Information for 9-CTGCYCCH (Motif 9)

A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
Reverse Opposite:
C T A G C T A G C T A G T C G A T C A G A G T C C G T A A C T G
p-value:1e-3428
log p-value:-7.895e+03
Information Content per bp:1.687
Number of Target Sequences with motif40118.0
Percentage of Target Sequences with motif62.14%
Number of Background Sequences with motif94350.8
Percentage of Background Sequences with motif34.92%
Average Position of motif in Targets260.0 +/- 194.8bp
Average Position of motif in Background239.1 +/- 249.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

grh/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTGCYCCH
TACCTGCT---
 A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
C A G T C G T A A G T C A G T C A C G T A C T G A T G C A G C T A C G T A C G T A C G T

CRZ1(MacIsaac)/Yeast

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTGCYCCH
CAGCCAC-
 A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
A G T C C G T A A C T G A G T C A G T C C G A T A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTGCYCCH
GCTGTG---
 A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTGCYCCH
TNCCTGCA---
 A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
A G C T A C G T A T G C T G A C A G C T A C T G G A T C T C G A A C G T A C G T A C G T

SWI5/Literature(Harbison)/Yeast

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGCYCCH
CCAGCA---
 A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
A G C T A G T C C G T A A C T G A G T C G T A C A C G T A C G T A C G T

SAMD4A(SAM)/Homo_sapiens-RNCMPT00063-PBM/HughesRNA

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGCYCCH
GNCCAGC----
 A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
A C T G C A G T A G T C A G T C G T C A A C T G A G T C A C G T A C G T A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTGCYCCH
CAGCACCTGCCCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00082-PBM/HughesRNA

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGCYCCH
GGCCAGCN---
 A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
A T C G C T A G A G T C A G T C C G T A A C T G A G T C T C G A A C G T A C G T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGCYCCH-
GTCTGTTTCTA
 A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

ACE2/MA0267.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGCYCCH
ACCAGCA---
 A C G T A C G T A G T C C G A T A C T G A G T C A G C T A G T C A G T C G A T C
T G C A A T G C A G T C G T C A A C T G A G T C T G C A A C G T A C G T A C G T