Information for 8-WAATTMGC (Motif 6)

C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
Reverse Opposite:
A T C G A G T C C A G T G T C A C G T A C A G T A G C T G C A T
p-value:1e-338
log p-value:-7.798e+02
Information Content per bp:1.611
Number of Target Sequences with motif13433.0
Percentage of Target Sequences with motif41.76%
Number of Background Sequences with motif9569.6
Percentage of Background Sequences with motif31.32%
Average Position of motif in Targets99.9 +/- 55.8bp
Average Position of motif in Background100.8 +/- 65.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-WAATTMGC-
NTAATGAGCT
 A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

LBX1/MA0618.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-WAATTMGC
TTAATTAG-
 A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T

NOTO/MA0710.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--WAATTMGC
NNTAATTAGN
 A C G T A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:WAATTMGC
TAATTAGN
 C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----WAATTMGC----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-WAATTMGC
NTAATTAG-
 A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

LHX9/MA0701.2/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-WAATTMGC
NTAATTAG-
 A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G A C G T

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----WAATTMGC----
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C A C G T A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PAX4/MA0068.2/Jaspar

Match Rank:9
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-WAATTMGC
CTAATTAG-
 A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T

ARGFX/MA1463.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--WAATTMGC
TTTAATTAGN
 A C G T A C G T C G T A C T G A G T C A G C A T C A G T G T C A A C T G T A G C
C A G T G A C T G A C T C T G A C G T A A C G T C A G T C T G A C T A G G T C A