Information for 17-CACACACA (Motif 15)

A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-1480
log p-value:-3.410e+03
Information Content per bp:1.530
Number of Target Sequences with motif27326.0
Percentage of Target Sequences with motif42.33%
Number of Background Sequences with motif68930.6
Percentage of Background Sequences with motif25.52%
Average Position of motif in Targets253.0 +/- 186.6bp
Average Position of motif in Background231.4 +/- 257.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CACACACA
AACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
G T C A G T C A G T A C C G T A G T A C G T C A G T A C C G T A

BRUNOL5(RRM)/Homo_sapiens-RNCMPT00166-PBM/HughesRNA

Match Rank:2
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T G T C A G T A C G T C A G T A C C G T A G T A C C G T A

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:3
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T G T C A G T A C C G T A G T A C C G T A G T A C G T C A

ARET(RRM)/Drosophila_melanogaster-RNCMPT00270-PBM/HughesRNA

Match Rank:4
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T C G T A G T A C C G T A G A T C C G T A G T A C C G T A

SM(RRM)/Drosophila_melanogaster-RNCMPT00069-PBM/HughesRNA

Match Rank:5
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T C G T A A T G C C G T A A G T C C T G A T G A C T G C A

ARET(RRM)/Drosophila_melanogaster-RNCMPT00003-PBM/HughesRNA

Match Rank:6
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T G T C A G T A C C G T A G T A C G T C A G T A C C G T A

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:7
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T G T C A G T A C C G T A G A T C C G T A G T A C G T C A

Rbm38(RRM)/Danio_rerio-RNCMPT00283-PBM/HughesRNA

Match Rank:8
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CACACACA
CACACAC-
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
G A T C G T C A G T A C C G T A A G T C C G T A G T A C A C G T

SeqBias: CA-repeat

Match Rank:9
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CACACACA--
CACACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T
G T A C G T C A G T A C G T C A G T A C G T C A G T A C G T C A G T A C G T C A

HNRPLL(RRM)/Homo_sapiens-RNCMPT00178-PBM/HughesRNA

Match Rank:10
Score:0.89
Offset:1
Orientation:forward strand
Alignment:CACACACA
-ACACACA
 A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T C T G A A G T C C G T A G A T C C T G A A G T C C G T A