Information for 17-CGTTTCCA (Motif 10)

T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A
Reverse Opposite:
A G C T C A T G A C T G T G C A C G T A C T G A G A T C A C T G
p-value:1e-22
log p-value:-5.068e+01
Information Content per bp:1.649
Number of Target Sequences with motif212.0
Percentage of Target Sequences with motif5.27%
Number of Background Sequences with motif1098.2
Percentage of Background Sequences with motif2.51%
Average Position of motif in Targets103.0 +/- 54.4bp
Average Position of motif in Background99.3 +/- 73.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CGTTTCCA-
CGTTGCTAT
 T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTCCA-----
NCCGTTGCTANGNGN
 A C G T A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTCCA-----
NNCGTTGCTATGGNN
 A C G T A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CGTTTCCA-----
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTCCA---
CTGTTGCTAGGS
 A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

RFX1/MA0509.2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGTTTCCA-----
CTGTTGCTATGGCA
 A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTTTCCA--
ATTTTCCATT
 T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CGTTTCCA---------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

NFATC4/MA1525.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGTTTCCA--
ATTTTCCATN
 T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T
C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

RFX3/MA0798.2/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTTTCCA-----
CGGTTGCTATGGCA
 A C G T T G A C C T A G G A C T G C A T A C G T G T A C G T A C T C G A A C G T A C G T A C G T A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A