C T G T C A G G C A T C A T G C T G A C G A T

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWSHNNKCCCWG-----
-----GNNTCAGGTGAN
 A T G C C G A T A T C G G A C T C A T G C A G T A C T G A G T C G A T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C A G C T A G T C C G T A A C T G T C A G G C A T C A T G C T G A C G A T