Information for 22-CACACHACACAC (Motif 24)

G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C
Reverse Opposite:
T C A G A C G T C T A G C A G T C T A G A C G T C A G T C T A G C G A T C T A G C A G T C A T G
p-value:1e-43
log p-value:-9.999e+01
Information Content per bp:1.668
Number of Target Sequences with motif438.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif249.1
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets95.9 +/- 55.1bp
Average Position of motif in Background100.6 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)2.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACACHACACAC
TCCAATCCACA-
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACACHACACAC----
AGCGGCACACACGCAA
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACACHACACAC
TTTGCACACGGCAC--
 A C G T A C G T A C G T A C G T G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACACHACACAC--
--NWAACCACADNN
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CACACHACACAC
CGAAGCACACAAAATA-
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CACACHACACAC---
-----NTCACACCTN
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACACHACACAC-------
CCCCAAACCACCCCCCCCCA
 A C G T G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CACACHACACAC--
------TCACACCT
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACACHACACAC-
-SSAATCCACANN
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CACACHACACAC---
----CTTCACACCTA
 G T A C G T C A G A T C G C T A G A T C G T C A T G C A G A T C G T C A G A T C T G C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A