Information for 2-GCCCCCTAGTGG (Motif 2)

C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G
Reverse Opposite:
T G A C A G T C C G T A A T G C G A C T C G T A A C T G C T A G C A T G A C T G A C T G G T A C
p-value:1e-859
log p-value:-1.980e+03
Information Content per bp:1.902
Number of Target Sequences with motif1349.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif122.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets97.8 +/- 51.5bp
Average Position of motif in Background111.3 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----GCCCCCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GCCCCCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.88
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCFL/MA1102.2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCCTAGTGG
GCGCCCCCTGNN--
 A C G T A C G T C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCCTAGTGG-
NGGCCTCCCAGGGAG
 A C G T A C G T C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCCCCCTAGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

Isl1/MA1608.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCCCCTAGTGG--
---NNCTAATGGNN
 C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCCCCTAGTGG---
GGCACCCAGGGGTGC
 C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCCCCTAGTGG--
CCCCCCCGGGGGNN
 C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GCCCCCTAGTGG--
--------GTGGAT
 C A T G A G T C A G T C G T A C A G T C A G T C C G A T C T G A A T C G C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T