Information for 15-GTTGAGTA (Motif 26)

A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C C G T A C T G A A G T C
p-value:1e-29
log p-value:-6.821e+01
Information Content per bp:1.957
Number of Target Sequences with motif458.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif306.6
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets101.0 +/- 53.9bp
Average Position of motif in Background104.6 +/- 63.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAGTA--
NNTTGAGTGNN
 A C G T A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTGAGTA---
-GTGAGTGNAC
 A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAGTA----
NNNTTGAGTGGNNN
 A C G T A C G T A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTGAGTA---
CTTGAGTGGCT
 A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

BACH1/MA1633.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAGTA---
NTGCTGAGTCATN
 A C G T A C G T A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C G A T C G A T A T C G T G A C G A C T C A T G G C T A A T C G A C G T T G A C T C G A A G C T T A G C

MAFK/MA0496.3/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTGAGTA----
NNTGCTGAGTCAGCN
 A C G T A C G T A C G T A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A T C G T G A C G C A T C A T G C G T A T A C G A C G T T G A C C G T A A C T G A T G C C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTGAGTA---
-TTAAGTGCTT
 A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTGAGTA--
ATTGCGCAAT
 A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTGAGTA--
CTYRAGTGSY
 A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTGAGTA---
-TTRAGTGSYK
 A C T G A G C T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T