Information for 19-GGAGGATTAG (Motif 24)

A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C G T A G T C A T G C A C G T A G T C A G T C
p-value:1e-48
log p-value:-1.123e+02
Information Content per bp:1.987
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets97.9 +/- 49.6bp
Average Position of motif in Background74.0 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GGAGGATTAG
AAGAGGATTAG
 A C G T A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGAGGATTAG-----
AGGGGGATTAGCTGCC
 A C G T A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GGAGGATTAG-
-GNGGATTAGN
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:GGAGGATTAG-
---GGATTAGC
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GGAGGATTAG-
-NNGGATTAGN
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GGAGGATTAG-
-VRGGATTARN
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGAGGATTAG--
AAGGGATTAGAA
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GGAGGATTAG
--NGGATTAN
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G
A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GGAGGATTAG
--RGGATTAR
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGAGGATTAG-
--GGGATTANN
 A C T G A C T G C G T A A T C G A C T G C G T A A C G T A C G T G T C A A C T G A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G