Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 64564)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 270127)	% of Background Sequences with Motif
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-6637	-1.528e+04	0.0000	37731.0	58.44%	59941.1	22.19%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-6581	-1.515e+04	0.0000	37717.0	58.42%	60250.0	22.30%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-6473	-1.490e+04	0.0000	40857.0	63.29%	71892.2	26.61%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-6163	-1.419e+04	0.0000	30778.0	47.67%	41224.9	15.26%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-4976	-1.146e+04	0.0000	30608.0	47.41%	47818.3	17.70%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-4903	-1.129e+04	0.0000	39439.0	61.09%	78314.4	28.99%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-4588	-1.057e+04	0.0000	11596.0	17.96%	5175.4	1.92%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e-4277	-9.849e+03	0.0000	9673.0	14.98%	3261.6	1.21%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e-3831	-8.823e+03	0.0000	12151.0	18.82%	8108.8	3.00%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-3830	-8.820e+03	0.0000	18217.0	28.22%	20735.8	7.68%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e-3591	-8.270e+03	0.0000	12800.0	19.83%	10103.1	3.74%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-3560	-8.199e+03	0.0000	45392.0	70.31%	114978.8	42.56%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e-3346	-7.706e+03	0.0000	26569.0	41.15%	46986.3	17.39%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e-3320	-7.647e+03	0.0000	8296.0	12.85%	3459.3	1.28%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e-3206	-7.382e+03	0.0000	52837.0	81.84%	154221.0	57.09%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-2970	-6.841e+03	0.0000	25664.0	39.75%	47210.1	17.48%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-2800	-6.449e+03	0.0000	29319.0	45.41%	60781.4	22.50%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-2660	-6.126e+03	0.0000	34178.0	52.94%	79626.3	29.47%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-2637	-6.072e+03	0.0000	30739.0	47.61%	67366.3	24.94%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-2442	-5.624e+03	0.0000	41846.0	64.82%	112712.1	41.72%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-2401	-5.530e+03	0.0000	15208.0	23.56%	21351.7	7.90%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-2369	-5.457e+03	0.0000	25311.0	39.21%	51532.0	19.07%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-2339	-5.387e+03	0.0000	31076.0	48.14%	71797.7	26.58%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e-2100	-4.836e+03	0.0000	46122.0	71.44%	136022.1	50.35%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-2098	-4.832e+03	0.0000	17402.0	26.96%	29544.4	10.94%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-2087	-4.807e+03	0.0000	7209.0	11.17%	5161.0	1.91%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-2068	-4.762e+03	0.0000	20048.0	31.05%	37664.8	13.94%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-1843	-4.246e+03	0.0000	18730.0	29.01%	35717.4	13.22%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-1834	-4.225e+03	0.0000	27050.0	41.90%	63319.3	23.44%
SeqBias: GA-repeat	GAGAGAGAGA	1e-1824	-4.202e+03	0.0000	54368.0	84.21%	180171.9	66.69%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e-1733	-3.992e+03	0.0000	14448.0	22.38%	24126.7	8.93%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1722	-3.965e+03	0.0000	6289.0	9.74%	4809.8	1.78%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-1678	-3.865e+03	0.0000	19533.0	30.26%	39868.9	14.76%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-1676	-3.860e+03	0.0000	15168.0	23.49%	26651.4	9.87%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1670	-3.846e+03	0.0000	19758.0	30.60%	40667.1	15.05%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e-1639	-3.776e+03	0.0000	5501.0	8.52%	3719.1	1.38%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e-1603	-3.691e+03	0.0000	14196.0	21.99%	24500.5	9.07%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-1593	-3.669e+03	0.0000	15837.0	24.53%	29353.4	10.87%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1481	-3.411e+03	0.0000	22623.0	35.04%	52320.0	19.37%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1415	-3.260e+03	0.0000	13203.0	20.45%	23299.8	8.62%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e-1401	-3.227e+03	0.0000	22624.0	35.04%	53343.1	19.75%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1387	-3.196e+03	0.0000	9697.0	15.02%	14037.8	5.20%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1341	-3.090e+03	0.0000	17465.0	27.05%	36953.8	13.68%
SeqBias: CA-repeat	CACACACACA	1e-1274	-2.935e+03	0.0000	51600.0	79.93%	174938.4	64.75%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1266	-2.917e+03	0.0000	8985.0	13.92%	13081.0	4.84%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e-1199	-2.762e+03	0.0000	14896.0	23.07%	30477.9	11.28%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-1192	-2.746e+03	0.0000	17659.0	27.35%	39347.2	14.56%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e-1162	-2.678e+03	0.0000	19835.0	30.72%	46985.7	17.39%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1150	-2.650e+03	0.0000	10391.0	16.10%	17715.2	6.56%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-1145	-2.637e+03	0.0000	16326.0	25.29%	35610.6	13.18%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e-1133	-2.610e+03	0.0000	49870.0	77.25%	169139.2	62.61%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1129	-2.601e+03	0.0000	18172.0	28.15%	41839.3	15.49%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e-1109	-2.556e+03	0.0000	16065.0	24.88%	35202.8	13.03%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e-1109	-2.554e+03	0.0000	17835.0	27.63%	40992.6	15.17%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e-1106	-2.549e+03	0.0000	11345.0	17.57%	20805.9	7.70%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e-1093	-2.518e+03	0.0000	12136.0	18.80%	23244.8	8.60%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1090	-2.512e+03	0.0000	10721.0	16.61%	19171.1	7.10%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e-1086	-2.501e+03	0.0000	28921.0	44.80%	81030.2	29.99%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1068	-2.461e+03	0.0000	18578.0	28.78%	44019.4	16.29%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e-1046	-2.410e+03	0.0000	12177.0	18.86%	23849.2	8.83%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-1043	-2.402e+03	0.0000	6097.0	9.44%	7534.8	2.79%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-1040	-2.397e+03	0.0000	11348.0	17.58%	21458.7	7.94%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1029	-2.371e+03	0.0000	25094.0	38.87%	67647.0	25.04%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1025	-2.361e+03	0.0000	15135.0	23.44%	33259.8	12.31%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-1018	-2.346e+03	0.0000	7390.0	11.45%	10810.7	4.00%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-1016	-2.340e+03	0.0000	11669.0	18.07%	22653.4	8.39%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-996	-2.295e+03	0.0000	15495.0	24.00%	34780.8	12.87%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e-987	-2.275e+03	0.0000	3160.0	4.89%	1946.5	0.72%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e-978	-2.253e+03	0.0000	17238.0	26.70%	40771.5	15.09%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-959	-2.209e+03	0.0000	11981.0	18.56%	24200.6	8.96%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-942	-2.170e+03	0.0000	3115.0	4.83%	2016.0	0.75%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-927	-2.136e+03	0.0000	11069.0	17.15%	21804.9	8.07%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e-903	-2.080e+03	0.0000	9155.0	14.18%	16489.5	6.10%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-885	-2.038e+03	0.0000	5259.0	8.15%	6549.9	2.42%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-883	-2.035e+03	0.0000	39805.0	61.66%	129018.5	47.76%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e-870	-2.004e+03	0.0000	33701.0	52.20%	103958.9	38.48%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-866	-1.996e+03	0.0000	10876.0	16.85%	21889.3	8.10%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-859	-1.978e+03	0.0000	19730.0	30.56%	51147.7	18.93%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-841	-1.937e+03	0.0000	8824.0	13.67%	16147.2	5.98%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-839	-1.933e+03	0.0000	9233.0	14.30%	17334.0	6.42%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e-835	-1.924e+03	0.0000	26059.0	40.36%	74737.9	27.66%
Tal1	CATCTG	1e-790	-1.819e+03	0.0000	17485.0	27.08%	44434.3	16.45%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e-772	-1.778e+03	0.0000	9244.0	14.32%	18066.9	6.69%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-771	-1.776e+03	0.0000	7287.0	11.29%	12514.7	4.63%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-766	-1.765e+03	0.0000	11392.0	17.65%	24651.8	9.13%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-761	-1.754e+03	0.0000	10190.0	15.78%	21009.9	7.78%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-759	-1.748e+03	0.0000	9949.0	15.41%	20308.7	7.52%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e-751	-1.730e+03	0.0000	8801.0	13.63%	16989.4	6.29%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-743	-1.711e+03	0.0000	9373.0	14.52%	18763.5	6.95%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e-736	-1.696e+03	0.0000	12248.0	18.97%	27752.0	10.27%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e-724	-1.668e+03	0.0000	19992.0	30.97%	54425.4	20.15%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-721	-1.662e+03	0.0000	12865.0	19.93%	29948.7	11.09%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e-718	-1.653e+03	0.0000	38410.0	59.50%	126829.6	46.95%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e-716	-1.650e+03	0.0000	3458.0	5.36%	3534.7	1.31%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-714	-1.646e+03	0.0000	6719.0	10.41%	11469.6	4.25%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e-704	-1.622e+03	0.0000	8606.0	13.33%	16922.6	6.26%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-677	-1.559e+03	0.0000	24849.0	38.49%	73357.7	27.15%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e-648	-1.493e+03	0.0000	9378.0	14.53%	19890.5	7.36%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-642	-1.480e+03	0.0000	14076.0	21.80%	35166.1	13.02%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e-635	-1.462e+03	0.0000	32577.0	50.46%	104697.4	38.75%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-628	-1.447e+03	0.0000	7121.0	11.03%	13418.7	4.97%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-621	-1.432e+03	0.0000	3657.0	5.66%	4469.2	1.65%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e-612	-1.411e+03	0.0000	5852.0	9.06%	10029.0	3.71%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e-609	-1.403e+03	0.0000	10375.0	16.07%	23509.3	8.70%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e-608	-1.402e+03	0.0000	12955.0	20.07%	31937.2	11.82%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e-607	-1.398e+03	0.0000	27105.0	41.98%	83609.1	30.95%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e-594	-1.368e+03	0.0000	18579.0	28.78%	51823.5	19.18%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e-590	-1.360e+03	0.0000	49177.0	76.17%	177581.1	65.73%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e-575	-1.325e+03	0.0000	15153.0	23.47%	40015.9	14.81%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-574	-1.324e+03	0.0000	7530.0	11.66%	15190.9	5.62%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-574	-1.322e+03	0.0000	38845.0	60.17%	132288.3	48.97%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-569	-1.311e+03	0.0000	16528.0	25.60%	44962.3	16.64%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-561	-1.294e+03	0.0000	6367.0	9.86%	11951.5	4.42%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-552	-1.272e+03	0.0000	13699.0	21.22%	35406.3	13.11%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-540	-1.245e+03	0.0000	11020.0	17.07%	26600.5	9.85%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-538	-1.240e+03	0.0000	5813.0	9.00%	10624.5	3.93%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e-536	-1.236e+03	0.0000	52245.0	80.93%	193369.2	71.58%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e-535	-1.233e+03	0.0000	22947.0	35.54%	69298.4	25.65%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e-531	-1.225e+03	0.0000	17970.0	27.84%	50889.2	18.84%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-529	-1.219e+03	0.0000	30893.0	47.85%	100579.2	37.23%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e-527	