Information for 22-GGCTGCGT (Motif 17)

A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
Reverse Opposite:
C G T A T A G C C T A G T A G C C G T A A T C G A G T C A T G C
p-value:1e-81
log p-value:-1.871e+02
Information Content per bp:1.802
Number of Target Sequences with motif2012.0
Percentage of Target Sequences with motif6.26%
Number of Background Sequences with motif1221.9
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets101.6 +/- 56.5bp
Average Position of motif in Background97.3 +/- 72.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGCTGCGT
NGCTN---
 A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGCTGCGT
TWGTCTGV--
 A C G T A C G T A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCTGCGT
-GCTGTG-
 A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:4
Score:0.62
Offset:-10
Orientation:forward strand
Alignment:----------GGCTGCGT---
GTTCCAAAATGGCTGCCTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCTGCGT
-GCTCCG-
 A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

MAFK/MA0496.3/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGCGT-----
NNTGCTGAGTCAGCN
 A C G T A C G T A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A T C G T G A C G C A T C A T G C G T A T A C G A C G T T G A C C G T A A C T G A T G C C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCTGCGT
-GCTTCC-
 A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCTGCGT
VBSYGTCTGG--
 A C G T A C G T A C G T A C G T A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCTGCGT
CTGTCTGG--
 A C G T A C G T A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTGCGT
GGCGCGCT
 A T C G T A C G A T G C A C G T A T C G G A T C A T C G C G A T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T