Information for 20-GCCTGCTG (Motif 16)

A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A C T A G A G T C C G T A A T C G C T A G A T G C
p-value:1e-99
log p-value:-2.294e+02
Information Content per bp:1.878
Number of Target Sequences with motif3500.0
Percentage of Target Sequences with motif10.88%
Number of Background Sequences with motif2310.4
Percentage of Background Sequences with motif7.56%
Average Position of motif in Targets99.9 +/- 55.9bp
Average Position of motif in Background99.7 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCTG--
NNCCTGCTGNG
 A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCTG----
CCCCCTGCTGTGNN
 A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCTG--
CCCCCTGCTGTG
 A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCTG-----
TNTCCTGCTGTGNNG
 A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GCCTGCTG---
-CCTGCTGAGH
 A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCTG-----
TCNCCTGCTGNGNNN
 A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCTG-----
NNTCCTGCTGTGNNN
 A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----GCCTGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:9
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCTG--
CCYCCYGCTGDG
 A C G T A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G

ZNF317/MA1593.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCTG---
NNTCTGCTGTNA
 A C G T A T C G A G T C A T G C A C G T A C T G A G T C A C G T C T A G A C G T A C G T A C G T
C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A