-1.214e+03	0.0000	7725.0	11.97%	16342.9	6.05%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-522	-1.203e+03	0.0000	11873.0	18.39%	29728.6	11.00%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-520	-1.198e+03	0.0000	5447.0	8.44%	9783.4	3.62%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-513	-1.183e+03	0.0000	5559.0	8.61%	10160.3	3.76%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-511	-1.177e+03	0.0000	6819.0	10.56%	13817.9	5.11%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-509	-1.173e+03	0.0000	15262.0	23.64%	41649.8	15.42%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-499	-1.151e+03	0.0000	32016.0	49.59%	105927.5	39.21%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-499	-1.150e+03	0.0000	5656.0	8.76%	10576.6	3.92%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e-497	-1.144e+03	0.0000	4052.0	6.28%	6269.6	2.32%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-489	-1.127e+03	0.0000	18728.0	29.01%	54584.5	20.20%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-487	-1.122e+03	0.0000	36990.0	57.30%	126854.7	46.96%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e-479	-1.104e+03	0.0000	5338.0	8.27%	9885.5	3.66%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-477	-1.099e+03	0.0000	9439.0	14.62%	22423.1	8.30%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e-470	-1.083e+03	0.0000	5501.0	8.52%	10439.0	3.86%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-467	-1.076e+03	0.0000	4345.0	6.73%	7279.2	2.69%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e-466	-1.075e+03	0.0000	14097.0	21.84%	38385.0	14.21%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-463	-1.068e+03	0.0000	12409.0	19.22%	32573.9	12.06%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-460	-1.061e+03	0.0000	7987.0	12.37%	18030.3	6.67%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-456	-1.052e+03	0.0000	11771.0	18.23%	30520.3	11.30%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-454	-1.046e+03	0.0000	34505.0	53.45%	117450.7	43.48%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-439	-1.013e+03	0.0000	26722.0	41.39%	86384.2	31.98%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-439	-1.012e+03	0.0000	26425.0	40.93%	85228.5	31.55%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e-431	-9.933e+02	0.0000	13912.0	21.55%	38450.9	14.23%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-428	-9.857e+02	0.0000	5553.0	8.60%	11053.0	4.09%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-427	-9.837e+02	0.0000	5752.0	8.91%	11646.3	4.31%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-426	-9.814e+02	0.0000	10577.0	16.38%	27025.6	10.00%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e-425	-9.797e+02	0.0000	16342.0	25.31%	47298.2	17.51%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e-425	-9.794e+02	0.0000	9928.0	15.38%	24867.3	9.20%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-423	-9.757e+02	0.0000	8166.0	12.65%	19136.6	7.08%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-410	-9.459e+02	0.0000	8214.0	12.72%	19488.1	7.21%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-410	-9.453e+02	0.0000	11693.0	18.11%	31119.5	11.52%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-405	-9.348e+02	0.0000	7552.0	11.70%	17445.4	6.46%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-394	-9.073e+02	0.0000	9084.0	14.07%	22600.4	8.37%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e-392	-9.041e+02	0.0000	16099.0	24.94%	47176.8	17.46%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e-382	-8.816e+02	0.0000	22617.0	35.03%	71964.0	26.64%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e-380	-8.767e+02	0.0000	5683.0	8.80%	12006.8	4.44%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e-380	-8.754e+02	0.0000	10114.0	15.67%	26296.8	9.73%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-374	-8.616e+02	0.0000	3531.0	5.47%	5941.9	2.20%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e-368	-8.492e+02	0.0000	14110.0	21.86%	40521.0	15.00%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-367	-8.471e+02	0.0000	18894.0	29.27%	58174.9	21.53%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e-363	-8.375e+02	0.0000	22448.0	34.77%	71860.1	26.60%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-363	-8.361e+02	0.0000	3114.0	4.82%	4946.9	1.83%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-359	-8.281e+02	0.0000	8233.0	12.75%	20377.0	7.54%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-356	-8.219e+02	0.0000	4566.0	7.07%	8992.6	3.33%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e-354	-8.170e+02	0.0000	26258.0	40.67%	87060.3	32.23%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e-353	-8.140e+02	0.0000	9591.0	14.86%	25022.9	9.26%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e-352	-8.126e+02	0.0000	15425.0	23.89%	45674.3	16.91%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-346	-7.980e+02	0.0000	4487.0	6.95%	8881.5	3.29%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e-345	-7.958e+02	0.0000	12337.0	19.11%	34713.4	12.85%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e-343	-7.914e+02	0.0000	55197.0	85.50%	212772.0	78.76%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-343	-7.899e+02	0.0000	5065.0	7.85%	10626.3	3.93%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e-342	-7.884e+02	0.0000	12311.0	19.07%	34693.2	12.84%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-339	-7.820e+02	0.0000	4819.0	7.46%	9936.8	3.68%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-331	-7.644e+02	0.0000	7754.0	12.01%	19273.0	7.13%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-331	-7.625e+02	0.0000	20787.0	32.20%	66411.8	24.58%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e-327	-7.548e+02	0.0000	13677.0	21.19%	39926.4	14.78%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-327	-7.538e+02	0.0000	6709.0	10.39%	15955.0	5.91%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e-325	-7.503e+02	0.0000	6705.0	10.39%	15965.4	5.91%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-322	-7.428e+02	0.0000	12331.0	19.10%	35213.4	13.03%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-316	-7.297e+02	0.0000	6561.0	10.16%	15645.2	5.79%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e-316	-7.287e+02	0.0000	54758.0	84.82%	211469.3	78.28%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-314	-7.231e+02	0.0000	8219.0	12.73%	21136.4	7.82%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e-312	-7.185e+02	0.0000	6048.0	9.37%	14085.6	5.21%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e-310	-7.154e+02	0.0000	2592.0	4.01%	4038.6	1.49%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-310	-7.139e+02	0.0000	13849.0	21.45%	40989.2	15.17%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-308	-7.101e+02	0.0000	2823.0	4.37%	4653.6	1.72%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-307	-7.088e+02	0.0000	10570.0	16.37%	29322.6	10.85%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-304	-7.021e+02	0.0000	14792.0	22.91%	44575.7	16.50%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e-302	-6.967e+02	0.0000	33681.0	52.17%	118970.6	44.04%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e-300	-6.913e+02	0.0000	12351.0	19.13%	35814.7	13.26%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-299	-6.901e+02	0.0000	6823.0	10.57%	16774.8	6.21%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e-298	-6.882e+02	0.0000	28052.0	43.45%	96086.9	35.57%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-296	-6.821e+02	0.0000	2813.0	4.36%	4734.6	1.75%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-286	-6.591e+02	0.0000	1187.0	1.84%	1018.7	0.38%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-280	-6.448e+02	0.0000	1355.0	2.10%	1371.9	0.51%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-278	-6.407e+02	0.0000	17705.0	27.42%	56228.5	20.81%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-276	-6.377e+02	0.0000	7746.0	12.00%	20248.3	7.50%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-275	-6.346e+02	0.0000	10287.0	15.93%	29049.8	10.75%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e-270	-6.218e+02	0.0000	32522.0	50.38%	115384.4	42.71%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-268	-6.183e+02	0.0000	9290.0	14.39%	25716.0	9.52%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e-267	-6.158e+02	0.0000	836.0	1.29%	488.3	0.18%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e-262	-6.047e+02	0.0000	14311.0	22.17%	43954.6	16.27%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-262	-6.040e+02	0.0000	5252.0	8.14%	12329.3	4.56%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e-260	-5.988e+02	0.0000	11643.0	18.03%	34263.1	12.68%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e-257	-5.924e+02	0.0000	4765.0	7.38%	10874.4	4.03%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-255	-5.886e+02	0.0000	7265.0	11.25%	19041.9	7.05%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e-255	-5.877e+02	0.0000	36685.0	56.82%	133333.3	49.35%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e-254	-5.864e+02	0.0000	30583.0	47.37%	108003.2	39.98%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e-254	-5.854e+02	0.0000	28984.0	44.90%	101495.1	37.57%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-254	-5.854e+02	0.0000	2794.0	4.33%	5081.9	1.88%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e-252	-5.805e+02	0.0000	2843.0	4.40%	5238.9	1.94%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e-251	-5.782e+02	0.0000	10267.0	15.90%	29556.9	10.94%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-248	-5.711e+02	0.0000	1310.0	2.03%	1440.8	0.53%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e-245	-5.659e+02	0.0000	32762.0	50.75%	117329.5	43.43%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-245	-5.642e+02	0.0000	18769.0	29.07%	61357.1	22.71%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e-244	-5.624e+02	0.0000	14269.0	22.10%	44329.2	16.41%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-243	-5.609e+02	0.0000	10950.0	16.96%	32187.9	11.91%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e-243	-5.597e+02	0.0000	12494.0	19.35%	37807.8	13.99%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-241	-5.558e+02	0.0000	1802.0	2.79%	2604.2	0.96%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e-239	-5.510e+02	0.0000	14900.0	23.08%	46835.7	17.34%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-238	-5.487e+02	0.0000	25279.0	39.16%	87168.9	32.27%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-237	-5.466e+02	0.0000	8919.0	13.82%	25122.0	9.30%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-236	-5.455e+02	0.0000	26156.0	40.51%	90737.2	33.59%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e-236	-5.444e+02	0.0000	27192.0	42.12%	94928.7	35.14%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e-233	-5.379e+02	0.0000	4656.0	7.21%	10891.4	4.03%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-233	-5.375e+02	0.0000	7539.0	11.68%	20424.2	7.56%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-231	-5.337e+02	0.0000	16221.0	25.13%	52053.2	19.27%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-231	-5.325e+02	0.0000	1281.0	1.98%	1469.6	0.54%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e-231	-5.321e+02	0.0000	13788.0	21.36%	42930.2	15.89%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-231	-5.320e+02	0.0000	23285.0	36.07%	79507.4	29.43%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-229	-5.286e+02	0.0000	2420.0	3.75%	4302.7	1.59%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-228	-5.263e+02	0.0000	4690.0	7.26%	11077.7	4.10%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e-227	-5.239e+02	0.0000	41847.0	64.82%	156488.3	57.93%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e-224	-5.180e+02	0.0000	2949.0	4.57%	5833.5	2.16%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e-217	-5.019e+02	0.0000	16785.0	26.00%	54660.9	20.23%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e-215	-4.956e+02	0.0000	11044.0	17.11%	33284.2	12.32%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-212	-4.902e+02	0.0000	27608.0	42.76%	97563.3	36.11%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-212	-4.898e+02	0.0000	8486.0	13.14%	24184.6	8.95%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-207	-4.785e+02	0.0000	32838.0	50.87%	119235.1	44.14%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e-206	-4.750e+02	0.0000	6176.0	9.57%	16352.0	6.05%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e-204	-4.707e+02	0.0000	7106.0	11.01%	19566.1	7.24%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e-201	-4.636e+02	0.0000	26271.0	40.69%	92639.0	34.29%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e-200	