Information for 17-CAGAAGGCAAGA (Motif 16)

A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C G T A C T G A G T C T A G C A C G T C G A T A G T C C G A T A C T G
p-value:1e-78
log p-value:-1.800e+02
Information Content per bp:1.982
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets97.4 +/- 50.8bp
Average Position of motif in Background90.5 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CAGAAGGCAAGA--
---AAGGCAAGTGT
 A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGAAGGCAAGA
AAACAGAAGCAG---
 A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGAAGGCAAGA
-AAAAGTCAA--
 A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGAAGGCAAGA
GGACAGATGGCAG--
 A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGAAGGCAAGA
CACAGCAGGGG---
 A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGAAGGCAAGA
GGAACAGATGGCA---
 A C G T A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGCAAGA
AACAGATGGC----
 A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGGCAAGA
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGAAGGCAAGA
ACCAGATGGC----
 A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGCAAGA
AACAKATGGY----
 A C G T A C G T A G T C C G T A T C A G C G T A G T C A A C T G A C T G A G T C C G T A G T C A A C T G C G T A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T