Information for 13-GAGTTGAGTAGT (Motif 11)

A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T
Reverse Opposite:
C T G A A G T C A C G T G T C A A G T C A G C T A G T C T C G A T C G A G T A C G C A T A T G C
p-value:1e-83
log p-value:-1.923e+02
Information Content per bp:1.927
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.7 +/- 44.1bp
Average Position of motif in Background83.7 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGTTGAGTAGT--
NNNTTGAGTGGNNN
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGTTGAGTAGT
-NNTTGAGTGNN
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTAGT-
--CTTGAGTGGCT
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAGTTGAGTAGT
GGAGGAGGTGAGAA--
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGTTGAGTAGT
TGAGTTCA-----
 A C G T A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGTTGAGTAGT-
---TTAAGTGCTT
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGAGTAGT---
ANNAGTTAATTAGTTAN
 A C G T A C G T A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGTTGAGTAGT-----
NATTTAAGTACTTANNA
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGTTGAGTAGT-
---TTRAGTGSYK
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGTTGAGTAGT
--CTYRAGTGSY
 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C