-4.618e+02	0.0000	26172.0	40.54%	92273.2	34.16%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e-199	-4.597e+02	0.0000	38132.0	59.07%	141808.6	52.49%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e-198	-4.574e+02	0.0000	25176.0	39.00%	88345.1	32.70%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e-196	-4.521e+02	0.0000	32614.0	50.52%	118815.2	43.98%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e-195	-4.502e+02	0.0000	26215.0	40.61%	92661.5	34.30%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-193	-4.457e+02	0.0000	4125.0	6.39%	9845.7	3.64%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e-192	-4.442e+02	0.0000	1502.0	2.33%	2230.2	0.83%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-192	-4.440e+02	0.0000	10192.0	15.79%	30814.9	11.41%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-192	-4.437e+02	0.0000	5900.0	9.14%	15698.6	5.81%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e-188	-4.342e+02	0.0000	28559.0	44.24%	102483.0	37.93%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e-187	-4.327e+02	0.0000	35282.0	54.65%	130327.5	48.24%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-187	-4.327e+02	0.0000	2852.0	4.42%	6000.3	2.22%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-185	-4.280e+02	0.0000	3282.0	5.08%	7326.6	2.71%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-185	-4.273e+02	0.0000	16005.0	24.79%	52815.9	19.55%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-183	-4.222e+02	0.0000	10168.0	15.75%	30999.9	11.47%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e-181	-4.171e+02	0.0000	32696.0	50.65%	119854.6	44.36%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e-179	-4.126e+02	0.0000	10883.0	16.86%	33748.0	12.49%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-177	-4.093e+02	0.0000	4863.0	7.53%	12524.1	4.64%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e-176	-4.054e+02	0.0000	2367.0	3.67%	4725.4	1.75%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e-169	-3.912e+02	0.0000	37488.0	58.07%	140480.5	52.00%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e-167	-3.853e+02	0.0000	43877.0	67.96%	167977.1	62.18%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-166	-3.842e+02	0.0000	15739.0	24.38%	52493.6	19.43%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e-165	-3.809e+02	0.0000	41771.0	64.70%	158970.4	58.84%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e-161	-3.726e+02	0.0000	9843.0	15.25%	30456.8	11.27%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e-160	-3.694e+02	0.0000	38205.0	59.18%	143987.0	53.30%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e-159	-3.672e+02	0.0000	8259.0	12.79%	24762.8	9.17%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-159	-3.671e+02	0.0000	18859.0	29.21%	64924.2	24.03%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-158	-3.646e+02	0.0000	12497.0	19.36%	40454.9	14.97%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-156	-3.608e+02	0.0000	2703.0	4.19%	5972.9	2.21%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-156	-3.608e+02	0.0000	3933.0	6.09%	9861.6	3.65%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-156	-3.595e+02	0.0000	4784.0	7.41%	12692.0	4.70%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-155	-3.586e+02	0.0000	8980.0	13.91%	27485.9	10.17%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-154	-3.558e+02	0.0000	1814.0	2.81%	3397.9	1.26%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-153	-3.542e+02	0.0000	7092.0	10.99%	20743.4	7.68%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-153	-3.533e+02	0.0000	29620.0	45.88%	108497.0	40.16%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e-153	-3.531e+02	0.0000	4604.0	7.13%	12145.1	4.50%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-151	-3.500e+02	0.0000	2855.0	4.42%	6507.4	2.41%
SeqBias: TA-repeat	TATATATATA	1e-151	-3.500e+02	0.0000	45274.0	70.13%	174810.4	64.71%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-151	-3.492e+02	0.0000	27898.0	43.21%	101528.5	37.58%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-150	-3.463e+02	0.0000	2588.0	4.01%	5711.5	2.11%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e-149	-3.440e+02	0.0000	41019.0	63.54%	156548.6	57.95%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-149	-3.435e+02	0.0000	10538.0	16.32%	33432.6	12.38%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-148	-3.428e+02	0.0000	3233.0	5.01%	7742.7	2.87%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-147	-3.403e+02	0.0000	1292.0	2.00%	2062.6	0.76%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e-147	-3.399e+02	0.0000	19593.0	30.35%	68333.7	25.29%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e-146	-3.364e+02	0.0000	15211.0	23.56%	51279.7	18.98%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-145	-3.356e+02	0.0000	1055.0	1.63%	1490.2	0.55%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e-144	-3.328e+02	0.0000	3455.0	5.35%	8528.8	3.16%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e-144	-3.318e+02	0.0000	3028.0	4.69%	7171.8	2.65%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e-143	-3.299e+02	0.0000	10008.0	15.50%	31662.8	11.72%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-143	-3.299e+02	0.0000	1191.0	1.84%	1843.6	0.68%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-142	-3.277e+02	0.0000	2234.0	3.46%	4755.1	1.76%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e-141	-3.269e+02	0.0000	26407.0	40.90%	95938.1	35.51%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e-141	-3.264e+02	0.0000	25787.0	39.94%	93429.4	34.58%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-140	-3.243e+02	0.0000	2060.0	3.19%	4260.0	1.58%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e-140	-3.230e+02	0.0000	10749.0	16.65%	34526.0	12.78%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-139	-3.207e+02	0.0000	9425.0	14.60%	29636.8	10.97%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-138	-3.196e+02	0.0000	1013.0	1.57%	1439.2	0.53%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e-138	-3.184e+02	0.0000	11741.0	18.19%	38328.1	14.19%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-136	-3.154e+02	0.0000	12552.0	19.44%	41450.6	15.34%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e-136	-3.148e+02	0.0000	40141.0	62.18%	153464.1	56.81%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-136	-3.147e+02	0.0000	3431.0	5.31%	8591.9	3.18%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-135	-3.129e+02	0.0000	912.0	1.41%	1220.6	0.45%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e-135	-3.125e+02	0.0000	3693.0	5.72%	9467.4	3.50%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e-133	-3.067e+02	0.0000	29131.0	45.12%	107539.4	39.81%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e-133	-3.065e+02	0.0000	1324.0	2.05%	2275.4	0.84%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e-132	-3.051e+02	0.0000	6303.0	9.76%	18513.5	6.85%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-132	-3.045e+02	0.0000	7950.0	12.31%	24448.2	9.05%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e-132	-3.040e+02	0.0000	2639.0	4.09%	6141.1	2.27%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-131	-3.025e+02	0.0000	4075.0	6.31%	10825.9	4.01%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e-130	-3.006e+02	0.0000	46277.0	71.68%	180292.7	66.74%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-129	-2.989e+02	0.0000	1543.0	2.39%	2905.7	1.08%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-129	-2.976e+02	0.0000	3615.0	5.60%	9335.5	3.46%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e-129	-2.975e+02	0.0000	10871.0	16.84%	35383.6	13.10%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-128	-2.955e+02	0.0000	891.0	1.38%	1222.7	0.45%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e-127	-2.930e+02	0.0000	43197.0	66.91%	167099.7	61.85%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e-126	-2.906e+02	0.0000	9457.0	14.65%	30199.9	11.18%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e-125	-2.897e+02	0.0000	5415.0	8.39%	15557.5	5.76%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-122	-2.830e+02	0.0000	2004.0	3.10%	4327.8	1.60%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-122	-2.826e+02	0.0000	2268.0	3.51%	5132.4	1.90%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e-121	-2.794e+02	0.0000	10677.0	16.54%	34948.5	12.94%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-119	-2.762e+02	0.0000	4788.0	7.42%	13519.9	5.00%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-119	-2.759e+02	0.0000	2368.0	3.67%	5486.9	2.03%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e-118	-2.718e+02	0.0000	39858.0	61.74%	153310.9	56.75%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e-117	-2.701e+02	0.0000	588.0	0.91%	617.0	0.23%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-116	-2.679e+02	0.0000	3652.0	5.66%	9721.5	3.60%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e-115	-2.652e+02	0.0000	46853.0	72.57%	183647.2	67.98%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-112	-2.587e+02	0.0000	762.0	1.18%	1028.9	0.38%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e-110	-2.536e+02	0.0000	29601.0	45.85%	110782.5	41.01%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e-109	-2.517e+02	0.0000	8398.0	13.01%	26859.6	9.94%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e-107	-2.475e+02	0.0000	24629.0	38.15%	90577.3	33.53%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-107	-2.469e+02	0.0000	2254.0	3.49%	5329.7	1.97%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e-107	-2.469e+02	0.0000	54421.0	84.30%	217731.4	80.59%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-106	-2.461e+02	0.0000	21212.0	32.86%	76812.9	28.43%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e-105	-2.426e+02	0.0000	1293.0	2.00%	2471.4	0.91%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-104	-2.410e+02	0.0000	6929.0	10.73%	21603.0	8.00%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e-101	-2.348e+02	0.0000	6817.0	10.56%	21282.1	7.88%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e-100	-2.312e+02	0.0000	4648.0	7.20%	13531.6	5.01%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-100	-2.306e+02	0.0000	2981.0	4.62%	7816.4	2.89%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e-99	-2.301e+02	0.0000	1722.0	2.67%	3795.5	1.40%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e-99	-2.296e+02	0.0000	23473.0	36.36%	86344.9	31.96%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e-98	-2.266e+02	0.0000	29385.0	45.52%	110610.9	40.94%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e-97	-2.250e+02	0.0000	13775.0	21.34%	47855.4	17.71%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e-97	-2.242e+02	0.0000	6301.0	9.76%	19549.2	7.24%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-96	-2.222e+02	0.0000	1194.0	1.85%	2291.1	0.85%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e-93	-2.154e+02	0.0000	1020.0	1.58%	1841.0	0.68%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e-92	-2.139e+02	0.0000	440.0	0.68%	437.5	0.16%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-92	-2.125e+02	0.0000	12097.0	18.74%	41607.0	15.40%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-91	-2.111e+02	0.0000	1319.0	2.04%	2706.8	1.00%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-91	-2.111e+02	0.0000	1319.0	2.04%	2706.8	1.00%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e-90	-2.092e+02	0.0000	25308.0	39.20%	94352.9	34.93%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e-90	-2.084e+02	0.0000	3691.0	5.72%	10446.6	3.87%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-90	-2.076e+02	0.0000	3556.0	5.51%	9988.8	3.70%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-89	-2.064e+02	0.0000	897.0	1.39%	1547.8	0.57%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-89	-2.052e+02	0.0000	3614.0	5.60%	10214.9	3.78%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-86	-1.992e+02	0.0000	926.0	1.43%	1655.7	0.61%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-85	-1.965e+02	0.0000	21500.0	33.30%	79237.3	29.33%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e-85	-1.962e+02	0.0000	5985.0	9.27%	18802.0	6.96%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-84	-1.947e+02	0.0000	850.0	1.32%	1470.3	0.54%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e-84	-1.944e+02	0.0000	1182.0	1.83%	2398.0	0.89%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-83	-1.919e+02	0.0000	2477.0	3.84%	6486.2	2.40%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e-82	-1.891e+02	0.0000	4527.0	7.01%	13620.1	5.04%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e-81	-1.878e+02	0.0000	39179.0	60.69%	152752.2	56.54%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e-81	-1.873e+02	0.0000	