Information for 24-GAATATTC (Motif 22)

A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C
p-value:1e-32
log p-value:-7.588e+01
Information Content per bp:1.530
Number of Target Sequences with motif266.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif109.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets96.8 +/- 52.6bp
Average Position of motif in Background95.7 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GAATATTC
ATGAATATTC
 A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAATATTC
ATGMATATDC
 A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GAATATTC-----
ATGAATATTCATGAG
 A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GAATATTC-
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GAATATTC-
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GAATATTC
TTCTAGAACGTTC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GAATATTC-------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GAATATTC
TTCTAGAACGTTC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HSF2/MA0770.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAATATTC-----
GAANGTTCTAGAA
 A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAATATTC-----
TAGAANVTTCTAGAA
 A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A