Information for 22-CGAATCGA (Motif 27)

T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A
Reverse Opposite:
A G C T A T G C A T C G T C G A C G A T A G C T A T G C A C T G
p-value:1e-17
log p-value:-3.931e+01
Information Content per bp:1.590
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif52.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets95.1 +/- 50.3bp
Average Position of motif in Background92.3 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGAATCGA---
-DGATCRATAN
 T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGAATCGA---
-TAATCGATAA
 T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGAATCGA---
-TAATCGATAA
 T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGAATCGA
AGCCAATCGG
 A C G T A C G T T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGAATCGA----
--TATCGATNAN
 T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGAATCGA----
AAAAAATCGATAAT
 A C G T A C G T T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGAATCGA-------
CGTATCGAAACCAAA
 T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAATCGA----
--AATGGAAAAT
 T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGAATCGA-
HNRAATCAAT
 A C G T T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

Isl1/MA1608.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGAATCGA-
NNCTAATGGNN
 A C G T A C G T T G A C T A C G T C G A G C T A A G C T A T G C A T C G T C G A A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T