23604.0	36.56%	88023.8	32.58%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-80	-1.852e+02	0.0000	6368.0	9.86%	20382.1	7.54%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e-80	-1.847e+02	0.0000	7662.0	11.87%	25216.6	9.33%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e-79	-1.835e+02	0.0000	1202.0	1.86%	2515.6	0.93%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e-79	-1.826e+02	0.0000	1931.0	2.99%	4778.5	1.77%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-79	-1.822e+02	0.0000	6003.0	9.30%	19083.0	7.06%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-78	-1.814e+02	0.0000	3599.0	5.57%	10429.7	3.86%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-76	-1.762e+02	0.0000	2712.0	4.20%	7423.0	2.75%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e-76	-1.756e+02	0.0000	3562.0	5.52%	10368.4	3.84%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-74	-1.716e+02	0.0000	3880.0	6.01%	11539.1	4.27%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-73	-1.695e+02	0.0000	28872.0	44.72%	110174.0	40.78%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e-72	-1.666e+02	0.0000	10901.0	16.89%	37958.7	14.05%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e-71	-1.656e+02	0.0000	28378.0	43.96%	108258.6	40.07%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e-71	-1.643e+02	0.0000	732.0	1.13%	1281.4	0.47%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-70	-1.628e+02	0.0000	1536.0	2.38%	3668.9	1.36%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e-70	-1.617e+02	0.0000	10856.0	16.82%	37893.8	14.03%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e-70	-1.612e+02	0.0000	33008.0	51.13%	127628.3	47.24%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e-69	-1.604e+02	0.0000	19408.0	30.06%	71816.7	26.58%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e-68	-1.575e+02	0.0000	2424.0	3.75%	6633.0	2.46%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-67	-1.562e+02	0.0000	14971.0	23.19%	54190.4	20.06%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e-67	-1.550e+02	0.0000	2995.0	4.64%	8625.2	3.19%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e-66	-1.540e+02	0.0000	2234.0	3.46%	6025.4	2.23%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-66	-1.538e+02	0.0000	4625.0	7.16%	14464.4	5.35%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e-66	-1.527e+02	0.0000	13537.0	20.97%	48607.4	17.99%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e-65	-1.516e+02	0.0000	6882.0	10.66%	22881.1	8.47%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e-65	-1.508e+02	0.0000	9646.0	14.94%	33454.8	12.38%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e-64	-1.493e+02	0.0000	4163.0	6.45%	12853.9	4.76%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e-64	-1.480e+02	0.0000	866.0	1.34%	1729.2	0.64%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-62	-1.429e+02	0.0000	855.0	1.32%	1724.9	0.64%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e-60	-1.394e+02	0.0000	9312.0	14.42%	32422.9	12.00%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-60	-1.391e+02	0.0000	12183.0	18.87%	43628.5	16.15%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e-60	-1.385e+02	0.0000	4563.0	7.07%	14472.8	5.36%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e-58	-1.336e+02	0.0000	28051.0	43.45%	107987.8	39.97%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e-57	-1.327e+02	0.0000	2215.0	3.43%	6176.0	2.29%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e-57	-1.321e+02	0.0000	2182.0	3.38%	6068.2	2.25%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-57	-1.316e+02	0.0000	3571.0	5.53%	10967.1	4.06%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-56	-1.312e+02	0.0000	2911.0	4.51%	8616.1	3.19%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-56	-1.309e+02	0.0000	10283.0	15.93%	36395.4	13.47%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-56	-1.308e+02	0.0000	1434.0	2.22%	3587.1	1.33%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e-55	-1.288e+02	0.0000	3875.0	6.00%	12108.6	4.48%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-55	-1.287e+02	0.0000	15459.0	23.95%	56911.0	21.07%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e-53	-1.243e+02	0.0000	4569.0	7.08%	14725.9	5.45%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-53	-1.241e+02	0.0000	582.0	0.90%	1048.2	0.39%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e-53	-1.237e+02	0.0000	1730.0	2.68%	4623.3	1.71%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-53	-1.228e+02	0.0000	2378.0	3.68%	6847.8	2.53%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-52	-1.212e+02	0.0000	1104.0	1.71%	2608.7	0.97%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e-52	-1.206e+02	0.0000	19142.0	29.65%	71988.5	26.65%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e-51	-1.189e+02	0.0000	1144.0	1.77%	2751.4	1.02%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-51	-1.179e+02	0.0000	1547.0	2.40%	4067.1	1.51%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e-51	-1.178e+02	0.0000	14863.0	23.02%	54864.0	20.31%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e-50	-1.168e+02	0.0000	2392.0	3.71%	6967.6	2.58%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e-50	-1.167e+02	0.0000	3688.0	5.71%	11611.9	4.30%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e-50	-1.166e+02	0.0000	940.0	1.46%	2131.7	0.79%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e-50	-1.156e+02	0.0000	3475.0	5.38%	10852.9	4.02%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-49	-1.141e+02	0.0000	100.0	0.15%	22.8	0.01%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e-48	-1.125e+02	0.0000	275.0	0.43%	323.3	0.12%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e-48	-1.111e+02	0.0000	2080.0	3.22%	5946.5	2.20%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-47	-1.103e+02	0.0000	2107.0	3.26%	6049.8	2.24%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e-47	-1.100e+02	0.0000	16931.0	26.23%	63416.3	23.47%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-46	-1.063e+02	0.0000	3459.0	5.36%	10937.2	4.05%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e-46	-1.060e+02	0.0000	5900.0	9.14%	20068.1	7.43%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-45	-1.044e+02	0.0000	1389.0	2.15%	3666.8	1.36%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e-45	-1.043e+02	0.0000	14690.0	22.75%	54603.8	20.21%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e-44	-1.030e+02	0.0000	2473.0	3.83%	7426.8	2.75%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e-43	-1.010e+02	0.0000	13754.0	21.30%	50966.6	18.87%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e-43	-9.952e+01	0.0000	21078.0	32.65%	80622.8	29.84%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-43	-9.937e+01	0.0000	1452.0	2.25%	3924.9	1.45%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e-43	-9.935e+01	0.0000	4959.0	7.68%	16640.8	6.16%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e-41	-9.486e+01	0.0000	4522.0	7.00%	15083.4	5.58%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e-39	-9.156e+01	0.0000	3877.0	6.01%	12731.6	4.71%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e-39	-9.091e+01	0.0000	10602.0	16.42%	38752.7	14.34%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e-39	-9.077e+01	0.0000	1798.0	2.79%	5202.0	1.93%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e-39	-9.032e+01	0.0000	9524.0	14.75%	34515.4	12.78%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e-38	-8.979e+01	0.0000	4409.0	6.83%	14758.8	5.46%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e-38	-8.915e+01	0.0000	10545.0	16.33%	38581.7	14.28%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-38	-8.765e+01	0.0000	6437.0	9.97%	22545.8	8.35%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-37	-8.744e+01	0.0000	8353.0	12.94%	30001.4	11.11%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-37	-8.588e+01	0.0000	3870.0	5.99%	12811.4	4.74%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-37	-8.555e+01	0.0000	1563.0	2.42%	4447.1	1.65%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e-36	-8.518e+01	0.0000	2125.0	3.29%	6426.6	2.38%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-36	-8.378e+01	0.0000	596.0	0.92%	1294.4	0.48%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-35	-8.263e+01	0.0000	189.0	0.29%	211.9	0.08%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e-35	-8.248e+01	0.0000	430.0	0.67%	819.4	0.30%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-35	-8.207e+01	0.0000	20738.0	32.12%	79941.6	29.59%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e-35	-8.204e+01	0.0000	828.0	1.28%	2025.4	0.75%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e-35	-8.128e+01	0.0000	14034.0	21.74%	52775.4	19.54%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-35	-8.069e+01	0.0000	970.0	1.50%	2495.3	0.92%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e-34	-7.972e+01	0.0000	24054.0	37.26%	93652.8	34.67%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e-34	-7.969e+01	0.0000	3338.0	5.17%	10942.9	4.05%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-34	-7.954e+01	0.0000	703.0	1.09%	1649.7	0.61%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e-34	-7.920e+01	0.0000	1658.0	2.57%	4852.8	1.80%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-34	-7.863e+01	0.0000	505.0	0.78%	1054.9	0.39%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e-32	-7.433e+01	0.0000	7450.0	11.54%	26841.5	9.94%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e-31	-7.263e+01	0.0000	270.0	0.42%	431.7	0.16%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e-31	-7.170e+01	0.0000	4929.0	7.63%	17131.5	6.34%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-30	-7.115e+01	0.0000	424.0	0.66%	859.2	0.32%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-29	-6.850e+01	0.0000	5600.0	8.67%	19799.0	7.33%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e-29	-6.805e+01	0.0000	567.0	0.88%	1306.0	0.48%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e-29	-6.733e+01	0.0000	434.0	0.67%	909.2	0.34%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-29	-6.724e+01	0.0000	175.0	0.27%	219.6	0.08%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-29	-6.702e+01	0.0000	12300.0	19.05%	46349.6	17.16%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-27	-6.426e+01	0.0000	2046.0	3.17%	6447.0	2.39%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e-27	-6.392e+01	0.0000	10458.0	16.20%	39090.2	14.47%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-27	-6.325e+01	0.0000	19813.0	30.69%	77007.9	28.50%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e-26	-6.182e+01	0.0000	62.0	0.10%	21.2	0.01%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e-26	-6.044e+01	0.0000	5905.0	9.15%	21207.8	7.85%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e-26	-5.990e+01	0.0000	1831.0	2.84%	5734.8	2.12%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-25	-5.984e+01	0.0000	2242.0	3.47%	7238.9	2.68%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-25	-5.946e+01	0.0000	508.0	0.79%	1182.4	0.44%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e-25	-5.897e+01	0.0000	88.0	0.14%	62.6	0.02%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e-25	-5.782e+01	0.0000	18111.0	28.05%	70310.0	26.03%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e-25	-5.766e+01	0.0000	8036.0	12.45%	29679.6	10.99%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e-24	-5.702e+01	0.0000	7503.0	11.62%	27592.1	10.21%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-24	-5.603e+01	0.0000	160.0	0.25%	216.5	0.08%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-23	-5.298e+01	0.0000	840.0	1.30%	2323.7	0.86%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e-22	-5.270e+01	0.0000	7894.0	12.23%	29292.2	10.84%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e-22	-5.258e+01	0.0000	1884.0	2.92%	6047.0	2.24%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e-22	-5.121e+01	0.0000	7545.0	11.69%	27961.3	10.35%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e-22	-5.096e+01	0.0000	1921.0	2.98%	6210.9	2.30%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e-21	-5.063e+01	0.0000	290.0	0.45%	581.0	0.22%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-21	-5.058e+01	0.0000	7771.0	12.04%	28881.8	10.69%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e-21	-5.056e+01	0.0000	2552.0	3.95%	8568.8	3.17%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e-21	-4.964e+01	0.0000	8705.0	13.48%	32636.2	12.08%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e-21	-4.944e+01	0.0000	11083.0	17.17%	42180.5	15.61%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-21	-4.848e+01	0.0000	355.0	0.55%	785.7	0.29%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-20	-4.767e+01	0.0000	432.0	0.67%	