Information for 14-CACMAAGG (Motif 13)

A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
Reverse Opposite:
T G A C G T A C G C A T C A G T A C G T A T C G C G A T A C T G
p-value:1e-2429
log p-value:-5.594e+03
Information Content per bp:1.646
Number of Target Sequences with motif42255.0
Percentage of Target Sequences with motif65.45%
Number of Background Sequences with motif114611.8
Percentage of Background Sequences with motif42.42%
Average Position of motif in Targets260.9 +/- 193.1bp
Average Position of motif in Background242.3 +/- 241.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CACMAAGG---
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

MATA1(MacIsaac)/Yeast

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACMAAGG
ACACAAT--
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
C T A G A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T

HMRA1/MA0327.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACMAAGG
ACACAAT--
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
C T A G A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T

RBM38(RRM)/Mus_musculus-RNCMPT00051-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACMAAGG
CACACAC---
 A C G T A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
G T A C T G C A A G T C G T C A A G T C G T C A G T A C A C G T A C G T A C G T

CG7804(RRM)/Drosophila_melanogaster-RNCMPT00146-PBM/HughesRNA

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACMAAGG
CCACACT--
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
A G T C G T A C C G T A A G T C G T C A G T A C C G A T A C G T A C G T

AGL55/MA1202.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACMAAGG
TCACCA---
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
A G C T A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACMAAGG
AACACACA--
 A C G T A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
G T C A G T C A G T A C C G T A G T A C G T C A G T A C C G T A A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00003-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACMAAGG
ACACACA--
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
G T C A G T A C C G T A G T A C G T C A G T A C C G T A A C G T A C G T

SUP-12(RRM)/Caenorhabditis_elegans-RNCMPT00179-PBM/HughesRNA

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACMAAGG
TCACACA--
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
G C A T A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T

ETR-1(RRM)/Caenorhabditis_elegans-RNCMPT00183-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACMAAGG
ACACAAA--
 A C G T A G T C G C T A T A G C G T C A G T C A C G T A A C T G A C T G
C G T A A G T C C G T A G T A C G T C A G T C A G T C A A C G T A C G T