Information for 6-GTTGCCATGGCA (Motif 7)

C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A
Reverse Opposite:
G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A C T G A G A T C
p-value:1e-305
log p-value:-7.045e+02
Information Content per bp:1.739
Number of Target Sequences with motif702.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif107.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets100.5 +/- 49.8bp
Average Position of motif in Background94.7 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--GTTGCCATGGCA
CGGTTGCTATGGCA
 A C G T A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCATGGCA-
GGTTGCCATGGCAA
 A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCATGGCA-
NGTTGCCATGGCAA
 A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--GTTGCCATGGCA
CTGTTGCTATGGCA
 A C G T A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GTTGCCATGGCA---
GTTGCCATGGCAACM
 C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

RFX5/MA0510.2/Jaspar

Match Rank:6
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCATGGCA---
CGTTGCCATGGCAACG
 A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T A C G T A C G T
A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

RFX2/MA0600.2/Jaspar

Match Rank:7
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCATGGCA---
CGTTGCCATGGCAACG
 A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T A C G T A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GTTGCCATGGCA--
CGGTTGCCATGGCAAC
 A C G T A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

RFX4/MA0799.1/Jaspar

Match Rank:9
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GTTGCCATGGCA---
CGTTGCCATGGCAACN
 A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCCATGGCA
NNCGTTGCTATGGNN
 A C G T A C G T A C G T C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A