1028.7	0.38%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e-20	-4.766e+01	0.0000	837.0	1.30%	2370.6	0.88%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e-20	-4.700e+01	0.0000	4295.0	6.65%	15328.4	5.67%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e-20	-4.699e+01	0.0000	763.0	1.18%	2124.8	0.79%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e-19	-4.589e+01	0.0000	432.0	0.67%	1041.6	0.39%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-19	-4.511e+01	0.0000	931.0	1.44%	2726.7	1.01%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e-19	-4.471e+01	0.0000	2898.0	4.49%	10008.1	3.70%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e-18	-4.238e+01	0.0000	7549.0	11.69%	28312.3	10.48%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-18	-4.233e+01	0.0000	11777.0	18.24%	45311.9	16.77%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e-18	-4.194e+01	0.0000	5234.0	8.11%	19156.0	7.09%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-17	-4.124e+01	0.0000	595.0	0.92%	1614.5	0.60%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e-17	-3.993e+01	0.0000	315.0	0.49%	718.7	0.27%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e-17	-3.928e+01	0.0000	6720.0	10.41%	25133.5	9.30%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-16	-3.851e+01	0.0000	3805.0	5.89%	13671.4	5.06%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e-16	-3.705e+01	0.0000	73.0	0.11%	73.6	0.03%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-15	-3.614e+01	0.0000	3576.0	5.54%	12851.5	4.76%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e-15	-3.541e+01	0.0000	4934.0	7.64%	18200.9	6.74%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e-15	-3.535e+01	0.0000	118.0	0.18%	180.8	0.07%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e-15	-3.534e+01	0.0000	10052.0	15.57%	38682.3	14.32%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-15	-3.481e+01	0.0000	4135.0	6.40%	15077.8	5.58%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e-15	-3.473e+01	0.0000	516.0	0.80%	1413.4	0.52%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e-14	-3.417e+01	0.0000	15243.0	23.61%	59868.3	22.16%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e-14	-3.388e+01	0.0000	16938.0	26.24%	66832.3	24.74%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e-14	-3.357e+01	0.0000	1222.0	1.89%	3941.9	1.46%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e-14	-3.245e+01	0.0000	3847.0	5.96%	14026.5	5.19%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e-14	-3.243e+01	0.0000	13593.0	21.06%	53230.9	19.70%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-13	-3.126e+01	0.0000	1070.0	1.66%	3423.3	1.27%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e-13	-3.097e+01	0.0000	2435.0	3.77%	8580.7	3.18%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e-13	-3.032e+01	0.0000	2385.0	3.69%	8406.0	3.11%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e-12	-2.840e+01	0.0000	15583.0	24.14%	61632.2	22.81%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e-12	-2.782e+01	0.0000	12242.0	18.96%	47999.2	17.77%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e-11	-2.657e+01	0.0000	480.0	0.74%	1378.1	0.51%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e-11	-2.622e+01	0.0000	14238.0	22.05%	56266.9	20.83%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e-11	-2.578e+01	0.0000	919.0	1.42%	2963.6	1.10%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-11	-2.574e+01	0.0000	5201.0	8.06%	19643.5	7.27%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-10	-2.529e+01	0.0000	583.0	0.90%	1755.6	0.65%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e-10	-2.423e+01	0.0000	315.0	0.49%	841.2	0.31%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e-10	-2.365e+01	0.0000	10217.0	15.83%	40008.1	14.81%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e-10	-2.365e+01	0.0000	162.0	0.25%	356.9	0.13%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-9	-2.293e+01	0.0000	4504.0	6.98%	16986.1	6.29%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e-9	-2.284e+01	0.0000	7709.0	11.94%	29875.2	11.06%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-9	-2.280e+01	0.0000	8536.0	13.22%	33228.2	12.30%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e-9	-2.280e+01	0.0000	8536.0	13.22%	33228.2	12.30%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e-9	-2.211e+01	0.0000	638.0	0.99%	1998.1	0.74%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e-9	-2.180e+01	0.0000	4329.0	6.71%	16338.8	6.05%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e-9	-2.118e+01	0.0000	2015.0	3.12%	7234.9	2.68%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-8	-1.980e+01	0.0000	3308.0	5.12%	12363.5	4.58%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e-8	-1.937e+01	0.0000	6514.0	10.09%	25240.6	9.34%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-8	-1.928e+01	0.0000	973.0	1.51%	3289.3	1.22%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-8	-1.913e+01	0.0000	12347.0	19.13%	49029.1	18.15%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e-8	-1.889e+01	0.0000	970.0	1.50%	3286.6	1.22%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e-8	-1.863e+01	0.0000	5117.0	7.93%	19647.4	7.27%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-7	-1.724e+01	0.0000	950.0	1.47%	3247.6	1.20%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-7	-1.718e+01	0.0000	2008.0	3.11%	7335.1	2.72%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e-7	-1.694e+01	0.0000	18987.0	29.41%	76585.3	28.35%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e-6	-1.593e+01	0.0000	12166.0	18.84%	48544.1	17.97%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-6	-1.507e+01	0.0000	13326.0	20.64%	53390.2	19.76%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e-6	-1.425e+01	0.0000	9049.0	14.02%	35902.6	13.29%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-5	-1.356e+01	0.0000	1131.0	1.75%	4034.3	1.49%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e-5	-1.345e+01	0.0000	10375.0	16.07%	41403.3	15.33%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-5	-1.304e+01	0.0000	600.0	0.93%	2019.9	0.75%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e-5	-1.281e+01	0.0000	3368.0	5.22%	12924.1	4.78%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-5	-1.267e+01	0.0000	521.0	0.81%	1731.7	0.64%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-5	-1.242e+01	0.0000	3629.0	5.62%	13996.0	5.18%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e-5	-1.241e+01	0.0000	8567.0	13.27%	34079.4	12.61%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e-5	-1.172e+01	0.0000	2796.0	4.33%	10686.4	3.96%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e-4	-1.031e+01	0.0001	1984.0	3.07%	7509.9	2.78%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-4	-9.774e+00	0.0001	740.0	1.15%	2632.0	0.97%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-4	-9.715e+00	0.0001	13497.0	20.91%	54641.7	20.23%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e-4	-9.217e+00	0.0002	1571.0	2.43%	5914.0	2.19%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e-4	-9.217e+00	0.0002	1571.0	2.43%	5914.0	2.19%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e-3	-9.138e+00	0.0002	1397.0	2.16%	5227.8	1.94%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e-3	-8.382e+00	0.0004	3857.0	5.97%	15172.6	5.62%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e-3	-7.158e+00	0.0014	7838.0	12.14%	31586.5	11.69%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e-3	-6.967e+00	0.0017	891.0	1.38%	3312.4	1.23%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-2	-6.221e+00	0.0035	13964.0	21.63%	57036.8	21.11%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e-2	-6.183e+00	0.0037	4261.0	6.60%	16997.1	6.29%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e-2	-5.956e+00	0.0046	9429.0	14.61%	38296.0	14.18%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e-2	-5.550e+00	0.0069	1229.0	1.90%	4721.5	1.75%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e-2	-5.415e+00	0.0079	9510.0	14.73%	38704.2	14.33%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e-2	-5.305e+00	0.0087	13722.0	21.25%	56177.3	20.79%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e-2	-4.740e+00	0.0154	3699.0	5.73%	14831.1	5.49%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e-2	-4.618e+00	0.0173	2959.0	4.58%	11811.1	4.37%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-4.537e+00	0.0188	4844.0	7.50%	19558.7	7.24%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e-1	-4.306e+00	0.0236	1821.0	2.82%	7192.8	2.66%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-4.031e+00	0.0310	3095.0	4.79%	12424.9	4.60%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e-1	-3.875e+00	0.0362	297.0	0.46%	1084.3	0.40%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e-1	-3.824e+00	0.0380	178.0	0.28%	624.1	0.23%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e-1	-3.736e+00	0.0414	6546.0	10.14%	26689.0	9.88%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e-1	-3.675e+00	0.0440	175.0	0.27%	616.0	0.23%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e-1	-3.570e+00	0.0488	1358.0	2.10%	5362.7	1.99%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e-1	-3.518e+00	0.0513	794.0	1.23%	3080.1	1.14%
SeqBias: polyC-repeat	CCCCCCCCCC	1e-1	-3.426e+00	0.0561	63773.0	98.78%	266619.5	98.69%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e-1	-3.248e+00	0.0670	1937.0	3.00%	7752.7	2.87%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e-1	-2.744e+00	0.1106	20645.0	31.98%	85552.9	31.67%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	-2.068e+00	0.2171	1542.0	2.39%	6246.9	2.31%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-1.289e+00	0.4722	4821.0	7.47%	19987.9	7.40%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e0	-1.159e+00	0.5367	15916.0	24.65%	66353.8	24.56%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e0	-1.157e+00	0.5373	64552.0	99.99%	270117.2	99.99%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-1.085e+00	0.5763	3439.0	5.33%	14278.2	5.29%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.071e+00	0.5835	6820.0	10.56%	28390.5	10.51%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	-1.069e+00	0.5835	46.0	0.07%	178.4	0.07%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	-9.613e-01	0.6487	152.0	0.24%	617.5	0.23%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-8.505e-01	0.7235	972.0	1.51%	4039.7	1.50%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e0	-7.592e-01	0.7913	7745.0	12.00%	32377.2	11.98%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	-7.510e-01	0.7965	3.0	0.00%	10.0	0.00%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	-7.173e-01	0.8225	66.0	0.10%	273.6	0.10%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	-6.303e-01	0.8957	23.0	0.04%	96.2	0.04%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	-6.198e-01	0.9037	1553.0	2.41%	6515.0	2.41%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-4.459e-01	1.0000	10587.0	16.40%	44458.1	16.46%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-4.179e-01	1.0000	10422.0	16.14%	43788.1	16.21%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e0	-3.121e-01	1.0000	11152.0	17.27%	46942.2	17.38%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-3.003e-01	1.0000	4982.0	7.72%	21050.1	7.79%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	-2.069e-01	1.0000	799.0	1.24%	3459.2	1.28%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-1.168e-01	1.0000	3585.0	5.55%	15334.4	5.68%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e0	-1.027e-01	1.0000	21061.0	32.62%	88850.0	32.89%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-9.812e-02	1.0000	15389.0	23.84%	65062.2	24.08%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-9.712e-02	1.0000	594.0	0.92%	2636.8	0.98%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-8.309e-02	1.0000	8672.0	13.43%	36858.0	13.64%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	-7.619e-02	1.0000	17.0	0.03%	100.1	0.04%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-5.830e-02	1.0000	23415.0	36.27%	98883.7	36.60%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-5.635e-02	1.0000	14719.0	22.80%	62388.1	23.09%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-5.543e-02	1.0000	11927.0	18.47%	50649.3	18.75%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-5.488e-02	1.0000	5594.0	8.66%	23947.7	8.86%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e0	-4.698e-02	1.0000	8211.0	12.72%	35026.4	12.97%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-4.582e-02	1.0000	3273.0	5.07%	14139.2	5.23%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-4.516e-02	1.0000	12872.0	19.94%	54672.0	20.24%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-4.308e-02	1.0000	23300.0	36.09%	