Information for 11-AATAACTAAGAT (Motif 10)

C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T
Reverse Opposite:
C G T A C A G T A G T C A C G T A C G T C G T A A C T G A C G T A C G T C G T A C A G T A C G T
p-value:1e-104
log p-value:-2.396e+02
Information Content per bp:1.915
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets94.3 +/- 61.8bp
Average Position of motif in Background125.0 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATAACTAAGAT
GTTAACTAGN--
 C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AATAACTAAGAT
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PH0153.1_Prop1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATAACTAAGAT--
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AATAACTAAGAT
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

LMX1B/MA0703.2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AATAACTAAGAT
-TTAATTAAANT
 C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T
A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

PH0143.1_Pou2f1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AATAACTAAGAT
ATATATTAATTAAGTA
 A C G T A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A

PH0159.1_Rhox6/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AATAACTAAGAT-
NNGCATTAATTAANGCA
 A C G T A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T A C G T
C T A G C G T A A T C G T G A C T C G A G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A C T G C A T G A G T C C G T A

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AATAACTAAGAT--
NNAATTAATTAAAAANN
 A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0136.1_Phox2b/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AATAACTAAGAT-
CGGAATTAATTAATAGG
 A C G T A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T A C G T
T A G C T C A G A C T G G C T A T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A G C T C T G A A T C G A T C G

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AATAACTAAGAT--
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T C G T A G C T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G G C T A A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C