Information for 22-CCWCCCTTTGTT (Motif 22)

A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T
Reverse Opposite:
C T G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G C T A G C G T A A C T G A C T G
p-value:1e-56
log p-value:-1.296e+02
Information Content per bp:1.882
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.5 +/- 29.9bp
Average Position of motif in Background28.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.2/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CCWCCCTTTGTT-
---NCCTTTGTTC
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.76
Offset:4
Orientation:forward strand
Alignment:CCWCCCTTTGTT--
----CCTTTGTTTT
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCWCCCTTTGTT--
---NNCTTTGTTNN
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CCWCCCTTTGTT
----CCWTTGTY
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CCWCCCTTTGTT--
----YCTTTGTTCC
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCWCCCTTTGTT-----
AATCCCTTTGATCTATC
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CCWCCCTTTGTT--
----CCTTTGATST
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CCWCCCTTTGTT-
---NCCATTGTTC
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCWCCCTTTGTT-----
ATTTCCTTTGATCTATA
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCWCCCTTTGTT-----
NNNTCCTTTGTTCTNNN
 A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T