98482.7	36.45%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-1.723e-02	1.0000	1654.0	2.56%	7322.4	2.71%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e0	-1.503e-02	1.0000	10599.0	16.42%	45309.0	16.77%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-1.148e-02	1.0000	3676.0	5.69%	16012.4	5.93%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-1.053e-02	1.0000	2415.0	3.74%	10630.7	3.94%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	-9.327e-03	1.0000	1417.0	2.19%	6344.4	2.35%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-9.035e-03	1.0000	4839.0	7.50%	20992.1	7.77%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	-4.440e-03	1.0000	3.0	0.00%	42.6	0.02%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-3.596e-03	1.0000	16427.0	25.44%	70130.7	25.96%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	-2.978e-03	1.0000	824.0	1.28%	3823.6	1.42%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	-1.247e-03	1.0000	123.0	0.19%	683.5	0.25%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-9.390e-04	1.0000	21547.0	33.38%	91904.6	34.02%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-7.150e-04	1.0000	3679.0	5.70%	16282.2	6.03%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	-6.840e-04	1.0000	155.0	0.24%	848.4	0.31%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	-2.650e-04	1.0000	9359.0	14.50%	40619.4	15.04%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e0	-2.430e-04	1.0000	7866.0	12.18%	34279.0	12.69%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	-1.230e-04	1.0000	4723.0	7.32%	20910.9	7.74%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	-5.900e-05	1.0000	1575.0	2.44%	7314.3	2.71%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	-4.700e-05	1.0000	32.0	0.05%	259.6	0.10%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	-4.300e-05	1.0000	160.0	0.25%	923.6	0.34%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	-3.300e-05	1.0000	10612.0	16.44%	46173.6	17.09%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-2.600e-05	1.0000	513.0	0.79%	2595.9	0.96%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.100e-05	1.0000	2519.0	3.90%	11537.5	4.27%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.000e-05	1.0000	16936.0	26.23%	73105.6	27.06%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	-8.000e-06	1.0000	1339.0	2.07%	6358.8	2.35%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-7.000e-06	1.0000	1649.0	2.55%	7735.9	2.86%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-7.000e-06	1.0000	7569.0	11.72%	33344.7	12.34%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-7.000e-06	1.0000	9383.0	14.53%	41094.9	15.21%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e0	-4.000e-06	1.0000	4208.0	6.52%	18940.5	7.01%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-4.000e-06	1.0000	2967.0	4.60%	13553.3	5.02%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.000e-06	1.0000	10398.0	16.11%	45569.4	16.87%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	-1.000e-06	1.0000	180.0	0.28%	1088.5	0.40%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e0	-0.000e+00	1.0000	1287.0	1.99%	6300.1	2.33%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-0.000e+00	1.0000	14540.0	22.52%	63492.0	23.50%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-0.000e+00	1.0000	12053.0	18.67%	52921.9	19.59%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-0.000e+00	1.0000	5237.0	8.11%	23719.4	8.78%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-0.000e+00	1.0000	12726.0	19.71%	55864.4	20.68%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	-0.000e+00	1.0000	4294.0	6.65%	19629.5	7.27%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e0	-0.000e+00	1.0000	5751.0	8.91%	25962.2	9.61%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	-0.000e+00	1.0000	816.0	1.26%	4188.8	1.55%
SeqBias: C/A-bias	MMMMMMMMMM	1e0	-0.000e+00	1.0000	64541.0	99.97%	270147.7	100.00%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-0.000e+00	1.0000	8221.0	12.73%	36663.5	13.57%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e0	-0.000e+00	1.0000	1368.0	2.12%	6785.4	2.51%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e0	-0.000e+00	1.0000	12280.0	19.02%	54243.2	20.08%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-0.000e+00	1.0000	74.0	0.11%	710.3	0.26%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e0	-0.000e+00	1.0000	2678.0	4.15%	17479.3	6.47%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	-0.000e+00	1.0000	818.0	1.27%	5338.5	1.98%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-0.000e+00	1.0000	19030.0	29.48%	85169.8	31.53%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-0.000e+00	1.0000	15425.0	23.89%	73004.5	27.02%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	-0.000e+00	1.0000	6224.0	9.64%	29521.7	10.93%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e0	-0.000e+00	1.0000	23132.0	35.83%	118753.5	43.96%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-0.000e+00	1.0000	1288.0	2.00%	6461.7	2.39%
 Ik-1	NHTTGGGAATRCC	1e0	0.000e+00	1.0000	64559.0	100.00%	270156.1	100.00%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	0.000e+00	1.0000	6704.0	10.38%	33490.9	12.40%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	0.000e+00	1.0000	261.0	0.40%	6043.0	2.24%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	0.000e+00	1.0000	8527.0	13.21%	44166.0	16.35%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e0	0.000e+00	1.0000	7844.0	12.15%	36148.7	13.38%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	0.000e+00	1.0000	6315.0	9.78%	78448.9	29.04%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	0.000e+00	1.0000	10817.0	16.76%	55689.9	20.61%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	0.000e+00	1.0000	1340.0	2.08%	16938.5	6.27%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e0	0.000e+00	1.0000	36787.0	56.98%	170140.0	62.98%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	0.000e+00	1.0000	2064.0	3.20%	37354.1	13.83%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	0.000e+00	1.0000	2407.0	3.73%	12183.1	4.51%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e0	0.000e+00	1.0000	17127.0	26.53%	85087.4	31.50%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	0.000e+00	1.0000	12567.0	19.47%	60695.4	22.47%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	0.000e+00	1.0000	2557.0	3.96%	18101.3	6.70%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	0.000e+00	1.0000	22845.0	35.39%	110930.1	41.06%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	0.000e+00	1.0000	14818.0	22.95%	70121.2	25.96%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	0.000e+00	1.0000	7927.0	12.28%	41791.9	15.47%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	0.000e+00	1.0000	4974.0	7.70%	23386.9	8.66%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e0	0.000e+00	1.0000	18584.0	28.79%	84346.8	31.22%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e0	0.000e+00	1.0000	2806.0	4.35%	14310.4	5.30%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e0	0.000e+00	1.0000	537.0	0.83%	13147.0	4.87%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e0	0.000e+00	1.0000	13822.0	21.41%	80254.8	29.71%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	0.000e+00	1.0000	1380.0	2.14%	27502.9	10.18%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e0	0.000e+00	1.0000	789.0	1.22%	7664.3	2.84%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	0.000e+00	1.0000	2905.0	4.50%	16527.9	6.12%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	0.000e+00	1.0000	152.0	0.24%	3586.1	1.33%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e0	0.000e+00	1.0000	29543.0	45.76%	147391.7	54.56%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	0.000e+00	1.0000	3553.0	5.50%	63474.9	23.50%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	0.000e+00	1.0000	9112.0	14.11%	107257.1	39.70%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	0.000e+00	1.0000	1992.0	3.09%	38715.0	14.33%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e0	0.000e+00	1.0000	9058.0	14.03%	51987.0	19.24%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	0.000e+00	1.0000	16778.0	25.99%	73912.6	27.36%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e0	0.000e+00	1.0000	3087.0	4.78%	16486.9	6.10%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	0.000e+00	1.0000	7955.0	12.32%	37808.5	14.00%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e0	0.000e+00	1.0000	6446.0	9.98%	31789.0	11.77%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	0.000e+00	1.0000	19412.0	30.07%	98529.1	36.47%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e0	0.000e+00	1.0000	1668.0	2.58%	11323.2	4.19%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	0.000e+00	1.0000	2617.0	4.05%	40266.1	14.90%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e0	0.000e+00	1.0000	17846.0	27.64%	88899.4	32.91%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e0	0.000e+00	1.0000	23239.0	36.00%	125172.7	46.33%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	0.000e+00	1.0000	20816.0	32.24%	101781.9	37.68%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	0.000e+00	1.0000	3908.0	6.05%	55377.4	20.50%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	0.000e+00	1.0000	10522.0	16.30%	49651.3	18.38%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e0	0.000e+00	1.0000	10049.0	15.57%	50673.8	18.76%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	0.000e+00	1.0000	5081.0	7.87%	35172.6	13.02%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	0.000e+00	1.0000	948.0	1.47%	17499.4	6.48%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	0.000e+00	1.0000	5263.0	8.15%	38576.7	14.28%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	0.000e+00	1.0000	2751.0	4.26%	48870.5	18.09%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	160.0	0.25%	1894.2	0.70%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	0.000e+00	1.0000	4245.0	6.58%	23682.3	8.77%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	0.000e+00	1.0000	1756.0	2.72%	20246.1	7.49%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	0.000e+00	1.0000	18740.0	29.03%	85696.4	31.72%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	0.000e+00	1.0000	768.0	1.19%	8184.5	3.03%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	0.000e+00	1.0000	5707.0	8.84%	32925.3	12.19%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	0.000e+00	1.0000	1221.0	1.89%	25897.1	9.59%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	0.000e+00	1.0000	875.0	1.36%	16265.6	6.02%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e0	0.000e+00	1.0000	1884.0	2.92%	11619.5	4.30%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	0.000e+00	1.0000	119.0	0.18%	4640.2	1.72%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e0	0.000e+00	1.0000	10060.0	15.58%	72917.7	26.99%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	0.000e+00	1.0000	679.0	1.05%	9892.8	3.66%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	0.000e+00	1.0000	14582.0	22.59%	64873.2	24.01%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	0.000e+00	1.0000	5094.0	7.89%	28724.8	10.63%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e0	0.000e+00	1.0000	1724.0	2.67%	12558.8	4.65%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	0.000e+00	1.0000	3880.0	6.01%	43214.2	16.00%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	0.000e+00	1.0000	64376.0	99.72%	269766.7	99.86%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	0.000e+00	1.0000	1826.0	2.83%	32496.6	12.03%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	0.000e+00	1.0000	20487.0	31.73%	98566.9	36.49%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	0.000e+00	1.0000	965.0	1.49%	5382.5	1.99%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	0.000e+00	1.0000	1218.0	1.89%	21896.8	8.11%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	0.000e+00	1.0000	638.0	0.99%	6588.5	2.44%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e0	0.000e+00	1.0000	16159.0	25.03%	83332.6	30.85%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e0	0.000e+00	1.0000	16783.0	26.00%	85280.7	31.57%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	0.000e+00	1.0000	2145.0	3.32%	39967.1	14.79%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	0.000e+00	1.0000	18756.0	29.05%	85178.0	31.53%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e0	0.000e+00	1.0000	27410.0	42.46%	138953.6	51.43%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	0.000e+00	1.0000	590.0	0.91%	12208.9	4.52%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e0	0.000e+00	1.0000	1972.0	3.05%	14116.4	5.23%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e0	0.000e+00	1.0000	169.0	0.26%	1857.3	0.69%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	0.000e+00	