Information for 14-ACGTTGCTCG (Motif 20)

C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G
Reverse Opposite:
A T G C A C T G G T C A T C A G A G T C T G C A T G C A T G A C A C T G A C G T
p-value:1e-48
log p-value:-1.108e+02
Information Content per bp:1.746
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.7 +/- 52.4bp
Average Position of motif in Background98.2 +/- 77.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACGTTGCTCG
-CGTTGCTAT
 C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G
A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGTTGCTCG----
NCCGTTGCTANGNGN
 A C G T C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ACGTTGCTCG
----NGCTN-
 C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACGTTGCTCG----
NNCGTTGCTATGGNN
 A C G T C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTGCTCG
ACACGTGGC---
 A C G T A C G T C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ACGTTGCTCG--------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACGTTGCTCG--
CTGTTGCTAGGS
 C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACGTTGCTCG------
-KGTTGCTAGGMAACA
 C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACGTTGCTCG
TNAACGACGTCGNCCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

CREB3L4/MA1474.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACGTTGCTCG
GGTGACGTGGCN--
 A C G T A C G T A C G T A C G T C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G
T A C G T C A G A G C T A T C G T C G A A G T C T C A G A G C T C A T G C A T G G T A C T C G A A C G T A C G T