Information for 1-AACAGATGGHWH (Motif 1)

T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
Reverse Opposite:
C G T A C G A T C A T G T A G C G T A C C G T A C G A T T G A C A C G T A C T G A G C T A G C T
p-value:1e-500
log p-value:-1.151e+03
Information Content per bp:1.633
Number of Target Sequences with motif1346.0
Percentage of Target Sequences with motif33.44%
Number of Background Sequences with motif3232.4
Percentage of Background Sequences with motif7.39%
Average Position of motif in Targets99.4 +/- 52.2bp
Average Position of motif in Background100.4 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--AACAGATGGHWH
GGAACAGATGGCA-
 A C G T A C G T T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AACAGATGGHWH
GGACAGATGGCAG
 A C G T T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:AACAGATGGHWH
AACAKATGGY--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:AACAGATGGHWH
AACAGATGGT--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:AACAGATGGHWH
AACAGATGGC--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:AACAGATGGHWH
-ACATATGG---
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AACAGATGGHWH
ACCAGATGGC--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:8
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:AACAGATGGHWH
DMCAGATGKS--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:AACAGATGGHWH
NACATATGGN--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.87
Offset:0
Orientation:forward strand
Alignment:AACAGATGGHWH
AACATATGTT--
 T C G A T C G A A G T C C G T A A C T G G C T A C G A T A C T G A T C G G T A C G C T A G C A T
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T