1.0000	2514.0	3.89%	12994.1	4.81%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e0	0.000e+00	1.0000	3600.0	5.58%	22615.3	8.37%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	0.000e+00	1.0000	14038.0	21.74%	65095.8	24.10%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	0.000e+00	1.0000	47163.0	73.05%	202633.0	75.01%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	0.000e+00	1.0000	2045.0	3.17%	31177.7	11.54%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e0	0.000e+00	1.0000	1525.0	2.36%	9404.5	3.48%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	0.000e+00	1.0000	6082.0	9.42%	27645.4	10.23%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	0.000e+00	1.0000	52.0	0.08%	1498.7	0.55%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	0.000e+00	1.0000	13493.0	20.90%	65845.8	24.37%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	0.000e+00	1.0000	2699.0	4.18%	30713.2	11.37%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e0	0.000e+00	1.0000	5271.0	8.16%	24828.2	9.19%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	0.000e+00	1.0000	3414.0	5.29%	17708.5	6.55%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e0	0.000e+00	1.0000	9777.0	15.14%	48114.7	17.81%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	0.000e+00	1.0000	408.0	0.63%	5392.5	2.00%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	0.000e+00	1.0000	17836.0	27.63%	81029.9	29.99%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	0.000e+00	1.0000	3367.0	5.22%	16270.5	6.02%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	0.000e+00	1.0000	11659.0	18.06%	57944.1	21.45%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	0.000e+00	1.0000	2184.0	3.38%	23958.1	8.87%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	0.000e+00	1.0000	2083.0	3.23%	11604.4	4.30%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e0	0.000e+00	1.0000	24336.0	37.70%	126913.7	46.98%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	0.000e+00	1.0000	2545.0	3.94%	23834.8	8.82%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	0.000e+00	1.0000	1038.0	1.61%	7389.1	2.74%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e0	0.000e+00	1.0000	32703.0	50.66%	141583.3	52.41%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	0.000e+00	1.0000	7357.0	11.40%	35656.4	13.20%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e0	0.000e+00	1.0000	7542.0	11.68%	33995.7	12.58%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	0.000e+00	1.0000	14658.0	22.70%	83497.2	30.91%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	0.000e+00	1.0000	19217.0	29.77%	100709.2	37.28%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	0.000e+00	1.0000	3699.0	5.73%	19473.9	7.21%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e0	0.000e+00	1.0000	21336.0	33.05%	109997.2	40.72%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	0.000e+00	1.0000	23293.0	36.08%	108040.0	39.99%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e0	0.000e+00	1.0000	17349.0	26.87%	92668.1	34.30%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e0	0.000e+00	1.0000	31174.0	48.29%	139686.8	51.71%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	0.000e+00	1.0000	406.0	0.63%	9190.0	3.40%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	0.000e+00	1.0000	4349.0	6.74%	42651.0	15.79%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	0.000e+00	1.0000	22469.0	34.80%	108578.1	40.19%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	0.000e+00	1.0000	1409.0	2.18%	8361.3	3.09%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	0.000e+00	1.0000	3298.0	5.11%	16405.3	6.07%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	0.000e+00	1.0000	38416.0	59.51%	187070.7	69.25%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	0.000e+00	1.0000	12981.0	20.11%	61444.8	22.74%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e0	0.000e+00	1.0000	5369.0	8.32%	27601.5	10.22%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	0.000e+00	1.0000	1814.0	2.81%	28319.7	10.48%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	0.000e+00	1.0000	7603.0	11.78%	38233.3	14.15%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	0.000e+00	1.0000	3687.0	5.71%	34497.4	12.77%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	0.000e+00	1.0000	14979.0	23.20%	67094.2	24.84%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	0.000e+00	1.0000	21614.0	33.48%	99387.2	36.79%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e0	0.000e+00	1.0000	8172.0	12.66%	39564.4	14.65%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	0.000e+00	1.0000	5658.0	8.76%	28449.4	10.53%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	0.000e+00	1.0000	18562.0	28.75%	86945.9	32.18%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e0	0.000e+00	1.0000	3802.0	5.89%	18591.3	6.88%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e0	0.000e+00	1.0000	30926.0	47.90%	144898.1	53.63%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e0	0.000e+00	1.0000	3397.0	5.26%	18440.7	6.83%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e0	0.000e+00	1.0000	9124.0	14.13%	48205.1	17.84%
SeqBias: A/T bias	WWWWWWWWWW	1e0	0.000e+00	1.0000	61791.0	95.71%	264528.2	97.92%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	0.000e+00	1.0000	11107.0	17.20%	78886.9	29.20%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e0	0.000e+00	1.0000	13547.0	20.98%	74598.5	27.61%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e0	0.000e+00	1.0000	14979.0	23.20%	72191.2	26.72%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e0	0.000e+00	1.0000	6186.0	9.58%	30245.6	11.20%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	0.000e+00	1.0000	8422.0	13.05%	40006.9	14.81%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	0.000e+00	1.0000	27543.0	42.66%	143352.9	53.06%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e0	0.000e+00	1.0000	1142.0	1.77%	15124.8	5.60%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e0	0.000e+00	1.0000	30165.0	46.72%	138144.5	51.14%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e0	0.000e+00	1.0000	31638.0	49.01%	140610.9	52.05%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e0	0.000e+00	1.0000	1991.0	3.08%	30793.5	11.40%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	0.000e+00	1.0000	6428.0	9.96%	67701.8	25.06%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	0.000e+00	1.0000	11164.0	17.29%	88056.3	32.59%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	0.000e+00	1.0000	4411.0	6.83%	38058.8	14.09%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	0.000e+00	1.0000	27963.0	43.31%	136124.4	50.39%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	0.000e+00	1.0000	1861.0	2.88%	10536.9	3.90%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e0	0.000e+00	1.0000	16414.0	25.42%	78071.3	28.90%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	0.000e+00	1.0000	3435.0	5.32%	17073.5	6.32%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	0.000e+00	1.0000	28011.0	43.39%	120874.1	44.74%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e0	0.000e+00	1.0000	22179.0	34.35%	98328.5	36.40%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e0	0.000e+00	1.0000	9605.0	14.88%	47555.7	17.60%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e0	0.000e+00	1.0000	7687.0	11.91%	39658.5	14.68%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	0.000e+00	1.0000	11452.0	17.74%	52208.7	19.33%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e0	0.000e+00	1.0000	2486.0	3.85%	27481.7	10.17%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e0	0.000e+00	1.0000	655.0	1.01%	13448.6	4.98%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e0	0.000e+00	1.0000	6191.0	9.59%	61813.7	22.88%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	896.0	1.39%	4768.1	1.76%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e0	0.000e+00	1.0000	13515.0	20.93%	74108.0	27.43%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	0.000e+00	1.0000	24878.0	38.54%	108318.3	40.09%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	0.000e+00	1.0000	1477.0	2.29%	22724.7	8.41%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	0.000e+00	1.0000	3776.0	5.85%	19016.5	7.04%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	0.000e+00	1.0000	333.0	0.52%	18937.0	7.01%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e0	0.000e+00	1.0000	10263.0	15.90%	51765.5	19.16%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	0.000e+00	1.0000	509.0	0.79%	4036.9	1.49%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e0	0.000e+00	1.0000	3546.0	5.49%	42737.5	15.82%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	0.000e+00	1.0000	16418.0	25.43%	73038.5	27.04%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	0.000e+00	1.0000	32778.0	50.77%	152169.4	56.33%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	0.000e+00	1.0000	934.0	1.45%	17661.2	6.54%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	0.000e+00	1.0000	10154.0	15.73%	76055.4	28.15%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e0	0.000e+00	1.0000	36447.0	56.46%	160950.7	59.58%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	0.000e+00	1.0000	12752.0	19.75%	62066.3	22.97%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e0	0.000e+00	1.0000	15165.0	23.49%	74715.2	27.66%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e0	0.000e+00	1.0000	2694.0	4.17%	14856.2	5.50%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e0	0.000e+00	1.0000	1839.0	2.85%	17112.8	6.33%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	0.000e+00	1.0000	1625.0	2.52%	29126.6	10.78%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	1816.0	2.81%	11465.5	4.24%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e0	0.000e+00	1.0000	16299.0	25.25%	95488.7	35.35%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	5744.0	8.90%	48010.0	17.77%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	0.000e+00	1.0000	3994.0	6.19%	57766.5	21.38%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	0.000e+00	1.0000	25297.0	39.18%	141780.0	52.48%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	0.000e+00	1.0000	17430.0	27.00%	79699.6	29.50%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	0.000e+00	1.0000	22267.0	34.49%	123483.5	45.71%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	0.000e+00	1.0000	10055.0	15.57%	53742.8	19.89%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	0.000e+00	1.0000	20050.0	31.06%	95878.1	35.49%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	598.0	0.93%	3457.2	1.28%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	0.000e+00	1.0000	5274.0	8.17%	62762.8	23.23%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	0.000e+00	1.0000	7095.0	10.99%	73410.5	27.17%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	0.000e+00	1.0000	3302.0	5.11%	16723.0	6.19%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	0.000e+00	1.0000	9348.0	14.48%	100489.7	37.20%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	0.000e+00	1.0000	12570.0	19.47%	62213.4	23.03%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e0	0.000e+00	1.0000	5076.0	7.86%	37749.2	13.97%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	0.000e+00	1.0000	3531.0	5.47%	43031.8	15.93%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	0.000e+00	1.0000	2098.0	3.25%	19431.9	7.19%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	0.000e+00	1.0000	3237.0	5.01%	20436.2	7.56%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	0.000e+00	1.0000	10839.0	16.79%	55738.4	20.63%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e0	0.000e+00	1.0000	11210.0	17.36%	49832.0	18.45%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	0.000e+00	1.0000	1542.0	2.39%	25841.9	9.57%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	0.000e+00	1.0000	2351.0	3.64%	17616.0	6.52%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e0	0.000e+00	1.0000	15124.0	23.43%	85988.4	31.83%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	0.000e+00	1.0000	5710.0	8.84%	76182.3	28.20%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	0.000e+00	1.0000	688.0	1.07%	13712.9	5.08%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e0	0.000e+00	1.0000	9345.0	14.48%	69307.1	25.65%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	0.000e+00	1.0000	562.0	0.87%	3883.3	1.44%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	0.000e+00	1.0000	834.0	1.29%	6365.5	2.36%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e0	0.000e+00	1.0000	9025.0	13.98%	43106.0	15.96%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	0.000e+00	1.0000	3327.0	5.15%	18397.3	6.81%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	0.000e+00	1.0000	11730.0	18.17%	56061.3	20.75%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	0.000e+00	