Information for 21-CTCGCTCTGT (Motif 24)

A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A A C T G A G T C A C T G C G T A A C T G
p-value:1e-126
log p-value:-2.920e+02
Information Content per bp:1.530
Number of Target Sequences with motif321.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif127.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets245.6 +/- 214.7bp
Average Position of motif in Background219.3 +/- 232.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Clamp/MA1700.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CTCGCTCTGT-
TCTCTCGCTCGCTC
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
A G C T T A G C C A G T A G T C A G C T A G T C A C T G G A T C G C A T A G T C A C T G A G T C C G A T A G T C

Trl/MA0205.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTCGCTCTGT-
TCTCTCTCTTNN
 A C G T A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C

Trl/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCGCTCTGT-
-TTGCTCTCTC
 A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A G C T A G C T C A T G A G T C C A G T G T A C C G A T A T G C A G C T A G T C

REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTCGCTCTGT--
--TVCTCTGTTT
 A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C A G C T A G T C A G C T A C T G G A C T A G C T G A C T

REF6/MA1415.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTCGCTCTGT---
--TNCTCTGTTTT
 A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C A G G T A C G A C T T G A C A G C T C T A G A G C T C G A T G A C T G A C T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTCGCTCTGT
CTCTCTCY--
 A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A G T C A G C T A G T C A C G T A G T C A G C T A G T C G A T C A C G T A C G T

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCGCTCTGT
CTCTCTCTCY
 A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T
A T G C G C A T T A G C C G A T T A G C G C A T T A G C G C A T A T G C G A C T

CNOT4(RRM)/Homo_sapiens-RNCMPT00156-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTCGCTCTGT-
----NTCTGTC
 A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T A T G C A C G T A T C G A C G T A T G C

RAMOSA1/MA1416.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTCGCTCTGT-
TCTCTCTCTCTCTC
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
G A C T G A T C A G C T T G A C C A G T T G A C C A G T T G A C C A G T T G A C A G C T G A T C A G C T G A T C

BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTCGCTCTGT-
YTYTCTCTCTCTCTA
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T
G A T C G A C T G A C T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T G T A C C G A T G T C A