| p-value: | 1e-74 |
| log p-value: | -1.706e+02 |
| Information Content per bp: | 1.981 |
| Number of Target Sequences with motif | 53.0 |
| Percentage of Target Sequences with motif | 0.24% |
| Number of Background Sequences with motif | 1.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 83.3 +/- 59.6bp |
| Average Position of motif in Background | 77.9 +/- 15.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
RARB(var.3)/MA1552.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTCATAGCCT-
AAGGTCATGACCTT |
|
|
|
RARG(var.3)/MA1553.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTCATAGCCT-
AAGGTCATGACCTT |
|
|
|
RXRG(var.2)/MA1556.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---GTCATAGCCT-
GAGGTCATGACCTC |
|
|
|
RXRB(var.2)/MA1555.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GTCATAGCCT-
GAGGTCATGACCTC |
|
|
|
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GTCATAGCCT-
AAGATATCCTT |
|
|
|
Six3/MA0631.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GTCATAGCCT---
ANANGTGATACCCTATN |
|
|
|
PH0163.1_Six3/Jaspar
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GTCATAGCCT---
ANANGTGATACCCTATN |
|
|
|
PB0059.1_Six6_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GTCATAGCCT---
ANANNTGATACCCNATN |
|
|
|
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----GTCATAGCCT
GARTGGTCATCGCCC |
|
|
|
PH0162.1_Six2/Jaspar
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----GTCATAGCCT---
ANANGTGATACCCCATT |
|
|
|