1.0000	9240.0	14.31%	49507.3	18.33%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e0	0.000e+00	1.0000	9507.0	14.73%	50126.4	18.55%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	0.000e+00	1.0000	12878.0	19.95%	61570.7	22.79%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	0.000e+00	1.0000	2800.0	4.34%	50249.8	18.60%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e0	0.000e+00	1.0000	11676.0	18.09%	85543.1	31.66%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e0	0.000e+00	1.0000	2283.0	3.54%	16344.7	6.05%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	0.000e+00	1.0000	1790.0	2.77%	26958.2	9.98%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	0.000e+00	1.0000	2331.0	3.61%	39115.2	14.48%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	0.000e+00	1.0000	14297.0	22.15%	64069.8	23.72%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e0	0.000e+00	1.0000	13992.0	21.67%	67293.4	24.91%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e0	0.000e+00	1.0000	9435.0	14.61%	43132.9	15.97%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	0.000e+00	1.0000	5770.0	8.94%	32458.7	12.01%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e0	0.000e+00	1.0000	26108.0	40.44%	134995.5	49.97%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	0.000e+00	1.0000	8290.0	12.84%	71745.6	26.56%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	0.000e+00	1.0000	14650.0	22.69%	70139.0	25.96%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	0.000e+00	1.0000	4144.0	6.42%	19301.5	7.14%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	0.000e+00	1.0000	2408.0	3.73%	11959.3	4.43%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	0.000e+00	1.0000	23971.0	37.13%	129484.7	47.93%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	0.000e+00	1.0000	3005.0	4.65%	53437.9	19.78%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	0.000e+00	1.0000	1028.0	1.59%	13781.9	5.10%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	0.000e+00	1.0000	17351.0	26.88%	100939.5	37.36%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	0.000e+00	1.0000	4842.0	7.50%	25258.5	9.35%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e0	0.000e+00	1.0000	9276.0	14.37%	43511.3	16.11%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e0	0.000e+00	1.0000	26525.0	41.09%	131473.1	48.67%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	0.000e+00	1.0000	28324.0	43.87%	133145.8	49.28%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e0	0.000e+00	1.0000	2419.0	3.75%	18179.9	6.73%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	0.000e+00	1.0000	3992.0	6.18%	24101.1	8.92%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e0	0.000e+00	1.0000	3351.0	5.19%	44045.9	16.30%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	0.000e+00	1.0000	19135.0	29.64%	166940.0	61.79%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e0	0.000e+00	1.0000	28832.0	44.66%	139552.1	51.66%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e0	0.000e+00	1.0000	1234.0	1.91%	20372.8	7.54%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e0	0.000e+00	1.0000	36804.0	57.01%	174645.9	64.65%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	0.000e+00	1.0000	7540.0	11.68%	54727.6	20.26%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e0	0.000e+00	1.0000	6373.0	9.87%	29575.9	10.95%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	0.000e+00	1.0000	758.0	1.17%	14910.4	5.52%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	0.000e+00	1.0000	6012.0	9.31%	45656.6	16.90%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e0	0.000e+00	1.0000	4773.0	7.39%	22053.1	8.16%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	0.000e+00	1.0000	11288.0	17.48%	59222.2	21.92%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	0.000e+00	1.0000	15259.0	23.64%	68095.7	25.21%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	0.000e+00	1.0000	2990.0	4.63%	46814.6	17.33%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	0.000e+00	1.0000	3659.0	5.67%	48573.4	17.98%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e0	0.000e+00	1.0000	12743.0	19.74%	57361.8	21.23%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	0.000e+00	1.0000	417.0	0.65%	3260.5	1.21%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e0	0.000e+00	1.0000	2388.0	3.70%	42993.2	15.91%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e0	0.000e+00	1.0000	13288.0	20.58%	67483.3	24.98%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e0	0.000e+00	1.0000	5625.0	8.71%	26010.2	9.63%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	0.000e+00	1.0000	11464.0	17.76%	66107.8	24.47%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	0.000e+00	1.0000	13369.0	20.71%	64014.7	23.70%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	0.000e+00	1.0000	10058.0	15.58%	47742.6	17.67%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	0.000e+00	1.0000	4136.0	6.41%	31341.2	11.60%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e0	0.000e+00	1.0000	4962.0	7.69%	24156.8	8.94%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	0.000e+00	1.0000	3455.0	5.35%	26503.5	9.81%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e0	0.000e+00	1.0000	25879.0	40.09%	138333.3	51.20%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	0.000e+00	1.0000	857.0	1.33%	15754.1	5.83%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	0.000e+00	1.0000	282.0	0.44%	2155.6	0.80%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	2303.0	3.57%	13642.3	5.05%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	0.000e+00	1.0000	2470.0	3.83%	45914.5	17.00%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	0.000e+00	1.0000	2331.0	3.61%	26924.1	9.97%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	0.000e+00	1.0000	753.0	1.17%	6416.0	2.37%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	0.000e+00	1.0000	2048.0	3.17%	11597.1	4.29%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	0.000e+00	1.0000	5658.0	8.76%	48207.8	17.84%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	0.000e+00	1.0000	7795.0	12.07%	58832.4	21.78%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	0.000e+00	1.0000	1411.0	2.19%	26096.3	9.66%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e0	0.000e+00	1.0000	1280.0	1.98%	22672.5	8.39%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e0	0.000e+00	1.0000	21892.0	33.91%	105990.2	39.23%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	0.000e+00	1.0000	1648.0	2.55%	30930.5	11.45%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	0.000e+00	1.0000	14262.0	22.09%	70844.6	26.22%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e0	0.000e+00	1.0000	6221.0	9.64%	37942.5	14.04%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	0.000e+00	1.0000	9559.0	14.81%	50164.3	18.57%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e0	0.000e+00	1.0000	6919.0	10.72%	77577.1	28.72%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e0	0.000e+00	1.0000	41275.0	63.93%	176258.5	65.24%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	0.000e+00	1.0000	12163.0	18.84%	54936.4	20.34%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	0.000e+00	1.0000	25935.0	40.17%	115790.6	42.86%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	0.000e+00	1.0000	6307.0	9.77%	31540.8	11.68%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e0	0.000e+00	1.0000	41179.0	63.79%	182337.9	67.49%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	0.000e+00	1.0000	23375.0	36.21%	105014.4	38.87%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e0	0.000e+00	1.0000	14647.0	22.69%	70875.6	26.24%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	0.000e+00	1.0000	2460.0	3.81%	35575.0	13.17%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	0.000e+00	1.0000	4315.0	6.68%	20151.1	7.46%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e0	0.000e+00	1.0000	2435.0	3.77%	18739.3	6.94%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	0.000e+00	1.0000	1385.0	2.15%	24300.3	8.99%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	0.000e+00	1.0000	10135.0	15.70%	46229.3	17.11%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	0.000e+00	1.0000	809.0	1.25%	4888.2	1.81%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e0	0.000e+00	1.0000	23401.0	36.25%	119746.2	44.32%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	0.000e+00	1.0000	9456.0	14.65%	43041.4	15.93%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	0.000e+00	1.0000	8394.0	13.00%	133274.7	49.33%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	0.000e+00	1.0000	1506.0	2.33%	29868.5	11.06%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	0.000e+00	1.0000	512.0	0.79%	9496.1	3.52%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e0	0.000e+00	1.0000	1893.0	2.93%	12876.9	4.77%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	0.000e+00	1.0000	11269.0	17.46%	60742.9	22.48%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	0.000e+00	1.0000	1691.0	2.62%	8471.3	3.14%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	0.000e+00	1.0000	2276.0	3.53%	11476.6	4.25%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e0	0.000e+00	1.0000	22932.0	35.52%	120722.9	44.69%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	0.000e+00	1.0000	2842.0	4.40%	13744.1	5.09%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e0	0.000e+00	1.0000	25100.0	38.88%	125090.7	46.30%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e0	0.000e+00	1.0000	2486.0	3.85%	17678.7	6.54%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e0	0.000e+00	1.0000	6690.0	10.36%	54283.6	20.09%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e0	0.000e+00	1.0000	16780.0	25.99%	87655.0	32.45%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	0.000e+00	1.0000	8443.0	13.08%	95183.2	35.23%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	0.000e+00	1.0000	557.0	0.86%	6493.0	2.40%
SeqBias: CG bias	SSSSSSSSSS	1e0	0.000e+00	1.0000	44314.0	68.64%	202840.3	75.08%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	0.000e+00	1.0000	20164.0	31.23%	90111.3	33.36%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	0.000e+00	1.0000	162.0	0.25%	2274.6	0.84%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	0.000e+00	1.0000	1096.0	1.70%	23381.9	8.65%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	0.000e+00	1.0000	45879.0	71.07%	198061.1	73.31%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	0.000e+00	1.0000	3977.0	6.16%	50081.0	18.54%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e0	0.000e+00	1.0000	1823.0	2.82%	30395.7	11.25%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	0.000e+00	1.0000	11906.0	18.44%	56661.6	20.97%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	0.000e+00	1.0000	25.0	0.04%	531.7	0.20%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	0.000e+00	1.0000	20331.0	31.49%	91256.8	33.78%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	0.000e+00	1.0000	3489.0	5.40%	17215.0	6.37%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e0	0.000e+00	1.0000	1753.0	2.72%	21447.7	7.94%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	0.000e+00	1.0000	20491.0	31.74%	103161.0	38.19%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e0	0.000e+00	1.0000	28745.0	44.53%	134737.7	49.87%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	221.0	0.34%	2914.8	1.08%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	0.000e+00	1.0000	2651.0	4.11%	13035.2	4.83%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	0.000e+00	1.0000	239.0	0.37%	4249.8	1.57%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	0.000e+00	1.0000	9726.0	15.07%	66602.1	24.65%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	0.000e+00	1.0000	20514.0	31.78%	92563.2	34.26%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	0.000e+00	1.0000	3584.0	5.55%	31068.4	11.50%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e0	0.000e+00	1.0000	15435.0	23.91%	79266.1	29.34%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	3005.0	4.65%	22789.8	8.44%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	0.000e+00	1.0000	2199.0	3.41%	11425.1	4.23%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	0.000e+00	1.0000	1121.0	1.74%	10625.7	3.93%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e0	0.000e+00	1.0000	4424.0	6.85%	42858.2	15.86%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	0.000e+00	1.0000	48.0	0.07%	1594.3	0.59%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	0.000e+00	1.0000	1354.0	2.10%	8221.4	3.04%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e0	0.000e+00	1.0000	15577.0	24.13%	73067.7	27.05%
SeqBias: G/A bias	RRRRRRRRRR	1e0	0.000e+00	1.0000	64421.0	99.79%	270143.2	100.00%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e0	0.000e+00	1.0000	35.0	0.05%	821.7	0.30%